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2024-04-29 07:30:47

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Xanthomonas campestris pv. campestris str. 8004, 8004

Number of genes found: 241

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Xanthomonas campestris pv. campestris str. 8004, 8004
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA XC_1660 GumD proteinchromosome CDS1996080 1455 + 0.610309
NA XC_3851 conserved hypothetical proteinchromosome CDS4549577 924 - 0.63961
NA XC_1176 penicillin-binding protein 1Bchromosome CDS1424547 2445 + 0.678119
NA XC_0415 conserved hypothetical proteinchromosome CDS481158 2466 + 0.646391
NA XC_3633 membrane subunit of LPS efflux transporterchromosome CDS4314992 792 - 0.546717
NA XC_3816 conserved hypothetical proteinchromosome CDS4510515 1671 - 0.676242
NA XC_2910 cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS3495344 1371 + 0.666667
NA XC_3517 cell division proteinchromosome CDS4178720 1029 - 0.678328
NA XC_1498 lipoproteinchromosome CDS1804459 651 + 0.689708
NA XC_3694 outer membrane proteinchromosome CDS4381397 678 + 0.647493
NA XC_3859 membrane fusion protein precursorchromosome CDS4559787 1239 + 0.686037
NA XC_3300 outer membrane proteinchromosome CDS3951095 1098 - 0.625683
NA XC_3634 glycosyltransferasechromosome CDS4315861 1386 - 0.580808
NA XC_2171 strX proteinchromosome CDS2616338 582 + 0.649485
NA XC_3288 non-hemolytic phospholipase Cchromosome CDS3936515 2082 - 0.662824
NA XC_1328 nucleotidyl transferasechromosome CDS1614668 711 - 0.658228
NA XC_2020 conserved hypothetical proteinchromosome CDS2435115 1929 - 0.602385
NA XC_0652 outer membrane lipoproteinchromosome CDS786144 624 - 0.641026
NA XC_3360 outer membrane lipoprotein precursorchromosome CDS4009074 657 - 0.713851
NA XC_2877 UDP-N-acetylglucosamine acyltransferasechromosome CDS3457660 792 + 0.681818
NA XC_1816 N-acetylmuramoyl-L-alanine amidasechromosome CDS2207623 1692 + 0.682624
NA XC_2410 conserved hypothetical proteinchromosome CDS2917898 1329 - 0.559067
NA XC_0209 glycosyltransferasechromosome CDS258299 810 + 0.637037
NA XC_0453 conserved hypothetical proteinchromosome CDS540968 666 + 0.714715
NA XC_3878 conserved hypothetical proteinchromosome CDS4581930 1347 + 0.688938
NA XC_3086 lipoprotein signal peptidasechromosome CDS3696569 504 - 0.632937
NA XC_2411 conserved hypothetical proteinchromosome CDS2919432 3795 - 0.601845
NA XC_2947 conserved hypothetical proteinchromosome CDS3531674 561 + 0.680927
NA XC_3660 conserved hypothetical proteinchromosome CDS4345359 927 + 0.597627
NA XC_3259 murein hydrolase Dchromosome CDS3900122 1167 + 0.678663
NA XC_2042 conserved hypothetical proteinchromosome CDS2456714 582 - 0.719931
NA XC_3809 phosphinothricin acetyltransferasechromosome CDS4503174 522 - 0.653257
NA XC_0008 TonB proteinchromosome CDS10559 672 + 0.636905
NA XC_3507 cell division proteinchromosome CDS4166536 837 - 0.645161
NA XC_0867 conserved hypothetical proteinchromosome CDS1045828 549 - 0.460838
NA XC_2558 glycosyl transferasechromosome CDS3092583 939 - 0.57934
NA XC_0607 conserved hypothetical proteinchromosome CDS724130 1080 - 0.685185
