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2024-05-01 07:20:48

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913

Number of genes found: 239

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Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
XCC0077 conserved hypothetical proteinchromosome CDS91998 657 - 0.700152
XCC0130 RhsD protein precursorchromosome CDS170555 1176 + 0.569728
XCC0253 conserved hypothetical proteinchromosome CDS316863 648 - 0.669753
XCC0321 oxidoreductasechromosome CDS394017 888 - 0.708333
XCC0402 conserved hypothetical proteinchromosome CDS479055 2466 + 0.646796
XCC0415 conserved hypothetical proteinchromosome CDS504546 681 + 0.687225
XCC0439 conserved hypothetical proteinchromosome CDS538879 666 + 0.714715
XCC0447 conserved hypothetical proteinchromosome CDS545752 936 + 0.702991
XCC0449 lytic enzymechromosome CDS547793 1731 - 0.607163
XCC0487 conserved hypothetical proteinchromosome CDS586546 453 + 0.684327
XCC0573 conserved hypothetical proteinchromosome CDS691390 927 - 0.597627
XCC0606 GDP-mannose 4,6 dehydratasechromosome CDS729897 945 + 0.557672
XCC0678 conserved hypothetical proteinchromosome CDS819613 1344 + 0.602679
XCC0733 peptidasechromosome CDS878541 945 + 0.669841
XCC0758 conserved hypothetical proteinchromosome CDS909715 1296 + 0.685185
XCC0857 xylanasechromosome CDS1017204 1218 + 0.633005
XCC0923 membrane proteinchromosome CDS1072572 1128 + 0.656915
XCC0930 conserved hypothetical proteinchromosome CDS1080561 513 - 0.60039
XCC0947 non-hemolytic phospholipase Cchromosome CDS1101953 2082 + 0.662824
XCC1009 conserved hypothetical proteinchromosome CDS1158644 1857 + 0.670975
XCC1010 conserved hypothetical proteinchromosome CDS1160520 501 + 0.666667
XCC1011 conserved hypothetical proteinchromosome CDS1161075 426 + 0.624413
XCC1119 conserved hypothetical proteinchromosome CDS1308730 1767 - 0.695529
XCC1132 conserved hypothetical proteinchromosome CDS1320689 627 - 0.682616
XCC1293 conserved hypothetical proteinchromosome CDS1511543 561 - 0.680927
XCC1305 conserved hypothetical proteinchromosome CDS1522670 567 - 0.624339
XCC1326 conserved hypothetical proteinchromosome CDS1544658 1071 - 0.662932
XCC1328 conserved hypothetical proteinchromosome CDS1546525 546 - 0.705128
XCC1366 conserved hypothetical proteinchromosome CDS1590478 1347 - 0.682257
XCC1420 phospholipasechromosome CDS1654427 1131 - 0.6313
XCC1436 outer membrane proteinchromosome CDS1671476 726 + 0.669421
XCC1451 conserved hypothetical proteinchromosome CDS1690607 717 + 0.531381
XCC1478 outer membrane component of multidrug efflux pumpchromosome CDS1727239 1404 - 0.66453
XCC1479 RND efflux membrane fusion proteinchromosome CDS1728639 1086 - 0.698895
XCC1592 TonB-like proteinchromosome CDS1860985 597 - 0.680067
XCC1593 conserved hypothetical proteinchromosome CDS1861662 750 - 0.705333
XCC1625 unknown acidic aa rich proteinchromosome CDS1892125 4017 + 0.636794
XCC1639 RhsD protein precursorchromosome CDS1912059 2166 + 0.60157
XCC1671 aminotransferasechromosome CDS1944224 1143 + 0.649169
XCC1673 glycosyl transferasechromosome CDS1946613 939 + 0.57934
XCC1675 conserved hypothetical proteinchromosome CDS1948676 906 + 0.678808
XCC1679 glycosyltransferasechromosome CDS1952647 1125 + 0.691556
XCC1680 hexosyltransferasechromosome CDS1953717 1164 + 0.697595
XCC1837 conserved hypothetical proteinchromosome CDS2138559 540 + 0.631481
XCC1872 conserved hypothetical proteinchromosome CDS2182011 798 - 0.642857
XCC2014 putative epimerase/dehydratasechromosome CDS2363195 1050 - 0.657143
