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2024-05-17 08:19:58

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Rickettsia conorii str. Malish 7, Malish 7

Number of genes found: 87

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Rickettsia conorii str. Malish 7, Malish 7
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA RC1245 penicillin-binding protein 1aRecName: Full=Penicillin-binding protein 1A; Short=PBP-1a; Short=PBP1a; Includes: RecName: Full=Penicillin-insensitive transglycosylase; EC=2.4.2.-; AltName: Full=Peptidoglycan TGase; Includes: RecName: Full=Penicillin-sensitive transpeptidase; EC=3.4.-.-; AltName: Full=DD-transpeptidase; chromosome CDS1150700 2373 - 0.362832
NA RC0461 putative two-domain glycosyltransferase [EC:2.4.1.-]RecName: Full=Uncharacterized glycosyltransferase RC0461; EC=2.4.-.-; chromosome CDS456307 1815 + 0.284298
NA RC0573 unknownSubName: Full=Uncharacterized protein; chromosome CDS562286 243 - 0.378601
NA RC0572 unknownSubName: Full=Uncharacterized protein; chromosome CDS561639 378 - 0.34127
NA RC1281 unknownRecName: Full=Putative adhesin RC1281; Flags: Precursor; chromosome CDS1188765 750 - 0.322667
NA RC1220 unknownSubName: Full=Uncharacterized protein; chromosome CDS1124544 714 + 0.302521
NA RC1093 putative periplasmic proteinSubName: Full=Putative periplasmic protein; EC=2.3.1.129; chromosome CDS1018798 855 - 0.301754
NA RC1040 similarity to mannose-1-phosphate guanylyltransferaseSubName: Full=Mannose-1-phosphate guanylyltransferase-like protein; EC=2.3.1.129; chromosome CDS965351 528 + 0.314394
NA RC0331 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; chromosome CDS331586 1458 + 0.343621
NA RC0727 similarity to lysozymeSubName: Full=Lysozyme-like protein; EC=2.3.1.129; chromosome CDS700293 180 + 0.344444
NA RC0857 unknownRecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; chromosome CDS808574 924 - 0.371212
NA RC0556 similarity to glycerol-3-phosphate cytidyltransferase (tagD)SubName: Full=Glycerol-3-phosphate cytidyltransferase (TagD)-like protein; EC=2.3.1.129; chromosome CDS548101 303 - 0.283828
NA RC0105 hypothetical outer-membrane proteinRecName: Full=Putative outer membrane protein RC0105; Flags: Precursor; chromosome CDS100056 735 - 0.341497
NA RC0557 unknownSubName: Full=Uncharacterized protein; chromosome CDS548691 1431 + 0.312369
NA RC1335 unknownSubName: Full=Uncharacterized protein; chromosome CDS1238870 639 + 0.264476
NA RC0720 similarity to lipopolysaccharide 1,2-glucosyltransferase (rfaJ)SubName: Full=Lipopolysaccharide 1,2-glucosyltransferase (RfaJ)-like protein; EC=2.3.1.129; chromosome CDS691691 201 + 0.238806
NA RC0784 unknownSubName: Full=Uncharacterized protein; chromosome CDS742975 225 - 0.293333
NA RC0162 unknownSubName: Full=Uncharacterized protein; chromosome CDS160842 1047 - 0.34384
NA RC0203 unknownRecName: Full=Putative zinc metalloprotease RC0203; EC=3.4.24.-; chromosome CDS211613 1077 - 0.325905
NA RC0486 unknownRecName: Full=Putative polysaccharide polymerase RC0486; chromosome CDS480850 1236 - 0.31877
NA RC0318 similarity to D-alanyl-D-alanine dipeptidaseSubName: Full=D-alanyl-D-alanine dipeptidase-like protein; EC=2.3.1.129; chromosome CDS321190 162 + 0.265432
NA RC0570 unknownSubName: Full=Uncharacterized protein; chromosome CDS560770 297 - 0.377104
NA RC0971 unknownSubName: Full=Uncharacterized protein; chromosome CDS912990 333 - 0.288288
NA RC1282 unknownRecName: Full=Uncharacterized protein RC1282; Flags: Precursor; chromosome CDS1189761 684 - 0.350877
