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2024-05-26 01:51:00

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Staphylococcus epidermidis RP62A phage SP-beta

Number of genes found: 106

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Staphylococcus epidermidis RP62A phage SP-beta
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SERP2421 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2480169 888 - 0.310811
NA SERP0996 carboxyl-terminal proteaseRecName: Full=Probable CtpA-like serine protease; EC=3.4.21.-; chromosome CDS1012526 1476 - 0.312331
NA SERP1294 transglycosylase domain proteinSubName: Full=Transglycosylase domain protein; chromosome CDS1340351 906 + 0.316777
NA SERP2054 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; chromosome CDS2077256 1491 - 0.29175
NA SERP0275 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS280211 954 - 0.265199
NA SERP0386 ABC transporter, permease proteinSubName: Full=ABC transporter, permease protein; chromosome CDS386108 1515 + 0.329373
NA SERP0294 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS296468 747 - 0.303882
NA SERP2210 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; chromosome CDS2245847 2334 - 0.287489
NA SERP0208 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; chromosome CDS219501 1503 - 0.297405
NA SERP0296 tagH protein, teichoic acid ABC transporter protein, putativeRecName: Full=Teichoic acids export ATP-binding protein TagH; EC=3.6.3.40; chromosome CDS298225 795 - 0.309434
NA SERP0227 penicillin V acylase, putativeSubName: Full=Penicillin V acylase, putative; chromosome CDS235619 981 - 0.316004
NA SERP0363 glycosyl transferase, group 2 family proteinSubName: Full=Glycosyl transferase, group 2 family protein; chromosome CDS363278 1107 + 0.31075
NA SERP1014 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1059035 639 - 0.333333
NA SERP1956 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; chromosome CDS1972366 1146 + 0.321117
NA SERP0207 sdrG proteinSubName: Full=SdrG protein; chromosome CDS216458 2679 + 0.33296
NA SERP2244 capA-related proteinSubName: Full=CapA-related protein; chromosome CDS2271458 1167 - 0.337618
NA SERP0379 sulfatase family proteinRecName: Full=Lipoteichoic acid synthase; Contains: RecName: Full=Glycerol phosphate lipoteichoic acid synthase; Short=LTA synthase; EC=2.7.8.-; AltName: Full=Polyglycerol phosphate synthase; Contains: RecName: Full=Processed glycerol phosphate lipoteichoic acid synthase; chromosome CDS375930 1941 + 0.32509
NA SERP0299 teichoic acid biosynthesis protein X, putativeSubName: Full=Teichoic acid biosynthesis protein X, putative; chromosome CDS301577 1065 + 0.34554
NA SERP1408 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1472825 831 - 0.273165
NA SERP2116 conserved hypothetical protein TIGR00659RecName: Full=Holin-like protein CidB; chromosome CDS2141687 690 - 0.330435
NA SERP2356 amino acid ABC transporter, amino acid-binding proteinSubName: Full=Amino acid ABC transporter, amino acid-binding protein; chromosome CDS2401891 960 - 0.351042
NA SERP2320 choline/carnitine/betaine transporterSubName: Full=Choline/carnitine/betaine transporter; chromosome CDS2357317 1593 + 0.338983
NA SERP2179 choline/carnitine/betaine transporterSubName: Full=Choline/carnitine/betaine transporter; chromosome CDS2211424 1605 - 0.353894
NA SERP0829 membrane-associated zinc metalloprotease, putativeSubName: Full=Membrane-associated zinc metalloprotease, putative; chromosome CDS832744 1287 + 0.328671
