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2024-05-07 11:02:23

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Synechococcus sp. WH 8102, WH8102

Number of genes found: 149

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Synechococcus sp. WH 8102, WH8102
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SYNW1214 putative peptidasechromosome CDS1205298 1041 - 0.545629
NA SYNW1895 conserved hypothetical proteinchromosome CDS1806945 1086 + 0.629834
NA SYNW0645 putative glycosyltransferase family 2 proteinchromosome CDS630732 2415 - 0.451346
NA SYNW1941 hypotheticalchromosome CDS1846017 369 + 0.490515
NA SYNW1882 putative UDP-glucose:tetrahydrobiopterin glucosyltransferasechromosome CDS1797236 1092 - 0.642857
NA SYNW1370 putative glycosyltransferase family 2chromosome CDS1355930 1161 - 0.635659
NA SYNW2436 conserved hypothetical proteinchromosome CDS2341603 1278 + 0.607199
NA SYNW0458 possible glycosyltransferase group Ichromosome CDS462728 1116 + 0.34767
NA SYNW0943 similar to RlpAchromosome CDS904290 465 - 0.664516
NA SYNW0478 possible glycosyltransferasechromosome CDS477752 3669 + 0.650859
NA SYNW0963 conserved hypothetical proteinchromosome CDS956901 1029 - 0.634597
NA SYNW0420 conserved hypothetical proteinchromosome CDS422384 1197 - 0.609023
NA SYNW1539 conserved hypothetical proteinchromosome CDS1482825 687 + 0.660844
NA SYNW2266 Putative sugar-phosphate nucleotidyl transferasechromosome CDS2164514 1194 + 0.569514
NA SYNW0958 similar to leukotoxin secretion proteinchromosome CDS949343 1161 - 0.415159
NA SYNW0453 Possible glycosyltransferasechromosome CDS457909 903 + 0.362126
NA SYNW1653 probable glycosyltransferasechromosome CDS1590195 1230 - 0.643902
NA SYNW1957 possible LysM domainchromosome CDS1863491 999 + 0.612613
NA SYNW0461 Putative nucleotide sugar epimerase/dehydratasechromosome CDS465880 1917 + 0.587898
NA SYNW1350 hypotheticalchromosome CDS1341611 927 - 0.398058
NA SYNW1336 conserved hypothetical proteinchromosome CDS1328386 705 - 0.652482
NA SYNW0088 conserved hypothetical proteinchromosome CDS89360 1653 + 0.587417
NA SYNW0407 Possible glycosyltransferasechromosome CDS403603 1209 - 0.629446
NA SYNW1085 possible ABC transporter componentchromosome CDS1072401 912 + 0.623904
NA SYNW2115 Glycosyl transferase, family 2chromosome CDS1998531 963 + 0.628245
NA SYNW0445 Putative nucleotide sugar epimerasechromosome CDS449194 996 + 0.509036
NA SYNW0663 probable glycosyltransferasechromosome CDS647137 1170 - 0.650427
NA SYNW0198 putative nucleoside-diphosphate sugar epimerasechromosome CDS202930 951 + 0.631966
NA SYNW2471 conserved hypothetical proteinchromosome CDS2375707 864 + 0.650463
NA SYNW0796 small mechanosensitive ion channel, MscS familychromosome CDS773269 1023 - 0.546432
NA SYNW0084 Putative glycosyltransferasechromosome CDS81057 1212 + 0.457096
NA SYNW0183 conserved hypothetical proteinchromosome CDS183394 771 + 0.626459
NA SYNW0174 possible glycosyltransferase family 1chromosome CDS171825 1182 + 0.521997
NA SYNW1094 putative d-alanyl-d-alanine dipeptidasechromosome CDS1081637 729 + 0.633745
NA SYNW0167 putative glycosyl transferase family proteinchromosome CDS164692 984 + 0.60061
NA SYNW0454 Possible glycosyltransferasechromosome CDS458804 885 + 0.354802
