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2024-05-04 10:00:47

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Bordetella bronchiseptica, RB50

Number of genes found: 238

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Bordetella bronchiseptica, RB50
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BB4238 putative peptidoglycan-associated lipoproteinchromosome CDS4512797 498 + 0.606426
NA BB1561 conserved hypothetical proteinchromosome CDS1665801 717 + 0.705718
NA BB1889 putative outer membrane proteinchromosome CDS2009009 1422 - 0.733474
NA BB4029 putative glycosyl transferasechromosome CDS4280560 936 - 0.662393
NA BB4462 putative outer membrane proteinchromosome CDS4758151 1320 + 0.696212
NA BB3842 outer membrane porin protein precursorchromosome CDS4072632 1167 - 0.61611
NA BB0937 putative exported proteinchromosome CDS1013713 2520 + 0.670238
NA BB4269 putative glycosyl transferasechromosome CDS4545237 1059 - 0.69594
NA BB2614 putative outer membrane proteinchromosome CDS2778018 564 + 0.620567
NA BB2207 phage-related conserved hypothetical proteinchromosome CDS2349158 825 + 0.591515
NA BB0086 putative glycosyl transferaseschromosome CDS84369 1146 + 0.686736
NA BB4396 putative membrane proteinchromosome CDS4683050 900 + 0.725556
NA BB3018 putative peptidasechromosome CDS3222453 879 - 0.688282
NA BB4687 putative mandelate racemasechromosome CDS4984967 1164 + 0.67268
NA BB4566 outer membrane porin protein precursorchromosome CDS4863378 1146 + 0.65096
NA BB3720 conserved hypothetical proteinchromosome CDS3942827 885 + 0.750282
NA BB0435 putative exported proteinchromosome CDS450558 1530 - 0.733987
NA BB2406 putative lipoproteinchromosome CDS2560689 648 - 0.734568
NA BB0219 putative glycosyl transferasechromosome CDS224449 1134 + 0.755732
NA BB2443 conserved hypothetical proteinchromosome CDS2595885 960 - 0.751042
NA BB4351 hypothetical proteinchromosome CDS4633208 1416 + 0.67726
NA BB2683 putative racemasechromosome CDS2846417 1125 + 0.676444
NA BB3110 autotransporterchromosome CDS3315334 2313 - 0.680502
NA BB0881 putative glycosyltransferasechromosome CDS937191 1122 + 0.721925
NA BB2006 3-deoxy-manno-octulosonate cytidylyltransferasechromosome CDS2144578 765 - 0.713726
NA BB0122 DegT/DnrJ/EryC1/StrS aminotransferase family proteinchromosome CDS124395 1161 + 0.660637
NA BB3337 conserved hypothetical proteinchromosome CDS3563327 744 + 0.724462
NA BB2508 putative membrane transport proteinchromosome CDS2661650 1347 + 0.680772
NA BB0197 putative glycosyl transferasechromosome CDS202782 1041 + 0.724304
NA BB4104 putative nucleotidyl transferasechromosome CDS4366689 693 + 0.748918
NA BB0121 NAD dependent epimerase/dehydratase family proteinchromosome CDS123421 978 + 0.587935
NA BB3400 putative transferasechromosome CDS3638258 1104 - 0.709239
NA BB3579 putative peptidoglycan-binding proteinchromosome CDS3801868 1230 - 0.70813
NA BB4102 putative outer membrane (permeability) proteinchromosome CDS4363104 2373 - 0.66456
NA BB0168 putative penicillin-binding protein precursorchromosome CDS177046 1257 + 0.677009
NA BB2245 putative exported proteinchromosome CDS2376231 330 - 0.681818
NA BB0879 putative glycosyltranferasechromosome CDS934086 1137 + 0.729991
NA BB1364 probable D-alanyl-D-alanine carboxypeptidasechromosome CDS1458522 1437 + 0.718859