NA RC1054 unknownSubName: Full=Uncharacterized protein; chromosome CDS978598 753 + 0.302789
NA RC0456 putative dTDP-4-dehydrorhamnose reductase. [EC:1.1.1.133]SubName: Full=Putative dTDP-4-dehydrorhamnose reductase; EC=2.3.1.129; chromosome CDS451127 855 + 0.34386
NA RC1060 similarity to lipopolysaccharide biosynthesis proteinSubName: Full=Lipopolysaccharide biosynthesis protein-like protein; EC=2.3.1.129; chromosome CDS984554 318 + 0.27673
NA RC0317 similarity to D-alanyl-D-alanine dipeptidaseSubName: Full=D-alanyl-D-alanine dipeptidase-like protein; EC=2.3.1.129; chromosome CDS320651 201 + 0.263682
NA RC0462 unknownSubName: Full=Uncharacterized protein; chromosome CDS458126 999 - 0.324324
NA RC1076 unknownSubName: Full=Uncharacterized protein; chromosome CDS997120 1359 + 0.32156
NA RC0352 unknownSubName: Full=Uncharacterized protein; chromosome CDS354436 555 + 0.311712
NA RC1055 unknownSubName: Full=Uncharacterized protein; chromosome CDS979440 801 + 0.29588
NA RC0073 unknownSubName: Full=Uncharacterized protein; chromosome CDS65822 1164 + 0.280069
NA RC0571 unknownSubName: Full=Uncharacterized protein; chromosome CDS561354 219 - 0.365297
alr RC0128 alanine racemase [EC:5.1.1.1]RecName: Full=Alanine racemase; EC=5.1.1.1; chromosome CDS123583 1068 + 0.347378
aprE RC0428 alkaline protease secretion protein AprESubName: Full=Alkaline protease secretion protein AprE; EC=2.3.1.129; chromosome CDS424292 1536 - 0.337891
asmA RC0472 outer membrane assembly proteinSubName: Full=Outer membrane assembly protein; EC=2.3.1.129; chromosome CDS468181 2520 - 0.305556
capD RC0457 capD proteinRecName: Full=UDP-glucose 4-epimerase; EC=5.1.3.2; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase; chromosome CDS452164 1026 + 0.346979
capM1 RC0465 capM proteinSubName: Full=CapM protein; EC=2.3.1.129; chromosome CDS460820 1173 + 0.323103
capM2 RC0575 capM proteinSubName: Full=CapM protein; EC=2.3.1.129; chromosome CDS562945 1017 - 0.306785
ctp RC0310 tail-specific protease precursor [EC:3.4.21.-]SubName: Full=Tail-specific protease; EC=2.3.1.129; chromosome CDS313004 1410 + 0.335461
dacF RC0536 penicillin-binding protein dacF precursor [EC:3.4.16.4]SubName: Full=Penicillin-binding protein dacF; EC=2.3.1.129; chromosome CDS527234 921 + 0.352877
dapA RC0595 dihydrodipicolinate synthase [EC:4.2.1.52]RecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; chromosome CDS582251 885 + 0.335593
ddlB RC0333 D-alanine--D-alanine ligase [EC:6.3.2.4]RecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; chromosome CDS334395 966 + 0.343685
ftsQ RC0334 cell division protein ftsQRecName: Full=Cell division protein FtsQ; chromosome CDS335357 804 + 0.288557
gidB RC0085 glucose inhibited division protein BRecName: Full=Ribosomal RNA small subunit methyltransferase G; EC=2.1.1.170; AltName: Full=16S rRNA 7-methylguanosine methyltransferase; Short=16S rRNA m7G methyltransferase; chromosome CDS78820 579 + 0.253886
glmU RC0680 UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23]SubName: Full=UDP-N-acetylglucosamine pyrophosphorylase; EC=2.3.1.129; chromosome CDS659867 747 - 0.302544
htrB RC1091 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]SubName: Full=Lipid A biosynthesis lauroyl acyltransferase; EC=2.3.1.129; chromosome CDS1016982 873 - 0.332188
kdsA RC0090 2-dehydro-3-deoxyphosphooctonate aldolase [EC:4.1.2.16]RecName: Full=2-dehydro-3-deoxyphosphooctonate aldolase; EC=2.5.1.55; AltName: Full=3-deoxy-D-manno-octulosonic acid 8-phosphate synthase; AltName: Full=KDO-8-phosphate synthase; Short=KDO 8-P synthase; Short=KDOPS; AltName: Full=Phospho-2-dehydro-3-deoxyoctonate aldolase; chromosome CDS83290 825 + 0.353939