NA SERP1958 TagF domain proteinSubName: Full=TagF domain protein; chromosome CDS1975667 1680 + 0.294048
NA SERP0749 cell division protein FtsQ, putativeRecName: Full=Cell division protein DivIB; chromosome CDS746749 1392 + 0.298132
NA SERP0311 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS314542 924 + 0.329004
NA SERP1717 UDP-N-acetylglucosamine 2-epimeraseRecName: Full=UDP-N-acetylglucosamine 2-epimerase; EC=5.1.3.14; chromosome CDS1755916 1146 - 0.339442
NA SERP1568 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1605889 240 - 0.2625
NA SERP0194 UDP-glucose 4-epimerase, putativeRecName: Full=Uncharacterized epimerase/dehydratase SERP0194; chromosome CDS202608 957 + 0.337513
NA SERP1048 elastin binding protein, putativeRecName: Full=Probable elastin-binding protein EbpS; chromosome CDS1094204 1383 - 0.341287
NA SERP0217 SIS domain proteinSubName: Full=SIS domain protein; chromosome CDS227245 549 + 0.336976
NA SERP1412 transglycosylase domain proteinRecName: Full=Monofunctional glycosyltransferase; Short=MGT; EC=2.4.-.-; AltName: Full=Peptidoglycan TGase; chromosome CDS1476585 810 - 0.290123
NA SERP2274 conserved hypothetical proteinRecName: Full=Glycosyltransferase stabilizing protein Gtf2; chromosome CDS2306039 1341 - 0.319911
NA SERP0414 glycosyl transferase, group 4 family proteinSubName: Full=Glycosyl transferase, group 4 family protein; chromosome CDS414923 1080 + 0.322222
NA SERP0039 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS36497 876 + 0.311644
NA SERP0920 choline/carnitine/betaine transporterSubName: Full=Choline/carnitine/betaine transporter; chromosome CDS930290 1641 + 0.354052
NA SERP1212 rod shape-determining protein MreD, putativeSubName: Full=Rod shape-determining protein MreD, putative; chromosome CDS1248796 522 - 0.249042
NA SERP2209 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS2244112 1545 - 0.350162
NA SERP2275 glycosyl transferase, group 1 family proteinRecName: Full=Glycosyltransferase Gtf1; EC=2.4.1.-; chromosome CDS2307372 1509 - 0.340623
NA SERP1028 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; chromosome CDS1074331 1143 - 0.341207
NA SERP1754 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1791022 657 - 0.316591
NA SERP1690 D-alanine--D-alanine ligaseRecName: Full=D-alanine--D-alanine ligase; EC=6.3.2.4; AltName: Full=D-Ala-D-Ala ligase; AltName: Full=D-alanylalanine synthetase; chromosome CDS1733954 1074 - 0.311918
NA SERP0014 RND family efflux transporter, MFP componentSubName: Full=RND family efflux transporter, MFP component; chromosome CDS9780 1119 + 0.320822
NA SERP1640 M23/M37 peptidase domain proteinSubName: Full=M23/M37 peptidase domain protein; chromosome CDS1663368 8274 + 0.339739
NA SERP0101 glycosyl transferase, group 1 family proteinSubName: Full=Glycosyl transferase, group 1 family protein; chromosome CDS86000 1506 - 0.295485
NA SERP1409 ABC transporter, ATP-binding proteinSubName: Full=ABC transporter, ATP-binding protein; chromosome CDS1473664 1518 - 0.306324
NA SERP0318 LysM domain proteinSubName: Full=LysM domain protein; chromosome CDS322334 801 - 0.367041
NA SERP0018 lipase, putativeSubName: Full=Lipase, putative; chromosome CDS13768 2046 + 0.350929
NA SERP0422 LysM domain proteinSubName: Full=LysM domain protein; chromosome CDS425270 801 + 0.362047
NA SERP0969 alanine racemase family proteinRecName: Full=Alanine racemase; EC=5.1.1.1; chromosome CDS987489 1074 + 0.299814
