TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-08 17:11:07

Gene list

Applied filters:

COG category: Cell wall/membrane biogenesis
Organism: Vibrio cholerae O1 biovar eltor str. N16961, N16961

Number of genes found: 182

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio cholerae O1 biovar eltor str. N16961, N16961
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VC0158 glutamate racemasechromosome I CDS149278 798 + 0.47619
VC0165 conserved hypothetical proteinchromosome I CDS162541 1107 - 0.471545
VC0212 lipid A biosynthesis (kdo)2-(lauroyl)-lipid IVA acyltransferasechromosome I CDS219397 978 - 0.527607
VC0213 lipid A biosynthesis lauroyl acyltransferasechromosome I CDS220385 957 - 0.495298
VC0223 ADP-heptose--LPS heptosyltransferase II, putativechromosome I CDS228876 1038 + 0.514451
VC0224 lipopolysaccharide biosynthesis glycosyltransferase, putativechromosome I CDS229975 780 - 0.491026
VC0225 lipopolysaccharide biosynthesis protein, putativechromosome I CDS230797 1074 - 0.51676
VC0229 hypothetical proteinchromosome I CDS233672 930 - 0.439785
VC0230 hypothetical proteinchromosome I CDS234598 744 - 0.462366
VC0233 3-deoxy-D-manno-octulosonic-acid transferasechromosome I CDS237289 1320 - 0.475
VC0234 conserved hypothetical proteinchromosome I CDS238569 789 - 0.442332
VC0235 lipopolysaccharide biosynthesis protein, putativechromosome I CDS239354 1050 - 0.444762
VC0236 ADP-heptose--LPS heptosyltransferase IIchromosome I CDS240400 1041 - 0.463016
VC0237 conserved hypothetical proteinchromosome I CDS241437 1200 - 0.353333
VC0240 ADP-L-glycero-D-mannoheptose-6-epimerasechromosome I CDS245143 945 - 0.461376
VC0241 mannose-1-phosphate guanylyltransferasechromosome I CDS246529 1398 + 0.421316
VC0243 GDP-mannose 4,6-dehydratasechromosome I CDS249323 1122 + 0.395722
VC0244 perosamine synthasechromosome I CDS250455 1104 + 0.400362
VC0245 rfbG proteinchromosome I CDS251555 1392 + 0.351293
VC0246 lipopolysaccharide/O-antigen transport proteinchromosome I CDS252918 795 + 0.348428
VC0247 lipopolysaccharide/O-antigen transport proteinchromosome I CDS253651 816 + 0.363971
VC0259 lipopolysaccharide biosynthesis protein RfbVchromosome I CDS264254 1233 - 0.353609
VC0260 mannosyl-transferasechromosome I CDS265374 1866 - 0.435155
VC0262 UDP-glucose 4-epimerasechromosome I CDS267392 972 + 0.450617
VC0263 galactosyl-transferase, putativechromosome I CDS268371 555 + 0.437838
VC0265 conserved hypothetical proteinchromosome I CDS270697 1239 - 0.494754
VC0318 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome I CDS331605 1074 + 0.46648
VC0344 N-acetylmuramoyl-L-alanine amidasechromosome I CDS365320 1746 + 0.4748
VC0370 conserved hypothetical proteinchromosome I CDS385659 810 - 0.433333
VC0372 alanine racemase, biosyntheticchromosome I CDS387972 1128 + 0.523936
VC0393 hypothetical proteinchromosome I CDS415806 1794 - 0.482163
VC0395 UTP--glucose-1-phosphate uridylyltransferasechromosome I CDS420633 876 - 0.480594
VC0416 rod shape-determining protein MreCchromosome I CDS443255 891 + 0.484848
VC0417 rod shape-determining protein MreDchromosome I CDS444132 489 + 0.492843
VC0446 organic solvent tolerance proteinchromosome I CDS474882 2364 - 0.466582
VC0450 membrane-bound lytic murein transglycosylase Cchromosome I CDS481683 1191 - 0.465995
VC0480 conserved hypothetical proteinchromosome I CDS510777 864 + 0.452546
VC0487 glucosamine--fructose-6-phosphate aminotransferase (isomerizing)chromosome I CDS517405 1833 + 0.494817
VC0496 hypothetical proteinchromosome I CDS529739 600 + 0.418333
VC0503 conserved hypothetical proteinchromosome I CDS535418 1281 + 0.437939