NA XC_1857 peptidasechromosome CDS2253714 846 - 0.685579
NA XC_4176 conserved hypothetical proteinchromosome CDS4928719 1941 - 0.646574
NA XC_3815 conserved hypothetical proteinchromosome CDS4509086 1290 - 0.677519
NA XC_4159 RTS beta proteinchromosome CDS4902564 1326 + 0.670437
NA XC_3999 acriflavin resistance proteinchromosome CDS4714750 1140 + 0.668421
NA XC_2913 conserved hypothetical proteinchromosome CDS3498053 1071 + 0.662932
NA XC_2169 glucose-1-phosphate cytidylyltransferasechromosome CDS2614514 774 + 0.635659
NA XC_1434 outer membrane proteinchromosome CDS1731551 1494 + 0.674699
NA XC_2796 outer membrane proteinchromosome CDS3361927 1425 - 0.678596
NA XC_1375 UDP-N-acetylmuramoylalanine-D-glutamate ligasechromosome CDS1660894 1407 + 0.692253
NA XC_0650 conserved hypothetical proteinchromosome CDS783963 801 - 0.645443
NA XC_3235 conserved hypothetical proteinchromosome CDS3879529 501 - 0.666667
NA XC_1930 UTP-glucose-1-phosphate uridylyltransferasechromosome CDS2329624 894 + 0.628635
NA XC_0714 tail-specific proteasechromosome CDS857115 2184 + 0.644689
NA XC_0416 phosphoglycerol transferase Ichromosome CDS484652 2082 - 0.648415
NA XC_1990 conserved hypothetical proteinchromosome CDS2400934 1065 - 0.642254
NA XC_1318 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS1605922 1275 + 0.676863
NA XC_3664 ABC transporter permeasechromosome CDS4350872 1272 + 0.69261
NA XC_1658 GumB proteinchromosome CDS1993775 642 + 0.621495
NA XC_3617 aminotransferasechromosome CDS4297786 1104 + 0.65308
NA XC_2170 putative epimerase/dehydratasechromosome CDS2615292 1050 + 0.657143
NA XC_1970 cation efflux system proteinchromosome CDS2376198 1116 + 0.671147
NA XC_0432 outer membrane proteinchromosome CDS511621 1473 - 0.727766
NA XC_1701 dihydrodipicolinate synthetasechromosome CDS2041005 909 + 0.657866
NA XC_2802 outer membrane proteinchromosome CDS3371582 726 - 0.669421
NA XC_2522 lipoproteinchromosome CDS3054429 801 - 0.681648
NA XC_1181 TonB proteinchromosome CDS1432362 876 - 0.699772
NA XC_2091 polysaccharide biosynthetic proteinchromosome CDS2515416 1293 + 0.661253
NA XC_3504 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylasechromosome CDS4162648 912 - 0.629386
NA XC_0708 penicillin-binding protein 6chromosome CDS851073 1212 + 0.651815
NA XC_0434 component of multidrug efflux systemchromosome CDS513876 1116 + 0.72491
NA XC_2488 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolasechromosome CDS3017958 1149 + 0.641427
NA XC_2592 RhsD proteinchromosome CDS3125910 4398 - 0.583902
NA XC_3202 penicillin-binding protein 1Cchromosome CDS3836182 2424 - 0.697195
NA XC_2606 unknown acidic aa rich proteinchromosome CDS3143687 4017 - 0.636794
NA XC_2472 N-acetylmuramoyl-L-alanine amidasechromosome CDS2989411 1161 - 0.66236
NA XC_1665 GumI proteinchromosome CDS2002280 1050 + 0.650476
NA XC_3437 organic solvent tolerance precursorchromosome CDS4085606 2430 + 0.604527
NA XC_3960 outer membrane lipoprotein Blcchromosome CDS4678144 558 + 0.637993
NA XC_2551 hexosyltransferasechromosome CDS3085254 1164 - 0.697595
NA XC_2733 UDP-glucose dehydrogenasechromosome CDS3284437 1347 - 0.633259
NA XC_0229 NAD(P)H steroid dehydrogenasechromosome CDS277811 1014 + 0.653846
