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2024-05-05 20:37:45

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Bordetella avium 197N, 197N

Number of genes found: 180

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Bordetella avium 197N, 197N
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BAV3272 putative lipopolysaccharide core biosynthesis glycosyl transferasechromosome CDS3557162 1056 - 0.625947
NA BAV2503 Putative mechanosensitive proteinchromosome CDS2704774 2352 + 0.626276
NA BAV1812 outer membrane efflux proteinchromosome CDS1900876 1419 + 0.649753
NA BAV0846 probable D-alanyl-D-alanine carboxypeptidasechromosome CDS891636 1452 + 0.652893
NA BAV2639 putative capsular polysaccharide export proteinchromosome CDS2853193 1095 + 0.668493
NA BAV2493 putative lipoproteinchromosome CDS2689237 684 + 0.602339
NA BAV0855 putative lytic transglycosylasechromosome CDS900183 825 + 0.619394
NA BAV0712 adhesinchromosome CDS737114 9945 - 0.619507
NA BAV1942 putative membrane proteinchromosome CDS2041982 2154 - 0.63324
NA BAV1656 putative adhesin/virulence factorchromosome CDS1737980 702 + 0.588319
NA BAV0514 putative O-antigen biosynthesis glycosyltranferasechromosome CDS531009 1110 + 0.656757
NA BAV0516 putative O-antigen biosynthesis glycosyltransferasechromosome CDS534048 1101 + 0.663942
NA BAV2608 putative phospholipasechromosome CDS2815389 1287 + 0.630925
NA BAV0880 putative exported peptidasechromosome CDS928543 846 + 0.641844
NA BAV2266 putative membrane proteinchromosome CDS2443737 1515 - 0.646205
NA BAV0681 putative dihydrodipicolinate synthasechromosome CDS704562 945 + 0.607407
NA BAV0535 putative outer membrane lipoproteinchromosome CDS557228 585 + 0.704274
NA BAV2812 multidrug efflux outer membrane lipoproteinchromosome CDS3045900 1365 - 0.648352
NA BAV1953 putative exported proteinchromosome CDS2087769 579 + 0.62867
NA BAV2964 putative peptidasechromosome CDS3221363 1416 + 0.621469
NA BAV2649 putative capsular polysaccharide biosynthesis proteinchromosome CDS2865459 1299 - 0.598152
NA BAV1890 aspartate racemasechromosome CDS1985767 732 + 0.632514
NA BAV1113 putative N-acetylmuramoyl-L-alanine amidasechromosome CDS1191150 783 - 0.62963
NA BAV1151 conserved hypothetical proteinchromosome CDS1228197 834 - 0.646283
NA BAV0756 choloylglycine hydrolasechromosome CDS793740 1074 + 0.603352
NA BAV2646 putative capsular polysaccharide biosynthesis glycosyl transferasechromosome CDS2861059 1194 - 0.644054
NA BAV0692 putative nucleotidyl transferasechromosome CDS713630 675 - 0.697778
NA BAV1946 outer membrane proteinchromosome CDS2078481 1602 - 0.623595
NA BAV2636 capsular polysaccharide biosynthesis glucosyltransferasechromosome CDS2849487 1416 + 0.620057
NA BAV2235 lipopolysaccharide core biosynthesis glycosyl transferasechromosome CDS2408027 1110 - 0.627928
NA BAV0072 penicillin-binding protein 1Achromosome CDS66125 2445 - 0.616769
NA BAV2238 lipopolysaccharide core biosynthesis glycosyl transferasechromosome CDS2410733 1101 - 0.62307
NA BAV2647 putative capsular polysaccharide biosynthesis glycosyl transferasechromosome CDS2862260 933 - 0.64523
NA BAV3159 putative lipoproteinchromosome CDS3435162 888 + 0.643018