VC0533 lipoprotein NlpDchromosome I CDS563723 936 + 0.441239
VC0602 penicillin-binding protein 1Bchromosome I CDS628761 2334 + 0.515424
VC0628 conserved hypothetical proteinchromosome I CDS666286 1101 + 0.491371
VC0630 conserved hypothetical proteinchromosome I CDS670598 1302 - 0.456221
VC0632 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidasechromosome I CDS673285 1464 - 0.476776
VC0633 outer membrane protein OmpUchromosome I CDS674828 1053 - 0.459639
VC0674 prolipoprotein diacylglyceryl transferasechromosome I CDS720743 816 + 0.488971
VC0683 lipoprotein signal peptidasechromosome I CDS731552 516 + 0.492248
VC0685 lytB proteinchromosome I CDS732699 963 + 0.507788
VC0700 soluble lytic murein transglycosylasechromosome I CDS748385 1947 + 0.473035
VC0832 toxin co-regulated pilus biosynthesis protein Rchromosome I CDS894412 456 + 0.280702
VC0843 tagE proteinchromosome I CDS904648 909 + 0.347635
VC0844 accessory colonization factor AcfAchromosome I CDS905559 648 - 0.313272
VC0866 transglycosylase, Slt familychromosome I CDS929947 1593 - 0.483992
VC0913 conserved hypothetical proteinchromosome I CDS974049 1059 + 0.492918
VC0917 UDP-N-acetylglucosamine 2-epimerasechromosome I CDS979457 1119 + 0.484361
VC0918 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenasechromosome I CDS980595 1242 + 0.478261
VC0920 exopolysaccharide biosynthesis protein EpsF, putativechromosome I CDS982384 1149 + 0.429939
VC0925 polysaccharide biosynthesis protein, putativechromosome I CDS987913 1098 + 0.468124
VC0927 UDP-N-acetyl-D-mannosamine transferasechromosome I CDS990169 753 + 0.464807
VC0931 conserved hypothetical proteinchromosome I CDS996656 1317 - 0.450266
VC0934 capsular polysaccharide biosynthesis glycosyltransferase, putativechromosome I CDS999242 1398 + 0.450644
VC0936 polysaccharide export-related proteinchromosome I CDS1001910 528 + 0.460227
VC0937 exopolysaccharide biosynthesis protein, putativechromosome I CDS1002462 2214 + 0.474706
VC0947 D-alanyl-D-alanine carboxypeptidasechromosome I CDS1011038 1176 - 0.471939
VC0948 rare lipoprotein A, putativechromosome I CDS1012305 792 - 0.460859
VC0950 penicillin-binding protein 2chromosome I CDS1014214 1917 - 0.488785
VC0954 rare lipoprotein Bchromosome I CDS1018030 642 - 0.478193
VC0958 apolipoprotein N-acyltransferasechromosome I CDS1022053 1518 - 0.511858
VC0972 porin, putativechromosome I CDS1037891 1050 + 0.451429
VC1008 sodium-type flagellar protein MotYchromosome I CDS1078369 885 + 0.481356
VC1039 asmA proteinchromosome I CDS1106562 2112 + 0.476326
VC1107 outer membrane lipoproteins carrier proteinchromosome I CDS1177056 597 + 0.470687
VC1122 cyclopropane-fatty-acyl-phospholipid synthasechromosome I CDS1190413 1299 + 0.472671
VC1195 lipoprotein, putativechromosome I CDS1267848 672 - 0.50744
VC1232 conserved hypothetical proteinchromosome I CDS1306118 675 - 0.514074
VC1271 hypothetical proteinchromosome I CDS1346017 717 - 0.48954
VC1279 transporter, BCCT familychromosome I CDS1353601 1623 + 0.483672
VC1287 periplasmic glucans biosynthesis protein MdoHchromosome I CDS1362386 2166 - 0.508772
VC1312 alanine racemase, putativechromosome I CDS1393726 1287 - 0.494949
VC1318 outer membrane protein OmpVchromosome I CDS1401339 774 - 0.468992
VC1321 hypothetical proteinchromosome I CDS1404753 3072 + 0.485352
VC1409 multidrug resistance protein, putativechromosome I CDS1501627 1455 + 0.48866
VC1447 RTX toxin transporterchromosome I CDS1545399 1404 - 0.504274
VC1496 tail-specific proteasechromosome I CDS1606511 1998 - 0.442442
VC1537 lipoprotein NlpCchromosome I CDS1649484 501 + 0.461078
VC1544 tonB2 proteinchromosome I CDS1657237 621 - 0.520129
