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2024-05-18 17:31:32

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Fusobacterium nucleatum subsp. nucleatum ATCC 25586, ATCC 25586

Number of genes found: 116

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Fusobacterium nucleatum subsp. nucleatum ATCC 25586, ATCC 25586
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
FN0016 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS653770 657 + 0.2207
FN0022 Hypothetical proteinRecName: Full=Putative septation protein SpoVG; chromosome CDS660930 282 + 0.301418
FN0060 D-alanyl-D-alanine carboxypeptidaseSubName: Full=D-alanyl-D-alanine carboxypeptidase; EC=3.4.16.4; chromosome CDS695914 1107 + 0.277326
FN0068 Lipoprotein signal peptidaseRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; chromosome CDS707448 498 + 0.283133
FN0253 Outer membrane proteinSubName: Full=Outer membrane protein; chromosome CDS874650 474 + 0.2827
FN0279 LipoproteinSubName: Full=Lipoprotein; chromosome CDS905787 783 - 0.288633
FN0335 Outer membrane porin FSubName: Full=Outer membrane porin F; chromosome CDS969247 519 - 0.306358
FN0378 UDP-glucose 4-epimeraseSubName: Full=UDP-glucose 4-epimerase; EC=5.1.3.2; chromosome CDS1009312 975 - 0.299487
FN0383 LipopolysaccharideN-acetylglucosaminyltransferaseSubName: Full=Lipopolysaccharide N-acetylglucosaminyltransferase; chromosome CDS1014288 1422 + 0.266526
FN0385 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1018060 921 + 0.255157
FN0394 Outer membrane proteinSubName: Full=Outer membrane protein; chromosome CDS1032467 741 + 0.269906
FN0406 Alanine racemase, biosyntheticRecName: Full=Alanine racemase; EC=5.1.1.1; chromosome CDS1043600 1065 - 0.266667
FN0452 Glucosamine--fructose-6-phosphate aminotransferase (isomerizing)RecName: Full=Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; EC=2.6.1.16; AltName: Full=D-fructose-6-phosphate amidotransferase; AltName: Full=GFAT; AltName: Full=Glucosamine-6-phosphate synthase; AltName: Full=Hexosephosphate aminotransferase; AltName: Full=L-glutamine--D-fructose-6-phosphate amidotransferase; chromosome CDS1095839 1824 + 0.288925
FN0468 murein hydrolase export regulatorSubName: Full=Murein hydrolase export regulator; chromosome CDS1113360 693 + 0.294372
FN0477 Cell wall endopeptidase family M23/M37SubName: Full=Cell wall endopeptidase family M23/M37; chromosome CDS1125012 966 + 0.324017
FN0489 Prolipoprotein diacylglyceryl transferaseRecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; chromosome CDS1134649 867 - 0.288351
FN0491 Alanine racemaseRecName: Full=Alanine racemase; EC=5.1.1.1; chromosome CDS1136329 1080 - 0.262037
FN0516 Acriflavin resistance protein ESubName: Full=Acriflavin resistance protein E; chromosome CDS1167093 1074 - 0.266294
FN0517 Outer membrane protein tolCSubName: Full=Outer membrane protein tolC; chromosome CDS1168176 1350 - 0.266667
FN0525 Penicillin-binding proteinSubName: Full=Penicillin-binding protein; chromosome CDS1179735 2196 - 0.297359
FN0542 Beta 1,4 glucosyltransferaseSubName: Full=Beta 1,4 glucosyltransferase; chromosome CDS1195363 792 + 0.267677
FN0543 Lipopolysaccharide heptosyltransferase-1SubName: Full=Lipopolysaccharide heptosyltransferase-1; chromosome CDS1196126 1038 + 0.267823
FN0544 ADP-heptose:LPS heptosyltransferase IISubName: Full=ADP-heptose:LPS heptosyltransferase II; chromosome CDS1197160 1029 + 0.263362
