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2024-04-28 18:13:30

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Xanthomonas axonopodis pv. citri str. 306, 306

Number of genes found: 253

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Xanthomonas axonopodis pv. citri str. 306, 306
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
XAC0038 conserved hypothetical proteinchromosome CDS47588 870 - 0.643678
XAC0045 hypothetical proteinchromosome CDS55159 1269 - 0.668243
XAC0047 galactosyltransferasechromosome CDS57197 1080 - 0.667593
XAC0105 conserved hypothetical proteinchromosome CDS120169 657 - 0.689498
XAC0149 hypothetical proteinchromosome CDS180838 1185 + 0.496203
XAC0339 oxidoreductasechromosome CDS405999 879 - 0.688282
XAC0420 conserved hypothetical proteinchromosome CDS491230 2493 + 0.638989
XAC0432 conserved hypothetical proteinchromosome CDS514037 681 + 0.676946
XAC0463 conserved hypothetical proteinchromosome CDS552780 903 + 0.69103
XAC0498 conserved hypothetical proteinchromosome CDS585864 450 + 0.684444
XAC0553 conserved hypothetical proteinchromosome CDS655182 948 - 0.733122
XAC0589 conserved hypothetical proteinchromosome CDS690624 621 - 0.634461
XAC0623 conserved hypothetical proteinchromosome CDS737991 801 - 0.656679
XAC0626 outer membrane lipoproteinchromosome CDS740423 624 - 0.63141
XAC0731 conserved hypothetical proteinchromosome CDS871505 1101 + 0.659401
XAC0787 peptidasechromosome CDS933018 942 + 0.654989
XAC0810 conserved hypothetical proteinchromosome CDS964986 156 + 0.666667
XAC0868 hypothetical proteinchromosome CDS1030414 810 - 0.488889
XAC0933 truncated xylanasechromosome CDS1097141 576 + 0.644097
XAC0934 truncated xylanasechromosome CDS1097734 330 + 0.660606
XAC1001 membrane proteinchromosome CDS1154603 1128 + 0.652482
XAC1008 conserved hypothetical proteinchromosome CDS1162994 429 - 0.631702
XAC1024 non-hemolytic phospholipase Cchromosome CDS1182593 2082 + 0.662344
XAC1117 conserved hypothetical proteinchromosome CDS1267874 1878 + 0.671991
XAC1118 conserved hypothetical proteinchromosome CDS1269678 1065 + 0.648826
XAC1220 conserved hypothetical proteinchromosome CDS1399109 1734 - 0.67474
XAC1233 conserved hypothetical proteinchromosome CDS1411049 627 - 0.671451
XAC1304 hypothetical proteinchromosome CDS1495675 2685 + 0.607076
XAC1344 conserved hypothetical proteinchromosome CDS1550909 555 - 0.663063
XAC1356 conserved hypothetical proteinchromosome CDS1563603 567 - 0.608466
XAC1372 conserved hypothetical proteinchromosome CDS1580576 1071 - 0.654528
XAC1399 sensor proteinchromosome CDS1611681 702 + 0.652422
XAC1414 conserved hypothetical proteinchromosome CDS1628973 1347 - 0.657758
XAC1463 phospholipasechromosome CDS1690479 1218 - 0.628079
XAC1479 OmpA family proteinchromosome CDS1707803 726 + 0.657025
XAC1526 outer membrane component of multidrug efflux pumpchromosome CDS1761852 1404 - 0.670228
XAC1527 RND efflux membrane fusion proteinchromosome CDS1763252 1065 - 0.696714
XAC1651 TonB-like proteinchromosome CDS1903275 597 - 0.686767
XAC1652 conserved hypothetical proteinchromosome CDS1904098 672 - 0.720238
XAC1691 aminotransferasechromosome CDS1947373 1113 + 0.631626
XAC1693 glycosyl transferasechromosome CDS1949732 951 + 0.634069
XAC1699 glycosyltransferasechromosome CDS1956170 1131 + 0.665783
XAC1700 hexosyltransferasechromosome CDS1957120 1299 + 0.666667
XAC1868 hypothetical proteinchromosome CDS2169619 1053 + 0.575499
XAC1928 hypothetical proteinchromosome CDS2252665 834 + 0.682254
XAC2115 conserved hypothetical proteinchromosome CDS2472927 417 - 0.695444
XAC2256 conserved hypothetical proteinchromosome CDS2639080 612 + 0.73366
XAC2293 epimerasechromosome CDS2683045 1908 - 0.635744