NA BB3302 lipoproteinchromosome CDS3532263 429 + 0.67366
NA BB2815 putative mandelate racemasechromosome CDS2977149 1179 - 0.700594
NA BB4463 putative cytidylyltransferasechromosome CDS4759491 489 - 0.670757
NA BB3729 putative lipoproteinchromosome CDS3953367 669 + 0.666667
NA BB3398 putative transferasechromosome CDS3636665 753 - 0.675963
NA BB2333 putative C4-dicarboxylate transporterchromosome CDS2485289 1080 + 0.696296
NA BB3349 putative efflux system inner membrane proteinchromosome CDS3578723 1245 - 0.683534
NA BB0070 penicillin-binding protein 1Achromosome CDS63564 2445 - 0.66544
NA BB0890 putative sulfatasechromosome CDS948073 1962 + 0.680428
NA BB3991 putative UTP--glucose-1-phosphate uridylyltransferasechromosome CDS4240394 840 + 0.659524
NA BB4847 putative lipoproteinchromosome CDS5163230 816 + 0.693627
NA BB4842 putative outer membrane proteinchromosome CDS5159159 639 + 0.680751
NA BB3347 putative efflux system outer membrane componentchromosome CDS3573930 1500 - 0.698667
NA BB2233 phage-related conserved hypothetical proteinchromosome CDS2366775 390 + 0.553846
NA BB0899 putative outer membrane lipoproteinchromosome CDS959721 600 + 0.743333
NA BB4236 Proline-rich inner membrane proteinchromosome CDS4510293 1140 + 0.683333
NA BB0882 putative glycosyltransferasechromosome CDS938309 1155 + 0.743723
NA BB4429 putative outer membrane efflux proteinchromosome CDS4715397 1503 - 0.735862
NA BB2379 probable outer membrane efflux proteinchromosome CDS2533447 1488 - 0.756048
NA BB4490 outer membrane porinchromosome CDS4789229 1107 - 0.642276
NA BB2459 putative mandelate racemase/muconate lactonizing enzymechromosome CDS2614195 1149 + 0.747607
NA BB3084 probable outer membrane efflux proteinchromosome CDS3287714 1422 + 0.748242
NA BB0877 UDP-N-acetylglucosamine C4 epimerasechromosome CDS931688 1026 + 0.679337
NA BB3397 putative transferasechromosome CDS3635556 1113 - 0.707098
NA BB2830 putative autotransporterchromosome CDS2995452 2550 - 0.723137
NA BB0437 HlyD family secretion proteinchromosome CDS455286 1182 - 0.720812
NA BB3262 putative membrane proteinchromosome CDS3491173 1737 + 0.70639
NA BB4720 putative dihydrodipicolinate synthasechromosome CDS5021486 948 + 0.704641
NA BB4561 outer membrane lipoproteinchromosome CDS4858392 519 + 0.680154
NA BB1398 putative peptidasechromosome CDS1494651 861 + 0.721254
NA BB1188 HlyD-family secretion proteinchromosome CDS1279945 1443 - 0.676369
NA BB3394 putative transferasechromosome CDS3631742 1122 - 0.726381
NA BB4801 thymidine diphosphoglucose 4,6-dehydratasechromosome CDS5108389 981 + 0.705403
NA BB0206 putative transglycosylasechromosome CDS211232 2127 + 0.699107
NA BB3922 putative exported proteinchromosome CDS4169655 1251 - 0.659472
NA BB1859 Putative membrane proteinchromosome CDS1964271 2421 - 0.694754
NA BB1554 Putative UDP-N-acetylglucosamine 1-carboxyvinyltransferasechromosome CDS1659328 1302 + 0.680492
NA BB3854 outer membrane component of multidrug efflux systemchromosome CDS4086459 1464 + 0.734973
NA BB0350 putative mechanosensitive channel proteinchromosome CDS363350 894 - 0.676734
NA BB2008 putative tetraacyldisaccharide 4'-kinasechromosome CDS2145596 1044 - 0.755747
NA BB1065 putative NAD dependent epimerase/dehydratasechromosome CDS1146874 1008 + 0.735119
