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2024-05-01 20:57:35

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Treponema pallidum subsp. pallidum str. Nichols, Nichols

Number of genes found: 66

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Treponema pallidum subsp. pallidum str. Nichols, Nichols
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
TP0029 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (murA)chromosome CDS36911 1278 + 0.500782
TP0043 soluble lytic transglycosylase, putativechromosome CDS50418 2133 + 0.516174
TP0048 conserved hypothetical proteinchromosome CDS57045 432 - 0.518519
TP0049 conserved hypothetical proteinchromosome CDS57498 1029 - 0.538387
TP0077 capsular polysaccharide biosynthesis protein (cap5D)chromosome CDS84254 1617 + 0.502783
TP0078 spore coat polysaccharide biosynthesis protein (spsC)chromosome CDS85875 1239 + 0.500404
TP0090 UDP-N-acetylmuramate dehydrogenase (murB)chromosome CDS98743 1065 - 0.577465
TP0106 carnitine transporter, putativechromosome CDS118831 1533 - 0.491846
TP0107 licC protein (licC)chromosome CDS120344 1578 - 0.470215
TP0155 conserved hypothetical proteinchromosome CDS177129 1116 + 0.523297
TP0221 D,D-carboxypeptidase, putativechromosome CDS226177 783 + 0.559387
TP0247 N-acetylmuramoyl-L-alanine amidase (amiA)chromosome CDS259822 1074 + 0.482309
TP0252 apolipoprotein N-acyltransferase, putativechromosome CDS263236 1641 + 0.543571
TP0253 conserved hypothetical proteinchromosome CDS264867 414 + 0.519324
TP0267 conserved hypothetical proteinchromosome CDS283557 366 + 0.513661
TP0275 UDP-N-acetyl-D-mannosamine transferase, putativechromosome CDS290810 750 - 0.509333
TP0277 carboxyl-terminal protease (ctp)chromosome CDS292595 1347 - 0.504826
TP0288 spore coat polysaccharide biosynthesis protein (spsF)chromosome CDS301183 948 + 0.523207
TP0292 outer membrane protein (tpn50)chromosome CDS305554 1254 + 0.498405
TP0326 outer membrane proteinchromosome CDS344276 2562 + 0.521858
TP0327 cationic outer membrane protein (ompH)chromosome CDS346894 519 + 0.510597
TP0333 conserved hypothetical proteinchromosome CDS355657 693 + 0.502164
TP0341 UDP-N-acetylmuramate--alanine ligase (murC)chromosome CDS363501 1446 + 0.497925
TP0345 phospho-N-acetylmuramoyl-pentapeptide-transferas e(mraY)chromosome CDS370034 1092 + 0.507326
TP0384 conserved hypothetical proteinchromosome CDS408615 1140 + 0.595614
TP0386 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase (murF)chromosome CDS410125 1380 + 0.52029
TP0388 cell division protein (ftsQ)chromosome CDS412633 816 + 0.458333
TP0406 glutamate racemase (murI)chromosome CDS430026 807 + 0.531599
TP0417 apolipoprotein N-acyltransferase (cutE)chromosome CDS444035 1680 - 0.57381
TP0435 lipoprotein, 17 kDa (tpp17)chromosome CDS462025 471 - 0.558386
TP0440 spore coat polysaccharide biosynthesis protein, putativechromosome CDS465732 1152 + 0.563368
TP0444 conserved hypothetical proteinchromosome CDS470313 1029 + 0.555879
TP0498 rod shape-determining protein (mreC)chromosome CDS532928 864 + 0.481481
TP0499 rod shape-determining protein (mreD)chromosome CDS533788 507 + 0.431953
TP0500 penicillin-binding protein (pbp-1)chromosome CDS534295 1875 + 0.484267
TP0510 GTP-binding membrane protein (lepA)chromosome CDS545141 1818 - 0.522002
TP0515 conserved hypothetical proteinchromosome CDS553338 2976 + 0.421371
TP0523 UDP-N-glucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (murG)chromosome CDS563494 1155 - 0.529004
TP0547 penicillin tolerance protein (lytB)chromosome CDS590405 1131 - 0.64191
TP0562 spore coat polysaccharide biosynthesis protein (spsE)chromosome CDS609512 1137 + 0.5708
TP0566 alginate O-acetylation protein (algI)chromosome CDS614198 1488 - 0.454973
TP0580 conserved hypothetical integral membrane proteinchromosome CDS630304 1290 + 0.468992
TP0582 conserved hypothetical integral membrane proteinchromosome CDS632263 1488 + 0.508065
TP0600 zinc protease, putativechromosome CDS651571 1353 - 0.482631
TP0623 membrane-bound lytic murein transglycosylase D (dniR)chromosome CDS676479 2340 + 0.601282
TP0624 conserved hypothetical proteinchromosome CDS678822 1431 + 0.549965
TP0670 D-alanine--D-alanine ligase (ddlA)chromosome CDS734274 1191 - 0.544081
TP0681 alanine racemase (alr)chromosome CDS745018 1074 - 0.565177
TP0702 conserved hypothetical proteinchromosome CDS767339 537 - 0.603352
TP0705 penicillin-binding protein (pbp-2)chromosome CDS770833 2655 - 0.555556
TP0706 conserved hypothetical proteinchromosome CDS773784 927 - 0.564186
TP0760 penicillin-binding protein (pbp-3)chromosome CDS822226 1959 + 0.542624
TP0782 T. pallidum predicted coding region TP0782chromosome CDS848908 444 - 0.515766
TP0800 serine-type D-Ala-D-Ala carboxypeptidase (dacC)chromosome CDS866831 1473 + 0.578411
TP0822 conserved hypothetical proteinchromosome CDS889777 906 - 0.55298
TP0851 T. pallidum predicted coding region TP0851chromosome CDS920441 2175 + 0.470345
TP0852 prolipoprotein diacylglyceryl transferase (lgt)chromosome CDS922644 999 - 0.484484
TP0861 glucosamine-fructose-6-phosphate aminotransferase (glmS)chromosome CDS937274 1908 - 0.568658
TP0864 conserved hypothetical proteinchromosome CDS941689 1641 - 0.555759
TP0903 UDP-N-acetylmuramoylalanine--D-glutamate ligase (murD)chromosome CDS984880 1599 + 0.577236
TP0933 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (murE)chromosome CDS1013498 1623 - 0.513247
TP0946 glucose-inhibited division protein B (gidB)chromosome CDS1027836 669 + 0.572496
TP0959 T. pallidum predicted coding region TP0959chromosome CDS1041101 390 - 0.54359
TP0965 membrane fusion protein, putativechromosome CDS1046542 963 - 0.531672
TP0978 signal peptidase II (lsp)chromosome CDS1061478 594 + 0.5
TP0993 rare lipoprotein A, putativechromosome CDS1077304 957 - 0.582027