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2024-05-02 18:20:31

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Psychrobacter arcticum 273-4, 273-4

Number of genes found: 141

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Psychrobacter arcticum 273-4, 273-4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Psyc_1301 betaine/choline/carnitine/glycine transporter, BCCT familychromosome CDS1566327 2049 - 0.440703
NA Psyc_0404 conserved hypothetical proteinchromosome CDS508533 585 + 0.432479
NA Psyc_1575 RND membrane fusion protein AcrAchromosome CDS1927044 1347 + 0.485523
NA Psyc_1592 conserved hypothetical proteinchromosome CDS1948535 654 - 0.461774
NA Psyc_0702 conserved hypothetical proteinchromosome CDS834959 1305 + 0.438314
NA Psyc_0256 possible ribonuclease EGchromosome CDS307312 4218 - 0.457563
NA Psyc_0242 conserved hypothetical proteinchromosome CDS288187 1761 + 0.367973
NA Psyc_0353 conserved hypothetical proteinchromosome CDS440145 690 - 0.452174
NA Psyc_0397 hypothetical proteinchromosome CDS499186 348 + 0.465517
NA Psyc_1204 possible bacterial lipid A biosynthesis acyltransferasechromosome CDS1446374 978 + 0.43456
NA Psyc_0440 probable N-acetylmuramoyl-L-alanine amidasechromosome CDS550716 546 - 0.483516
NA Psyc_1241 hypothetical proteinchromosome CDS1490582 531 - 0.472693
NA Psyc_0767 small-conductance mechanosensitive ion channelchromosome CDS917799 1206 - 0.44859
NA Psyc_0128 hypothetical proteinchromosome CDS151802 495 - 0.412121
NA Psyc_0670 probable glycosyl transferase, group 1chromosome CDS794672 1116 + 0.416667
NA Psyc_1863 hypothetical proteinchromosome CDS2290156 825 - 0.458182
NA Psyc_0657 probable polysaccharide biosynthesis proteinchromosome CDS780321 1050 + 0.392381
NA Psyc_0874 hypothetical proteinchromosome CDS1041266 480 + 0.354167
NA Psyc_1765 possible soluble lytic murein transglycosylasechromosome CDS2173190 2220 - 0.462162
NA Psyc_0908 outer membrane protein, OmpA/MotB familychromosome CDS1087658 519 - 0.50289
NA Psyc_1530 putative membrane-associated zinc metalloproteasechromosome CDS1871791 1374 - 0.455604
NA Psyc_1510 conserved Hypothetical proteinchromosome CDS1837804 3138 - 0.450924
NA Psyc_0662 hypothetical proteinchromosome CDS784248 585 + 0.422222
NA Psyc_0649 putative lipopolysaccharide biosynthesis tyrosine kinasechromosome CDS769434 2262 + 0.390363
NA Psyc_0826 choline/glycine betaine transporter, BCCT familychromosome CDS992104 1653 + 0.438596
NA Psyc_0445 probable prophage LambdaSo, tail assembly protein Kchromosome CDS556066 750 - 0.429333
NA Psyc_1755 possible nucleoside-diphosphate-sugar epimerasechromosome CDS2161706 840 - 0.457143
NA Psyc_0079 conserved hypothetical proteinchromosome CDS90323 1113 + 0.434861
NA Psyc_1273 probable membrane-bound lytic murein transglycosylase D precursorchromosome CDS1532054 3006 - 0.464737
NA Psyc_0660 NeuB family protein with antifreeze-like domainschromosome CDS782538 1050 + 0.391429
NA Psyc_1529 putative bacterial surface antigen (D15)chromosome CDS1869116 2412 - 0.434494
NA Psyc_0650 putative UDP-glucose/GDP-mannose dehydrogenasechromosome CDS771887 1278 + 0.392019
NA Psyc_1952 probable transglycolasechromosome CDS2404530 1476 + 0.448509
NA Psyc_0110 conserved hypothetical proteinchromosome CDS131165 1431 + 0.431866