NA XC_0762 high-affinity choline transportchromosome CDS917298 1980 - 0.637879
NA XC_0706 membrane-bound lytic transglycosylasechromosome CDS848453 1140 + 0.666667
NA XC_2493 dihydroxydipicolinate synthasechromosome CDS3022021 909 - 0.70187
NA XC_2818 phospholipasechromosome CDS3388226 1131 + 0.6313
NA XC_2875 UDP-3-O-(R-3-hydroxymyristoyl)-glucosamineN-acyl transferasechromosome CDS3456167 1014 + 0.656805
NA XC_3502 peptidasechromosome CDS4161067 945 - 0.669841
NA XC_3808 lipid A biosynthesis lauroyl acyltransferasechromosome CDS4502120 915 + 0.703825
NA XC_3508 D-alanine-D-alanine ligase Bchromosome CDS4167479 957 - 0.681296
NA XC_0263 conserved hypothetical proteinchromosome CDS317438 648 - 0.669753
NA XC_3612 glucose-1-phosphate thymidylyltransferasechromosome CDS4293405 891 - 0.598204
NA XC_0707 rare lipoprotein Achromosome CDS849589 1356 + 0.691003
NA XC_1748 multidrug resistance proteinchromosome CDS2117763 1311 - 0.701754
NA XC_4126 cation efflux system proteinchromosome CDS4863081 1482 - 0.68556
NA XC_2533 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS3062826 831 - 0.624549
NA XC_0645 periplasmic glucan biosynthesis proteinchromosome CDS778114 1938 + 0.676987
NA XC_4001 conserved hypothetical proteinchromosome CDS4717038 1161 + 0.6236
NA XC_2758 outer membrane component of multidrug efflux pumpchromosome CDS3313614 1404 + 0.663818
NA XC_0461 conserved hypothetical proteinchromosome CDS547841 936 + 0.702991
NA XC_3629 membrane protein WxcDchromosome CDS4308497 1743 - 0.586919
NA XC_0232 D-alanine-D-alanine ligase Achromosome CDS279629 1122 - 0.666667
NA XC_3445 prolipoprotein diacylglyceryl transferasechromosome CDS4094625 891 - 0.664422
NA XC_0942 penicillin-binding protein 1Achromosome CDS1129888 2523 + 0.656361
NA XC_1997 3-deoxy-manno-octulosonate cytidylyltransferasechromosome CDS2408894 753 + 0.693227
NA XC_2935 conserved hypothetical proteinchromosome CDS3520541 567 + 0.624339
NA XC_0828 TolC proteinchromosome CDS995033 1374 - 0.593886
NA XC_1535 lipoproteinchromosome CDS1843598 576 - 0.640625
NA XC_1988 lipoprotein releasing system transmembrane proteinchromosome CDS2398323 1251 + 0.621902
NA XC_3874 conserved hypothetical proteinchromosome CDS4577664 1362 - 0.562408
NA XC_3769 UDP-galactopyranose mutasechromosome CDS4459277 1197 + 0.641604
NA XC_3449 diacylglycerol kinasechromosome CDS4098056 381 - 0.669291
NA XC_2211 outer-membrane lipoproteins carrier protein precursorchromosome CDS2664292 630 - 0.634921
NA XC_2642 TonB-like proteinchromosome CDS3180684 597 + 0.680067
NA XC_2449 UDP-N-acetylpyruvoylglucosamine reductasechromosome CDS2962859 1053 + 0.663818
NA XC_3613 dTDP-glucose-4,6-dehydratasechromosome CDS4294356 1056 - 0.620265
NA XC_0694 penicillin-binding protein 2chromosome CDS833235 2061 + 0.689471
NA XC_3509 UDP-N-acetylmuramate-alanine ligasechromosome CDS4168432 1434 - 0.679916
NA XC_0021 carboxyl-terminal proteasechromosome CDS24035 1581 - 0.678684
NA XC_1669 GumM proteinchromosome CDS2006935 792 + 0.666667
NA XC_3312 membrane proteinchromosome CDS3966843 1128 - 0.656915
NA XC_0567 conserved hypothetical proteinchromosome CDS679556 948 - 0.728903
