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2024-05-03 09:23:02

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Candidatus Pelagibacter ubique HTCC1062, HTCC1062

Number of genes found: 100

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Candidatus Pelagibacter ubique HTCC1062, HTCC1062
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SAR11_0556 glycosyl transferasechromosome CDS549536 1134 - 0.212522
NA SAR11_0538 UDP-glucose 4 epimerasechromosome CDS531418 939 + 0.250266
NA SAR11_1015 NAD dependent epimerase/dehydratase fchromosome CDS994615 813 + 0.226322
NA SAR11_0633 Glycosyl transferasechromosome CDS619869 873 + 0.269187
NA SAR11_0566 O-Antigen Polymerasechromosome CDS556732 1314 + 0.218417
NA SAR11_1012 Glycosyl transferases group 1chromosome CDS990598 2106 + 0.238367
NA SAR11_0997 unknownchromosome CDS977370 759 + 0.221344
NA SAR11_0855 peptidasechromosome CDS824837 801 - 0.29588
NA SAR11_0499 probable NADH-ubiquinone oxireductasechromosome CDS486635 969 + 0.285862
NA SAR11_1014 putative pyridoxamine 5-phosphate-dependent dehydrasechromosome CDS993416 1203 + 0.257689
NA SAR11_1332 unknownchromosome CDS1267165 1209 + 0.223325
NA SAR11_0672 Cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS656313 1179 + 0.246819
NA SAR11_1726 unknown proteinchromosome CDS555992 147 - 0.238095
NA SAR11_1017 unknownchromosome CDS996113 954 + 0.219078
NA SAR11_0557 glycosyl transferase familychromosome CDS550866 978 + 0.203476
NA SAR11_0935 Peptidase M50chromosome CDS919763 2103 + 0.291013
NA SAR11_0076 Predicted nucleoside-diphosphate-sugar epimerasechromosome CDS90548 945 - 0.26455
NA SAR11_0325 Outer membrane lipoprotein carrier proteinchromosome CDS323636 555 + 0.216216
NA SAR11_0534 aminotransferasechromosome CDS526790 1350 + 0.231852
NA SAR11_0535 deoxynucleotidasechromosome CDS528210 1455 - 0.175945
NA SAR11_0214 multi-domain proteinchromosome CDS215418 747 + 0.211513
NA SAR11_0632 conserved hypothetical proteinchromosome CDS618580 1293 + 0.259087
NA SAR11_0564 putative reductasechromosome CDS556146 189 - 0.285714
NA SAR11_0078 possible NAD dependent epimerase/dehydratase proteinchromosome CDS92500 1020 + 0.321569
NA SAR11_0435 nucleoside-diphosphate-sugar epimeraseschromosome CDS429007 876 + 0.255708
NA SAR11_0194 nucleotidyltransferase family proteinchromosome CDS195106 690 - 0.218841
NA SAR11_0934 AcrB-like proteinchromosome CDS918432 1335 + 0.292135
NA SAR11_0308 Mechanosensitive ion channelchromosome CDS304847 1086 - 0.292818
NA SAR11_0553 DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS546079 1128 + 0.278369
NA SAR11_0525 NAD dependent epimerase/dehydratase familychromosome CDS517419 855 + 0.223392
NA SAR11_0177 Glycosyltransferase family 9 (heptosyltransferase)chromosome CDS179815 939 + 0.260916
NA SAR11_0816 membrane-associated zinc metalloproteasechromosome CDS790317 1134 + 0.31746
NA SAR11_0526 NAD dependent epimerase/dehydratase familychromosome CDS518270 864 - 0.236111
NA SAR11_0175 dapA-like proteinchromosome CDS177954 885 - 0.299435
NA SAR11_0567 unknown proteinchromosome CDS558028 1002 - 0.196607
acrA SAR11_0933 AcrA-like proteinchromosome CDS917722 714 + 0.312325
amsK SAR11_1200 glycosyl transferasechromosome CDS1149702 1026 + 0.291423
capM SAR11_0437 glycosyl transferasechromosome CDS430651 1155 + 0.284848
cfa SAR11_1144 cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS1097307 1191 - 0.282116
ctpA SAR11_0227 tail-specific proteinasechromosome CDS225758 1140 + 0.30614
dacC SAR11_0998 serine-type D-Ala-D-Ala carboxypeptidasechromosome CDS978121 1152 + 0.30816
dapA SAR11_1062 dihydrodipicolinate synthasechromosome CDS1028616 882 - 0.333333
ddlB SAR11_0021 D-alanine--D-alanine ligase Bchromosome CDS23211 915 - 0.266667
ecpD SAR11_1216 Fimbrial protein pilin precursorchromosome CDS1163669 570 + 0.350877
ftsI SAR11_0029 cell division protein FtsIchromosome CDS33835 1677 - 0.27251
ftsQ SAR11_0020 cell division protein FtsQchromosome CDS22553 678 - 0.224189
galE SAR11_0569 UDPglucose 4-epimerasechromosome CDS560488 957 + 0.229885
galU SAR11_1087 probable UTP-glucose-1-phosphate uridylyltransferase pXO1-94chromosome CDS1053581 816 - 0.252451
gidB SAR11_0352 Glucose inhibited division proteinchromosome CDS344954 642 + 0.232087
glmS SAR11_1151 glutamine-fructose-6-phosphate transaminase (isomerizing)chromosome CDS1105201 1821 - 0.310818