XCC2015 glucose-1-phosphate cytidylyltransferasechromosome CDS2364249 774 - 0.635659
XCC2081 conserved hypothetical proteinchromosome CDS2451500 423 + 0.699764
XCC2124 conserved hypothetical proteinchromosome CDS2509309 1065 + 0.642254
XCC2189 epimerase/dehydratase proteinchromosome CDS2581682 1839 - 0.641109
XCC2258 peptidasechromosome CDS2656596 906 + 0.688742
XCC2583 lipoproteinchromosome CDS3067558 576 + 0.640625
XCC2584 conserved hypothetical proteinchromosome CDS3068243 744 + 0.681452
XCC2759 peptidasechromosome CDS3270496 591 + 0.680203
XCC2858 conserved hypothetical proteinchromosome CDS3379948 855 + 0.726316
XCC2861 conserved hypothetical proteinchromosome CDS3383294 1956 + 0.653885
XCC3086 conserved hypothetical proteinchromosome CDS3658410 507 - 0.688363
XCC3170 RND efflux membrane fusion proteinchromosome CDS3762558 1086 - 0.685083
XCC3210 conserved hypothetical proteinchromosome CDS3812531 975 + 0.673846
XCC3211 conserved hypothetical proteinchromosome CDS3813509 732 + 0.662568
XCC3339 membrane proteinchromosome CDS3971520 1335 - 0.700375
XCC3340 glycosyl transferasechromosome CDS3972835 1113 - 0.713387
XCC3393 conserved hypothetical proteinchromosome CDS4035961 1098 - 0.668488
XCC3409 nisin-resistance proteinchromosome CDS4061341 975 - 0.659487
XCC3508 outer membrane lipoproteinchromosome CDS4176457 624 + 0.641026
XCC3510 conserved hypothetical proteinchromosome CDS4178461 801 + 0.645443
XCC3551 hypothetical proteinchromosome CDS4238055 1080 + 0.685185
XCC3604 conserved hypothetical proteinchromosome CDS4298975 948 - 0.728903
XCC3663 conserved hypothetical proteinchromosome CDS4362720 453 + 0.646799
XCC3670 conserved hypothetical proteinchromosome CDS4371037 696 + 0.676724
XCC3696 UDP-glucose 4-epimerasechromosome CDS4399357 1152 + 0.670139
XCC3697 conserved hypothetical proteinchromosome CDS4400544 1185 + 0.658228
XCC3743 conserved hypothetical proteinchromosome CDS4449635 1059 - 0.672332
XCC3744 lipopolysaccharide core biosynthesis glycosyl transferasechromosome CDS4450694 825 + 0.664242
XCC3745 conserved hypothetical proteinchromosome CDS4451503 1290 - 0.677519
XCC3746 conserved hypothetical proteinchromosome CDS4452932 1671 - 0.676242
XCC3779 hypothetical proteinchromosome CDS4491995 924 - 0.63961
XCC3801 D-alanyl-D-alanine dipeptidasechromosome CDS4519057 705 - 0.666667
XCC3802 conserved hypothetical proteinchromosome CDS4520077 1362 - 0.562408
XCC3806 conserved hypothetical proteinchromosome CDS4524343 1347 + 0.688938
XCC3842 conserved hypothetical proteinchromosome CDS4565005 1419 + 0.659619
XCC3913 conserved hypothetical proteinchromosome CDS4642360 1161 + 0.6236
XCC3967 TonB-like proteinchromosome CDS4701927 1008 + 0.71131
XCC4000 dolichyl-phosphate mannose synthase related proteinchromosome CDS4743239 822 + 0.681265
XCC4069 RTS beta proteinchromosome CDS4828442 1326 + 0.671192
XCC4085 conserved hypothetical proteinchromosome CDS4854604 1941 - 0.646574
XCC4193 conserved hypothetical proteinchromosome CDS5003303 1350 - 0.572593
acrA multidrug resistance proteinchromosome CDS2792139 1311 + 0.701754
acrE acriflavin resistance proteinchromosome CDS4640072 1140 + 0.668421
alr alanine racemasechromosome CDS4347183 1083 - 0.685134
amiC N-acetylmuramoyl-L-alanine amidasechromosome CDS2049744 1161 + 0.66236
amiC N-acetylmuramoyl-L-alanine amidasechromosome CDS2701868 1692 - 0.682624
betT high-affinity choline transportchromosome CDS4045455 1980 + 0.637879
blc outer membrane lipoproteinchromosome CDS2888936 537 + 0.675978