kdsB RC0524 3-deoxy-manno-octulosonate cytidylyltransferase [EC:2.7.7.38]RecName: Full=3-deoxy-manno-octulosonate cytidylyltransferase; EC=2.7.7.38; AltName: Full=CMP-2-keto-3-deoxyoctulosonic acid synthase; Short=CKS; Short=CMP-KDO synthase; chromosome CDS514186 741 - 0.354926
kdtA RC0118 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.-.-.-]RecName: Full=3-deoxy-D-manno-octulosonic acid transferase; Short=Kdo transferase; EC=2.4.99.12; AltName: Full=Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase; chromosome CDS115894 1395 - 0.337634
lepA RC0369 GTP-binding protein lepARecName: Full=Elongation factor 4; Short=EF-4; EC=3.6.5.n1; AltName: Full=Ribosomal back-translocase LepA; chromosome CDS366751 1803 + 0.39157
lgt RC0072 prolipoprotein diacylglyceryl transferase [EC:2.4.99.-]RecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; chromosome CDS64798 780 - 0.314103
lgtD RC0623 glycosyl transferaseSubName: Full=Glycosyl transferase; EC=2.3.1.129; chromosome CDS606531 846 + 0.308511
lgtF RC0292 beta 1,4 glucosyltransferaseRecName: Full=Uncharacterized glycosyltransferase RC0292; EC=2.4.-.-; chromosome CDS295138 849 + 0.32391
lnt RC0495 apolipoprotein N-acyltransferase [EC:2.3.1.-]RecName: Full=Apolipoprotein N-acyltransferase; Short=ALP N-acyltransferase; EC=2.3.1.-; chromosome CDS488746 1500 + 0.300667
lpxA RC0008 acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase [EC:2.3.1.129]RecName: Full=Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Short=UDP-N-acetylglucosamine acyltransferase; EC=2.3.1.129; chromosome CDS6611 795 - 0.369811
lpxB RC0440 lipid-A-disaccharide synthase [EC:2.4.1.182]RecName: Full=Lipid-A-disaccharide synthase; EC=2.4.1.182; chromosome CDS434593 1341 + 0.321402
lpxC RC0339 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.-]RecName: Full=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; EC=3.5.1.-; AltName: Full=UDP-3-O-acyl-GlcNAc deacetylase; chromosome CDS339846 876 - 0.328767
lpxD RC0010 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.-]RecName: Full=UDP-3-O-acylglucosamine N-acyltransferase; EC=2.3.1.-; chromosome CDS8046 1041 - 0.354467
lpxK RC1092 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]RecName: Full=Tetraacyldisaccharide 4-kinase; EC=2.7.1.130; AltName: Full=Lipid A 4-kinase; chromosome CDS1017829 966 - 0.307453
lspA RC0558 lipoprotein signal peptidase [EC:3.4.23.36]RecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; chromosome CDS550300 621 + 0.302738
mraY1 RC0910 phospho-N-acetylmuramoyl-pentapeptide-transferas e[EC:2.7.8.13]RecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; chromosome CDS854314 1086 - 0.342541
mraY2 RC1279 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase [EC:2.4.1.-]SubName: Full=Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; EC=2.3.1.129; chromosome CDS1187068 984 + 0.305894
mreC RC1197 rod shape-determining protein mreCRecName: Full=Cell shape-determining protein MreC; AltName: Full=Cell shape protein MreC; chromosome CDS1092878 840 - 0.291667
murA RC0883 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]RecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase; Short=EPT; chromosome CDS829105 1260 - 0.363492
murB RC0332 UDP-N-acetylenolpyruvoylglucosamine reductase [EC:1.1.1.158]RecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; EC=1.3.1.98; AltName: Full=UDP-N-acetylmuramate dehydrogenase; chromosome CDS333015 1137 + 0.346526
