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2024-04-29 05:43:56

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Rickettsia felis URRWXCal2, URRWXCal2; California 2

Number of genes found: 88

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Rickettsia felis URRWXCal2, URRWXCal2; California 2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RF_0228 unknownchromosome CDS253385 765 - 0.313726
NA RF_0443 unknownchromosome CDS471342 972 - 0.368313
NA RF_0544 Efflux transporter, RND family, MFP subunitchromosome CDS580490 996 - 0.324297
NA RF_0538 dTDP-4-dehydrorhamnose reductasechromosome CDS573036 858 + 0.350816
NA RF_1363 unknownchromosome CDS1453565 624 + 0.253205
NA RF_0892 unknownchromosome CDS954918 315 - 0.393651
NA RF_1170 unknownchromosome CDS1242238 1185 + 0.344304
NA RF_1120 Membrane-associated zinc metalloproteasechromosome CDS1187015 1074 + 0.329609
NA RF_0132 Conserved hypothetical membrane proteinchromosome CDS149311 1167 - 0.272494
NA RF_0047 Cell surface antigen-like protein Sca10chromosome CDS49122 1479 + 0.3881
NA RF_1313 unknownchromosome CDS1400827 870 - 0.341379
NA RF_0643 RND efflux system, outer membrane proteinchromosome CDS688389 1392 - 0.35704
NA RF_0195 Periplasmic proteinchromosome CDS212154 855 + 0.306433
NA RF_1016 unknownchromosome CDS1075863 549 - 0.307832
NA RF_0543 Two-domain glycosyltransferasechromosome CDS578677 1809 + 0.276949
NA RF_1137 Penicillin acylasechromosome CDS1205230 1134 + 0.320988
NA RF_0221 Putative oxidoreductase proteinchromosome CDS243817 1296 - 0.297839
NA RF_0996 D-alanyl-D-alanine dipeptidasechromosome CDS1058481 744 + 0.294355
NA RF_0098 unknownchromosome CDS112672 285 + 0.340351
NA RF_1314 Putative outer surface proteinchromosome CDS1401994 684 - 0.345029
NA RF_0547 Glycosyltransferasechromosome CDS583489 1173 + 0.327366
NA RF_0407 Glycosyltransferasechromosome CDS425843 1935 + 0.281654
NA RF_0211 Lipoprotein releasing system, transmembrane proteinchromosome CDS233960 1248 - 0.320513
NA RF_1027 unknownchromosome CDS1089264 738 + 0.279133
NA RF_1253 unknownchromosome CDS1329349 714 + 0.316527
NA RF_0223 unknownchromosome CDS247570 1197 + 0.304094
NA RF_0644 Glycosyltransferasechromosome CDS689991 1017 - 0.293019
NA RF_0227 unknownchromosome CDS252508 732 - 0.297814
alr RF_0079 Alanine racemasechromosome CDS85356 1389 + 0.355652
aprE RF_0510 Alkaline protease secretion protein AprEchromosome CDS544565 1536 - 0.334635
asmA RF_0553 Outer membrane assembly proteinchromosome CDS590865 2526 - 0.298496
capD RF_0539 CapD proteinchromosome CDS574092 1026 + 0.353801
ctp RF_0989 Carboxyl-terminal proteasechromosome CDS1050402 1359 + 0.33039
cutE RF_0576 Apolipoprotein N-acyltransferasechromosome CDS612146 1491 + 0.30114
dacF RF_0609 Penicillin-binding protein DacF precursorchromosome CDS652755 921 + 0.34962
dapA RF_0660 Dihydrodipicolinate synthasechromosome CDS708190 885 + 0.338983
ddlB RF_1035 D-alanine--D-alanine ligasechromosome CDS1097605 966 - 0.346791
ftsQ RF_1034 Cell division protein FtsQchromosome CDS1096805 804 - 0.28607
gidB RF_0118 Predicted S-adenosylmethionine-dependent methyltransferase GidBchromosome CDS135246 579 - 0.243523
glmU RF_0798 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS848444 747 - 0.299866
htrB RF_0197 Lipid A biosynthesis lauroyl acyltransferasechromosome CDS214110 873 + 0.332188
kdsA RF_0113 3-deoxy-8-phosphooctulonate synthasechromosome CDS130596 825 - 0.349091
kdsB RF_0594 3-deoxy-manno-octulosonate cytidylyltransferasechromosome CDS638950 741 - 0.350877
kdtA RF_0072 3-deoxy-D-manno-octulosonic-acid transferasechromosome CDS78264 1395 - 0.332616
lepA RF_1000 GTP-binding protein LepAchromosome CDS1061492 1803 - 0.39046
lgt RF_0133 Prolipoprotein diacylglyceryl transferasechromosome CDS150719 780 + 0.303846
