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2024-05-02 14:42:23

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Xanthomonas oryzae pv. oryzae MAFF 311018, MAFF 311018

Number of genes found: 195

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Xanthomonas oryzae pv. oryzae MAFF 311018, MAFF 311018
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
XOO0008 tonB proteinchromosome CDS11184 672 + 0.638393
XOO0054 hypothetical proteinchromosome CDS52689 813 - 0.553506
XOO0059 conserved hypothetical proteinchromosome CDS58268 681 - 0.653451
XOO0074 conserved hypothetical proteinchromosome CDS79193 2466 - 0.640714
XOO0080 Hpa2 homologchromosome CDS86511 474 - 0.556962
XOO0248 outer membrane lipoproteinchromosome CDS272066 534 - 0.616105
XOO0276 lipoproteinchromosome CDS305708 1059 - 0.680831
XOO0324 D-alanine-D-alanine ligase Achromosome CDS355636 1104 + 0.641304
XOO0353 TonB-like proteinchromosome CDS381435 1023 - 0.688172
XOO0366 conserved hypothetical proteinchromosome CDS398034 435 - 0.703448
XOO0367 conserved hypothetical proteinchromosome CDS398538 489 - 0.711656
XOO0425 dolichyl-phosphate mannose synthase related proteinchromosome CDS457786 822 - 0.677616
XOO0468 dolichol-phosphate mannosyltransferasechromosome CDS507181 723 - 0.651452
XOO0469 nucleotide sugar epimerasechromosome CDS508258 966 - 0.663561
XOO0479 conserved hypothetical proteinchromosome CDS517345 1419 - 0.649049
XOO0486 conserved hypothetical proteinchromosome CDS533627 228 + 0.618421
XOO0487 conserved hypothetical proteinchromosome CDS533867 210 + 0.666667
XOO0549 conserved hypothetical proteinchromosome CDS599790 1722 + 0.670732
XOO0550 conserved hypothetical proteinchromosome CDS601676 1278 + 0.659624
XOO0551 lipopolysaccharide core biosynthesis glycosyl transferasechromosome CDS603151 825 - 0.65697
XOO0552 conserved hypothetical proteinchromosome CDS603979 1056 + 0.671402
XOO0556 phosphinothricin acetyltransferasechromosome CDS608652 522 + 0.637931
XOO0603 conserved hypothetical proteinchromosome CDS655361 696 - 0.655172
XOO0610 conserved hypothetical proteinchromosome CDS662848 558 - 0.620072
XOO0631 alanine racemasechromosome CDS684693 1101 + 0.683924
XOO0653 outer membrane proteinchromosome CDS705632 687 - 0.63901
XOO0673 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS723506 1365 + 0.665934
XOO0678 glucosamine-fructose-6-phosphateaminotransferasechromosome CDS730448 1830 + 0.645355
XOO0705 outer membrane proteinchromosome CDS757560 891 + 0.691358
XOO0710 putative sugar nucleotide epimerase/dehydratasechromosome CDS762788 1077 + 0.546889
XOO0711 putative glycosyltransferaschromosome CDS764896 927 + 0.542611
XOO0717 putative ABC transporter system integral membrane proteinchromosome CDS773084 819 - 0.474969
XOO0720 dTDP-glucose 4,6-dehydrataschromosome CDS776038 1056 + 0.598485
XOO0721 glucose-1-phosphate thymidylyltransferasechromosome CDS777149 888 + 0.56982
XOO0722 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS778033 558 + 0.596774
XOO0723 dTDP-4-dehydrorhamnose reductasechromosome CDS778587 909 + 0.642464
XOO0746 soluble lytic murein transglycosylasechromosome CDS804912 2118 + 0.664306
XOO0847 glycosyltransferasechromosome CDS923241 1113 + 0.699012
XOO0848 membrane proteinchromosome CDS924334 1335 + 0.666667
XOO0849 lipid A biosynthesis lauroyl acyltransferasechromosome CDS925902 921 - 0.64278
XOO0850 3-deoxy-D-manno-octulosonic acid transferasechromosome CDS926899 1317 + 0.649962
XOO0851 outer membrane protein RaxCchromosome CDS928488 1380 - 0.624638
XOO0880 UDP-N-acetylmuramate-L-alanine ligasechromosome CDS965529 1359 + 0.660044
XOO0891 membrane proteinchromosome CDS976275 1128 - 0.639184
XOO0937 murein hydrolase Dchromosome CDS1025423 1179 - 0.653096