NA SYNW1623 possible apolipoprotein n-acyltransferasechromosome CDS1562444 1398 - 0.655222
NA SYNW0460 Putative glycosyltransferase family 4 proteinchromosome CDS464903 981 + 0.503568
NA SYNW0060 putative glycosyltransferasechromosome CDS54999 1323 + 0.631897
NA SYNW0455 Possible glycosyltransferasechromosome CDS459685 777 + 0.343629
NA SYNW0178 Possible glycosyltransferasechromosome CDS177104 948 + 0.558017
NA SYNW0639 possible ABC transporter involved in polysaccharide effluxchromosome CDS622199 822 + 0.46472
NA SYNW2209 Possible glycosyltransferase 2 fused to TPR-repeat domainchromosome CDS2105220 1203 + 0.66251
NA SYNW0398 Putative acylneuraminate cytidylyltransferasechromosome CDS392982 681 - 0.643172
NA SYNW1009 Cell wall hydrolase/autolysinchromosome CDS1007714 1095 + 0.654795
NA SYNW0772 Possible nucleotide sugar epimerasechromosome CDS753872 906 - 0.644592
NA SYNW1360 conserved hypothetical proteinchromosome CDS1349275 1026 - 0.602339
NA SYNW0620 possible ABC transporter involved in polysaccharide effluxchromosome CDS605728 777 - 0.474903
NA SYNW0399 Possible polysaccharide export proteinchromosome CDS393695 1986 + 0.672205
NA SYNW0414 hypotheticalchromosome CDS413405 1263 - 0.65004
NA SYNW2298 conserved hypothetical proteinchromosome CDS2194058 648 - 0.665123
NA SYNW1581 hypotheticalchromosome CDS1523942 411 - 0.532847
NA SYNW0200 Putative nucleotide sugar epimerasechromosome CDS205280 1023 + 0.616813
NA SYNW1175 carboxyl-terminal processing proteasechromosome CDS1166228 1338 + 0.529895
NA SYNW1148 conserved hypothetical proteinchromosome CDS1144099 669 + 0.626308
NA SYNW0284 possible bicarbonate transporter, ICT familychromosome CDS283439 1296 - 0.658951
NA SYNW1701 possible mechanosensitive ion channel, MscS familychromosome CDS1634638 1653 - 0.622505
NA SYNW0419 conserved hypothetical proteinchromosome CDS420702 1686 - 0.597865
NA SYNW0421 UDP-glucose 4-epimerase-like proteinchromosome CDS423659 1038 - 0.626204
NA SYNW0260 putative glycosyltransferasechromosome CDS260146 1140 + 0.634211
NA SYNW0703 possible membrane fusion proteinchromosome CDS688413 1101 - 0.601272
NA SYNW2187 putative RND family outer membrane efflux proteinchromosome CDS2084501 1695 - 0.568142
NA SYNW0172 conserved hypothetical proteinchromosome CDS168890 1044 + 0.632184
NA SYNW0044 conserved hypothetical proteinchromosome CDS41017 210 + 0.504762
NA SYNW0404 conserved hypothetical protein, similar to GumB proteinchromosome CDS400249 1092 + 0.619048
NA SYNW0654 Putative glycosyltransferasechromosome CDS638918 2013 - 0.649776
NA SYNW2114 conserved hypothetical proteinchromosome CDS1997752 729 + 0.648834
NA SYNW0410 possible effux transporterchromosome CDS406890 1263 - 0.60966
NA SYNW0195 Putative glycosyltransferasechromosome CDS197974 1251 + 0.571543
NA SYNW1652 galactosyl-1-phosphate transferasechromosome CDS1589405 759 - 0.625823
NA SYNW0444 Putative acylneuraminate cytidylyltransferasechromosome CDS448496 702 + 0.478632
NA SYNW0229 putative glycine betaine transporter, BCCT familychromosome CDS228184 1548 - 0.643411
NA SYNW0194 possible similar to leukotoxin secretion proteinchromosome CDS196778 1191 + 0.56927
NA SYNW0456 Possible glycosyltransferasechromosome CDS460448 1029 + 0.334305
NA SYNW0853 conserved hypothetical proteinchromosome CDS823011 933 - 0.643087