murD RC0560 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]RecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; chromosome CDS551492 1503 + 0.333333
murE RC0912 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase [EC:6.3.2.13]RecName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; EC=6.3.2.13; AltName: Full=Meso-A2pm-adding enzyme; AltName: Full=Meso-diaminopimelate-adding enzyme; AltName: Full=UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase; AltName: Full=UDP-MurNAc-tripeptide synthetase; AltName: Full=UDP-N-acetylmuramyl-tripeptide synthetase; chromosome CDS857151 1440 - 0.316667
murF RC0911 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanyl ligase [EC:6.3.2.15]RecName: Full=Probable UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; AltName: Full=D-alanyl-D-alanine-adding enzyme; AltName: Full=UDP-MurNAc-pentapeptide synthetase; chromosome CDS855594 1350 - 0.312593
murG RC0562 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.-]RecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; chromosome CDS554256 1131 + 0.335102
nlpD RC0403 outer membrane antigenic lipoprotein B precursorSubName: Full=Outer membrane antigenic lipoprotein B; EC=2.3.1.129; chromosome CDS403487 675 + 0.308148
omp RC1287 17 kD surface antigen precursorRecName: Full=17 kDa surface antigen; Flags: Precursor; chromosome CDS1193390 480 + 0.4375
omp1 RC0202 outer membrane protein omp1RecName: Full=Outer membrane protein assembly factor BamA; Flags: Precursor; chromosome CDS209068 2307 - 0.320329
ostA RC1024 organic solvent tolerance protein homologRecName: Full=LPS-assembly protein LptD; Flags: Precursor; chromosome CDS950538 2142 - 0.316993
pal RC1200 peptidoglycan-associated lipoprotein precursorSubName: Full=Peptidoglycan-associated lipoprotein; EC=2.3.1.129; chromosome CDS1096487 468 - 0.363248
pbpA1 RC0852 penicillin-binding proteinSubName: Full=Penicillin-binding protein; EC=2.3.1.129; chromosome CDS803229 1782 - 0.345118
pbpA2 RC0855 penicillin-binding proteinSubName: Full=Penicillin-binding protein; EC=2.3.1.129; chromosome CDS806140 1686 - 0.343416
pbpC RC0249 bifunctional penicillin-binding protein 1CSubName: Full=Bifunctional penicillin-binding protein 1C; EC=2.3.1.129; chromosome CDS255730 2391 - 0.33877
rfbA RC0004 O-antigen export system permease protein RfbASubName: Full=O-antigen export system permease protein RfbA; EC=2.3.1.129; chromosome CDS2117 777 + 0.290862
rfbE RC0003 O-antigen export system ATP-binding protein RfbESubName: Full=O-antigen export system ATP-binding protein RfbE; EC=2.3.1.129; chromosome CDS1367 750 + 0.296
rffE RC0458 putative UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14]SubName: Full=Putative UDP-N-acetylglucosamine 2-epimerase; EC=2.3.1.129; chromosome CDS453182 1134 + 0.356261
rlpA RC0537 rare lipoprotein A precursorRecName: Full=RlpA-like protein; chromosome CDS528324 963 - 0.305296
slt RC0547 putative soluble lytic murein transglycosylase precursorSubName: Full=Putative soluble lytic murein transglycosylase; EC=2.3.1.129; chromosome CDS536471 1962 + 0.312946
tolC RC0306 outer membrane protein tolC precursorSubName: Full=Outer membrane protein tolC; chromosome CDS307039 1362 + 0.368576
udg RC1212 UDP-glucose 6-dehydrogenaseRecName: Full=UDP-glucose 6-dehydrogenase; Short=UDP-Glc dehydrogenase; Short=UDP-GlcDH; Short=UDPGDH; EC=1.1.1.22; chromosome CDS1109376 1299 - 0.30485
vacJ RC0123 vacJ lipoprotein precursorRecName: Full=Uncharacterized protein RC0123; Flags: Precursor; chromosome CDS120938 783 + 0.348659