XAC2361 peptidasechromosome CDS2755651 843 + 0.663108
XAC2568 conserved hypothetical proteinchromosome CDS3027628 1155 - 0.657143
XAC2609 carboxypeptidasechromosome CDS3074406 1296 - 0.571759
XAC2753 lipoproteinchromosome CDS3226187 654 + 0.668196
XAC2755 conserved hypothetical proteinchromosome CDS3226950 750 + 0.669333
XAC2774 TonB-like proteinchromosome CDS3253301 675 + 0.65037
XAC2786 conserved hypothetical proteinchromosome CDS3266478 2202 + 0.639419
XAC2801 conserved hypothetical proteinchromosome CDS3284277 906 - 0.662252
XAC2928 peptidasechromosome CDS3435092 618 + 0.676375
XAC2955 nucleotidyl transferasechromosome CDS3460286 711 + 0.637131
XAC3041 conserved hypothetical proteinchromosome CDS3558203 852 + 0.694836
XAC3044 conserved hypothetical proteinchromosome CDS3561584 1947 + 0.646122
XAC3174 conserved hypothetical proteinchromosome CDS3733592 579 - 0.507772
XAC3245 RhsD proteinchromosome CDS3823370 4533 + 0.616148
XAC3279 hypothetical proteinchromosome CDS3859838 1596 - 0.529449
XAC3323 acidic amino acid rich proteinchromosome CDS3908989 4005 + 0.64794
XAC3327 RND efflux membrane fusion proteinchromosome CDS3918510 1071 - 0.660131
XAC3368 conserved hypothetical proteinchromosome CDS3967496 720 + 0.648611
XAC3466 membrane proteinchromosome CDS4091820 1332 - 0.68994
XAC3467 glycosyltransferasechromosome CDS4093132 1113 - 0.712489
XAC3524 conserved hypothetical proteinchromosome CDS4167419 1323 - 0.60771
XAC3593 NAD dependent epimerase/dehydratase/dehydrogenasechromosome CDS4261220 945 + 0.621164
XAC3634 conserved hypothetical proteinchromosome CDS4310326 921 + 0.625407
XAC3703 conserved hypothetical proteinchromosome CDS4378401 558 + 0.641577
XAC3711 conserved hypothetical proteinchromosome CDS4387173 705 + 0.662411
XAC3740 UDP-glucose 4-epimerasechromosome CDS4414820 1170 + 0.652991
XAC3741 conserved hypothetical proteinchromosome CDS4416027 1185 + 0.647257
XAC3784 hypothetical proteinchromosome CDS4453839 462 - 0.5671
XAC3795 conserved hypothetical proteinchromosome CDS4464083 1059 - 0.670444
XAC3796 lipopolysaccharide core biosynthesis glycosyl transferasechromosome CDS4465142 825 + 0.661818
XAC3797 conserved hypothetical proteinchromosome CDS4466160 1278 - 0.656494
XAC3798 conserved hypothetical proteinchromosome CDS4467603 1722 - 0.671893
XAC3859 D-alanyl-D-alanine dipeptidasechromosome CDS4541941 633 - 0.666667
XAC3861 conserved hypothetical proteinchromosome CDS4544006 1365 + 0.649084
XAC3898 conserved hypothetical proteinchromosome CDS4583700 1419 + 0.64623
XAC4039 conserved hypothetical proteinchromosome CDS4731017 993 + 0.719033
XAC4052 TonB-like proteinchromosome CDS4747404 1011 + 0.703264
XAC4088 dolichyl-phosphate mannose synthase related proteinchromosome CDS4792345 822 + 0.664234
XAC4188 RTS beta proteinchromosome CDS4925905 1248 + 0.669872
XAC4204 conserved hypothetical proteinchromosome CDS4950735 1782 - 0.643098
XAC4296 transglycolasechromosome CDS5077186 2487 - 0.706474
acrA multidrug resistance proteinchromosome CDS2918018 1308 + 0.704893
acrE acriflavin resistance proteinchromosome CDS4686981 1128 + 0.669326
alr alanine racemasechromosome CDS4364048 1101 - 0.692098
amiC N-acetylmuramoyl-L-alanine amidasechromosome CDS2802985 1728 - 0.677662
amiC N-acetylmuramoyl-L-alanine amidasechromosome CDS2049724 1155 + 0.662338
bcsA celullose synthasechromosome CDS4160172 2190 - 0.647489
betT high-affinity choline transportchromosome CDS858843 1980 - 0.632828
blc outer membrane lipoproteinchromosome CDS5029387 546 + 0.626374
blc outer membrane lipoprotein Blcchromosome CDS4652191 558 + 0.625448
blc outer membrane lipoprotein Blcchromosome CDS3019294 537 + 0.681564
bplD lipopolysaccharide biosynthesis proteinchromosome CDS53953 1119 + 0.658624