lgtD RF_0686 Glycosyltransferasechromosome CDS732490 846 + 0.314421
lgtF RF_0337 Beta 1,4 glucosyltransferasechromosome CDS356452 852 + 0.335681
lpxA RF_0006 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferasechromosome CDS6426 795 - 0.383648
lpxB RF_0519 Lipid-A-disaccharide synthasechromosome CDS554105 1173 + 0.321398
lpxC RF_1028 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylasechromosome CDS1090184 867 + 0.329873
lpxD RF_0008 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferasechromosome CDS7897 1041 - 0.352546
lpxK RF_0196 Tetraacyldisaccharide 4'-kinasechromosome CDS213170 978 + 0.297546
lspA RF_0632 Lipoprotein signal peptidasechromosome CDS676817 717 + 0.320781
manC RF_0241 Mannose-1-phosphate guanylyltransferasechromosome CDS268356 1038 - 0.301541
mfp RF_0642 Membrane-fusion protein component of the RND family transporterchromosome CDS686973 1260 - 0.354762
mltE1 RF_0621 Soluble lytic murein transglycosylase precursorchromosome CDS661993 2076 + 0.321291
mltE2 RF_0803 Putative soluble lytic murein transglycosylasechromosome CDS852133 840 + 0.345238
mraW RF_0904 S-adenosyl-methyltransferase MraWchromosome CDS968137 921 - 0.365907
mraY1 RF_0370 Phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS391722 1086 + 0.339779
mraY2 RF_1311 Undecaprenyl-phosphatealpha-N-acetylglucosaminyltransferasechromosome CDS1399093 984 + 0.321138
mrcA RF_1276 Penicillin-binding protein 1A familychromosome CDS1355126 2373 - 0.363675
mreC RF_1231 Rod shape-determining protein MreCchromosome CDS1295748 840 - 0.289286
murA RF_0945 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS1003234 1260 - 0.36746
murB RF_1036 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS1098696 888 - 0.336712
murC RF_1037 UDP-N-acetylmuramate--alanine ligasechromosome CDS1099926 1437 - 0.332637
murD RF_0634 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS678060 1350 + 0.316296
murE RF_0368 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligasechromosome CDS388467 1593 + 0.333961
murF RF_0369 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligasechromosome CDS390179 1350 + 0.311111
murG RF_0636 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome CDS680620 1083 + 0.309326
nlpD2 RF_0631 Membrane proteins related to metalloendopeptidaseschromosome CDS675424 1365 + 0.316484
omp RF_1321 17 kDa surface antigen precursorchromosome CDS1406412 480 + 0.441667
omp1 RF_1121 Outer membrane protein omp1chromosome CDS1188336 2307 + 0.326831
ompW RF_0060 OmpW family outer-membrane proteinchromosome CDS61597 735 - 0.352381
ostA RF_0254 Organic solvent tolerance protein homologchromosome CDS282464 2142 + 0.313726
pal RF_1234 Peptidoglycan-associated lipoprotein precursorchromosome CDS1299521 471 - 0.363057
pbpA1 RF_0900 Penicillin-binding proteinchromosome CDS962736 1785 - 0.35014
pbpA2 RF_0902 Penicillin-binding proteinchromosome CDS965706 1686 - 0.345196
pbpC RF_1069 Bifunctional penicillin-binding protein 1Cchromosome CDS1134697 2325 + 0.341075
rfaJ RF_0836 Lipopolysaccharide 1,2-glucosyltransferase RfaJchromosome CDS881280 1554 + 0.281853
rfbA RF_0004 O-antigen export system permease protein RfbAchromosome CDS2264 777 + 0.290862
rfbE RF_0003 O-antigen export system ATP-binding protein RfbEchromosome CDS1381 744 + 0.299731
rffE RF_0540 UDP-N-acetylglucosamine 2-epimerasechromosome CDS575110 1134 + 0.362434
rlpA RF_0611 Rare lipoprotein A precursorchromosome CDS654029 693 - 0.279942
tagD RF_0630 Glycerol-3-phosphate cytidyltransferase TagDchromosome CDS674685 555 - 0.273874
tolC RF_0985 Type I secretion outer membrane protein, TolC familychromosome CDS1044264 1365 + 0.364835
udg RF_1245 UDP-glucose 6-dehydrogenasechromosome CDS1314369 1347 - 0.313289
vacJ RF_0076 VacJ lipoprotein precursorchromosome CDS82925 756 + 0.354497