NA BAV1551 Putative filamentous hemagglutinin/adhesinchromosome CDS1609779 6042 + 0.634558
NA BAV0324 multidrug efflux system outer membrane proteinchromosome CDS336833 1491 - 0.668008
NA BAV0790 putative cell wall degrading peptidasechromosome CDS828090 753 + 0.629482
NA BAV3078 Putative exopolysaccharide biosynthesis glycosyl transferasechromosome CDS3352985 582 - 0.628866
NA BAV2837 putative membrane-associated sulfatasechromosome CDS3080229 1911 - 0.608059
NA BAV2805 glycosyl transferasechromosome CDS3034730 939 - 0.614483
NA BAV1655 multidrug efflux system outer membrane proteinchromosome CDS1736327 1464 + 0.627732
NA BAV0318 acetyltransferasechromosome CDS329758 537 + 0.633147
NA BAV0122 putative O-antigen polymerasechromosome CDS129071 1263 - 0.608868
NA BAV1145 lipoproteinchromosome CDS1220112 657 - 0.61035
NA BAV0086 Putative glycosyl transferasechromosome CDS84883 951 + 0.513144
NA BAV0244 putative exported peptidasechromosome CDS250809 1587 + 0.657215
NA BAV0510 putative O-antigen biosynthesis glycosyltransferasechromosome CDS526137 1104 + 0.627717
NA BAV2434 putative lipoproteinchromosome CDS2625241 426 + 0.612676
NA BAV0351 putative exported proteinchromosome CDS365642 456 + 0.596491
NA BAV3079 Putative O-acyltransferasechromosome CDS3353569 648 - 0.54321
NA BAV0526 putative sulfatasechromosome CDS545818 1923 + 0.616745
NA BAV3040 multidrug efflux system outer membrane proteinchromosome CDS3304405 1437 - 0.644398
NA BAV2483 cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS2677364 1269 - 0.596533
NA BAV2018 putative glycosyl transferasechromosome CDS2161003 1020 + 0.585294
NA BAV2642 putative capsular polysaccharide biosynthesis proteinchromosome CDS2856776 939 + 0.669862
NA BAV1217 adhesin (partial)chromosome CDS1311277 1671 - 0.629563
NA BAV1742 putative surface antigenchromosome CDS1828996 2379 + 0.576713
NA BAV0736 probable N-acetyltransferasechromosome CDS772086 543 + 0.626151
NA BAV3087 putative O-antigen export ABC transporter,putative permease proteinchromosome CDS3359453 771 - 0.579767
NA BAV1636 putative mechanosensitive ion channel forming proteinchromosome CDS1709921 1320 + 0.6
NA BAV2190 outer membrane multidrug efflux proteinchromosome CDS2351034 1425 + 0.622456
NA BAV0475 putative surface antigenchromosome CDS480012 1854 + 0.652104
NA BAV1250 putative sugar epimerase/dehydratasechromosome CDS1344564 1068 - 0.581461
NA BAV3077 Putative exopolysaccharide biosynthesis aminotransferasechromosome CDS3351837 1152 - 0.661458
NA BAV2870 putative exported peptidasechromosome CDS3120440 984 - 0.638211
NA BAV3003 putative membrane proteinchromosome CDS3268705 873 + 0.65063
NA BAV1238 putative lytic murein transglycosylasechromosome CDS1334233 1218 + 0.612479
NA BAV2575 putative membrane proteinchromosome CDS2784470 834 - 0.621103
NA BAV0160 putative glycosyl transferasechromosome CDS163525 1038 + 0.648362
NA BAV0121 Putative filamentous surface proteinchromosome CDS127293 1743 + 0.58864
NA BAV2025 outer membrane multidrug efflux proteinchromosome CDS2167087 1440 + 0.663889
NA BAV3189 putative exported proteinchromosome CDS3465693 519 + 0.576108
NA BAV1979 putative peptidoglycan-binding peptidasechromosome CDS2122208 852 - 0.622066