NA BB2932 putative glycosyl transferasechromosome CDS3112111 1314 + 0.648402
NA BB1203 conserved hypothetical proteinchromosome CDS1295706 885 - 0.693785
NA BB4107 putative outer membrane proteinchromosome CDS4368612 648 - 0.689815
NA BB2270 autotransporterchromosome CDS2399520 1680 + 0.67381
NA BB4190 putative peptidase family M23/M37 proteinchromosome CDS4454256 987 - 0.70922
NA BB3923 hypothetical proteinchromosome CDS4171055 981 - 0.696228
NA BB3378 putative lipoproteinchromosome CDS3609832 660 + 0.680303
NA BB2967 putative exported proteinchromosome CDS3155225 600 + 0.723333
NA BB3487 phage-related conserved hypothetical proteinchromosome CDS3732602 390 - 0.553846
NA BB0193 putative acyltransferasechromosome CDS199144 891 - 0.702581
NA BB0843 putative exported proteinchromosome CDS887902 1905 + 0.71706
NA BB1725 putative membrane proteinchromosome CDS1812960 834 + 0.681055
NA BB4551 outer membrane porin protein precursorchromosome CDS4848441 1065 - 0.639437
NA BB0124 putative UDP-glucose 4-epimerasechromosome CDS127586 924 + 0.611472
NA BB4814 putative glycosyl transferaseschromosome CDS5126528 1062 - 0.693974
NA BB3700 conserved hypothetical proteinchromosome CDS3920355 756 - 0.693122
NA BB0767 hypothetical protein Xcc2124chromosome CDS799336 1089 + 0.721763
NA BB0102 putative dihydrodipicolinate synthasechromosome CDS100787 900 + 0.712222
NA BB1657 putative lipoproteinchromosome CDS1759372 1128 + 0.670213
NA BB4004 conserved hypothetical proteinchromosome CDS4252965 912 - 0.716009
NA BB3070 probable dihydrodipicolinate synthasechromosome CDS3276265 945 - 0.688889
NA BB3638 putative lytic murein transglycosylase precursorchromosome CDS3857888 636 - 0.658805
NA BB2613 probable surface antigenchromosome CDS2775556 2337 + 0.647411
NA BB3959 conserved hypothetical proteinchromosome CDS4207881 906 + 0.706402
NA BB2383 putative HlyD-family secretion proteinchromosome CDS2538970 1014 - 0.734714
NA BB3930 conserved hypothetical proteinchromosome CDS4177143 555 - 0.702703
NA BB4622 putative membrane-bound transglycolasechromosome CDS4922421 1290 - 0.727132
NA BB1373 putative transglycosylasechromosome CDS1469454 831 + 0.670277
NA BB3181 putative outer membrane (scaffolding) proteinchromosome CDS3396209 756 - 0.702381
NA BB3512 phage-related conserved hypothetical proteinchromosome CDS3749646 825 - 0.591515
NA BB0194 putative acyltransferasechromosome CDS200031 867 - 0.711649
NA BB1191 putative outer membrane proteinchromosome CDS1283768 1470 - 0.667347
NA BB2612 putative membrane proteinchromosome CDS2774169 1335 + 0.704869
NA BB2904 putative aspartate racemasechromosome CDS3073422 744 + 0.701613
NA BB3369 putative cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS3598989 1266 - 0.680885
NA BB1297 putative lipoproteinchromosome CDS1389131 675 + 0.714074
NA BB3406 putative phospholipasechromosome CDS3649842 1884 + 0.747877
NA BB0883 putative glycosyltransferasechromosome CDS939460 1131 + 0.737401
NA BB3770 choloylglycine hydrolasechromosome CDS3993252 945 - 0.621164
NA BB4152 exported protein, conservedchromosome CDS4411969 2109 - 0.700806
NA BB3111 autotransporterchromosome CDS3317747 1587 - 0.713296
NA BB0422 putative acetyltransferasechromosome CDS436991 549 - 0.724954
NA BB3852 probable HlyD-family secretion proteinchromosome CDS4082230 1107 + 0.726287