blc outer membrane lipoproteinchromosome CDS4909630 549 + 0.650273
blc outer membrane lipoprotein Blcchromosome CDS4603466 558 + 0.637993
cdh NAD(P)H steroid dehydrogenasechromosome CDS277246 1014 + 0.653846
cdh NAD(P)H steroid dehydrogenasechromosome CDS2898708 960 - 0.655208
cfaA cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS1547067 1371 - 0.666667
ctp carboxyl-terminal proteasechromosome CDS24036 1581 - 0.678684
czcB cation efflux system proteinchromosome CDS2533994 1116 - 0.671147
czcB cation efflux system proteinchromosome CDS4788973 1482 - 0.68556
czcC cation efflux system proteinchromosome CDS4790451 1266 - 0.722749
dacC penicillin-binding protein 6chromosome CDS4112467 1212 - 0.651815
dapA dihydrodipicolinate synthetasechromosome CDS2869317 909 - 0.657866
dapA 5-dehydro-4-deoxyglucarate dehydratasechromosome CDS3856731 918 - 0.672113
dapA dihydroxydipicolinate synthasechromosome CDS2017371 909 + 0.70187
ddlB D-alanine-D-alanine ligase Bchromosome CDS872110 957 + 0.681296
ddlB D-alanine-D-alanine ligase Achromosome CDS279064 1122 - 0.666667
dgkA diacylglycerol kinasechromosome CDS942102 381 + 0.669291
dgoA 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolasechromosome CDS2021209 1149 - 0.641427
dniR membrane-bound lytic murein transglycosylase D precursorchromosome CDS3031284 1416 - 0.670904
dniR murein hydrolase Dchromosome CDS1139261 1167 - 0.678663
dpm1 dolichol-phosphate mannosyltransferasechromosome CDS4576177 723 + 0.679115
flgJ flagellar proteinchromosome CDS2278507 1086 - 0.677716
ftsI penicillin-binding protein 3chromosome CDS862128 1872 + 0.679487
ftsQ cell division proteinchromosome CDS873173 837 + 0.645161
gII replication initiation proteinchromosome CDS2436368 1041 + 0.581172
galU UTP-glucose-1-phosphate uridylyltransferasechromosome CDS2580789 894 - 0.627517
gidB glucose inhibited division protein Bchromosome CDS4794342 750 - 0.690667
glgC nucleotidyl transferasechromosome CDS3294577 711 + 0.658228
glmS glucosamine-fructose-6-phosphateaminotransferasechromosome CDS685495 1830 + 0.648087
glmS glucosamine-fructose-6-phosphateaminotransferasechromosome CDS4064183 999 - 0.687688
glmU UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS673327 1365 + 0.683517
gtrB glycosyl transferasechromosome CDS1115730 1137 - 0.671064
gtrB glucosyl transferasechromosome CDS3385647 1044 - 0.65613
gtrB glycosyl transferase-related proteinchromosome CDS1918110 720 - 0.693056
gumB GumB proteinchromosome CDS2916803 642 - 0.621495
gumC GumC proteinchromosome CDS2915382 1350 - 0.605926
gumD GumD proteinchromosome CDS2913685 1455 - 0.610309
gumH GumH proteinchromosome CDS2908936 1143 - 0.619423
gumI GumI proteinchromosome CDS2907890 1050 - 0.651429
gumM GumM proteinchromosome CDS2903493 792 - 0.666667
hpa2 Hpa2 proteinchromosome CDS1447013 417 + 0.57554
hrpM periplasmic glucan biosynthesis proteinchromosome CDS4183173 1938 - 0.676987
htrB lipid A biosynthesis lauroyl acyltransferasechromosome CDS3970346 921 + 0.666667
htrB lipid A biosynthesis lauroyl acyltransferasechromosome CDS4444537 915 + 0.703825
kdsA 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS1976468 831 + 0.624549
kdsB 3-deoxy-manno-octulosonate cytidylyltransferasechromosome CDS2501661 753 - 0.693227
kdtA 3-deoxy-D-manno-octulosonic acid transferasechromosome CDS3968596 1320 - 0.675
lepA GTP binding proteinchromosome CDS1487326 1806 + 0.616833
lgt prolipoprotein diacylglyceryl transferasechromosome CDS945023 891 + 0.664422