cdh NAD(P)H steroid dehydrogenasechromosome CDS3028773 960 - 0.648958
cdh NAD(P)H steroid dehydrogenasechromosome CDS286912 1011 + 0.654797
cfaA cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS1582985 1353 - 0.654841
ctp carboxyl-terminal proteasechromosome CDS24251 1527 - 0.685003
czcB cation efflux system proteinchromosome CDS4893083 1272 - 0.677673
czcB cation efflux system proteinchromosome CDS2502758 1251 + 0.67546
czcB cation efflux system proteinchromosome CDS2406716 1116 + 0.664875
czcC cation efflux system proteinchromosome CDS4894548 1272 - 0.716195
dacC penicillin-binding protein 6chromosome CDS788090 1206 + 0.650083
dapA dihydrodipicolinate synthetasechromosome CDS3004721 909 - 0.663366
dapA dihydroxydipicolinate synthasechromosome CDS2017561 909 + 0.70187
ddlA D-alanine-D-alanine ligasechromosome CDS288478 228 - 0.622807
ddlB D-alanine-D-alanine ligase Bchromosome CDS926577 957 + 0.667712
dgkA diacylglycerol kinasechromosome CDS998754 369 + 0.655827
dgoA 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolasechromosome CDS2021322 1149 - 0.644038
dniR membrane-bound lytic murein transglycosylase D precursorchromosome CDS3190523 1413 - 0.65959
dniR murein hydrolase Dchromosome CDS1241249 1179 - 0.668363
dpm1 dolichol-phosphate mannosyltransferasechromosome CDS4594482 807 + 0.651797
flgJ flagellar proteinchromosome CDS2310423 1077 - 0.677809
ftsI penicillin-binding protein 3chromosome CDS916562 1869 + 0.668807
ftsQ cell division proteinchromosome CDS927640 837 + 0.65233
galU UTP-glucose-1-phosphate uridylyltransferasechromosome CDS2682152 894 - 0.618568
gidB glucose inhibited division protein Bchromosome CDS4898671 783 - 0.703704
glmS glucosamine-fructose-6-phosphateaminotransferasechromosome CDS848221 999 + 0.675676
glmS glucosamine-fructose-6-phosphateaminotransferasechromosome CDS4313701 1830 - 0.650273
glmU UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS4323867 1374 - 0.65575
gtrB glycosyl transferase related proteinchromosome CDS2481258 714 + 0.648459
gtrB glycosyl transferasechromosome CDS1196731 1137 - 0.657872
gtrB glucosyl transferasechromosome CDS3563931 1023 - 0.629521
gumB GumB proteinchromosome CDS3046740 642 - 0.609034
gumC GumC proteinchromosome CDS3045319 1353 - 0.597931
gumD GumD proteinchromosome CDS3043621 1455 - 0.611684
gumH GumH proteinchromosome CDS3038837 1143 - 0.621172
gumI GumI proteinchromosome CDS3037791 1050 - 0.648571
gumM GumM proteinchromosome CDS3033392 792 - 0.651515
hlyD hemolysin secretion protein Dchromosome CDS2583716 1476 - 0.704607
hmsR HmsR proteinchromosome CDS2083978 1254 - 0.64673
hpa2 Hpa2 proteinchromosome CDS487918 417 + 0.589928
hrpM periplasmic glucan biosynthesis proteinchromosome CDS732370 1899 + 0.682464
htrB lipid A biosynthesis lauroyl acyltransferasechromosome CDS4090809 921 + 0.65798
htrB lipid A biosynthesis lauroyl acyltransferasechromosome CDS4458699 915 + 0.707104
kdsA 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS1979466 831 + 0.618532
kdsB 3-deoxy-manno-octulosonate cytidylyltransferasechromosome CDS2438154 780 + 0.664103
kdtA 3-deoxy-D-manno-octulosonic acid transferasechromosome CDS4089200 1317 - 0.664389
lepA GTP binding proteinchromosome CDS1527435 1806 + 0.632337
lgt prolipoprotein diacylglyceryl transferasechromosome CDS1001632 891 + 0.632997
lgtB glycosyltransferasechromosome CDS265555 810 + 0.630864
lolA outer-membrane lipoproteins carrier protein precursorchromosome CDS2346431 630 + 0.642857
lolB outer membrane lipoprotein precursorchromosome CDS1110291 654 + 0.7263
lolC lipoprotein releasing system transmembrane proteinchromosome CDS2427951 1242 + 0.619968
