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2024-05-05 23:58:59

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Clostridium perfringens str. 13, 13

Number of genes found: 166

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Clostridium perfringens str. 13, 13
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
CPE0041 probable prolipoprotein diacylglyceryl transferasechromosome CDS53398 789 + 0.296578
CPE0115 probable N-acetylmuramoyl-L-alanine amidasechromosome CDS155002 942 - 0.279193
CPE0155 conserved hypothetical proteinchromosome CDS197405 2172 + 0.28361
CPE0156 probable surface proteinchromosome CDS199580 1569 + 0.298917
CPE0157 probable fimbria-associated proteinchromosome CDS201393 756 + 0.265873
CPE0213 conserved hypothetical proteinchromosome CDS279879 816 - 0.301471
CPE0221 hypothetical proteinchromosome CDS293350 648 + 0.297839
CPE0222 conserved hypothetical proteinchromosome CDS293999 564 + 0.280142
CPE0250 capsular polysaccharide biosynthesis proteinchromosome CDS323804 774 + 0.284238
CPE0260 conserved hypothetical proteinchromosome CDS330592 1137 + 0.261214
CPE0269 probable ABC transporterchromosome CDS346988 813 + 0.292743
CPE0270 probable ABC transporterchromosome CDS347818 1173 + 0.297528
CPE0271 conserved hypothetical proteinchromosome CDS349004 1284 + 0.278816
CPE0272 hypothetical proteinchromosome CDS350306 1236 + 0.275081
CPE0273 probable ABC transporterchromosome CDS351555 1182 + 0.2978
CPE0274 hypothetical proteinchromosome CDS352851 1434 + 0.252441
CPE0278 conserved hypothetical proteinchromosome CDS357677 1299 + 0.333333
CPE0301 probable carboxyl-terminal proteinasechromosome CDS381701 1287 + 0.315462
CPE0351 probable penicillin-binding proteinchromosome CDS446228 1464 + 0.336066
CPE0382 probable autolytic lysozymechromosome CDS495171 1029 + 0.29932
CPE0461 capsular polysaccharide biosynthesis proteinchromosome CDS582364 663 + 0.260935
CPE0463 capsular polysaccharide biosynthesis proteinchromosome CDS583751 1914 + 0.292059
CPE0464 spore coat polysaccharide biosynthesis proteinchromosome CDS585795 1143 + 0.31846
CPE0473 probable UDP-galactose phosphate transferasechromosome CDS593436 618 + 0.297735
CPE0475 capsular polysaccharide biosynthesis proteinchromosome CDS594774 1158 + 0.262522
CPE0476 capsular polysaccharide biosynthesis proteinchromosome CDS595897 1107 + 0.238482
CPE0477 probable beta-glycosyltransferasechromosome CDS597023 885 + 0.270056
CPE0479 capsular polysaccharide biosynthesis proteinchromosome CDS599019 1110 + 0.271171
CPE0480 capsular polysaccharide biosynthsis proteinchromosome CDS600146 1191 + 0.27204
CPE0481 beta-1,4-galactosyltransferasechromosome CDS601394 1029 + 0.238095
CPE0482 probable glycero-phosphotransferasechromosome CDS602440 1155 + 0.231169
CPE0483 probable glycerol-3-phosphate cytidyltransferasechromosome CDS603657 423 + 0.274232
CPE0484 capsular polysaccharide biosynthsis proteinchromosome CDS604095 993 + 0.23565
CPE0485 capsular polysaccharide biosynthsis proteinchromosome CDS605106 1191 + 0.254408
CPE0486 probable galactosyl transferasechromosome CDS606317 1188 + 0.23064
CPE0488 capsular polysaccharide biosynthsis proteinchromosome CDS608456 1167 + 0.25964
CPE0491 capsular polysaccharide biosynthsis proteinchromosome CDS613798 699 + 0.296137