VC1563 conserved hypothetical proteinchromosome I CDS1675595 1017 + 0.473943
VC1565 outer membrane protein TolC, putativechromosome I CDS1676745 1260 + 0.490476
VC1577 hypothetical proteinchromosome I CDS1687438 822 - 0.472019
VC1606 conserved hypothetical proteinchromosome I CDS1720423 1431 + 0.480783
VC1607 conserved hypothetical proteinchromosome I CDS1721865 975 + 0.513846
VC1621 agglutination proteinchromosome I CDS1741764 1338 + 0.462631
VC1622 outer membrane protein, putativechromosome I CDS1743103 639 + 0.466354
VC1632 conserved hypothetical proteinchromosome I CDS1757297 1437 + 0.51009
VC1659 conserved hypothetical proteinchromosome I CDS1791030 948 + 0.520042
VC1674 periplasmic linker protein, putativechromosome I CDS1808898 1110 - 0.496396
VC1675 multidrug resistance protein, putativechromosome I CDS1809979 1032 - 0.510659
VC1697 conserved hypothetical proteinchromosome I CDS1830805 831 + 0.494585
VC1749 hypothetical proteinchromosome I CDS1883296 1227 + 0.452323
VC1751 conserved hypothetical proteinchromosome I CDS1885670 879 - 0.453925
VC1756 periplasmic linker protein, putativechromosome I CDS1891336 1095 + 0.511416
VC1776 N-acetylneuraminate lyase, putativechromosome I CDS1926196 897 - 0.431438
VC1835 peptidoglycan-associated lipoproteinchromosome I CDS1976570 519 - 0.473988
VC1837 tolA proteinchromosome I CDS1978487 1071 - 0.471522
VC1854 porin, putativechromosome I CDS1992727 1107 - 0.419151
VC1875 3-deoxy-manno-octulosonate cytidylyltransferasechromosome I CDS2019953 759 - 0.525692
VC1877 tetraacyldisaccharide 4`-kinasechromosome I CDS2020871 1011 - 0.513353
VC1882 conserved hypothetical proteinchromosome I CDS2026557 1245 - 0.510843
VC1884 conserved hypothetical proteinchromosome I CDS2028481 1221 - 0.516789
VC1893 conserved hypothetical proteinchromosome I CDS2040560 861 - 0.492451
VC1956 lytic murein transglycosylase, putativechromosome I CDS2109642 972 - 0.475309
VC1962 lipoproteinchromosome I CDS2113168 492 + 0.481707
VC1987 outer membrane lipoprotein Slp, putativechromosome I CDS2139777 609 - 0.504105
VC2048 vacJ lipoproteinchromosome I CDS2205454 765 - 0.473203
VC2100 conserved hypothetical proteinchromosome I CDS2260275 690 - 0.502899
VC2153 D,D-carboxypeptidase-related proteinchromosome I CDS2304326 750 + 0.472
VC2156 lipoprotein-34 NlpBchromosome I CDS2305382 1020 - 0.494118
VC2157 dihydrodipicolinate synthasechromosome I CDS2306459 879 - 0.485779
VC2175 2-dehydro-3-deoxyphosphooctonate aldolasechromosome I CDS2320824 852 - 0.504695
VC2181 outer membrane lipoprotein LolBchromosome I CDS2326288 636 + 0.462264
VC2192 flagellar protein FlgJchromosome I CDS2339463 939 - 0.487753
VC2213 outer membrane protein OmpAchromosome I CDS2365293 966 - 0.477226
VC2237 membrane-bound lytic murein transglycosylase Dchromosome I CDS2390970 1599 + 0.49656
VC2247 lipid-A-disaccharide synthasechromosome I CDS2401895 1140 - 0.518421
VC2248 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferasechromosome I CDS2403195 789 - 0.495564
VC2250 UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferasechromosome I CDS2404522 1056 - 0.492424
VC2251 outer membrane protein OmpHchromosome I CDS2405587 510 - 0.447059
VC2252 surface antigenchromosome I CDS2406111 2412 - 0.477612
VC2253 conserved hypothetical proteinchromosome I CDS2408571 1359 - 0.486387
VC2298 lipoprotein, putativechromosome I CDS2452869 621 + 0.462158
VC2305 outer membrane protein OmpKchromosome I CDS2457746 891 + 0.434343
VC2312 membrane-bound lytic murein transglycosylase Achromosome I CDS2462887 1107 - 0.495935
VC2396 UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylasechromosome I CDS2564032 918 - 0.471678
