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2024-04-29 02:28:41

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Bordetella pertussis, Tohama I

Number of genes found: 179

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bordetella pertussis, Tohama I
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BP3760 putative lipoproteinchromosome CDS3972822 792 + 0.694444
NA BP2472 putative exported proteinchromosome CDS2615538 633 - 0.701422
NA BP2701 putative membrane transport proteinchromosome CDS2866079 1347 - 0.681515
NA BP1017 putative peptidasechromosome CDS1061781 861 + 0.713124
NA BP2487 hypothetical proteinchromosome CDS2635267 1002 - 0.691617
NA BP3602 putative cytidylyltransferasechromosome CDS3818407 489 - 0.670757
NA BP3143 putative glycosyltransferasechromosome CDS3351291 1131 - 0.734748
NA BP1620 putative glycosyl transferasechromosome CDS1704537 786 - 0.650127
NA BP3403 putative UTP--glucose-1-phosphate uridylyltransferasechromosome CDS3611032 909 + 0.645765
NA BP3342 putative peptidoglycan-associated lipoproteinchromosome CDS3565233 498 - 0.606426
NA BP1051 probable D-alanyl-D-alanine carboxypeptidasechromosome CDS1094238 1437 + 0.714683
NA BP3238 putative glycosyl transferasechromosome CDS3450795 936 - 0.663462
NA BP2956 hypothetical proteinchromosome CDS3144038 1416 + 0.679379
NA BP3136 putative sulfatasechromosome CDS3341844 1962 - 0.678899
NA BP3151 probable glycosyltransferasechromosome CDS3361585 1104 - 0.684783
NA BP2383 conserved hypothetical proteinchromosome CDS2521190 756 - 0.689153
NA BP0398 putative membrane proteinchromosome CDS396388 1620 - 0.70679
NA BP3145 putative glycosyltransferasechromosome CDS3353569 1122 - 0.71836
NA BP0878 putative phospholipasechromosome CDS913306 1302 - 0.690476
NA BP3329 putative outer membrane (permeability) proteinchromosome CDS3548641 2373 + 0.664138
NA BP1721 putative peptidasechromosome CDS1805423 885 + 0.691525
NA BP2337 putative phospholipasechromosome CDS2475626 1881 + 0.750133
NA BP2019 putative lipoproteinchromosome CDS2133179 549 - 0.64663
NA BP1161 putative racemasechromosome CDS1225751 1125 - 0.677333
NA BP2413 putative lipoproteinchromosome CDS2555224 660 + 0.669697
NA BP0399 putative glycosyl transferasechromosome CDS398004 1059 - 0.697828
NA BP2043 putative lipoproteinchromosome CDS2160852 660 - 0.677273
NA BP1359 putative mandelate racemasechromosome CDS1434685 1179 + 0.699746
NA BP3073 putative acyltransferasechromosome CDS3275085 891 + 0.695847
NA BP3671 putative glycosyl transferaseschromosome CDS3880344 1146 + 0.686736
NA BP1189 lipoproteinchromosome CDS1252291 429 - 0.675991
NA BP2919 putative lipoproteinchromosome CDS3107307 744 - 0.724462
NA BP3815 HlyD family secretion proteinchromosome CDS4023533 1251 - 0.709033
NA BP2404 conserved hypothetical proteinchromosome CDS2544691 885 + 0.744633
NA BP1569 putative lipoproteinchromosome CDS1648305 1128 - 0.670213
NA BP3268 putative membrane-bound transglycolasechromosome CDS3485197 1290 + 0.728682
NA BP2766 putative tetraacyldisaccharide 4'-kinasechromosome CDS2942986 1044 + 0.754789
NA BP1746 putative peptidoglycan-binding proteinchromosome CDS1831356 1230 + 0.706504
NA BP1231 putative membrane proteinchromosome CDS1294201 1737 - 0.708693
NA BP0785 putative mechanosensitive channel proteinchromosome CDS808046 936 - 0.673077
NA BP3812 putative outer membrane efflux proteinchromosome CDS4015874 1485 - 0.736027
NA BP0183 putative exported proteinchromosome CDS182425 1905 + 0.714961
NA BP0665 thymidine diphosphoglucose 4,6-dehydratasechromosome CDS674991 981 + 0.705403
NA BP3015 putative peptidase family M23/M37 proteinchromosome CDS3206945 930 - 0.708602
NA BP3072 putative acyltransferasechromosome CDS3274234 855 + 0.712281