NA XC_0693 rod shape-determining proteinchromosome CDS832746 486 + 0.67284
NA XC_1245 glucosyl transferasechromosome CDS1524121 1044 + 0.65613
NA XC_1682 outer membrane lipoproteinchromosome CDS2021758 537 - 0.675978
NA XC_0758 soluble lytic murein transglycosylasechromosome CDS908168 2034 - 0.694199
NA XC_0825 membrane proteinchromosome CDS990363 1335 + 0.700375
NA XC_1250 conserved hypothetical proteinchromosome CDS1530009 855 - 0.726316
NA XC_4057 TonB-like proteinchromosome CDS4776599 1008 + 0.71131
NA XC_3515 penicillin-binding protein 3chromosome CDS4176542 1872 - 0.679487
NA XC_3610 dTDP-4-dehydrorhamnose reductasechromosome CDS4291946 909 - 0.643564
NA XC_2878 lipid A disaccharide synthasechromosome CDS3458568 1197 + 0.678363
NA XC_1432 multidrug resistance proteinchromosome CDS1727200 1200 + 0.706667
NA XC_0951 glucarate hydratasechromosome CDS1142266 1356 - 0.653392
NA XC_4130 glucose inhibited division protein Bchromosome CDS4868450 639 - 0.697966
NA XC_0705 endopolygalacturonasechromosome CDS846698 1401 + 0.62955
NA XC_2839 outer membrane efflux proteinchromosome CDS3413769 1515 - 0.711551
NA XC_0954 5-dehydro-4-deoxyglucarate dehydratasechromosome CDS1146700 918 - 0.674292
NA XC_3937 nucleotide sugar epimerasechromosome CDS4649795 966 + 0.675983
NA XC_4127 cation efflux system proteinchromosome CDS4864559 1266 - 0.722749
NA XC_3252 saccharide biosynthesis regulatory proteinchromosome CDS3894630 1047 + 0.674308
NA XC_3240 outer membrane protein Slpchromosome CDS3885783 537 + 0.681564
NA XC_3630 glycosyltransferasechromosome CDS4310260 1080 - 0.551852
NA XC_1244 monofunctional biosynthetic peptidoglycan transglycosylasechromosome CDS1523369 741 + 0.678812
NA XC_2552 glycosyltransferasechromosome CDS3086363 1125 - 0.691556
NA XC_3514 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligasechromosome CDS4175058 1488 - 0.692876
NA XC_3513 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligasechromosome CDS4173727 1314 - 0.702435
NA XC_3510 UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome CDS4169862 1284 - 0.688474
NA XC_3734 conserved hypothetical proteinchromosome CDS4420270 453 + 0.646799
NA XC_1009 large-conductance mechanosensitive channelchromosome CDS1222188 432 - 0.599537
NA XC_1951 small conductance mechanosensitive ion channelchromosome CDS2354572 960 - 0.638542
NA XC_3627 putative GDP-mannose 4,6-dehydratasechromosome CDS4306746 1035 - 0.558454
NA XC_0499 conserved hypothetical proteinchromosome CDS588630 453 + 0.684327
NA XC_2641 conserved hypothetical proteinchromosome CDS3179854 750 + 0.705333
NA XC_3475 conserved hypothetical proteinchromosome CDS4129486 1296 - 0.685185
NA XC_3085 penicillin tolerance proteinchromosome CDS3695483 951 - 0.67613
NA XC_3172 glycosyl hydrolasechromosome CDS3801568 1320 - 0.614394
NA XC_2101 conserved hypothetical proteinchromosome CDS2527323 423 - 0.70922
NA XC_0824 glycosyl transferasechromosome CDS989270 1113 + 0.713387
NA XC_3663 glucosamine-fructose-6-phosphateaminotransferasechromosome CDS4348839 1830 - 0.648087
NA XC_1142 outer membrane protein P6 precursorchromosome CDS1384681 519 + 0.635838
NA XC_3626 UDP-glucose 4-epimerasechromosome CDS4305824 939 - 0.600639