FN0546 Lipopolysaccharide core biosynthesis protein rfaQSubName: Full=Lipopolysaccharide core biosynthesis protein rfaQ; chromosome CDS1198779 1008 + 0.244048
FN0580 Penicillin-binding proteinSubName: Full=Penicillin-binding protein; chromosome CDS1235070 2175 + 0.268506
FN0581 Lipoprotein releasing system transmembrane protein lolESubName: Full=Lipoprotein releasing system transmembrane protein lolE; chromosome CDS1237248 1170 + 0.274359
FN0593 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylaseRecName: Full=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; EC=3.5.1.-; AltName: Full=UDP-3-O-acyl-GlcNAc deacetylase; chromosome CDS1248052 852 + 0.261737
FN0595 Acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferaseRecName: Full=Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Short=UDP-N-acetylglucosamine acyltransferase; EC=2.3.1.129; chromosome CDS1249368 774 + 0.306202
FN0597 Lipid-A-disaccharide synthaseSubName: Full=Lipid-A-disaccharide synthase; EC=2.4.1.182; chromosome CDS1250954 1071 + 0.245565
FN0610 unknownSubName: Full=Uncharacterized protein; chromosome CDS1264955 3468 + 0.273356
FN0619 Small-conductance mechanosensitive channelSubName: Full=Small-conductance mechanosensitive channel; chromosome CDS1278900 846 - 0.262411
FN0627 Glucosamine--fructose-6-phosphate aminotransferase (isomerizing)SubName: Full=Glucosamine--fructose-6-phosphate aminotransferase (Isomerizing); EC=2.6.1.16; chromosome CDS1286245 1011 - 0.277943
FN0628 Glucosamine--fructose-6-phosphate aminotransferase (isomerizing)SubName: Full=Glucosamine--fructose-6-phosphate aminotransferase (Isomerizing); EC=2.6.1.16; chromosome CDS1287289 1059 - 0.21152
FN0764 Transporter, LysE familySubName: Full=Transporter, LysE family; chromosome CDS1420467 453 + 0.231788
FN0766 Large-conductance mechanosensitive channelRecName: Full=Large-conductance mechanosensitive channel; chromosome CDS1422050 429 + 0.293706
FN0777 GTP-binding protein lepARecName: Full=Elongation factor 4; Short=EF-4; EC=3.6.5.n1; AltName: Full=Ribosomal back-translocase LepA; chromosome CDS1433108 1815 - 0.302479
FN0807 3-deoxy-manno-octulosonate cytidylyltransferaseRecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase; EC=2.7.7.38; AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid synthase; Short=CKS; Short=CMP-KDO synthase; chromosome CDS1467247 738 - 0.252033
FN0825 Hypothetical cytosolic proteinSubName: Full=Hypothetical cytosolic protein; chromosome CDS1485264 1233 + 0.224655
FN0826 periplasmic component of efflux systemSubName: Full=Periplasmic component of efflux system; chromosome CDS1486635 1017 + 0.265487
FN0838 unknownSubName: Full=Uncharacterized protein; chromosome CDS1500887 402 + 0.241294
FN0930 Glycerol-3-phosphate cytidylyltransferaseSubName: Full=Glycerol-3-phosphate cytidylyltransferase; EC=2.7.7.39; chromosome CDS1583572 483 - 0.285714
FN0937 Gamma-polyglutamic acid synthetaseSubName: Full=Gamma-polyglutamic acid synthetase; EC=6.3.2.-; chromosome CDS1589187 1149 - 0.24282
FN0992 ADP-heptose:LPS heptosyltransferase IISubName: Full=ADP-heptose:LPS heptosyltransferase II; chromosome CDS1646738 1077 + 0.258124
FN1016 Lipid A biosynthesis lauroyl acyltransferaseSubName: Full=Lipid A biosynthesis lauroyl acyltransferase; EC=2.3.1.-; chromosome CDS1670729 681 + 0.271659
FN1130 Tetraacyldisaccharide 4'-kinaseRecName: Full=Tetraacyldisaccharide 4-kinase; EC=2.7.1.130; AltName: Full=Lipid A 4-kinase; chromosome CDS1777980 978 + 0.282209