NA Psyc_0352 possible lytic transglycosylasechromosome CDS438893 822 - 0.43309
NA Psyc_0667 probable glycosyl transferase, group 1chromosome CDS790409 1083 + 0.385965
NA Psyc_0473 hypothetical proteinchromosome CDS580383 276 + 0.40942
NA Psyc_0691 possible membrane-bound lytic murein transglycosylasechromosome CDS821152 1305 + 0.477395
NA Psyc_1760 probable phosphinothricin acetyltransferasechromosome CDS2167992 651 - 0.420891
NA Psyc_0624 conserved hypothetical proteinchromosome CDS741705 972 + 0.486626
NA Psyc_1973 hypothetical proteinchromosome CDS2433691 864 + 0.399306
NA Psyc_1457 possible ErfK/YbiS/YcfS/YnhG protein familychromosome CDS1768415 1422 + 0.437412
NA Psyc_1486 possible oxidoreductasechromosome CDS1806524 702 - 0.41453
NA Psyc_0672 hypothetical proteinchromosome CDS797379 1479 + 0.481406
NA Psyc_1600 possible outer membrane efflux protein, OMF familychromosome CDS1957402 1545 - 0.435599
NA Psyc_1567 bacterial lipid A biosynthesis acyltransferasechromosome CDS1918735 1092 + 0.446886
NA Psyc_1819 hypothetical proteinchromosome CDS2237312 1119 + 0.44504
NA Psyc_1517 probable nucleotidyl transferasechromosome CDS1851432 741 - 0.454791
NA Psyc_0405 conserved hypothetical proteinchromosome CDS509429 603 + 0.447761
NA Psyc_0625 small-conductance mechanosensitive ion channelchromosome CDS742743 876 + 0.430365
NA Psyc_1598 hlyD family secretion proteinchromosome CDS1953960 1170 - 0.44188
NA Psyc_1506 hypothetical proteinchromosome CDS1829741 738 - 0.407859
NA Psyc_0884 hypothetical proteinchromosome CDS1056504 693 + 0.373737
NA Psyc_0575 hypothetical proteinchromosome CDS680078 660 - 0.483333
NA Psyc_0651 NAD-dependent epimerasechromosome CDS773340 1035 + 0.419324
NA Psyc_0704 probable D-alanyl-D-alanine carboxypeptidasechromosome CDS837666 1092 + 0.451465
NA Psyc_1954 probable aspartate/glutamate racemasechromosome CDS2407053 993 - 0.434038
NA Psyc_1158 possible glycosyl transferasechromosome CDS1384982 741 - 0.452092
NA Psyc_1272 probable soluble lytic transglycosylasechromosome CDS1530723 1209 + 0.438379
NA Psyc_1207 probable glycosyl transferase family 25, LPS biosynthesischromosome CDS1450235 768 + 0.382812
NA Psyc_1805 outer membrane protein, OmpA/OmpF familychromosome CDS2218442 654 - 0.461774
NA Psyc_1206 probable Glycosyl transferase, family 2chromosome CDS1448669 1566 + 0.388889
NA Psyc_0654 putative DegT/DnrJ/EryC1/StrS aminotransferasechromosome CDS777378 1158 + 0.38601
NA Psyc_0727 choline/carnitine/betaine transporter, BCCT familychromosome CDS865068 2046 - 0.458944
NA Psyc_0033 hypothetical proteinchromosome CDS37523 624 - 0.405449
NA Psyc_0174 hypothetical proteinchromosome CDS201438 639 - 0.456964
NA Psyc_0928 possible rare lipoprotein A familychromosome CDS1111229 621 - 0.442834
NA Psyc_2056 probable S-adenosyl-methyltransferasechromosome CDS2529143 1155 - 0.468398
NA Psyc_0690 conserved hypothetical proteinchromosome CDS820256 819 + 0.485958
NA Psyc_0970 possible small-conductance mechanosensitive ion channelchromosome CDS1163157 1953 + 0.421915
NA Psyc_2084 RND efflux membrane fusion proteinchromosome CDS2561454 1284 - 0.481308
NA Psyc_0655 probable glycosyl transferasechromosome CDS778547 1041 + 0.308357
NA Psyc_0664 probable Glycosyl transferase, group 1chromosome CDS786060 1086 + 0.381215
NA Psyc_1921 probable metallopeptidases peptidasechromosome CDS2369784 591 + 0.473773