XOO0956 saccharide biosynthesis regulatory proteinchromosome CDS1047618 1050 - 0.668571
XOO0968 outer membrane protein Slpchromosome CDS1057049 501 - 0.676647
XOO0972 conserved hypothetical proteinchromosome CDS1061466 1881 + 0.656034
XOO1053 penicillin-binding protein 1Achromosome CDS1146532 2430 - 0.646914
XOO1072 conserved hypothetical proteinchromosome CDS1170282 717 - 0.62622
XOO1086 TonB-like proteinchromosome CDS1185443 1317 + 0.659833
XOO1094 conserved hypothetical proteinchromosome CDS1193198 504 - 0.621032
XOO1096 hypothetical proteinchromosome CDS1194114 570 - 0.65614
XOO1190 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS1297715 1275 + 0.669804
XOO1202 nucleotidyl transferasechromosome CDS1308045 711 - 0.632911
XOO1261 beta lactamasechromosome CDS1380975 942 + 0.654989
XOO1296 peptidasechromosome CDS1418279 621 - 0.677939
XOO1320 UDP-N-acetylmuramoylalanine-D-glutamate ligasechromosome CDS1440568 1407 + 0.664534
XOO1416 OmpA family proteinchromosome CDS1541830 726 + 0.630854
XOO1444 beta-lactamasechromosome CDS1571749 1596 + 0.638471
XOO1448 outer membrane channel proteinchromosome CDS1576800 1470 + 0.662585
XOO1449 conserved hypothetical proteinchromosome CDS1578289 837 + 0.664277
XOO1458 putative Rhs-related proteinchromosome CDS1589426 4491 + 0.560232
XOO1460 putative Rhs-related proteinchromosome CDS1596200 1509 + 0.591783
XOO1514 penicillin tolerance proteinchromosome CDS1658555 951 + 0.6551
XOO1522 conserved hypothetical proteinchromosome CDS1670223 4584 + 0.626091
XOO1523 conserved hypothetical proteinchromosome CDS1675429 1803 + 0.668885
XOO1535 conserved hypothetical proteinchromosome CDS1690294 981 - 0.690112
XOO1536 conserved hypothetical proteinchromosome CDS1691781 663 - 0.651584
XOO1553 outer membrane protein P6 precursorchromosome CDS1709647 519 + 0.624277
XOO1640 penicillin-binding protein 1Bchromosome CDS1787800 2445 + 0.67771
XOO1645 TonB proteinchromosome CDS1794948 876 - 0.682648
XOO1700 beta-lactamasechromosome CDS1869956 1380 - 0.664493
XOO1709 monofunctional biosynthetic peptidoglycan transglycosylasechromosome CDS1883388 738 + 0.642276
XOO1710 glucosyl transferasechromosome CDS1884128 1047 + 0.630372
XOO1712 conserved hypothetical proteinchromosome CDS1885830 1029 - 0.631681
XOO1715 conserved hypothetical proteinchromosome CDS1889503 780 - 0.701282
XOO1748 GTP-Binding protein lepAchromosome CDS1932418 1806 + 0.621816
XOO1785 conserved hypothetical proteinchromosome CDS1970102 651 - 0.591398
XOO1809 conserved hypothetical proteinchromosome CDS1994509 1071 - 0.648926
XOO1812 cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS1996918 1296 - 0.634259
XOO1854 lipid A disaccharide synthasechromosome CDS2044544 1299 - 0.657429
XOO1855 UDP-N-acetylglucosamine acyltransferasechromosome CDS2045839 792 - 0.652778
XOO1857 UDP-3-O-(R-3-hydroxymyristoyl)-glucosamineN-acyl transferasechromosome CDS2047112 1014 - 0.658777
XOO1858 outer membrane antigenchromosome CDS2048525 2454 - 0.617359
XOO1859 conserved hypothetical proteinchromosome CDS2050975 1347 - 0.657758
XOO1889 outer membrane efflux proteinchromosome CDS2086013 1518 + 0.685771
XOO1918 putative outer membrane component of multidrug efflux pumpchromosome CDS2118020 927 - 0.656958
XOO1946 UDP-glucose dehydrogenasechromosome CDS2147699 1350 + 0.617778
XOO1986 TonB-like proteinchromosome CDS2191182 579 - 0.661485
XOO1987 conserved hypothetical proteinchromosome CDS2192010 660 - 0.707576
XOO2044 phosphinothricin N-acetyltransferasechromosome CDS2263708 540 - 0.624074
XOO2054 lipopolysaccharide core biosynthesis proteinchromosome CDS2272093 969 + 0.625387
XOO2055 epimerasechromosome CDS2273075 1908 + 0.624738
XOO2056 UTP-glucose-1-phosphate uridylyltransferasechromosome CDS2274982 894 + 0.604027