lgtB glycosyltransferasechromosome CDS257734 810 + 0.637037
lolA outer-membrane lipoproteins carrier protein precursorchromosome CDS2314615 630 + 0.634921
lolB outer membrane lipoprotein precursorchromosome CDS1030812 657 + 0.713851
lolC lipoprotein releasing system transmembrane proteinchromosome CDS2511734 1251 - 0.621902
lpxA UDP-N-acetylglucosamine acyltransferasechromosome CDS1585330 792 - 0.681818
lpxB lipid A disaccharide synthasechromosome CDS1584017 1197 - 0.678363
lpxC UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylasechromosome CDS876993 912 + 0.629386
lpxD UDP-3-O-(R-3-hydroxymyristoyl)-glucosamineN-acyl transferasechromosome CDS1586601 1014 - 0.656805
lpxK lipid A 4'-kinasechromosome CDS2502551 1056 - 0.684659
lspA lipoprotein signal peptidasechromosome CDS1346313 504 + 0.632937
lytB penicillin tolerance proteinchromosome CDS1346952 951 + 0.677182
mdoB phosphoglycerol transferase Ichromosome CDS482549 2082 - 0.648415
mexA multidrug resistance proteinchromosome CDS3180333 1200 - 0.706667
mexE RND multidrug efflux membrane fusion proteinchromosome CDS1675113 1191 + 0.668346
mexE component of multidrug efflux systemchromosome CDS511780 1116 + 0.72491
mltB membrane-bound lytic transglycosylasechromosome CDS4115150 1140 - 0.666667
mopB outer membrane proteinchromosome CDS1088357 1098 + 0.625683
mpl UDP-N-acetylmuramate-L-alanine ligasechromosome CDS3906011 1359 - 0.674761
mraW cell division proteinchromosome CDS860793 1029 + 0.680272
mraY phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS866954 1086 + 0.635359
mrcA penicillin-binding protein 1Achromosome CDS3839919 2523 + 0.656361
mrdA penicillin-binding protein 2chromosome CDS4127929 2061 - 0.689956
mreC rod shape-determining proteinchromosome CDS4130475 1350 - 0.712593
mreD rod shape-determining proteinchromosome CDS4129993 486 - 0.67284
mscL large-conductance mechanosensitive channelchromosome CDS3736901 432 + 0.599537
mtgA monofunctional biosynthetic peptidoglycan transglycosylasechromosome CDS3386702 741 - 0.678812
mtrC membrane fusion protein precursorchromosome CDS4502205 1239 + 0.686037
murA UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS3302759 1275 - 0.677647
murB UDP-N-acetylpyruvoylglucosamine reductasechromosome CDS2076404 1053 - 0.663818
murC UDP-N-acetylmuramate-alanine ligasechromosome CDS870680 1434 + 0.679916
murD UDP-N-acetylmuramoylalanine-D-glutamate ligasechromosome CDS3247599 1407 - 0.692253
murE UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligasechromosome CDS863996 1488 + 0.692876
murF UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligasechromosome CDS865480 1485 + 0.701684
murG UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenolchromosome CDS869400 1284 + 0.688474
nlpD lipoproteinchromosome CDS1984895 801 + 0.679151
nodT outer membrane efflux proteinchromosome CDS4974662 1452 + 0.721074
oma outer membrane antigenchromosome CDS1588025 2457 - 0.610094
omp21 outer membrane proteinchromosome CDS3796568 615 + 0.630894
ompP6 outer membrane protein P6 precursorchromosome CDS3562890 519 - 0.635838
ompW outer membrane proteinchromosome CDS3795825 624 + 0.653846
ompW outer membrane proteinchromosome CDS654150 678 - 0.647493
oprM outer membrane proteinchromosome CDS3175688 1494 - 0.674699
oprN outer membrane proteinchromosome CDS509525 1473 - 0.727766
oprN outer membrane proteinchromosome CDS1680414 1425 + 0.678596
oprN outer membrane protein OprN precursorchromosome CDS2750228 1512 - 0.71164
opsX saccharide biosynthesis regulatory proteinchromosome CDS1144873 1047 - 0.674308