NA XC_2872 conserved hypothetical proteinchromosome CDS3451958 1347 + 0.682257
NA XC_3512 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS4172506 1086 - 0.635359
NA XC_2757 RND efflux membrane fusion proteinchromosome CDS3312532 1086 + 0.698895
NA XC_3127 conserved hypothetical proteinchromosome CDS3734179 1767 + 0.695529
NA XC_2352 conserved hypothetical proteinchromosome CDS2843819 540 - 0.631481
NA XC_1247 conserved hypothetical proteinchromosome CDS1525562 1956 - 0.653885
NA XC_0826 lipid A biosynthesis lauroyl acyltransferasechromosome CDS991951 921 - 0.666667
NA XC_3741 conserved hypothetical proteinchromosome CDS4428602 696 + 0.676724
NA XC_0995 RND efflux membrane fusion proteinchromosome CDS1195877 1086 + 0.686004
NA XC_0771 conserved hypothetical proteinchromosome CDS927674 1098 + 0.668488
NA XC_2787 conserved hypothetical proteinchromosome CDS3352442 717 - 0.531381
NA XC_4257 outer membrane efflux proteinchromosome CDS5048860 1452 + 0.721074
NA XC_3373 xylanasechromosome CDS4022120 1218 - 0.633005
NA XC_1862 hypothetical proteinchromosome CDS2257423 270 + 0.674074
NA XC_0920 conserved hypothetical proteinchromosome CDS1104012 975 + 0.673846
NA XC_3768 conserved hypothetical proteinchromosome CDS4458105 1185 + 0.658228
NA XC_3611 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS4292851 558 - 0.582437
NA XC_3001 Hpa2 proteinchromosome CDS3596348 417 - 0.57554
NA XC_4195 starvation sensing proteinchromosome CDS4953809 1260 + 0.65873
NA XC_2911 conserved hypothetical proteinchromosome CDS3496711 546 + 0.705128
NA XC_0970 outer membrane proteinchromosome CDS1163065 624 - 0.653846
NA XC_0969 outer membrane proteinchromosome CDS1162331 615 - 0.630894
NA XC_3276 glycosyl transferasechromosome CDS3923683 1137 + 0.671064
NA XC_3674 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS4361531 1365 - 0.683517
NA XC_1918 phosphinothricin N-acetyltransferasechromosome CDS2318664 528 - 0.659091
NA XC_4215 outer membrane lipoproteinchromosome CDS4983741 549 + 0.650273
NA XC_2873 outer membrane antigenchromosome CDS3453301 2457 + 0.610094
NA XC_0874 UDP-N-acetylmuramate-L-alanine ligasechromosome CDS1052805 1359 + 0.674761
NA XC_2799 RND multidrug efflux membrane fusion proteinchromosome CDS3367462 1191 - 0.668346
NA XC_2317 conserved hypothetical proteinchromosome CDS2800103 798 + 0.642857
NA XC_0078 conserved hypothetical proteinchromosome CDS91994 657 - 0.700152
NA XC_2258 O-antigen biosynthesis proteinchromosome CDS2717231 3612 + 0.643688
NA XC_2971 GTP binding proteinchromosome CDS3554646 1806 - 0.615725
NA XC_2451 putative resistance proteinchromosome CDS2964961 705 + 0.646809
NA XC_1674 NAD(P)H steroid dehydrogenasechromosome CDS2011552 960 + 0.655208
NA XC_3718 alanine racemasechromosome CDS4404984 1083 - 0.685134
NA XC_1504 TonB-like proteinchromosome CDS1810239 681 - 0.685756
NA XC_3111 conserved hypothetical proteinchromosome CDS3723360 627 + 0.682616
NA XC_3618 glycosyltransferasechromosome CDS4298874 972 + 0.609053
NA XC_3814 lipopolysaccharide core biosynthesis glycosyl transferasechromosome CDS4508277 825 + 0.664242
NA XC_1741 RpfN proteinchromosome CDS2105796 1137 - 0.652595