lpxA UDP-N-acetylglucosamine acyltransferasechromosome CDS1623841 792 - 0.651515
lpxB lipid A disaccharide synthasechromosome CDS1622525 1287 - 0.67366
lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylasechromosome CDS931453 933 + 0.622722
lpxD UDP-3-O-(R-3-hydroxymyristoyl)-glucosamineN-acyl transferasechromosome CDS1625113 1014 - 0.661736
lpxK lipid A 4'-kinasechromosome CDS2436824 1038 + 0.682081
lspA lipoprotein signal peptidasechromosome CDS1433838 519 + 0.645472
lytB penicillin tolerance proteinchromosome CDS1434423 951 + 0.663512
mdoB phosphoglycerol transferase Ichromosome CDS493819 2085 - 0.644125
mexA multidrug resistance proteinchromosome CDS3336022 1215 - 0.688889
mexC RND efflux membrane fusion proteinchromosome CDS3283148 1107 - 0.700994
mexE component of multidrug efflux systemchromosome CDS520919 1098 + 0.716758
mexE RND multidrug efflux membrane fusion proteinchromosome CDS1711521 1191 + 0.675903
mlt XACb0007 lytic murein transglycosylasepXAC64 CDS3862 1278 - 0.623631
mltB transglycosylasechromosome CDS3798986 1278 - 0.625196
mltB membrane-bound lytic transglycosylasechromosome CDS785110 1140 + 0.664912
mopB outer membrane proteinchromosome CDS1168494 1098 + 0.624772
mpl UDP-N-acetylmuramate-L-alanine ligasechromosome CDS4045771 1359 - 0.668138
mraW cell division proteinchromosome CDS915221 1029 + 0.684159
mraY phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS921412 1086 + 0.621547
mrcA penicillin-binding protein 1Achromosome CDS3990480 2523 + 0.655569
mrdA penicillin-binding protein 2chromosome CDS779917 2061 + 0.682678
mreC rod shape-determining proteinchromosome CDS778079 1353 + 0.691796
mreD rod shape-determining proteinchromosome CDS779428 486 + 0.676955
mscL large-conductance mechanosensitive channelchromosome CDS3886063 432 + 0.599537
mtgA monofunctional biosynthetic peptidoglycan transglycosylasechromosome CDS3564980 741 - 0.665317
mtrC membrane fusion protein precursorchromosome CDS4527423 1245 + 0.662651
murA UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS3468970 1275 - 0.663529
murB UDP-N-acetylpyruvoylglucosamine reductasechromosome CDS2077734 1053 - 0.65622
murC UDP-N-acetylmuramate-alanine ligasechromosome CDS925147 1434 + 0.672245
murD UDP-N-acetylmuramoylalanine-D-glutamate ligasechromosome CDS3414570 1407 - 0.675195
murE UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligasechromosome CDS918427 1488 + 0.680108
murF UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligasechromosome CDS919911 1512 + 0.685847
murG UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenolchromosome CDS923870 1281 + 0.678376
nlpD lipoproteinchromosome CDS1987937 780 + 0.660256
nodT outer membrane efflux proteinchromosome CDS5090617 1461 + 0.699521
oma outer membrane antigenchromosome CDS1626523 2367 - 0.626109
omp21 outer membrane proteinchromosome CDS3952886 615 + 0.629268
ompP6 outer membrane protein P6 precursorchromosome CDS3691750 546 - 0.6337
ompW outer membrane protein Wchromosome CDS3952128 642 + 0.632399
ompW outer membrane proteinchromosome CDS4342359 687 + 0.640466
oprM outer membrane proteinchromosome CDS3331350 1512 - 0.656085
oprN outer membrane protein OprN precursorchromosome CDS2877981 1509 - 0.689198
oprN outer membrane proteinchromosome CDS518627 1512 - 0.699074
oprN outer membrane proteinchromosome CDS1716831 1425 + 0.675789
opsX saccharide biosynthesis regulatory proteinchromosome CDS1247218 1050 - 0.667619
ostA organic solvent tolerance precursorchromosome CDS1027583 2454 - 0.627547
pat phosphinothricin N-acetyltransferasechromosome CDS2693612 540 + 0.638889
pbpC bifunctional penicillin-binding protein 1Cchromosome CDS1307645 2391 + 0.670431
peh-1 endopolygalacturonasechromosome CDS783450 1392 + 0.643678