CPE0493 capsular polysaccharide biosynthsis proteinchromosome CDS615362 669 + 0.309417
CPE0494 probable NDP-suger dehydrogenasechromosome CDS616051 1347 + 0.305865
CPE0495 probable mannose-1-phosphate guanylyltransferasechromosome CDS617414 1047 + 0.281757
CPE0496 N-acetyl-mannosamine transferasechromosome CDS618495 726 + 0.275482
CPE0497 hypothetical proteinchromosome CDS619235 435 + 0.255172
CPE0498 probable hexosyltransferasechromosome CDS619663 657 + 0.237443
CPE0499 probable hexosyltransferasechromosome CDS620321 1128 + 0.244681
CPE0500 probable hexosyltransferasechromosome CDS621466 1230 + 0.235772
CPE0501 capsular polysaccharide biosynthsis proteinchromosome CDS622784 981 + 0.222222
CPE0502 probable lipopolysaccharide biosynthesis proteinchromosome CDS623775 1104 + 0.240036
CPE0504 spore coat polysaccharide biosynthesis proteinchromosome CDS626387 1047 + 0.204394
CPE0558 probable glycine betaine/carnitine/choline ABC transporterchromosome CDS692276 1554 + 0.294723
CPE0603 conserved hypothetical proteinchromosome CDS753127 1809 + 0.28911
CPE0604 conserved hypothetical proteinchromosome CDS755187 1845 + 0.272087
CPE0620 hypothetical proteinchromosome CDS776014 1215 + 0.217284
CPE0621 glycosyltransferasechromosome CDS777225 849 + 0.261484
CPE0622 hypothetical proteinchromosome CDS778167 741 + 0.265857
CPE0714 conserved hypothetical proteinchromosome CDS887767 1143 - 0.272966
CPE0719 probable capsular polysaccharide biosynthesis proteinchromosome CDS893608 1005 + 0.256716
CPE0868 alanine racemasechromosome CDS1068014 1161 - 0.307494
CPE0886 hypothetical proteinchromosome CDS1089786 786 - 0.265903
CPE1033 probable choline kinasechromosome CDS1235303 801 - 0.230961
CPE1132 hypothetical proteinchromosome CDS1324849 2952 + 0.307927
CPE1138 conserved hypothetical proteinchromosome CDS1332512 915 + 0.299454
CPE1188 probable UDP-N-acetylmuramyl tripeptide synthetasechromosome CDS1384439 1356 + 0.282448
CPE1201 hypothetical proteinchromosome CDS1403122 918 - 0.269063
CPE1285 hypothetical proteinchromosome CDS1514831 1098 - 0.287796
CPE1314 muramidasechromosome CDS1554845 966 - 0.315735
CPE1361 conserved hypothetical proteinchromosome CDS1604254 876 - 0.307078
CPE1379 probable D-alanyl-D-alanine carboxypeptidasechromosome CDS1630393 792 - 0.289141
CPE1405 probable N-acetylmuramoyl-L-alanine amidasechromosome CDS1658258 726 - 0.307163
CPE1502 hypothetical protein 10Cchromosome CDS1754150 1014 - 0.310651
CPE1521 hypothetical proteinchromosome CDS1779183 414 - 0.210145
CPE1542 conserved hypothetical proteinchromosome CDS1804830 1131 - 0.312113
CPE1556 conserved hypothetical proteinchromosome CDS1823828 2016 - 0.275298
CPE1573 probable glutamate-cysteine ligasechromosome CDS1841356 2337 - 0.279846
CPE1663 conserved hypothetical proteinchromosome CDS1937338 1215 - 0.297119
CPE1693 conserved hypothetical proteinchromosome CDS1971899 1008 - 0.325397
CPE1814 stage IV sporulation protein Bchromosome CDS2091957 1161 - 0.287683
CPE1858 hypothetical proteinchromosome CDS2126479 747 - 0.24498
CPE1865 conserved hypothetical proteinchromosome CDS2135386 933 - 0.305466
CPE1869 conserved hypothetical proteinchromosome CDS2139763 1287 - 0.26418
CPE1981 conserved hypothetical proteinchromosome CDS2268057 711 + 0.319269