FN1144 Hypothetical Exported ProteinSubName: Full=Hypothetical Exported Protein; chromosome CDS1793493 750 - 0.264
FN1155 Cell division protein ftsISubName: Full=Cell division protein ftsI; chromosome CDS1809582 2136 + 0.273408
FN1161 Glutamate racemaseRecName: Full=Glutamate racemase; EC=5.1.1.3; chromosome CDS1819319 795 + 0.27044
FN1205 ProteaseSubName: Full=Protease; EC=3.4.21.-; chromosome CDS1863969 1284 - 0.298287
FN1211 Cell division protein ftsISubName: Full=Cell division protein ftsI; chromosome CDS1870873 1974 - 0.296353
FN1224 2-dehydro-3-deoxyphosphooctonate aldolaseRecName: Full=2-dehydro-3-deoxyphosphooctonate aldolase; EC=2.5.1.55; AltName: Full=3-deoxy-D-manno-octulosonic acid 8-phosphate synthase; AltName: Full=KDO-8-phosphate synthase; Short=KDO 8-P synthase; Short=KDOPS; AltName: Full=Phospho-2-dehydro-3-deoxyoctonate aldolase; chromosome CDS1882630 861 - 0.299652
FN1225 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--meso- lanthionine ligaseRecName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; EC=6.3.2.13; AltName: Full=Meso-A2pm-adding enzyme; AltName: Full=Meso-diaminopimelate-adding enzyme; AltName: Full=UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; AltName: Full=UDP-MurNAc-tripeptide synthetase; AltName: Full=UDP-N-acetylmuramyl-tripeptide synthetase; chromosome CDS1883456 1458 - 0.266804
FN1237 Choline kinaseSubName: Full=Choline kinase; EC=2.7.1.32; EC=2.7.7.15; chromosome CDS1893543 1605 - 0.226168
FN1238 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1895284 1098 - 0.230419
FN1241 polysaccharide biosynthesis proteinSubName: Full=Polysaccharide biosynthesis protein; chromosome CDS1897871 732 - 0.237705
FN1243 Glycosyl transferaseSubName: Full=Glycosyl transferase; EC=2.4.1.-; chromosome CDS1899714 861 - 0.242741
FN1245 Glycosyl transferaseSubName: Full=Glycosyl transferase; EC=2.4.1.-; chromosome CDS1901331 1146 - 0.21466
FN1246 Lipooligosaccharide cholinephosphotransferaseSubName: Full=Lipooligosaccharide cholinephosphotransferase; EC=2.7.8.-; chromosome CDS1902497 786 - 0.229008
FN1247 LOS biosynthesis enzyme LBGBSubName: Full=LOS biosynthesis enzyme LBGB; chromosome CDS1903295 1140 - 0.223684
FN1262 Integral membrane proteinSubName: Full=Integral membrane protein; chromosome CDS1918183 1560 + 0.239744
FN1265 Outer membrane proteinSubName: Full=Outer membrane protein; chromosome CDS1921471 609 + 0.366174
FN1266 UTP--glucose-1-phosphate uridylyltransferaseSubName: Full=UTP--glucose-1-phosphate uridylyltransferase; EC=2.7.7.9; chromosome CDS1922248 906 - 0.284768
FN1273 Outer membrane protein tolCSubName: Full=Outer membrane protein tolC; chromosome CDS1929465 1242 + 0.2657
FN1274 Acriflavin resistance protein ESubName: Full=Acriflavin resistance protein E; chromosome CDS1930753 1113 + 0.283019
FN1299 dTDP-glucose 4,6-dehydrataseSubName: Full=dTDP-glucose 4,6-dehydratase; EC=4.2.1.46; chromosome CDS1955785 930 - 0.222581
FN1310 TonB proteinSubName: Full=TonB protein; chromosome CDS1965238 729 - 0.322359
FN1322 Membrane metalloproteaseRecName: Full=Putative zinc metalloprotease FN1322; EC=3.4.24.-; chromosome CDS1977545 1020 - 0.277451
FN1334 N-acetylmuramoyl-L-alanine amidaseSubName: Full=N-acetylmuramoyl-L-alanine amidase; EC=3.5.1.28; chromosome CDS1987693 1017 - 0.289086
FN1453 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2134163 576 - 0.234375
FN1454 D-alanine--D-alanine ligaseRecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; chromosome CDS2134886 864 - 0.299769