NA BB4436 hypothetical proteinchromosome CDS4727056 744 + 0.705645
NA BB1995 conserved hypothetical proteinchromosome CDS2133092 918 + 0.690632
NA BB3910 putative exported proteinchromosome CDS4153418 633 - 0.706161
NA BB1562 putative phospholipasechromosome CDS1666533 1302 - 0.69278
NA BB4432 HlyD family secretion proteinchromosome CDS4723098 1251 - 0.709033
NA BB2941 putative autotransporterchromosome CDS3124807 2814 - 0.712864
NA BB4550 putative aspartate/glutamate racemasechromosome CDS4847649 735 + 0.702041
NA BB4512 putative lipoproteinchromosome CDS4810278 951 + 0.711882
NA BB4268 putative membrane proteinchromosome CDS4543621 1620 - 0.706173
NA BB4277 putative HlyD-like secretion proteinchromosome CDS4555800 1080 - 0.726852
NA BB0875 probable glycosyltransferasechromosome CDS929193 1104 + 0.683877
NA BB4281 putative membrane-bound lytic murein transglycosylase D precursorchromosome CDS4559178 1410 + 0.679433
NA BB1848 putative lipoproteinchromosome CDS1955189 603 - 0.660033
acrA BB2527 acriflavine resistance protein a precursorchromosome CDS2681936 1191 + 0.701931
alr BB1644 alanine racemase, catabolicchromosome CDS1746696 1164 - 0.698454
amiC BB4056 N-acetylmuramoyl-L-alanine amidasechromosome CDS4313579 1245 + 0.692369
bapA BB1649 autotransporterchromosome CDS1751345 2712 + 0.665192
bapB BB3292 autotransporterchromosome CDS3521978 1842 - 0.712812
bapC BB2033 putative autotransporterchromosome CDS2179242 2982 + 0.652247
betT BB3874 high-affinity choline transport proteinchromosome CDS4111596 2232 - 0.671147
betT BB3850 high-affinity choline transport proteinchromosome CDS4079275 1959 - 0.653395
bplC BB0153 lipopolysaccharide biosynthesis proteinchromosome CDS164599 1101 - 0.662125
bplD BB0152 UDP-N-acetylglucosamine 2-epimerasechromosome CDS163503 987 - 0.693009
bplE BB0151 probable glycosyl transferasechromosome CDS162220 1260 - 0.680952
bplF BB0150 lipopolysaccharide biosynthesis proteinchromosome CDS160970 1233 - 0.674777
bplG BB0149 probable sugar transferasechromosome CDS160380 594 - 0.60101
bplH BB0148 putative glycosyl transferasechromosome CDS159012 1107 - 0.666667
bplL BB0145 lipopolysaccharide biosynthesis proteinchromosome CDS155091 1875 - 0.650133
bscF BB1609 putative type III secretion proteinchromosome CDS1715899 267 - 0.617977
bscO BB1629 putative type III secretion proteinchromosome CDS1730779 510 + 0.676471
cphA BB3585 cyanphycin synthetasechromosome CDS3811006 2574 + 0.700466
cphA BB3584 cyanophycin synthetasechromosome CDS3808296 2640 + 0.698485
ctpA BB0300 putative carboxy-terminal processing protease precursorchromosome CDS302579 1452 + 0.663223
cusC BB2529 probable outer membrane lipoproteinchromosome CDS2686315 1467 + 0.724608
cyaD BB0326 cyclolysin secretion proteinchromosome CDS338833 1323 + 0.693122
cyaE BB0327 cyclolysin secretion proteinchromosome CDS340157 1425 + 0.738947
dadX BB3271 alanine racemase, catabolicchromosome CDS3501029 1128 - 0.700355
dapA BB0686 dihydrodipicolinate synthasechromosome CDS721788 891 + 0.712682
dapA BB1656 dihydrodipicolinate synthasechromosome CDS1758455 906 + 0.665563
dapA BB1108 putative dihydrodipicolinate synthasechromosome CDS1192972 906 + 0.700883
ddlB BB4196 D-alanine--D-alanine ligase Bchromosome CDS4460480 951 - 0.685594