NA SERP1430 Mur ligase family proteinSubName: Full=Mur ligase family protein; chromosome CDS1491431 1314 - 0.334094
NA SERP1152 GTP-binding protein LepARecName: Full=Elongation factor 4; Short=EF-4; EC=3.6.5.n1; AltName: Full=Ribosomal back-translocase LepA; chromosome CDS1189342 1824 - 0.337719
NA SERP0198 teichoic acid biosynthesis protein, putativeSubName: Full=Teichoic acid biosynthesis protein, putative; chromosome CDS207126 1695 + 0.271976
NA SERP2029 amino acid ABC transporter, amino acid-binding proteinSubName: Full=Amino acid ABC transporter, amino acid-binding protein; chromosome CDS2049064 945 - 0.342857
NA SERP1357 O-succinylbenzoic acid synthetase, putativeSubName: Full=O-succinylbenzoic acid synthetase, putative; chromosome CDS1413267 1002 - 0.315369
NA SERP1308 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1357171 792 - 0.354798
NA SERP0298 teichoic acid biosynthesis protein B, putativeSubName: Full=Teichoic acid biosynthesis protein B, putative; chromosome CDS300486 1092 + 0.304029
NA SERP0297 tagG protein, teichoic acid ABC transporter protein, putativeSubName: Full=TagG protein, teichoic acid ABC transporter protein, putative; chromosome CDS299351 813 + 0.321033
NA SERP0100 LysM domain proteinRecName: Full=N-acetylmuramoyl-L-alanine amidase sle1; EC=3.5.1.28; Flags: Precursor; chromosome CDS84899 975 + 0.363077
NA SERP0043 lysozyme domain proteinSubName: Full=Lysozyme domain protein; chromosome CDS39203 810 - 0.32963
NA SERP1612 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1636626 216 - 0.25463
NA SERP2090 phosphinothricin acetyltransferase, putativeSubName: Full=Phosphinothricin acetyltransferase, putative; chromosome CDS2117387 495 + 0.331313
NA SERP1194 N-acetylmuramoyl-L-alanine amidase, family 3RecName: Full=Probable cell wall amidase LytH; EC=3.5.1.-; Flags: Precursor; chromosome CDS1231513 876 - 0.334475
NA SERP1650 prophage, amidase, putativeSubName: Full=Prophage, amidase, putative; chromosome CDS1689084 1392 + 0.349138
NA SERP2138 immunodominant antigen A, putativeRecName: Full=Probable transglycosylase IsaA; EC=3.2.-.-; AltName: Full=Immunodominant staphylococcal antigen A; Flags: Precursor; chromosome CDS2164774 708 - 0.394068
NA SERP1656 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1694543 282 - 0.276596
alr SERP1683 alanine racemaseRecName: Full=Alanine racemase; EC=5.1.1.1; chromosome CDS1726419 1149 - 0.333333
atlE SERP0636 bifunctional autolysinRecName: Full=Bifunctional autolysin; Includes: RecName: Full=N-acetylmuramoyl-L-alanine amidase; EC=3.5.1.28; Includes: RecName: Full=Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; EC=3.2.1.96; Flags: Precursor; chromosome CDS627656 4008 - 0.337325
capA SERP2105 capA proteinSubName: Full=CapA protein; chromosome CDS2129263 1074 - 0.28771
capB SERP2107 capB proteinSubName: Full=CapB protein; chromosome CDS2130814 1158 - 0.356649
dapA SERP0965 dihydrodipicolinate synthaseRecName: Full=4-hydroxy-tetrahydrodipicolinate synthase; Short=HTPA synthase; EC=4.3.3.7; chromosome CDS983825 885 + 0.338983
dgkA SERP1136 diacylglycerol kinaseSubName: Full=Diacylglycerol kinase; EC=2.7.1.107; chromosome CDS1174542 357 - 0.280112
dltB SERP0519 dltB proteinSubName: Full=DltB protein; chromosome CDS504627 1215 + 0.31358
dltD SERP0521 dltD proteinSubName: Full=DltD protein; chromosome CDS506092 1239 + 0.332526