NA BAV0559 putative exported proteinchromosome CDS582825 2481 + 0.622733
NA BAV2460 multidrug efflux system outer membrane proteinchromosome CDS2653789 1527 - 0.630648
NA BAV2847 putative exported proteinchromosome CDS3093303 2064 - 0.626938
NA BAV2638 putative capsular polysaccharide biosynthesis glucosyltransferasechromosome CDS2852190 816 - 0.651961
NA BAV1246 glycosyl transferasechromosome CDS1341475 972 - 0.50823
NA BAV1008 putative multidrug efflux pumpchromosome CDS1079093 1482 - 0.669366
algA BAV2635 capsular polysaccharide biosynthesis protein [includes: mannose-6-phosphate isomerase and mannose-1-phosphate guanylyl transferasechromosome CDS2848061 1419 + 0.649753
alnB BAV2416 alanine racemase, catabolicchromosome CDS2607159 1125 - 0.652444
amiC BAV0731 N-acetylmuramoyl-L-alanine amidasechromosome CDS766474 1260 - 0.649206
ampD BAV0449 N-acetylmuramoyl-L-alanine amidasechromosome CDS450383 612 - 0.669935
arnT BAV2927 putative 4-amino-4-deoxy-l-arabinose lipid A transferasechromosome CDS3183615 1587 - 0.597354
asmB BAV2873 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylasechromosome CDS3122286 924 - 0.595238
aut BAV3073 putative transferasechromosome CDS3347977 489 - 0.625767
bcsA BAV2631 cellulose synthase catalytic subunit [UDP-forming]chromosome CDS2843250 2202 - 0.603996
betT BAV2057 high-affinity choline transport proteinchromosome CDS2198117 1962 + 0.615698
blc BAV0354 outer membrane lipoproteinchromosome CDS368756 558 - 0.637993
bplC BAV0096 lipopolysaccharide biosynthesis proteinchromosome CDS97405 1101 - 0.613079
bplE BAV0095 probable glycosyl transferasechromosome CDS96191 1197 - 0.603175
bplF BAV0094 lipopolysaccharide biosynthesis proteinchromosome CDS94868 1179 - 0.621713
bplG BAV0093 probable sugar transferasechromosome CDS94272 600 - 0.595
bplH BAV0092 putative glycosyl transferasechromosome CDS92974 1209 - 0.604632
bplL BAV0090 putative sugar epimerase/dehydratasechromosome CDS89625 1929 - 0.587869
cfa BAV2080 putative cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS2219636 1221 - 0.628174
cphA1 BAV1232 cyanophycin synthetasechromosome CDS1323967 2574 - 0.651515
cphA2 BAV1233 cyanophycin synthetasechromosome CDS1326609 2613 - 0.631458
ctpA BAV0245 carboxy-terminal processing proteasechromosome CDS252417 1455 + 0.621993
cutE BAV0839 putative apolipoprotein N-acyltransferasechromosome CDS882572 1593 + 0.653484
dacC BAV0135 penicillin-binding proteinchromosome CDS140593 1260 + 0.627778
dapA1 BAV0110 dihydrodipicolinate synthasechromosome CDS114744 930 + 0.639785
dapA2 BAV2594 dihydrodipicolinate synthasechromosome CDS2804046 906 - 0.631347
dapA3 BAV2708 dihydrodipicolinate synthasechromosome CDS2932575 888 + 0.648649
ddl BAV2877 D-alanine--D-alanine ligasechromosome CDS3126889 954 - 0.614256
dgkA BAV0577 diacylglycerol kinasechromosome CDS599681 393 - 0.620865
dltB BAV2988 putative D-alanine transferasechromosome CDS3255058 1128 - 0.587766
ecfE BAV1741 inner membrane proteasechromosome CDS1827609 1335 + 0.629963
excC BAV2916 peptidoglycan-associated lipoproteinchromosome CDS3173532 498 + 0.61245
fhaB BAV1966 Filamentous hemagglutinin/adhesinchromosome CDS2102421 7866 - 0.58327