dgkA BB0959 putative diacylglycerol kinasechromosome CDS1034576 399 - 0.659148
dltB BB4381 putative protein involved in the transfer of D-alanine into teichoic acidschromosome CDS4669366 1128 - 0.661348
dltD BB4383 putative protein involved in the transfer of D-alanine into teichoic acidschromosome CDS4670623 1128 - 0.676418
flgJ BB2567 peptidoglycan hydrolasechromosome CDS2728790 1020 + 0.706863
ftsI BB4203 peptidoglycan synthetase precursorchromosome CDS4470612 1701 - 0.679012
ftsQ BB4195 putative cell division proteinchromosome CDS4459646 822 - 0.681265
gidB BB0002 glucose inhibited division protein Bchromosome CDS1917 633 + 0.652449
glmS BB4802 glucosamine--fructose-6-phosphate aminotransferase [isomerizing]chromosome CDS5109569 1833 - 0.675396
glmU BB4817 UDP-N-acetylglucosamine synthesis bifunctional proteinchromosome CDS5130402 1374 - 0.696507
hmsR BB1767 putative glycosyl transferase component of hemin storage systemchromosome CDS1852536 1260 - 0.644444
kdsA BB3705 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS3924970 858 - 0.648019
kdtA BB0157 3-deoxy-D-manno-octulosonic-acid transferasechromosome CDS168474 1293 + 0.744006
kpsM BB2931 putative polysialic acid transport proteinchromosome CDS3111016 771 - 0.649805
kpsT BB2930 polysialic acid transport ATP-binding proteinchromosome CDS3110282 738 - 0.654472
lepA BB3748 GTP-binding proteinchromosome CDS3971204 1794 - 0.628205
lgt BB4217 prolipoprotein diacylglyceryl transferasechromosome CDS4491892 789 + 0.629911
lnt BB1353 putative apolipoprotein N-acyltransferasechromosome CDS1446108 1644 - 0.737226
lolC BB2298 lipoprotein releasing system transmembrane proteinchromosome CDS2428187 1233 + 0.686131
lpxA BB2617 acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferasechromosome CDS2780209 795 + 0.675472
lpxB BB2618 lipid-A-disaccharide synthasechromosome CDS2781000 1182 + 0.70643
lpxC BB4192 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylasechromosome CDS4455890 924 - 0.645022
lpxD BB2615 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferasechromosome CDS2778590 1092 + 0.704212
lspA BB2171 lipoprotein signal peptidasechromosome CDS2316595 507 - 0.680473
lytB BB3256 putative drug tolerance proteinchromosome CDS3486841 981 - 0.702345
mltB BB3459 membrane-bound lytic murein transglycosylase B precursorchromosome CDS3702915 1146 + 0.697208
mpl BB4393 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligasechromosome CDS4679083 1371 + 0.714077
mraW BB4205 S-adenosyl-methyltransferasechromosome CDS4472617 1095 - 0.685845
mrcA BB3097 penicillin-binding protein 1Achromosome CDS3303288 2613 + 0.701493
mrdA BB4526 penicillin-binding protein 2chromosome CDS4822573 1953 - 0.686636
mreC BB4528 rod shape-determining proteinchromosome CDS4825089 885 - 0.698305
mreD BB4527 rod shape-determining proteinchromosome CDS4824539 564 - 0.693262
mscL BB4869 large-conductance mechanosensitive channelchromosome CDS5179080 459 - 0.599129
mtgA BB4398 monofunctional biosynthetic peptidoglycan transglycosylasechromosome CDS4684830 729 + 0.659808
murA BB4852 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS5166682 1269 + 0.710008
murB BB3945 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS4192888 1062 - 0.714689
murC BB4197 UDP-N-acetylmuramate--alanine ligasechromosome CDS4461427 1407 - 0.703625