XOO2078 small conductance mechanosensitive ion channelchromosome CDS2300085 987 - 0.60689
XOO2095 conserved hypothetical proteinchromosome CDS2318026 1266 + 0.651659
XOO2101 UDP-N-acetylpyruvoylglucosamine reductasechromosome CDS2324216 1053 - 0.648623
XOO2165 RhsD proteinchromosome CDS2398398 4101 - 0.633748
XOO2173 3-deoxy-manno-octulosonate cytidylyltransferasechromosome CDS2410477 780 - 0.680769
XOO2174 lipid A 4'-kinasechromosome CDS2411548 1041 - 0.673391
XOO2214 phospholipasechromosome CDS2451363 1134 + 0.631393
XOO2249 N-acetylmuramoyl-L-alanine amidasechromosome CDS2492814 1179 - 0.658185
XOO2257 outer membrane efflux proteinchromosome CDS2506187 1485 + 0.679461
XOO2318 conserved hypothetical proteinchromosome CDS2580262 576 + 0.625
XOO2403 Probable outer-membrane lipoproteins carrier protein precursorchromosome CDS2670946 630 - 0.619048
XOO2408 hypothetical proteinchromosome CDS2678826 333 + 0.627628
XOO2409 hypothetical proteinchromosome CDS2679457 402 + 0.641791
XOO2448 nucleotide sugar transaminasechromosome CDS2720967 1110 + 0.620721
XOO2455 conserved hypothetical proteinchromosome CDS2726719 624 + 0.599359
XOO2488 conserved hypothetical proteinchromosome CDS2769268 4836 - 0.600703
XOO2496 putative cation efflux system proteinchromosome CDS2786262 753 - 0.64409
XOO2532 peptidasechromosome CDS2824711 840 + 0.645238
XOO2545 polygalacturonasechromosome CDS2836772 1671 + 0.605625
XOO2578 N-acetylmuramoyl-L-alanine amidasechromosome CDS2873047 1734 - 0.671857
XOO2603 soluble lytic murein transglycosylasechromosome CDS2903511 987 - 0.64843
XOO2619 outer membrane protein OprN precursorchromosome CDS2919562 1494 - 0.686747
XOO2653 regulator of pathogenicity factorschromosome CDS2974578 1137 + 0.646438
XOO2769 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolasechromosome CDS3120959 1149 + 0.645779
XOO2774 dihydroxydipicolinate synthasechromosome CDS3124953 909 - 0.678768
XOO2805 lipoproteinchromosome CDS3155234 774 - 0.661499
XOO2816 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS3163960 831 - 0.631769
XOO2836 hexosyltransferasechromosome CDS3187908 1113 - 0.651393
XOO2837 glycosyltransferasechromosome CDS3189017 1131 - 0.661362
XOO2843 glycosyl transferasechromosome CDS3195362 951 - 0.642482
XOO2845 aminotransferasechromosome CDS3197559 1113 - 0.631626
XOO2872 RND multidrug efflux membrane fusion protein MexC precursorchromosome CDS3239388 1113 - 0.672956
XOO2921 conserved hypothetical proteinchromosome CDS3304001 423 + 0.699764
XOO2935 polysaccharide biosynthetic proteinchromosome CDS3318637 1293 - 0.651199
XOO2979 dihydrodipicolinate synthetasechromosome CDS3380265 909 - 0.656766
XOO3003 outer membrane lipoprotein Blcchromosome CDS3402926 537 + 0.668529
XOO3008 GumM proteinchromosome CDS3409042 792 - 0.640152
XOO3013 GumH proteinchromosome CDS3414490 1143 - 0.6028
XOO3017 GumD proteinchromosome CDS3419265 1455 - 0.610997
XOO3019 GumB precursorchromosome CDS3422384 699 - 0.589413
XOO3086 FimV proteinchromosome CDS3498434 1983 - 0.694402
XOO3093 membrane-bound lytic murein transglycosylase D precursorchromosome CDS3507410 1539 - 0.661469
XOO3114 lipoproteinchromosome CDS3528615 573 + 0.664921
XOO3115 conserved hypothetical proteinchromosome CDS3529297 750 + 0.661333
XOO3134 TonB-like proteinchromosome CDS3555901 819 + 0.632479
XOO3141 lipoproteinchromosome CDS3562112 636 - 0.665094
XOO3185 large-conductance mechanosensitive channelchromosome CDS3605640 423 + 0.588652
XOO3317 putative lipoproteinchromosome CDS3779427 801 - 0.657928
XOO3329 conserved hypothetical proteinchromosome CDS3792290 627 + 0.668262
XOO3342 conserved hypothetical proteinchromosome CDS3803117 1734 + 0.66782
XOO3407 outer membrane lipoprotein precursorchromosome CDS3867631 654 - 0.695719