FN1455 UDP-N-acetylenolpyruvoylglucosamine reductaseRecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; EC=1.3.1.98; AltName: Full=UDP-N-acetylmuramate dehydrogenase; chromosome CDS2135764 846 - 0.260047
FN1456 UDP-N-acetylmuramate--alanine ligaseRecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; chromosome CDS2136606 1407 - 0.290689
FN1457 UDP-N-acetylglucosamine-N-acetylmuramyl- Pentapeptide pyrophosphoryl-undecaprenol N-acetylglucosamine transferaseRecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; chromosome CDS2137993 1074 - 0.288641
FN1458 UDP-N-acetylmuramoylalanine--D-glutamateligaseRecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; chromosome CDS2139067 1365 - 0.249084
FN1459 Phospho-N-acetylmuramoyl-pentapeptide-transferaseRecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; chromosome CDS2140365 1086 - 0.29558
FN1461 Histidinol-phosphataseRecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; chromosome CDS2141693 1842 - 0.261672
FN1475 N-acetylneuraminate lyaseRecName: Full=N-acetylneuraminate lyase; EC=4.1.3.3; AltName: Full=N-acetylneuraminate pyruvate-lyase; AltName: Full=N-acetylneuraminic acid aldolase; AltName: Full=Sialate lyase; AltName: Full=Sialic acid aldolase; AltName: Full=Sialic acid lyase; chromosome CDS2157925 873 + 0.269187
FN1494 Rod shape-determining protein mreCSubName: Full=Rod shape-determining protein mreC; chromosome CDS2174153 324 - 0.311728
FN1496 Rod shape-determining protein mreCSubName: Full=Rod shape-determining protein mreC; chromosome CDS77 633 - 0.274882
FN1520 UDP-N-acetylglucosamine1-carboxyvinyltransferaseRecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase; Short=EPT; chromosome CDS24892 1272 - 0.320755
FN1531 murein hydrolase export regulatorSubName: Full=Murein hydrolase export regulator; chromosome CDS44326 735 - 0.296599
FN1586 O-succinylbenzoate-CoA synthaseSubName: Full=O-succinylbenzoate-CoA synthase; chromosome CDS97505 1128 - 0.315603
FN1606 3-deoxy-D-manno-octulosonic-acid transferaseRecName: Full=Bifunctional glycosyltransferase/methyltransferase; Includes: RecName: Full=KdtA protein homolog; EC=2.-.-.-; Includes: RecName: Full=tRNA (guanine-N(7)-)-methyltransferase; EC=2.1.1.33; AltName: Full=tRNA (guanine(46)-N(7))-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase; chromosome CDS115376 1923 - 0.24285
FN1667 dTDP-glucose 4,6-dehydrataseSubName: Full=dTDP-glucose 4,6-dehydratase; EC=4.2.1.46; chromosome CDS163363 1200 - 0.2725
FN1668 Cholinephosphate cytidylyltransferaseSubName: Full=Cholinephosphate cytidylyltransferase; EC=2.7.7.15; chromosome CDS164781 873 - 0.22795
FN1670 Choline kinaseSubName: Full=Choline kinase; EC=2.7.1.32; EC=2.7.7.15; chromosome CDS166560 1797 - 0.232053
FN1672 Membrane-bound O-acyltransferaseSubName: Full=Membrane-bound O-acyltransferase; chromosome CDS169923 1461 - 0.22245
FN1684 N-acetylneuraminate synthaseSubName: Full=N-acetylneuraminate synthase; EC=2.5.1.56; chromosome CDS179173 1056 - 0.283144
FN1685 dTDP-4-dehydrorhamnose reductaseSubName: Full=dTDP-4-dehydrorhamnose reductase; EC=1.1.1.133; chromosome CDS180225 879 - 0.219568
FN1686 Spore coat polysaccharide biosynthesis protein spsFSubName: Full=Spore coat polysaccharide biosynthesis protein spsF; chromosome CDS181117 780 - 0.241026
FN1689 UDP-N-acetylglucosamine 4,6-dehydrataseSubName: Full=UDP-N-acetylglucosamine 4,6-dehydratase; EC=1.1.1.-; EC=4.2.1.-; chromosome CDS184678 1011 - 0.281899