NA BP3127 putative outer membrane lipoproteinchromosome CDS3331543 600 - 0.743333
NA BP2654 probable dihydrodipicolinate synthasechromosome CDS2811912 945 - 0.688889
NA BP0053 putative aspartate/glutamate racemasechromosome CDS53623 735 - 0.704762
NA BP3727 putative glycosyl transferaseschromosome CDS3936138 1062 - 0.693974
NA BP1061 putative transglycosylasechromosome CDS1106179 831 + 0.66426
NA BP2839 exported protein, conservedchromosome CDS3014951 2109 + 0.698909
NA BP1426 putative membrane proteinchromosome CDS1500455 1335 + 0.701873
NA BP2328 putative transferasechromosome CDS2461341 1113 - 0.707098
NA BP3060 putative transglycosylasechromosome CDS3260719 2064 - 0.704942
NA BP3687 putative dihydrodipicolinate synthasechromosome CDS3896532 834 + 0.715827
NA BP0877 conserved hypothetical proteinchromosome CDS912575 717 + 0.705718
NA BP3467 putative exported proteinchromosome CDS3679672 2520 + 0.669841
NA BP3069 putative glycosyl transferasechromosome CDS3271305 1041 - 0.722382
NA BP3149 UDP-N-acetylglucosamine C4 epimerasechromosome CDS3359168 1026 - 0.675439
NA BP3546 conserved hypothetical proteinchromosome CDS3757641 918 + 0.688453
NA BP2331 putative transferasechromosome CDS2464043 1104 - 0.709239
NA BP1344 autotransporterchromosome CDS1414969 2601 + 0.725106
NA BP2204 putative outer membrane (scaffolding) proteinchromosome CDS2327393 762 - 0.698163
NA BP2851 outer membrane porin protein precursorchromosome CDS3027685 1110 + 0.654955
NA BP2486 putative exported proteinchromosome CDS2633876 1242 - 0.654589
NA BP0828 probable HlyD-family secretion proteinchromosome CDS858107 1107 - 0.725384
NA BP2329 putative transferasechromosome CDS2462450 753 - 0.675963
NA BP0644 putative dihydrodipicolinate synthasechromosome CDS651208 948 + 0.704641
NA BP2075 putative efflux system inner membrane proteinchromosome CDS2193464 1347 + 0.682257
NA BP0474 choloylglycine hydrolasechromosome CDS484213 1068 + 0.627341
NA BP3344 Proline-rich inner membrane proteinchromosome CDS3567095 975 - 0.693333
NA BP2768 3-deoxy-manno-octulosonate cytidylyltransferasechromosome CDS2944283 765 + 0.70719
NA BP3655 penicillin-binding protein 1Achromosome CDS3859722 2445 - 0.665849
NA BP1898 putative membrane proteinchromosome CDS2000734 834 + 0.679856
NA BP3419 conserved hypothetical proteinchromosome CDS3626837 912 - 0.714912
NA BP2495 conserved hypothetical proteinchromosome CDS2642395 543 - 0.697974
NA BP0102 putative penicillin-binding protein precursorchromosome CDS100530 1257 + 0.677804
NA BP3755 putative outer membrane proteinchromosome CDS3968727 639 + 0.679186
NA BP3819 hypothetical proteinchromosome CDS4027491 744 + 0.706989
NA BP3214 putative membrane-bound lytic murein transglycosylase D precursor; putative membrane-bound precursor proteinchromosome CDS3425413 1410 + 0.678014
NA BP0213 putative acetyltransferasechromosome CDS218690 549 + 0.723133
NA BP1582 putative exported proteinchromosome CDS1660549 600 - 0.725
NA BP3327 putative nucleotidyl transferasechromosome CDS3546736 693 - 0.746032
NA BP0840 outer membrane porin protein precursorchromosome CDS869226 1158 + 0.615717
NA BP1427 probable surface antigenchromosome CDS1501842 2337 + 0.645272
NA BP2325 putative transferasechromosome CDS2457529 1122 - 0.726381
NA BP3147 putative glycosyltranferasechromosome CDS3356659 1137 - 0.728232
NA BP0826 outer membrane component of multidrug efflux systemchromosome CDS853491 1494 - 0.733601
NA BP0689 putative lipoproteinchromosome CDS705279 951 - 0.712934
NA BP3363 phage-related conserved hypothetical proteinchromosome CDS3581574 390 - 0.602564
NA BP3144 putative glycosyltransferasechromosome CDS3352418 1155 - 0.744589
NA BP3003 putative membrane proteinchromosome CDS3194692 900 + 0.725556