XOO3467 glycosyl transferasechromosome CDS3926010 1137 + 0.646438
XOO3479 non-hemolytic phospholipase Cchromosome CDS3940702 1977 - 0.632271
XOO3490 outer membrane proteinchromosome CDS3954855 1098 - 0.623862
XOO3535 organic solvent tolerance precursorchromosome CDS3996006 2442 + 0.617936
XOO3544 prolipoprotein diacylglyceryl transferasechromosome CDS4004967 891 - 0.637486
XOO3548 diacylglycerol kinasechromosome CDS4008365 381 - 0.648294
XOO3596 peptidasechromosome CDS4068771 942 - 0.656051
XOO3598 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylasechromosome CDS4070346 912 - 0.610746
XOO3601 cell division proteinchromosome CDS4074273 822 - 0.656934
XOO3602 D-alanine-D-alanine ligase Bchromosome CDS4075219 957 - 0.650993
XOO3603 UDP-N-acetylmuramate-alanine ligasechromosome CDS4076172 1434 - 0.661088
XOO3604 UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenolchromosome CDS4077602 1326 - 0.662896
XOO3606 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS4080297 1086 - 0.617864
XOO3607 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanyl ligasechromosome CDS4081372 1512 - 0.666005
XOO3608 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligasechromosome CDS4082880 1488 - 0.663979
XOO3609 penicillin-binding protein 3chromosome CDS4084364 1869 - 0.653291
XOO3611 cell division proteinchromosome CDS4086632 1044 - 0.665709
XOO3650 conserved hypothetical proteinchromosome CDS4126398 1101 - 0.64941
XOO3668 conserved hypothetical proteinchromosome CDS4143426 474 + 0.622363
XOO3693 HmsR proteinchromosome CDS4171719 1254 + 0.629984
XOO3696 glucosamine-fructose-6-phosphateaminotransferasechromosome CDS4175151 1029 - 0.659864
XOO3727 tail-specific proteasechromosome CDS4212050 2184 - 0.630495
XOO3734 penicillin-binding protein 6chromosome CDS4220937 1206 - 0.644279
XOO3735 rare lipoprotein Achromosome CDS4222643 1416 - 0.673729
XOO3736 membrane-bound lytic transglycosylasechromosome CDS4224055 1140 - 0.654386
XOO3738 conserved hypothetical proteinchromosome CDS4226934 1275 - 0.418824
XOO3745 penicillin-binding protein 2chromosome CDS4236969 2061 - 0.672974
XOO3746 rod shape-determining proteinchromosome CDS4239033 486 - 0.658436
XOO3747 rod shape-determining proteinchromosome CDS4239515 1347 - 0.702301
XOO3775 outer membrane lipoproteinchromosome CDS4268784 603 + 0.626866
XOO3777 conserved hypothetical proteinchromosome CDS4271019 801 + 0.639201
XOO3782 periplasmic glucan biosynthesis proteinchromosome CDS4275960 1938 - 0.664087
XOO3863 glycosyltransferasechromosome CDS4367162 810 + 0.622222
XOO3875 D-alanyl-D-alanine dipeptidasechromosome CDS4376008 747 - 0.633199
XOO3876 N-acetylmuramoyl-L-alanine amidasechromosome CDS4376847 807 - 0.654275
XOO3877 conserved hypothetical proteinchromosome CDS4377877 1413 + 0.648974
XOO3878 chloromuconate cycloisomerasechromosome CDS4379286 1098 + 0.631148
XOO3957 membrane fusion protein precursorchromosome CDS4456853 1245 + 0.662651
XOO3985 NAD(P)H steroid dehydrogenasechromosome CDS4492665 1011 + 0.646884
XOO4024 conserved hypothetical proteinchromosome CDS4537647 948 + 0.722574
XOO4060 putative outer membrane proteinchromosome CDS4578535 1782 + 0.63468
XOO4080 oxidoreductasechromosome CDS4604253 879 + 0.684869
XOO4179 conserved hypothetical proteinchromosome CDS4727393 288 + 0.611111
XOO4180 conserved hypothetical proteinchromosome CDS4727677 261 + 0.632184
XOO4250 ABC transporter amino acid permeasechromosome CDS4806074 1470 - 0.643537
XOO4292 methyltransferase gidBchromosome CDS4851962 639 + 0.683881
XOO4322 carboxyl-terminal proteasechromosome CDS4883957 1524 - 0.674541
XOO4323 conserved hypothetical proteinchromosome CDS4885585 1236 - 0.667476
XOO4338 conserved hypothetical proteinchromosome CDS4903351 624 + 0.668269