firA BAV1744 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferasechromosome CDS1832114 1086 + 0.623389
ftsI BAV2884 penicillin-binding proteinchromosome CDS3137000 1734 - 0.601499
ftsQ BAV2876 cell division proteinchromosome CDS3126056 825 - 0.626667
gcpE BAV2344 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthasechromosome CDS2525900 1287 - 0.618493
gidB BAV0002 glucose inhibited division protein Bchromosome CDS1911 675 + 0.583704
glmS BAV3270 glucosamine--fructose-6-phosphate aminotransferase [isomerizing]chromosome CDS3554692 1833 - 0.614294
glmU BAV3275 bifunctional GlmU protein [includes: UDP-N-acetylglucosamine pyrophosphorylase and glucosamine-1-phosphate n-acetyltransferase]chromosome CDS3560972 1374 - 0.642649
gtaB BAV2767 UTP--glucose-1-phosphate uridylyltransferasechromosome CDS2992249 840 + 0.613095
gtrB BAV2928 bactoprenol glucosyl transferasechromosome CDS3185198 1059 - 0.583569
hagB1 BAV2825 putative hemolysin/hemagglutinchromosome CDS3064793 4068 + 0.567847
hagB2 BAV2819 putative hemolysin/hemagglutinchromosome CDS3055039 4056 - 0.562623
hldD BAV1359 ADP-L-glycero-D-manno-heptose-6-epimerasechromosome CDS1430894 999 + 0.58959
hldE' BAV1358 putative D-beta-d-heptose 7-phosphate kinasechromosome CDS1429956 942 + 0.646497
imp BAV0694 putative organic solvent tolerance proteinchromosome CDS715508 2394 + 0.619883
ispH BAV2403 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (putative drug tolerance protein)chromosome CDS2595356 987 - 0.612969
kdsA BAV2851 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS3097600 849 + 0.597173
kdsB BAV2102 3-deoxy-manno-octulosonate cytidylyltransferasechromosome CDS2249228 825 + 0.646061
kdsD BAV3114 arabinose 5-phosphate isomerasechromosome CDS3389500 987 + 0.674772
kdtA BAV0126 3-deoxy-D-manno-octulosonic-acid transferasechromosome CDS133163 1272 + 0.648585
lgt BAV2897 prolipoprotein diacylglyceryl transferasechromosome CDS3155883 795 + 0.578616
lolA BAV2694 outer-membrane lipoprotein carrier proteinchromosome CDS2915390 630 - 0.612698
lpxA BAV1746 acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferasechromosome CDS1833736 795 + 0.598742
lpxB BAV1747 lipid-A-disaccharide synthasechromosome CDS1834527 1188 + 0.613636
mltA BAV3231 membrane-bound lytic murein transglycosylasechromosome CDS3509677 1281 - 0.67057
mltB BAV1362 membrane-bound lytic murein transglycosylase Bchromosome CDS1433406 1140 - 0.629825
mltD BAV2937 membrane-bound lytic murein transglycosylase Dchromosome CDS3194875 1401 + 0.611706
mpl BAV3000 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligasechromosome CDS3264742 1371 + 0.632385
mraW BAV2886 S-adenosyl-methyltransferasechromosome CDS3139005 1068 - 0.634831
mraY BAV2882 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS3133025 1134 - 0.591711
mrcA BAV2038 penicillin-binding proteinchromosome CDS2182625 2517 + 0.632896
mrdA BAV3173 penicillin-binding proteinchromosome CDS3447090 1899 - 0.618747
mreC BAV3175 rod shape-determining proteinchromosome CDS3449541 885 - 0.629379
mreD BAV3174 rod shape-determining proteinchromosome CDS3449000 507 - 0.61144
mscL BAV3328 large-conductance mechanosensitive channelchromosome CDS3613573 447 - 0.534676