murD BB4200 putative peptidoglycan synthesis proteinchromosome CDS4465090 1533 - 0.705806
murE BB4202 Possible murein precusor biosynthesis bifunctional proteinchromosome CDS4467778 2838 - 0.705074
murG BB4198 UDP-N-acetylglucosamine--N-acetylmuramyl-chromosome CDS4462830 1074 - 0.738361
murX BB4201 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS4466619 1134 - 0.652557
ompA BB3474 outer membrane protein A precursorchromosome CDS3719946 582 + 0.606529
ompQ BB3993 outer membrane porin protein OmpQchromosome CDS4242218 1095 - 0.675799
pbp BB2019 penicillin-binding proteinchromosome CDS2159670 2169 + 0.715076
pbpG BB1433 probable D-alanyl-D-alanine carboxypeptidasechromosome CDS1524521 780 - 0.660256
pcp BB4385 putative lipoproteinchromosome CDS4672337 504 - 0.710317
phg BB2246 autotransporterchromosome CDS2376943 1248 + 0.692308
prn BB1366 pertactin precursorchromosome CDS1461346 2751 + 0.716103
rfaC BB0156 probable heptosyltransferasechromosome CDS167510 963 + 0.697819
rfaD BB3462 ADP-L-glycero-D-manno-heptose-6-epimerasechromosome CDS3705728 990 - 0.652525
rfaE BB3463 ADP-heptose synthasechromosome CDS3706714 942 - 0.703822
rfbB BB0175 dTDP-glucose 4,6-dehydratasechromosome CDS182847 1062 - 0.684557
rfbC BB0173 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS181348 549 - 0.675774
rfbD BB0174 dTDP-4-dehydrorhamnose reductasechromosome CDS181954 897 - 0.722408
rkpK BB4815 putative UDP-glucose 6-dehydrogenasechromosome CDS5127586 1323 - 0.685563
tonB BB1980 siderophore-mediated iron transport proteinchromosome CDS2118348 807 + 0.687732
virB5 BB0491 plasmid-related exported proteinchromosome CDS520863 726 - 0.571625
waaF BB3391 heptosyltransferase IIchromosome CDS3629598 966 + 0.732919
wbmA BB0144 putative glycosyl transferasechromosome CDS153856 1218 + 0.646141
wbmB BB0143 hypothetical proteinchromosome CDS152766 1101 + 0.606721
wbmF BB0139 nucleotide sugar epimerase/dehydratasechromosome CDS146983 1074 + 0.595903
wbmG BB0138 nucleotide sugar epimerase/dehydratasechromosome CDS146046 933 + 0.62701
wbmH BB0137 nucleotide sugar epimerase/dehydratasechromosome CDS145100 942 + 0.611465
wbmJ BB0135 hypothetical proteinchromosome CDS140424 2637 + 0.598028
wbmL BB0133 ABC transporter integral membrane proteinchromosome CDS136980 792 + 0.542929
wbmM BB0132 ABC transporter ATP-binding proteinchromosome CDS135765 1209 + 0.595533
wbmN BB0131 ABC transporter ATP-binding proteinchromosome CDS134603 1170 + 0.582051
wbmO BB0130 hypothetical proteinchromosome CDS133281 1326 + 0.496983
wbpO BB0876 polysaccharide biosynthesis proteinchromosome CDS930303 1374 + 0.65575
wbpO BB2925 capsular polysaccharide biosynthesis proteinchromosome CDS3103662 1290 - 0.65969
wbpP BB2924 capsular polysaccharide biosynthesis proteinchromosome CDS3102623 1026 - 0.680312
wcbA BB2923 capsular polysaccharide export proteinchromosome CDS3100569 2058 - 0.718659
wcbD BB2929 capsule polysaccharide export inner-membrane proteinchromosome CDS3109071 1170 - 0.664103
wcbO BB2922 capsular polysaccharide export proteinchromosome CDS3099335 1221 - 0.725635
wcbQ BB2920 putative capsular polysaccharide biosynthesis proteinchromosome CDS3097016 1557 - 0.733462
wza BB2926 putative capsular polysaccharide export proteinchromosome CDS3104974 1098 - 0.664845