ostA organic solvent tolerance precursorchromosome CDS952497 2430 - 0.604527
pat phosphinothricin N-acetyltransferasechromosome CDS2592115 528 + 0.659091
pbpC bifunctional penicillin-binding protein 1Cchromosome CDS1201816 2424 + 0.697195
peh-1 endopolygalacturonasechromosome CDS4116644 1401 - 0.62955
pglA polygalacturonasechromosome CDS2666405 1671 + 0.646918
plcN phospholipase Cchromosome CDS3587474 2148 + 0.700186
ponB penicillin-binding protein 1Bchromosome CDS3483794 2445 - 0.67771
prc tail-specific proteasechromosome CDS4105453 2184 - 0.644689
rbfC O-antigen biosynthesis proteinchromosome CDS2258860 3612 - 0.643411
rfb303 lipopolysaccharide core biosynthesis proteinchromosome CDS2583603 975 - 0.625641
rfbD strX proteinchromosome CDS2362617 582 - 0.649485
rfbD UDP-galactopyranose mutasechromosome CDS4401716 1197 + 0.641604
rhsD RhsD protein precursorchromosome CDS1908315 2193 + 0.565891
rhsD RhsD proteinchromosome CDS165669 4506 + 0.559476
rlpA rare lipoprotein Achromosome CDS4113807 1347 - 0.691166
rlpB lipoproteinchromosome CDS3105109 651 - 0.689708
rmd UDP-glucose 4-epimerasechromosome CDS732274 939 + 0.600639
rmlA glucose-1-phosphate thymidylyltransferasechromosome CDS744741 891 + 0.598204
rmlB dTDP-glucose 4,6-dehydratasechromosome CDS743625 1056 + 0.619318
rmlC dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS745628 558 + 0.584229
rmlD dTDP-4-dehydrorhamnose reductasechromosome CDS746182 909 + 0.643564
rpfN RpfN proteinchromosome CDS2804280 1137 + 0.652595
rspA starvation sensing proteinchromosome CDS4879694 1260 + 0.65873
slp outer membrane protein Slpchromosome CDS1154230 537 - 0.681564
slt soluble lytic murein transglycosylasechromosome CDS4054531 2034 + 0.69469
tcbD chloromuconate cycloisomerasechromosome CDS4525686 1095 + 0.6621
tcbD glucarate hydratasechromosome CDS3852297 1356 - 0.653392
tolC TolC proteinchromosome CDS3966811 1374 + 0.593886
tonB TonB proteinchromosome CDS3477548 876 + 0.699772
tonB TonB proteinchromosome CDS10559 672 + 0.636905
tonB TonB like proteinchromosome CDS3099299 681 + 0.685756
ugd UDP-glucose dehydrogenasechromosome CDS1756473 1347 + 0.633259
vacJ lipoproteinchromosome CDS5028333 1065 + 0.719249
vioA nucleotide sugar transaminasechromosome CDS2265349 1290 - 0.623256
vipA polysaccharide biosynthetic proteinchromosome CDS2462537 1293 - 0.661253
wbnF nucleotide sugar epimerasechromosome CDS4575132 966 + 0.675983
wxcA glycosyltransferasechromosome CDS720431 1386 + 0.580808
wxcC glycosyltransferasechromosome CDS726338 1080 + 0.551852
wxcD membrane protein WxcDchromosome CDS727438 1743 + 0.586919
wxcK aminotransferasechromosome CDS740147 1104 - 0.65308
wxcL glycosyltransferasechromosome CDS739191 972 - 0.609053
wzm membrane subunit of LPS efflux transporterchromosome CDS721894 792 + 0.550505
wzt ATP binding component of ABC-transporterchromosome CDS722682 1287 + 0.57265
xcsC type II secretion system protein Cchromosome CDS4078687 804 - 0.695274
ybjY ABC transporter permeasechromosome CDS684020 1272 - 0.69261
yehZ ABC transporter amino acid permeasechromosome CDS215341 1473 + 0.671419
ygeA putative resistance proteinchromosome CDS2074650 705 - 0.646809
yggB small conductance mechanosensitive ion channelchromosome CDS2555775 960 + 0.638542
yjbJ soluble lytic murein transglycosylasechromosome CDS2732483 969 - 0.678019
yjcP outer membrane efflux proteinchromosome CDS1628500 1515 + 0.711551
yncA phosphinothricin acetyltransferasechromosome CDS4445591 522 - 0.653257