pglA polygalacturonasechromosome CDS2767248 1671 + 0.644524
plcN phospholipase Cchromosome CDS3711800 606 + 0.694719
plcN phospholipase Cchromosome CDS3712171 1779 + 0.681844
ponB penicillin-binding protein 1Bchromosome CDS3652456 2445 - 0.680164
prc tail-specific proteasechromosome CDS793114 2184 + 0.641026
rfb303 lipopolysaccharide core biosynthesis proteinchromosome CDS2684966 969 - 0.644995
rfbC truncated O-antigen biosynthesis proteinchromosome CDS4268086 1845 - 0.601626
rfbD UDP-galactopyranose mutasechromosome CDS4417199 1194 + 0.631491
rffM UDP-N-acetyl-D-mannosamine transferasechromosome CDS56424 777 - 0.687259
rhsD RhsD proteinchromosome CDS2962809 4779 + 0.568947
rlpA rare lipoprotein Achromosome CDS786246 1428 + 0.684874
rlpB lipoproteinchromosome CDS3258726 645 - 0.674419
rmd degenerated UDP-glucose epimerasechromosome CDS66191 957 - 0.689655
rmlA glucose-1-phosphate thymidylyltransferasechromosome CDS4250222 921 - 0.595005
rmlB dTDP-glucose 4,6-dehydratasechromosome CDS4251173 1056 - 0.624053
rmlC dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS4249668 558 - 0.59319
rmlD dTDP-4-keto-L-rhamnose reductasechromosome CDS4248772 900 - 0.684444
rpfN regulator of pathogenicity factorschromosome CDS2930053 1137 + 0.64292
rspA starvation sensing proteinchromosome CDS4991459 1260 + 0.651587
sapC SapC proteinchromosome CDS4744032 690 + 0.631884
slp outer membrane protein Slpchromosome CDS1263470 501 - 0.682635
slt soluble lytic murein transglycosylasechromosome CDS4223637 2106 + 0.663343
smeA acriflavin resistance proteinchromosome CDS388561 1227 + 0.693562
smeC outer membrane proteinchromosome CDS392943 1467 + 0.650307
tcbD chloromuconate cycloisomerasechromosome CDS4545367 1098 + 0.653916
tolC TolC proteinchromosome CDS4087550 1383 + 0.65799
tonB TonB proteinchromosome CDS3647025 876 + 0.696347
tonB TonB proteinchromosome CDS10983 672 + 0.644345
ttgC outer membrane efflux proteinchromosome CDS2507090 1485 + 0.695623
ttgF outer membrane channel proteinchromosome CDS3285133 1470 - 0.667347
ugd UDP-glucose dehydrogenasechromosome CDS1791818 1350 + 0.62963
ugd UDP-glucose dehydrogenasechromosome CDS4247266 1167 - 0.61611
uptE outer membrane proteinchromosome CDS4277145 891 - 0.695847
vacJ lipoproteinchromosome CDS5137518 1056 + 0.693182
vioA nucleotide sugar transaminasechromosome CDS2297368 1110 - 0.620721
vipA polysaccharide biosynthetic proteinchromosome CDS2459067 1293 + 0.636504
virB1 VirB1 proteinchromosome CDS3082452 843 - 0.59312
virB1 XACb0036 VirB1 proteinpXAC64 CDS33079 879 - 0.660978
wapA wall associated proteinchromosome CDS2164332 4599 + 0.683844
wapA wall-associated proteinchromosome CDS1498356 3600 + 0.586944
wbdB mannosyltransferase Bchromosome CDS50146 1143 + 0.643045
wbnF nucleotide sugar epimerasechromosome CDS4593241 966 + 0.667702
wbpZ glycosyltransferasechromosome CDS51285 1173 + 0.625746
wcaJ UDP-glucose lipid carrier transferasechromosome CDS52524 1410 + 0.665248
wzm ABC transporter permeasechromosome CDS4272888 783 - 0.553001
wzt ABC transporter ATP-binding proteinchromosome CDS4271662 1230 - 0.556098
xcsC type II secretion system protein Cchromosome CDS823831 810 + 0.683951
ybjY ABC transporter permeasechromosome CDS4315736 1272 + 0.702044
yehZ ABC transporter amino acid permeasechromosome CDS224599 1470 + 0.653061
ygeA putative resistance proteinchromosome CDS2075985 705 - 0.652482
yggB small conductance mechanosensitive ion channelchromosome CDS2384048 975 - 0.625641
yjbJ soluble lytic murein transglycosylasechromosome CDS2862053 984 - 0.667683
yjcP outer membrane efflux proteinchromosome CDS1666433 1491 + 0.691482
yncA phosphinothricin acetyltransferasechromosome CDS4459781 522 - 0.641762