NA Psyc_1602 outer membrane protein OprF, OmpA/OmpF familychromosome CDS1979536 723 - 0.40249
NA Psyc_1656 putative outer membrane protein/scaffolding protein MipAchromosome CDS2049196 813 + 0.464945
NA Psyc_2010 probable 3-oxoacyl-(acyl-carrier-protein) synthase IIchromosome CDS2476423 885 + 0.454237
NA Psyc_0280 possible outer membrane protein, OmpA familychromosome CDS338964 1602 + 0.467541
NA Psyc_1648 putative monofunctional biosynthetic peptidoglycan transglycosylasechromosome CDS2039183 687 - 0.426492
NA Psyc_0811 possible glycosyl transferasechromosome CDS972553 1230 - 0.439837
alr Psyc_0958 alanine racemasechromosome CDS1143289 1107 - 0.467028
capD Psyc_0653 polysaccharide biosynthesis protein CapDchromosome CDS776379 999 + 0.391391
cfa Psyc_0741 putative cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS884571 1365 + 0.445421
dacC Psyc_0687 probable D-alanyl-D-alanine carboxypeptidase 1, S11 familychromosome CDS817287 1167 - 0.445587
dapA Psyc_0148 probable dihydrodipicolinate synthasechromosome CDS177480 906 + 0.47351
ddlB Psyc_1749 probable D-alanine--D-alanine ligase Bchromosome CDS2154516 1101 - 0.4505
dgkA Psyc_1164 probable diacylglycerol kinasechromosome CDS1392132 444 + 0.38964
ftsI Psyc_2054 possible penicillin-binding protein 3 (transpeptidase)chromosome CDS2526367 2088 - 0.472222
ftsQ Psyc_1747 possible cell division protein FtsQchromosome CDS2152064 828 - 0.437198
galE Psyc_0107 UDP-glucose 4-epimerasechromosome CDS127483 1032 + 0.417636
galU Psyc_0108 possible glucosephosphate uridylyltransferasechromosome CDS128569 885 + 0.425989
gidB Psyc_1321 probable glucose inhibited division proteinchromosome CDS1591491 717 - 0.429568
glmS Psyc_2074 probable glucosamine-fructose-6-phosphate aminotransferasechromosome CDS2549306 1845 + 0.459079
glmU Psyc_2073 probable UDP-N-acetylglucosamine pyrophosphorylase / diamine N-acetyltransferasechromosome CDS2547763 1377 + 0.456064
kdsA Psyc_1640 putative 2-dehydro-3-deoxyphosphooctonate aldolase proteinchromosome CDS2026896 876 - 0.461187
kdsB Psyc_1314 probable acylneuraminate cytidylyltransferasechromosome CDS1584020 807 - 0.45601
kdtA Psyc_1549 possible three-deoxy-D-manno-octulosonic-acid transferasechromosome CDS1897307 1569 - 0.458254
lepA Psyc_0330 GTP-binding protein LepAchromosome CDS409080 1797 + 0.451864
lnt possible apolipoprotein N-acyltransferasechromosome CDS2437575 1575 - 0.460317
lolA Psyc_1571 probable outer membrane lipoprotein carrierchromosome CDS1922898 702 - 0.423077
lolE Psyc_0781 ABC lipoprotein exporter, inner membrane subunit, LolEchromosome CDS933257 1236 + 0.452265
lpxA Psyc_1526 putativeacyl-(acyl-carrier-protein)--UDP-N-acety lglucosamineO-acyltransferasechromosome CDS1866370 780 - 0.455128
lpxB Psyc_0911 probable lipidA disaccharide synthetasechromosome CDS1092893 1302 + 0.479263
lpxC Psyc_1744 probable UDP-3-0-acyl N-acetylglucosamine deacetylasechromosome CDS2147782 963 - 0.392523
lpxD Psyc_1528 probable UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxDchromosome CDS1867949 1038 - 0.476879
lpxK Psyc_1315 probable tetraacyldisaccharide-1-P 4'-kinasechromosome CDS1584870 1158 - 0.445596
lspA Psyc_0363 probable signal peptidase IIchromosome CDS450659 516 - 0.447674