FN1692 Glycosyl transferaseSubName: Full=Glycosyl transferase; EC=2.4.1.-; chromosome CDS187873 807 - 0.242875
FN1693 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS188676 582 - 0.219931
FN1694 UDP-N-acetyl-D-quinovosamine 4-epimeraseSubName: Full=UDP-N-acetyl-D-quinovosamine 4-epimerase; EC=5.1.3.-; chromosome CDS189387 873 - 0.249714
FN1695 Probable quinovosaminephosphotransferaeSubName: Full=Probable quinovosaminephosphotransferae; EC=2.7.-.-; chromosome CDS190259 693 - 0.255411
FN1696 UDP-N-acetylglucosamine 4,6-dehydrataseSubName: Full=UDP-N-acetylglucosamine 4,6-dehydratase; EC=1.1.1.-; EC=4.2.1.-; chromosome CDS190966 1824 - 0.248355
FN1698 dTDP-4-dehydrorhamnose reductaseSubName: Full=dTDP-4-dehydrorhamnose reductase; EC=1.1.1.133; chromosome CDS193787 897 - 0.286511
FN1699 dTDP-4-dehydrorhamnose 3,5-epimeraseSubName: Full=dTDP-4-dehydrorhamnose 3,5-epimerase; EC=5.1.3.13; chromosome CDS194693 249 - 0.192771
FN1703 ADP-L-glycero-D-manno-heptose-6-epimeraseRecName: Full=ADP-L-glycero-D-manno-heptose-6-epimerase; EC=5.1.3.20; AltName: Full=ADP-L-glycero-beta-D-manno-heptose-6-epimerase; Short=ADP-glyceromanno-heptose 6-epimerase; Short=ADP-hep 6-epimerase; Short=AGME; chromosome CDS198084 999 - 0.283283
FN1704 Serine proteaseSubName: Full=Serine protease; EC=3.4.21.-; chromosome CDS199275 2283 + 0.26544
FN1711 MethyltransferaseRecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; chromosome CDS206465 945 + 0.29418
FN1722 Glucose inhibited division protein BRecName: Full=Ribosomal RNA small subunit methyltransferase G; EC=2.1.1.-; AltName: Full=16S rRNA 7-methylguanosine methyltransferase; Short=16S rRNA m7G methyltransferase; chromosome CDS220134 699 - 0.246066
FN1785 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS266302 474 - 0.221519
FN1786 ADP-heptose synthaseSubName: Full=ADP-heptose synthase; EC=2.7.-.-; chromosome CDS266910 972 + 0.288066
FN1832 TonB proteinSubName: Full=TonB protein; chromosome CDS321530 705 - 0.316312
FN1847 DTDP-4-dehydrorhamnose 3,5-epimeraseSubName: Full=DTDP-4-dehydrorhamnose 3,5-epimerase; EC=1.1.1.133; EC=5.1.3.13; chromosome CDS336282 987 + 0.27153
FN1870 unknownSubName: Full=Uncharacterized protein; chromosome CDS361544 729 - 0.196159
FN1909 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferaseRecName: Full=UDP-3-O-acylglucosamine N-acyltransferase; EC=2.3.1.-; chromosome CDS401802 999 - 0.295295
FN1910 periplasmic proteinSubName: Full=Periplasmic protein; chromosome CDS402825 474 - 0.28692
FN1911 Outer membrane proteinSubName: Full=Outer membrane protein; chromosome CDS403339 2037 - 0.309769
FN1991 Glucosamine-1-phosphate acetyltransferaseRecName: Full=Bifunctional protein GlmU; Includes: RecName: Full=UDP-N-acetylglucosamine pyrophosphorylase; EC=2.7.7.23; AltName: Full=N-acetylglucosamine-1-phosphate uridyltransferase; Includes: RecName: Full=Glucosamine-1-phosphate N-acetyltransferase; EC=2.3.1.157; chromosome CDS494763 1341 + 0.291573
FN2009 Glycine betaine transport system permease proteinSubName: Full=Glycine betaine transport system permease protein; chromosome CDS508409 1542 - 0.270428
FN2012 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS513216 774 - 0.267442
FN2048 Outer membrane proteinSubName: Full=Outer membrane protein; chromosome CDS558891 456 - 0.278509
FN2059 Outer membrane proteinSubName: Full=Outer membrane protein; chromosome CDS572967 456 - 0.278509
FN2109 UDP-glucose 4-epimeraseSubName: Full=UDP-glucose 4-epimerase; EC=5.1.3.2; chromosome CDS620988 990 + 0.324242