NA BP1428 putative outer membrane proteinchromosome CDS1504304 564 + 0.620567
alr BP2228 alanine racemase, catabolicchromosome CDS2353764 1164 + 0.700172
amiC BP0246 N-acetylmuramoyl-L-alanine amidasechromosome CDS254539 1245 - 0.692369
bapA BP2224 putative autotransporterchromosome CDS2347938 2712 - 0.671091
bapC BP2738 autotransporter (pseudogene)chromosome CDS2905291 2987 - 0.65149
betT BP0831 high-affinity choline transport proteinchromosome CDS861259 1959 + 0.652884
betT BP0804 high-affinity choline transport proteinchromosome CDS826320 2232 + 0.668011
bplC BP0091 lipopolysaccharide biosynthesis proteinchromosome CDS89111 1101 - 0.662125
bplD BP0090 UDP-N-acetylglucosamine 2-epimerasechromosome CDS88015 1089 - 0.685032
bplE BP0089 probable glycosyl transferasechromosome CDS86732 1260 - 0.680159
bplF BP0088 lipopolysaccharide biosynthesis proteinchromosome CDS85482 1233 - 0.673966
bplG BP0087 probable sugar transferasechromosome CDS84892 594 - 0.60101
bplH BP0086 putative glycosyl transferasechromosome CDS83524 1173 - 0.664109
bplL BP0082 lipopolysaccharide biosynthesis proteinchromosome CDS79601 1875 - 0.650667
bscF BP2264 putative type III secretion proteinchromosome CDS2385424 267 + 0.625468
bscO BP2244 putative type III secretion proteinchromosome CDS2370323 510 - 0.668627
cphA BP1739 cyanphycin synthetasechromosome CDS1820967 2574 - 0.702797
cphA BP1740 cyanophycin synthetasechromosome CDS1823611 2574 - 0.697358
ctpA BP0609 putative carboxy-terminal processing protease precursorchromosome CDS613869 1446 + 0.665284
cusC BP0986 probable outer membrane lipoproteinchromosome CDS1025638 1383 + 0.723789
cyaD BP0762 cyclolysin secretion proteinchromosome CDS783561 1323 + 0.694633
cyaE BP0763 cyclolysin secretion proteinchromosome CDS784885 1425 + 0.736842
dadX BP1221 alanine racemase, catabolicchromosome CDS1283930 1128 + 0.695922
dapA BP1570 dihydrodipicolinate synthasechromosome CDS1649444 879 - 0.663254
ddlB BP3021 D-alanine--D-alanine ligase Bchromosome CDS3213169 951 - 0.690852
dgkA BP3492 putative diacylglycerol kinasechromosome CDS3701378 399 - 0.656642
dltB BP2988 putative protein involved in the transfer of D-alanine into teichoic acidschromosome CDS3181064 1128 - 0.658688
dltD BP2990 putative protein involved in the transfer of D-alanine into teichoic acidschromosome CDS3182321 1128 - 0.674645
flgJ BP1381 peptidoglycan hydrolasechromosome CDS1455791 1023 + 0.7087
ftsI BP3028 peptidoglycan synthetase precursorchromosome CDS3223301 1731 - 0.673599
ftsQ BP3020 putative cell division protein FtsQchromosome CDS3212335 822 - 0.680049
gidB BP0002 glucose inhibited division protein Bchromosome CDS1917 693 + 0.662338
glmS BP0666 glucosamine--fructose-6-phosphate aminotransferase [isomerizing]chromosome CDS676169 1833 - 0.673213
glmU BP3730 UDP-N-acetylglucosamine synthesis bifunctional proteinchromosome CDS3940012 1374 - 0.69869
hmsR BP1942 putative glycosyl transferasechromosome CDS2042603 1260 - 0.646825
kdsA BP2388 2-dehydro-3-deoxyphosphooctonate aldolasechromosome CDS2525801 858 - 0.649184
kdtA BP0095 3-deoxy-D-manno-octulosonic-acid transferasechromosome CDS92986 1287 + 0.742036
kpsE BP1625 capsule polysaccharide export inner-membrane proteinchromosome CDS1707736 1170 + 0.662393
kpsM BP1623 putative polysialic acid transport proteinchromosome CDS1706178 771 + 0.647211
kpsT BP1624 polysialic acid transport ATP-binding proteinchromosome CDS1706948 747 + 0.661312
lepA BP2433 GTP-binding proteinchromosome CDS2575127 1794 - 0.628205
lgt BP3044 prolipoprotein diacylglyceryl transferasechromosome CDS3244148 789 + 0.632446
lolC BP1107 lipoprotein releasing system transmembrane proteinchromosome CDS1157601 1233 + 0.682887
lpxA BP1431 acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferasechromosome CDS1506495 795 + 0.675472