VC2399 cell division protein FtsQchromosome I CDS2567529 783 - 0.417625
VC2400 UDP-N-acetylmuramate--alanine ligasechromosome I CDS2568493 1521 - 0.506903
VC2401 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome I CDS2569967 1065 - 0.528638
VC2403 UDP-N-acetylmuramoylalanine--D-glutamateligasechromosome I CDS2572228 1404 - 0.497863
VC2404 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome I CDS2573574 1083 - 0.497692
VC2405 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligasechromosome I CDS2574653 1362 - 0.506608
VC2406 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligasechromosome I CDS2576011 1539 - 0.527615
VC2407 penicillin-binding protein 3chromosome I CDS2577515 1743 - 0.51463
VC2409 conserved hypothetical proteinchromosome I CDS2579584 951 - 0.502629
VC2436 outer membrane protein TolCchromosome I CDS2610550 1317 + 0.487472
VC2463 GTP-binding protein LepAchromosome I CDS2645187 1794 - 0.506689
VC2514 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome I CDS2702389 1260 - 0.51746
VC2523 conserved hypothetical proteinchromosome I CDS2708554 981 + 0.496432
VC2542 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligasechromosome I CDS2723240 1356 - 0.5059
VC2548 conserved hypothetical proteinchromosome I CDS2730790 1749 - 0.49514
VC2567 conserved hypothetical proteinchromosome I CDS2748938 573 - 0.500873
VC2635 penicillin-binding protein 1Achromosome I CDS2805704 2508 + 0.496013
VC2762 UDP-N-acetylglucosamine pyrophosphorylasechromosome I CDS2948077 1362 - 0.513216
VC2774 glucose inhibited division protein Bchromosome I CDS2958519 633 - 0.478673
VCA0045 protease-related proteinchromosome II CDS53551 1185 + 0.484388
VCA0079 conserved hypothetical proteinchromosome II CDS89148 1293 + 0.477958
VCA0181 hypothetical proteinchromosome II CDS199466 876 + 0.486301
VCA0270 D-alanyl-D-alanine carboxypeptidasechromosome II CDS288819 1170 + 0.487179
VCA0317 lipoprotein Blcchromosome II CDS325225 516 + 0.428295
VCA0350 lipoprotein Blcchromosome II CDS343997 516 + 0.416667
VCA0387 toxin resistance proteinchromosome II CDS366171 510 + 0.409804
VCA0406 lipoprotein Blcchromosome II CDS378083 516 + 0.426357
VCA0443 lipoprotein Blcchromosome II CDS398645 516 + 0.418605
VCA0483 hypothetical proteinchromosome II CDS422784 669 + 0.381166
VCA0572 D-alanine--D-alanine ligasechromosome II CDS509159 1005 - 0.424876
VCA0612 large-conductance mechanosensitive channelchromosome II CDS547439 411 + 0.442822
VCA0639 AcrA/AcrE family proteinchromosome II CDS575853 1005 - 0.523383
VCA0650 hypothetical proteinchromosome II CDS584463 1137 - 0.514512
VCA0659 protein F-related proteinchromosome II CDS596382 624 - 0.490385
VCA0714 diacylglycerol kinasechromosome II CDS658358 357 + 0.470588
VCA0774 UDP-glucose 4-epimerasechromosome II CDS716793 1017 - 0.487709
VCA0780 UDP-glucose 6-dehydrogenasechromosome II CDS722216 1167 - 0.475578
VCA0802 conserved hypothetical proteinchromosome II CDS743300 1974 - 0.448835
VCA0817 hypothetical proteinchromosome II CDS763686 585 + 0.470085
VCA0854 conserved hypothetical proteinchromosome II CDS805131 1260 - 0.511111
VCA0867 outer membrane protein OmpWchromosome II CDS819609 654 - 0.429664
VCA0870 D-alanyl-D-alanine endopeptidasechromosome II CDS821216 951 + 0.461619
VCA0877 hydrolase, putativechromosome II CDS830711 1077 + 0.513463
VCA0910 tonB1 proteinchromosome II CDS865691 750 + 0.501333
VCA1008 outer membrane protein, putativechromosome II CDS959181 996 + 0.472892
VCA1042 Ccm2-related proteinchromosome II CDS993043 402 - 0.402985
VCA1043 tagE proteinchromosome II CDS993354 945 - 0.4
VCA1080 secretion protein, HlyD familychromosome II CDS1033253 1446 + 0.475795