galU SERP2056 UTP-glucose-1-phosphate uridylyltransferaseRecName: Full=UTP--glucose-1-phosphate uridylyltransferase; EC=2.7.7.9; AltName: Full=Alpha-D-glucosyl-1-phosphate uridylyltransferase; AltName: Full=UDP-glucose pyrophosphorylase; Short=UDPGP; AltName: Full=Uridine diphosphoglucose pyrophosphorylase; chromosome CDS2080818 867 - 0.3391
gidB SERP0005 glucose-inhibited division protein BRecName: Full=Ribosomal RNA small subunit methyltransferase G; EC=2.1.1.-; AltName: Full=16S rRNA 7-methylguanosine methyltransferase; Short=16S rRNA m7G methyltransferase; chromosome CDS4658 720 + 0.336111
glmS SERP1760 glucosamine--fructose-6-phosphate aminotransferase, isomerizingRecName: Full=Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; EC=2.6.1.16; AltName: Full=D-fructose-6-phosphate amidotransferase; AltName: Full=GFAT; AltName: Full=Glucosamine-6-phosphate synthase; AltName: Full=Hexosephosphate aminotransferase; AltName: Full=L-glutamine--D-fructose-6-phosphate amidotransferase; chromosome CDS1797037 1806 - 0.339978
glmU SERP0137 UDP-N-acetylglucosamine pyrophosphorylaseRecName: Full=Bifunctional protein GlmU; Includes: RecName: Full=UDP-N-acetylglucosamine pyrophosphorylase; EC=2.7.7.23; AltName: Full=N-acetylglucosamine-1-phosphate uridyltransferase; Includes: RecName: Full=Glucosamine-1-phosphate N-acetyltransferase; EC=2.3.1.157; chromosome CDS126760 1356 + 0.355457
icaA SERP2293 intercellular adhesion protein ARecName: Full=Poly-beta-1,6-N-acetyl-D-glucosamine synthase; Short=PNAG synthase; Short=Poly-beta-1,6-GlcNAc synthase; EC=2.4.1.-; AltName: Full=Biofilm polysaccharide intercellular adhesin synthesis protein IcaA; Short=Biofilm PIA synthesis protein IcaA; AltName: Full=Intercellular adhesion protein A; AltName: Full=N-acetylglucosaminyltransferase IcaA; chromosome CDS2334220 1239 + 0.330105
lgt SERP0429 prolipoprotein diacylglyceryl transferaseRecName: Full=Prolipoprotein diacylglyceryl transferase; EC=2.4.99.-; chromosome CDS433936 840 + 0.354762
lrgB SERP2027 lrgB proteinRecName: Full=Antiholin-like protein LrgB; chromosome CDS2047486 702 + 0.343305
lspA SERP0762 lipoprotein signal peptidaseRecName: Full=Lipoprotein signal peptidase; EC=3.4.23.36; AltName: Full=Prolipoprotein signal peptidase; AltName: Full=Signal peptidase II; Short=SPase II; chromosome CDS760458 486 + 0.298354
mecA SERP2521 penicillin-binding protein 2'SubName: Full=Penicillin-binding protein 2; EC=3.4.16.4; chromosome CDS2576656 2007 + 0.305929
mraW SERP0744 S-adenosyl-methyltransferase MraWRecName: Full=Ribosomal RNA small subunit methyltransferase H; EC=2.1.1.199; AltName: Full=16S rRNA m(4)C1402 methyltransferase; AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase RsmH; chromosome CDS740571 936 + 0.358974
mraY SERP0747 phospho-N-acetylmuramoyl-pentapeptide-transferaseRecName: Full=Phospho-N-acetylmuramoyl-pentapeptide-transferase; EC=2.7.8.13; AltName: Full=UDP-MurNAc-pentapeptide phosphotransferase; chromosome CDS744417 966 + 0.318841
mreC SERP1213 rod shape-determining protein MreCRecName: Full=Cell shape-determining protein MreC; AltName: Full=Cell shape protein MreC; chromosome CDS1249317 840 - 0.320238
mscL SERP0919 large conductance mechanosensitive channel proteinRecName: Full=Large-conductance mechanosensitive channel; chromosome CDS929728 351 - 0.287749
murAA SERP1706 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1RecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase 1; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase 1; Short=EPT 1; chromosome CDS1747152 1266 - 0.35782