NA SYNW0446 putative aminotransferase (degT family)chromosome CDS450193 1212 + 0.561056
NA SYNW2294 Possible glycosyltransferasechromosome CDS2189604 1728 - 0.418403
NA SYNW0177 possible glycosyltransferase group 1chromosome CDS174882 2226 + 0.583109
NA SYNW0988 hypotheticalchromosome CDS985630 732 - 0.519126
NA SYNW2157 conserved hypothetical proteinchromosome CDS2050674 1128 - 0.588652
NA SYNW0265 conserved hypothetical proteinchromosome CDS265077 2796 - 0.60515
NA SYNW1098 putative carboxypeptidasechromosome CDS1088059 753 + 0.620186
NA SYNW2297 conserved hypothetical proteinchromosome CDS2193814 252 - 0.59127
NA SYNW1881 conserved hypothetical proteinchromosome CDS1795407 1788 - 0.64038
NA SYNW2503 conserved hypothetical proteinchromosome CDS2408308 1275 - 0.643922
NA SYNW0555 chloroplast outer envelope membrane protein homologchromosome CDS545475 2178 + 0.600092
NA SYNW1496 conserved hypothetical proteinchromosome CDS1450257 1020 + 0.641176
NA SYNW1089 possible glycosyltransferasechromosome CDS1075439 933 + 0.609861
NA SYNW0416 Possible glycosyltransferasechromosome CDS415919 1986 + 0.647533
NA SYNW1571 hypotheticalchromosome CDS1516963 498 - 0.415663
NA SYNW1079 putative lipoprotein signal peptidasechromosome CDS1067789 480 - 0.602083
NA SYNW0459 possible UDP-glucose 4-epimerasechromosome CDS463850 942 + 0.406582
NA SYNW0037 conserved hypothetical proteinchromosome CDS35685 906 - 0.64128
NA SYNW0050 Putative penicillin-binding proteinchromosome CDS46318 1788 + 0.626957
NA SYNW0337 conserved hypothetical proteinchromosome CDS331851 1272 + 0.67217
NA SYNW1049 conserved hypothetical proteinchromosome CDS1041749 423 - 0.617021
NA SYNW1678 putative penicillin binding proteinchromosome CDS1613744 2100 + 0.612857
NA SYNW0640 possible ABC transporter involved in polysaccharide effluxchromosome CDS622992 1245 + 0.514056
NA SYNW0423 putative GDP-L-fucose synthetasechromosome CDS426093 972 + 0.555556
NA SYNW0400 similar to capsule polysaccharide protein kpsSchromosome CDS395701 2028 + 0.649901
NA SYNW0281 possible soluble lytic transglycosylasechromosome CDS278907 2124 - 0.636064
Ugd SYNW0199 UDP-glucose dehydrogenasechromosome CDS203877 1404 + 0.652422
alr SYNW2098 putative alanine racemasechromosome CDS1980851 1131 + 0.644562
ctpA SYNW1968 putative carboxyl-terminal processing proteasechromosome CDS1879585 1278 + 0.610329
dacB, pbp SYNW1250 putative D-Ala-D-Ala carboxypeptidase 3 family (S13)chromosome CDS1244776 1317 - 0.624146
dapA SYNW0067 dihydrodipicolinate synthasechromosome CDS63597 909 + 0.641364
ddlB SYNW1641 D-alanine--D-alanine ligasechromosome CDS1579259 1062 + 0.621469
degT SYNW0220 putative pleiotropic regulatory proteinchromosome CDS220604 1236 - 0.619741
dgkA SYNW2314 possible diacylglycerol kinasechromosome CDS2215462 447 + 0.642058
ftsI SYNW1760 putative peptidoglycan synthetase (pbp transpeptidase domain)chromosome CDS1690072 1800 - 0.611111
galE SYNW0191 UDP-glucose 4-epimerasechromosome CDS191977 1035 - 0.654106
gidB SYNW0626 putative glucose inhibited division protein Bchromosome CDS609928 747 - 0.659973
glmS SYNW0145 Glutamine--fructose-6-phosphate transaminase (isomerizing)chromosome CDS140587 1890 + 0.636508
glmU SYNW1003 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS1000860 1353 - 0.634885
gmd SYNW0422 GDP-D-mannose 4, 6-dehydratasechromosome CDS424933 1164 + 0.60567