CPE1992 conserved hypothetical proteinchromosome CDS2281978 546 - 0.291209
CPE2071 conserved hypothetical proteinchromosome CDS2371965 1401 - 0.296217
CPE2135 hypothetical proteinchromosome CDS2445832 843 - 0.271649
CPE2140 probable penicillin-binding protein 2chromosome CDS2450087 3072 - 0.309896
CPE2141 hypothetical proteinchromosome CDS2453167 498 - 0.271084
CPE2182 conserved hypothetical proteinchromosome CDS2503719 771 - 0.315175
CPE2196 UDP-N-acetylglucosamine 2-epimerasechromosome CDS2516741 1155 - 0.300433
CPE2206 conserved hypothetical proteinchromosome CDS2525092 1125 + 0.260444
CPE2215 hypothetical proteinchromosome CDS2536618 1563 - 0.288548
CPE2219 probable mannosyltransferase Bchromosome CDS2541142 1128 + 0.275709
CPE2223 probable mannosyltransferase Bchromosome CDS2545323 1146 + 0.290576
CPE2237 conserved hypothetical proteinchromosome CDS2558205 1890 + 0.27037
CPE2244 hypothetical proteinchromosome CDS2571905 756 + 0.247354
CPE2308 mannose-1-phosphate guanylyltransferasechromosome CDS2653069 1071 - 0.31746
CPE2315 conserved hypothetical proteinchromosome CDS2661982 678 - 0.317109
CPE2353 probable spore cortex-lytic enzymechromosome CDS2712535 603 + 0.320066
CPE2367 germination specific N-acetylmuramoyl-L-alanine amidasechromosome CDS2729132 672 - 0.302083
CPE2446 hypothetical proteinchromosome CDS2793657 1662 - 0.276173
CPE2490 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS2851159 1365 - 0.307692
CPE2514 probable prolipoprotein diacylglyceryl transferasechromosome CDS2878466 771 - 0.315175
CPE2560 spore cortex-lytic enzymechromosome CDS2930754 1317 - 0.323462
CPE2568 probable glutamate racemasechromosome CDS2939866 783 - 0.309068
CPE2611 conserved hypothetical proteinchromosome CDS2986894 1053 - 0.311491
CPE2625 probable tagatose-6-phosphate aldose/ketose isomerasechromosome CDS3000370 1173 + 0.287298
CPE2644 conserved hypothetical proteinchromosome CDS3016718 861 - 0.275261
PCP33 hypothetical proteinpCP13 CDS23553 243 + 0.234568
PCP44 probable cell wall-binding proteinpCP13 CDS31168 1164 - 0.312715
PCP56 conserved hypothetical proteinpCP13 CDS44413 597 - 0.20938
PCP62 hypothetical proteinpCP13 CDS53114 447 - 0.214765
alr probable alanine racemasechromosome CDS1268707 1053 + 0.25831
argI AlgI-related proteinchromosome CDS1771353 1368 - 0.25
cbh choloylglycine hydrolasechromosome CDS882605 990 + 0.274747
cfa probable cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS1257260 1185 - 0.289451
cna probable collagen adhesinpCP13 CDS45255 4107 - 0.295349
cotS probable spore coat proteinchromosome CDS2302395 1080 + 0.257407
cotS probable spore coat proteinchromosome CDS2540029 1005 - 0.275622
cphA cyanophycin synthetasechromosome CDS2533080 2625 - 0.295619
dacB D-alanyl-D-alanine carboxypeptidasechromosome CDS2081174 876 - 0.323059
dacF D-alanyl-D-alanine carboxypeptidasechromosome CDS2263061 1272 + 0.309748
dacF serine-type D-Ala-D-Ala carboxypeptidasechromosome CDS2085161 1209 - 0.315136
dacF D-alanyl-D-alanine carboxypeptidasechromosome CDS2433177 1335 + 0.277154
dapA dihydrodipicolinate synthasechromosome CDS2184296 876 + 0.288813
ddlA D-alanine-D-alanine ligasechromosome CDS1555884 906 - 0.302428
ddlB D-alanine-D-alanine ligasechromosome CDS1003890 909 + 0.281628