lpxB BP1432 lipid-A-disaccharide synthasechromosome CDS1507286 1182 + 0.70643
lpxC BP3017 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylasechromosome CDS3208579 924 - 0.645022
lpxD BP1429 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferasechromosome CDS1504876 1092 + 0.701465
lspA BP1752 lipoprotein signal peptidasechromosome CDS1837100 507 - 0.684418
lytB BP1237 putative drug tolerance proteinchromosome CDS1299292 978 + 0.699386
mltB BP0959 membrane-bound lytic murein transglycosylase B precursorchromosome CDS997250 1146 - 0.696335
mpl BP3000 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligasechromosome CDS3190725 1371 + 0.712619
mraW BP3030 S-adenosyl-methyltransferasechromosome CDS3225306 1095 - 0.684932
mrcA BP0905 penicillin-binding protein 1Achromosome CDS940147 2613 - 0.700727
mrdA BP0377 penicillin-binding protein 2chromosome CDS377735 1953 + 0.686636
mreC BP0375 rod shape-determining proteinchromosome CDS376287 885 + 0.693785
mreD BP0376 rod shape-determining proteinchromosome CDS377257 465 + 0.694624
mscL BP0278 large-conductance mechanosensitive channelchromosome CDS283686 459 + 0.59695
mtgA BP0326 monofunctional biosynthetic peptidoglycan transglycosylasechromosome CDS329692 672 - 0.657738
murA BP3766 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS3976252 1269 + 0.70922
murB BP2510 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS2658164 1056 - 0.714015
murC BP3022 UDP-N-acetylmuramate--alanine ligasechromosome CDS3214116 1407 - 0.701493
murD BP3025 putative peptidoglycan synthesis proteinchromosome CDS3217779 1533 - 0.705806
murE BP3027 Possible murein precusor biosynthesis bifunctional proteinchromosome CDS3220467 2838 - 0.704369
murG BP3023 UDP-N-acetylglucosamine--N-acetylmuramyl-chromosome CDS3215519 1074 - 0.735568
murX BP3026 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS3219308 1134 - 0.650794
ompA BP0943 outer membrane protein A precursorchromosome CDS979731 582 - 0.603093
ompQ BP3405 outer membrane porin protein OmpQchromosome CDS3612925 1095 - 0.674886
pbp BP2754 penicillin-binding proteinchromosome CDS2926739 2169 - 0.713693
pbpG BP1545 probable D-alanyl-D-alanine carboxypeptidasechromosome CDS1617349 780 - 0.661538
pcp BP2992 putative lipoproteinchromosome CDS3183994 504 - 0.708333
phg BP1767 autotransporterchromosome CDS1858759 1257 + 0.695306
rfaC BP0094 probable heptosyltransferasechromosome CDS91977 1008 + 0.6875
rfaD BP0955 ADP-L-glycero-D-manno-heptose-6-epimerasechromosome CDS993540 990 + 0.651515
rfaE BP0954 ADP-heptose synthasechromosome CDS992602 942 + 0.703822
rfbB BP0109 dTDP-glucose 4,6-dehydratasechromosome CDS106331 1062 - 0.689266
rfbC BP0107 dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS104832 549 - 0.673953
rfbD BP0108 dTDP-4-dehydrorhamnose reductasechromosome CDS105438 897 - 0.729097
rkpK BP3728 putative UDP-glucose 6-dehydrogenasechromosome CDS3937196 1323 - 0.685563
tcfA BP1201 tracheal colonization factor precursorchromosome CDS1264436 1944 + 0.695988
tonB BP3531 siderophore-mediated iron transport proteinchromosome CDS3742906 801 + 0.686642
waaF BP2322 heptosyltransferase IIchromosome CDS2455385 966 + 0.733954
wbpO BP1629 capsular polysaccharide biosynthesis proteinchromosome CDS1713025 1290 + 0.660465
wbpO BP3150 polysaccharide biosynthesis proteinchromosome CDS3360205 1275 - 0.662745
wbpP BP1630 capsular polysaccharide biosynthesis proteinchromosome CDS1714326 1026 + 0.675439
wcbA BP1631 capsular polysaccharide export proteinchromosome CDS1715348 2058 + 0.716229
wcbQ BP1654 putative capsular polysaccharide biosynthesis proteinchromosome CDS1740375 1557 - 0.730893
wza BP1628 putative capsular polysaccharide export proteinchromosome CDS1711905 1098 + 0.663934