murAB SERP1731 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2RecName: Full=UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2; EC=2.5.1.7; AltName: Full=Enoylpyruvate transferase 2; AltName: Full=UDP-N-acetylglucosamine enolpyruvyl transferase 2; Short=EPT 2; chromosome CDS1769457 1260 - 0.361905
murB SERP0405 UDP-N-acetylenolpyruvoylglucosamine reductaseRecName: Full=UDP-N-acetylenolpyruvoylglucosamine reductase; EC=1.3.1.98; AltName: Full=UDP-N-acetylmuramate dehydrogenase; chromosome CDS406238 921 - 0.378936
murC SERP1300 UDP-N-acetylmuramate--alanine ligaseRecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8; AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; chromosome CDS1348071 1314 - 0.322679
murD SERP0748 UDP-N-acetylmuramoylalanine--D-glutamateligaseRecName: Full=UDP-N-acetylmuramoylalanine--D-glutamate ligase; EC=6.3.2.9; AltName: Full=D-glutamic acid-adding enzyme; AltName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; chromosome CDS745384 1350 + 0.331852
murE SERP0607 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligaseRecName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase; EC=6.3.2.7; AltName: Full=L-lysine-adding enzyme; AltName: Full=UDP-MurNAc-L-Ala-D-Glu:L-Lys ligase; AltName: Full=UDP-MurNAc-tripeptide synthetase; AltName: Full=UDP-N-acetylmuramyl-tripeptide synthetase; chromosome CDS600125 1485 + 0.358923
murF SERP1689 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligaseRecName: Full=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; EC=6.3.2.10; chromosome CDS1732587 1356 - 0.314897
murG SERP0993 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferaseRecName: Full=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; EC=2.4.1.227; AltName: Full=Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; chromosome CDS1010596 1074 - 0.309125
murI SERP0733 glutamate racemaseRecName: Full=Glutamate racemase; EC=5.1.1.3; chromosome CDS733577 804 + 0.349502
pbp1 SERP0746 penicillin-binding protein 1SubName: Full=Penicillin-binding protein 1; chromosome CDS741901 2328 + 0.343643
pbp2 SERP1020 penicillin-binding protein 2SubName: Full=Penicillin-binding protein 2; chromosome CDS1063849 2232 + 0.348118
pbp3 SERP1117 penicillin-binding protein 3SubName: Full=Penicillin-binding protein 3; chromosome CDS1155781 2091 - 0.322812
spoVG SERP0136 spoVG proteinRecName: Full=Putative septation protein SpoVG; chromosome CDS125842 309 + 0.375405
srtA SERP2089 sortaseSubName: Full=Sortase; chromosome CDS2116600 612 - 0.313726
tagA SERP0295 UDP-N-acetyl-D-mannosamine transferaseSubName: Full=UDP-N-acetyl-D-mannosamine transferase; chromosome CDS297389 759 + 0.326746
tagD SERP0300 glycerol-3-phosphate cytidylyltransferaseSubName: Full=Glycerol-3-phosphate cytidylyltransferase; EC=2.7.7.15; chromosome CDS302776 399 + 0.340852
tagF SERP1960 teichoic acid biosynthesis protein FSubName: Full=Teichoic acid biosynthesis protein F; chromosome CDS1978254 2166 - 0.297784
ypfP SERP0606 ypfP proteinRecName: Full=Processive diacylglycerol beta-glucosyltransferase; EC=2.4.1.-; AltName: Full=Beta-diglucosyldiacylglycerol synthase; Short=Beta-DGS; Short=DGlcDAG synthase; Short=Glc2-DAG synthase; AltName: Full=Beta-gentiobiosyldiacylglycerol synthase; AltName: Full=Beta-monoglucosyldiacylglycerol synthase; Short=Beta-MGS; Short=MGlcDAG synthase; AltName: Full=Glucosyl-beta-1,6-glucosyldiacylglycerol synthase; AltName: Full=UDP glucosyltransferase; AltName: Full=UDP-glucose:1,2-diacylglycerol-3-beta-D-glucosyltransferase; chromosome CDS598429 1176 - 0.312925