glmU SAR11_1152 UDP-N-acetylglucosamine diphosphorylasechromosome CDS1107023 624 - 0.274038
gmd SAR11_0570 GDPmannose 4,6-dehydratasechromosome CDS561627 1044 + 0.297893
gmdA SAR11_0176 GDP-mannose 4,6-dehydratasechromosome CDS178883 936 + 0.223291
htrB SAR11_0151 lipid A biosynthesis lauroyl acyltransferasechromosome CDS154687 861 + 0.243902
kdsA SAR11_0938 2-dehydro-3-deoxy-phosphooctonate aldolasechromosome CDS924264 825 + 0.338182
kdsB SAR11_0505 3-deoxy-manno-octulosonate cytidylyltransferasechromosome CDS491948 741 + 0.272605
kdtA SAR11_0148 3-deoxy-D-manno-octulosonic-acid transferasechromosome CDS152513 1263 + 0.239113
lepA SAR11_0444 GTP-Binding protein lepAchromosome CDS438405 1809 + 0.321725
lgt SAR11_0091 prolipoprotein diacylglyceryl transferasechromosome CDS104566 771 + 0.287938
lgtF SAR11_0552 spsA-like proteinchromosome CDS545259 834 + 0.235012
lnt SAR11_0386 apolipoprotein N-acyltransferase (copper homeostasis protein)chromosome CDS375981 1545 + 0.233657
lpxA SAR11_0917 acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferasechromosome CDS882260 783 + 0.314176
lpxB SAR11_0919 lipid-A-disaccharide synthase (lpxB)chromosome CDS883826 1137 + 0.233069
lpxC SAR11_0018 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (UDP-3-O-acyl-GlcNAc deacetylase)chromosome CDS20458 921 - 0.282302
lpxD SAR11_0916 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase RP009chromosome CDS881283 981 + 0.276249
lpxK SAR11_0149 tetraacyldisaccharide 4'-kinasechromosome CDS153756 945 + 0.245503
lspA SAR11_0157 Lipoprotein signal peptidasechromosome CDS159167 501 - 0.243513
lytB SAR11_0124 4-hydroxy-3-methylbut-2-enyl diphosphate reductasechromosome CDS133762 945 + 0.316402
mltB SAR11_0996 membrane-bound lytic transglycolase-related proteinchromosome CDS976379 1002 + 0.266467
mraW SAR11_0031 S-adenosyl-methyltransferasechromosome CDS35809 1011 - 0.271019
mraY SAR11_0027 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS29906 1086 - 0.290055
mrcA SAR11_0732 penicillin-binding protein 1Achromosome CDS713746 2334 + 0.289203
mreC SAR11_1372 rod shape-determining protein MreCchromosome CDS1305440 651 - 0.271889
murA SAR11_0473 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS463398 1254 + 0.30303
murB SAR11_0022 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS24127 909 - 0.272827
murC SAR11_0023 UDP-N-acetylmuramate--L-alanine ligasechromosome CDS25035 1395 - 0.270251
murD SAR11_0026 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS28611 1296 - 0.204475
murEF SAR11_0028 UDP-N-acetylmuramoylalanyl-D-glutamatechromosome CDS30981 2847 - 0.233579
murG SAR11_0024 UDP-N-acetylglucosaminechromosome CDS26419 1071 - 0.235294
omp1 SAR11_0913 outer membrane protein omp1chromosome CDS878022 2238 + 0.266756
ompA SAR11_0598 OmpA familychromosome CDS583474 480 + 0.322917
ompH SAR11_0914 Outer membrane protein (OmpH-like)chromosome CDS880259 525 + 0.192381
pbpA SAR11_1370 Penicillin binding protein transpeptidechromosome CDS1302965 1968 - 0.298781
racX SAR11_1277 Aspartate racemasechromosome CDS1211265 747 + 0.271754
rfaD SAR11_0572 ADP-L-glycero-D-mannoheptose-6-epimerasechromosome CDS563601 879 + 0.248009
rfaE SAR11_0539 cytidylyltransferase/carbohydrate (or pyrimidine) kinasechromosome CDS532349 1509 + 0.248509
rfaF SAR11_1206 heptosyltransferase family proteinchromosome CDS1154993 933 - 0.275456
rfaG SAR11_0550 glycosyl transferase family 28chromosome CDS543013 1113 - 0.237197
rfaK SAR11_0559 1,2-N-acetylglucosaminetransferasechromosome CDS552525 1071 - 0.222222
rfbB SAR11_0541 dTDPglucose 4,6-dehydratasechromosome CDS534588 990 + 0.240404
slt SAR11_1063 putative soluble lytic murein transglycosylase precursor (slt)chromosome CDS1029539 2214 + 0.296748
spsA SAR11_0540 spsA-like glycosyl transferasechromosome CDS533858 723 + 0.211618
tolC SAR11_0640 Outer membrane protein TolCchromosome CDS624419 1299 + 0.297921
ugd SAR11_1086 UDPglucose 6-dehydrogenasechromosome CDS1052286 1299 - 0.26251
vacJ SAR11_0035 lipoprotein precursorchromosome CDS40261 786 + 0.324427
wbyL SAR11_0563 glycosyl transferasechromosome CDS555224 768 - 0.21224
wcaG SAR11_0571 GDP-fucose synthetase chain Achromosome CDS562663 939 + 0.250266
ycfU SAR11_0903 ABC transporterchromosome CDS867843 1233 + 0.261963
yebA SAR11_0521 M23/M37 peptidasechromosome CDS509729 1299 - 0.25866
yhil SAR11_0190 HlyD family-related proteinchromosome CDS189379 870 + 0.271264