dgkA probable diacylglycerol kinasechromosome CDS2309820 699 - 0.310443
entB probable enterotoxinchromosome CDS1597967 1650 - 0.321212
entD probable enterotoxinchromosome CDS758558 1908 + 0.311845
galE UDP-glucose 4-epimerasechromosome CDS365742 987 - 0.323202
galE UDP-glucose 4-epimerasechromosome CDS633797 1017 + 0.310718
galF UTP-glucose-1-phosphate uridylyltransferasechromosome CDS635095 945 + 0.328042
galF UTP-glucose-1-phosphate uridylyltransferasechromosome CDS629121 921 + 0.331162
gidB glucose-inhibited division proteinchromosome CDS3024120 720 - 0.286111
glmS glutamine-fructose-6-phosphate transaminasechromosome CDS2677051 1833 - 0.316967
lepA GTP-binding proteinchromosome CDS2329405 1803 - 0.332224
licA probable choline kinasechromosome CDS786364 1869 + 0.275548
licC probable lic-1 operon proteinchromosome CDS789373 684 + 0.277778
lytB probable lysis tolerance proteinchromosome CDS1288664 849 + 0.290931
mraY phospho-N-acetylmuramoyl-pentapeptidetransferaseechromosome CDS2128535 954 - 0.303983
mreC cell-shape determining proteinchromosome CDS2453680 852 - 0.302817
mscL large-conductive mechanosensitive channel homologuechromosome CDS225957 459 - 0.294118
murA UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS2982329 1254 - 0.349282
murA UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS2505740 1266 - 0.312006
murB UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS449859 915 + 0.322404
murC UDP-N-acetylmuramate-alanine ligasechromosome CDS2854346 1308 + 0.311162
murD UDP-N-acetylmuramoylalanine D-glutamate ligasechromosome CDS2812125 1377 - 0.288308
murE UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligasechromosome CDS2130930 1455 - 0.294845
murF UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligasechromosome CDS2129556 1362 - 0.292217
murG UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl N-acetylglucosamine transferasechromosome CDS2360400 1074 - 0.277467
nagK hyaluronidasechromosome CDS1500861 3492 - 0.314147
nanA acylneuraminate lyasechromosome CDS236997 867 + 0.303345
pac probable penicillin acylasechromosome CDS1293432 984 + 0.298781
pbpA penicillin-binding proteins 1A/1Bchromosome CDS2250521 2040 + 0.322059
rfbA glucose-1-phosphate thymidylyltransferasechromosome CDS772458 882 + 0.316327
rfbB dTDP-glucose 4,6-dehydratasechromosome CDS774940 1050 + 0.297143
rfbC dTDP-4-dehydrorhamnose 3,5-epimerasechromosome CDS773532 483 + 0.302277
rfbD dTDP-4-dehydrorhamnose reductasechromosome CDS774028 885 + 0.290395
rfbN probable rhamnosyl transferasechromosome CDS771521 915 + 0.264481
rfbP probable undecaprenyl phosphate galactosephosphotransferasechromosome CDS770858 663 + 0.282051
spoIIIAC stage III sporulation protein ACchromosome CDS2106664 198 - 0.282828
spoVD stage V sporulation protein Dchromosome CDS700806 2187 - 0.320073
spoVD stage V sporulation protein Dchromosome CDS2132479 2220 - 0.322973
spoVD stage V sporulation protein Dchromosome CDS2155331 2184 - 0.314103
spoVD stage V sporulation protein Dchromosome CDS2046852 1668 - 0.288969
spoVG stage V sporulation protein Gchromosome CDS2852733 273 - 0.300366
tagA probable teichoic acid biosynthesis protein Achromosome CDS2141049 717 - 0.287308
tagO probable undecaprenyl-phosphate N-acetylglucosaminyltransferasechromosome CDS1906533 960 - 0.307292