kdsA SYNW0180 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase)chromosome CDS179251 852 - 0.605634
kdsB1 SYNW0425 Putative CMP-KDO synthetasechromosome CDS428869 735 + 0.379592
kdsB2 SYNW0184 putative CTP:CMP-3-deoxy-D-manno-octulosonate transferasechromosome CDS184164 780 + 0.651282
lepA SYNW1684 GTP-binding protein LepAchromosome CDS1619854 1821 - 0.592532
lpxA SYNW0558 UDP-N-acetylglucosamine acyltransferasechromosome CDS548952 828 + 0.646135
lpxB SYNW0559 Lipid-A-disaccharide synthetasechromosome CDS549779 1182 + 0.655668
lpxC SYNW0556 UDP-3-0-acyl N-acetylglucosamine deacetylasechromosome CDS547652 828 + 0.663043
lpxD SYNW0783 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferasechromosome CDS763233 1044 + 0.653257
lytB SYNW0252 LytB protein homologchromosome CDS252316 1200 - 0.61
menC SYNW2306 putative O-succinylbenzoate synthasechromosome CDS2209008 972 - 0.676955
mraY SYNW2516 Putativephospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS2419275 1107 + 0.63234
mreC SYNW0123 putative rod shape-determining proteinchromosome CDS121246 747 + 0.641232
murB SYNW0028 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS27775 900 - 0.636667
murC SYNW0029 Probable UDP-N-acetylmuramate-alanine ligasechromosome CDS28674 1404 - 0.62037
murD SYNW0530 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome CDS523287 1389 - 0.645788
murE SYNW1690 UDP-N-acetylmuramyl-tripeptide synthetasechromosome CDS1626144 1503 - 0.658017
murF SYNW1002 Cytoplasmic peptidoglycan synthetases, N-terminal: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate- - D-alanyl-D-alanine ligasechromosome CDS999514 1350 + 0.662963
murG SYNW2333 Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferasechromosome CDS2235396 1077 + 0.654596
murI SYNW1010 Putative Aspartate and glutamate racemases:Glutamate racemasechromosome CDS1008805 789 + 0.631179
neuB, spsE SYNW0448 putative N-acetylneuraminic acid synthetasechromosome CDS452006 1002 + 0.50499
neuC SYNW0449 putative N-acetylglucosamine-6-phosphate 2-epimerase/N-acetylglucosamine-6-phosphatasechromosome CDS453004 1173 + 0.462063
nfrC SYNW1830 UDP-N-acetylglucosamine 2-epimerasechromosome CDS1749850 1119 - 0.633601
psbV SYNW0537 Cytochrome c-550chromosome CDS529796 546 - 0.624542
putative murA SYNW1633 UDP-N-glucosamine 1-carboxyvinyltransferasechromosome CDS1570207 1302 + 0.595238
rfbB SYNW0646 dTDP-glucose-4,6-dehydratasechromosome CDS633110 1068 - 0.574906
rfbC SYNW0648 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS635091 588 - 0.595238
rfbD SYNW0647 putative dTDP-4-dehydrorhamnose reductasechromosome CDS634183 909 - 0.645765
rffM SYNW0242 Glycosyl transferase WecB/TagA/CpsF familychromosome CDS244306 735 + 0.62585
rlpA SYNW2028 possible rare lipoprotein Achromosome CDS1926462 624 - 0.608974
rmlA. rfbA SYNW0649 glucose-1-phosphate thymidylyltransferasechromosome CDS635668 942 - 0.612527
sqdB SYNW0052 sulfolipid (UDP-sulfoquinovose) biosynthesis proteinchromosome CDS49268 1197 - 0.617377
sqdX SYNW0051 SqdXchromosome CDS48109 1146 - 0.642234
ycf39 SYNW0683 putative chaperon-like protein for quinone binding in photosystem IIchromosome CDS667954 963 + 0.607477
yvoC, lgt, umpA SYNW1843 putative prolipoprotein diacylglyceryl transferasechromosome CDS1759425 837 + 0.577061