NA XC_1775 outer membrane protein OprN precursorchromosome CDS2159468 1512 + 0.71164
NA XC_1534 conserved hypothetical proteinchromosome CDS1842745 744 - 0.681452
NA XC_3873 D-alanyl-D-alanine dipeptidasechromosome CDS4576644 705 - 0.666667
NA XC_1121 phospholipase Cchromosome CDS1358468 2148 - 0.700186
NA XC_1929 epimerase/dehydratase proteinchromosome CDS2327786 1839 + 0.643828
NA XC_3767 UDP-glucose 4-epimerasechromosome CDS4456918 1152 + 0.670139
NA XC_0333 oxidoreductasechromosome CDS394602 888 - 0.708333
NA XC_3813 conserved hypothetical proteinchromosome CDS4507218 1059 - 0.672332
NA XC_2242 flagellar proteinchromosome CDS2700104 1086 + 0.677716
NA XC_1928 lipopolysaccharide core biosynthesis proteinchromosome CDS2326729 975 + 0.626667
NA XC_0428 conserved hypothetical proteinchromosome CDS506650 681 + 0.687225
NA XC_3305 conserved hypothetical proteinchromosome CDS3959469 513 + 0.60039
NA XC_1354 peptidasechromosome CDS1638890 591 - 0.680203
NA XC_1664 GumH proteinchromosome CDS2001141 1143 + 0.619423
NA XC_0921 conserved hypothetical proteinchromosome CDS1104990 732 + 0.662568
NA XC_2254 nucleotide sugar transaminasechromosome CDS2713064 1290 + 0.623256
NA XC_4089 dolichyl-phosphate mannose synthase related proteinchromosome CDS4817357 822 + 0.677616
NA XC_3938 dolichol-phosphate mannosyltransferasechromosome CDS4650840 723 + 0.679115
NA XC_4301 lipoproteinchromosome CDS5101018 1065 + 0.719249
NA XC_3879 chloromuconate cycloisomerasechromosome CDS4583273 1095 + 0.661187
NA XC_1072 conserved hypothetical proteinchromosome CDS1289462 507 + 0.688363
NA XC_3632 ATP binding component of ABC-transporterchromosome CDS4313709 1287 - 0.573427
NA XC_2556 conserved hypothetical proteinchromosome CDS3090553 906 - 0.678808
NA XC_2560 aminotransferasechromosome CDS3094768 1143 - 0.647419
NA XC_0753 glucosamine-fructose-6-phosphateaminotransferasechromosome CDS899551 999 + 0.688689
NA XC_3926 conserved hypothetical proteinchromosome CDS4639668 1419 + 0.659619
NA XC_0136 RhsD proteinchromosome CDS165263 4245 + 0.570554
NA XC_3234 conserved hypothetical proteinchromosome CDS3879049 426 - 0.624413
NA XC_0755 nisin-resistance proteinchromosome CDS902417 975 + 0.659487
NA XC_0692 rod shape-determining proteinchromosome CDS831400 1350 + 0.713333
NA XC_4282 conserved hypothetical proteinchromosome CDS5075988 1350 - 0.572593
NA XC_0174 ABC transporter amino acid permeasechromosome CDS216439 1473 + 0.671419
NA XC_1659 GumC proteinchromosome CDS1994488 1350 + 0.605926
NA XC_1791 soluble lytic murein transglycosylasechromosome CDS2177755 969 + 0.679051
NA XC_0827 3-deoxy-D-manno-octulosonic acid transferasechromosome CDS993302 1320 + 0.675
NA XC_0738 type II secretion system protein Cchromosome CDS885245 804 + 0.695274
NA XC_1996 lipid A 4'-kinasechromosome CDS2407701 1056 + 0.684659
NA XC_1561 membrane-bound lytic murein transglycosylase D precursorchromosome CDS1879032 1416 + 0.670904
NA XC_3555 conserved hypothetical proteinchromosome CDS4219564 1344 - 0.602679
NA XC_2588 glycosyl transferase-related proteinchromosome CDS3121305 720 + 0.693056
NA XC_3236 conserved hypothetical proteinchromosome CDS3880049 1857 - 0.670975