mtgA BAV3005 monofunctional biosynthetic peptidoglycan transglycosylasechromosome CDS3270514 723 + 0.589212
murA BAV3312 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS3601666 1266 + 0.638231
murA BAV2009 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS2152781 1302 + 0.619816
murB BAV2727 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS2952406 1017 - 0.628319
murC BAV2878 UDP-N-acetylmuramate--alanine ligasechromosome CDS3127839 1407 - 0.633262
murD BAV2881 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS3131502 1527 - 0.652259
murE BAV2883 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligasechromosome CDS3134184 2820 - 0.635106
murG BAV2879 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome CDS3129242 1074 - 0.647114
ompA BAV1346 outer membrane protein Achromosome CDS1416012 585 - 0.608547
ompH BAV1743 outer membrane proteinchromosome CDS1831559 549 + 0.588342
ompW BAV3303 outer membrane proteinchromosome CDS3595033 636 + 0.627358
pbpC BAV2089 penicillin-binding protein 1Cchromosome CDS2234334 2124 - 0.646893
pbpG BAV0908 probable D-alanyl-D-alanine carboxypeptidasechromosome CDS960624 1230 - 0.626829
plcN1 BAV1084 non-hemolytic phospholipase Cchromosome CDS1159522 2082 - 0.633525
plcN2 BAV1803 non-hemolytic phospholipase Cchromosome CDS1889792 2172 - 0.633978
rfaC BAV0125 lipopolysaccharide heptosyltransferase-1chromosome CDS132146 1008 + 0.625992
rfaF BAV2230 ADP-heptose--LPS heptosyltransferase IIchromosome CDS2404136 969 + 0.676987
rfaG BAV2233 lipopolysaccharide core biosynthesis glycosyl proteinchromosome CDS2406160 1107 - 0.652213
rfbA BAV1244 glucose-1-phosphate thymidylyltransferase 1chromosome CDS1340052 879 - 0.574516
rfbB BAV1243 dTDP-glucose 4,6-dehydratasechromosome CDS1338843 1056 - 0.587121
rfbC BAV0124 dTDP-6-deoxy-D-glucose-3,5-epimerasechromosome CDS131458 573 + 0.593368
rfbD BAV0123 dTDP-4-dehydrorhamnose reductasechromosome CDS130553 876 + 0.636986
rfbF BAV1255 glucose-1-phosphate cytidylyltransferasechromosome CDS1348881 786 - 0.525445
rfbG BAV1254 CDP-glucose 4,6-dehydratasechromosome CDS1347809 1086 - 0.601289
rkpK BAV3273 UDP-glucose 6-dehydrogenasechromosome CDS3558214 1323 - 0.622071
slt BAV0168 soluble lytic murein transglycosylase precursorchromosome CDS170098 2082 + 0.635927
slyB BAV2992 putative outer membrane lipoproteinchromosome CDS3257976 498 - 0.65261
tolC BAV3072 outer membrane proteinchromosome CDS3346643 1326 + 0.653092
tonB BAV2120 siderophore-mediated iron transport proteinchromosome CDS2267087 804 - 0.619403
vacJ BAV3307 putative intercellular spreading lipoproteinchromosome CDS3598243 783 + 0.63857
waaE BAV2236 lipopolysaccharide core biosynthesis glycosyl transferasechromosome CDS2409133 759 - 0.617918
wbnL BAV0518 putative O-antigen biosynthesis glycosyltransferasechromosome CDS536283 1134 + 0.655203
wbpO BAV0511 polysaccharide biosynthesis proteinchromosome CDS527330 1275 + 0.589804
wbpP BAV0512 UDP-N-acetylglucosamine C4 epimerasechromosome CDS528626 1026 + 0.598441
wbpT BAV0517 putative O-antigen biosynthesis glycosyltransferasechromosome CDS535156 1131 + 0.659593
wssH BAV2624 cellulose acetylase subunitchromosome CDS2830669 1410 - 0.605674