lytB Psyc_1722 hydroxymethylbutenyl pyrophosphate reductasechromosome CDS2122039 957 - 0.469175
macA Psyc_0573 macrolide secretion protein MacA, HlyD familychromosome CDS677216 1368 - 0.468567
mpl Psyc_0032 putativeUDP-N-acetylmuramate:L-alanyl-gamma-D- glutamyl-meso- diaminopimelate ligasechromosome CDS35713 1518 - 0.442029
mraY Psyc_2051 probablephospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS2521871 1119 - 0.460232
mrcA Psyc_1884 probable penicillin-binding protein 1Achromosome CDS2320996 2607 + 0.451477
mrcB Psyc_1468 probable penicillin-binding protein transpeptidase domainchromosome CDS1783417 2484 + 0.453704
mreC Psyc_0484 possible rod shape-determining protein MreCchromosome CDS590985 861 + 0.445993
mreD Psyc_0485 possible rod shape-determining protein MreDchromosome CDS591993 486 + 0.399177
mscL Psyc_0340 large-conductance mechanosensitive channel MscLchromosome CDS421373 438 + 0.381279
murA Psyc_1904 probable UDP-N-acetylglucosamine 1-carboxyvinyltransferasechromosome CDS2352430 1269 - 0.481481
murB Psyc_0948 probable UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS1133386 1122 - 0.459002
murC Psyc_1750 putative UDP-N-acetylmuramate--alanine ligasechromosome CDS2155660 1440 - 0.453472
murD Psyc_2040 probable UDP-N-acetylmuramoylalanine--D-glutamate ligasechromosome CDS2508808 1431 - 0.473096
murE Psyc_2053 probableUDP-N-acetylmuramoylalanyl-D-glutamate-2 ,6-diaminopimelateligasechromosome CDS2524541 1755 - 0.467236
murF Psyc_2052 probableUDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanineligasechromosome CDS2522993 1458 - 0.460905
murG Psyc_1751 probableUDP-N-acetylglucosamine--N- acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome CDS2157169 1086 - 0.470534
neuA2 Psyc_0656 putative Acylneuraminate cytidylyltransferasechromosome CDS779584 687 + 0.411936
ompN Psyc_1642 possible porin, gram-negative typechromosome CDS2030108 1098 - 0.407104
ompW Psyc_1326 probable outer membrane protein, OmpW familychromosome CDS1599243 630 + 0.407937
oprF Psyc_0338 probable outer membrane proteinchromosome CDS417594 1185 + 0.437131
oprM Psyc_1577 outer membrane efflux protein, OprMchromosome CDS1931653 1821 + 0.465129
ostA Psyc_1519 possible organic solvent tolerance proteinchromosome CDS1853684 2739 + 0.431544
pb Psyc_1563 putative penicillin-binding proteinchromosome CDS1914699 1995 + 0.451128
pldA Psyc_0231 probable outer membrane phospholipase Achromosome CDS276220 1437 + 0.453027
prc Psyc_0282 possible carboxyl-terminal proteasechromosome CDS342390 2214 + 0.443089
rfbA Psyc_1214 glucose-1-phosphate thymidylyltransferasechromosome CDS1457034 891 + 0.402918
rfbC Psyc_1215 putative dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS1457952 573 + 0.417103
rfbD Psyc_1213 putative dTDP-4-dehydrorhamnose reductasechromosome CDS1456132 906 + 0.392936
rfbP1 Psyc_0671 probable bacterial sugar transferasechromosome CDS796077 1248 + 0.367788
rffG Psyc_1212 dTDP-glucose 4,6-dehydratasechromosome CDS1455014 1083 + 0.423823
rlpA Psyc_0038 putative lipoprotein Achromosome CDS43911 369 - 0.406504
tonB Psyc_1664 TonB/TolA energy transducing proteinchromosome CDS2060877 1014 - 0.476331
wza Psyc_0647 probable polysaccharide export system, outer membrane componentchromosome CDS767827 1077 + 0.439183
yfdH Psyc_0642 putative glycosyl transferasechromosome CDS761794 915 + 0.345355