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2024-05-07 23:38:03

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Symbiobacterium thermophilum, IAM14863

Number of genes found: 143

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Symbiobacterium thermophilum, IAM14863
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA STH1367 conserved hypothetical proteinchromosome CDS1515050 1038 - 0.703276
NA STH1206 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate ligasechromosome CDS1341917 1494 + 0.697456
NA STH752 putative UDP-glucuronosyltransferase,chromosome CDS837122 1200 - 0.739167
NA STH714 conserved hypothetical proteinchromosome CDS787784 681 - 0.712188
NA STH342 glutamate racemasechromosome CDS380288 834 + 0.694245
NA STH1500 putative membrane-associated Zn-dependent proteasechromosome CDS1636262 1035 + 0.674396
NA STH1585 D-alanyl-D-alanine carboxypeptidasechromosome CDS1724504 1206 + 0.715589
NA STH2587 D-alanyl-D-alanine carboxypeptidasechromosome CDS2773486 1125 - 0.675556
NA STH783 spore coat proteinchromosome CDS880589 957 - 0.719958
NA STH3302 putative flavin reductasechromosome CDS3528009 624 + 0.668269
NA STH1212 UDP-N-acetylglucosamine enolpyruvyl transferasechromosome CDS1349289 1326 + 0.702866
NA STH1549 dihydrodipicolinate synthasechromosome CDS1684544 882 + 0.717687
NA STH3311 putative metalloendopeptidasechromosome CDS3537196 1308 - 0.672783
NA STH2715 UDP-glucose 4-epimerasechromosome CDS2913069 966 - 0.534162
NA STH777 glucose-1-phosphate thymidylyltransferasechromosome CDS873946 1095 + 0.739726
NA STH1201 putative S-adenosylmethionine-dependent methyltransferasechromosome CDS1331688 957 + 0.729363
NA STH785 UDP-glucose dehydrogenasechromosome CDS882401 1296 - 0.737654
NA STH3039 N-acetylmuramoyl-L-alanine amidasechromosome CDS3254589 765 - 0.713726
NA STH1362 glycosyl transferasechromosome CDS1507965 729 + 0.694102
NA STH1066 UDP-N-acetylmuramyl tripeptide synthasechromosome CDS1178633 1395 + 0.707527
NA STH2707 putative glycosyl transferasechromosome CDS2902949 1080 - 0.521296
NA STH102 putative peptidasechromosome CDS121778 738 + 0.749322
NA STH1119 glycosyltransferase, group Ichromosome CDS1244901 2274 - 0.724274
NA STH3240 UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS3455279 1416 - 0.677966
NA STH368 hypothetical proteinchromosome CDS411312 855 + 0.698246
NA STH989 D-alanyl-D-alanine carboxypeptidase-like proteinchromosome CDS1106849 1698 - 0.71437
NA STH1368 UDP-N-acetyl-D-mannosamine dehydrogenasechromosome CDS1516307 1074 + 0.711359
NA STH852 putative transglycosylasechromosome CDS964937 507 + 0.666667
NA STH1370 putative UDP-glucose 4-epimerasechromosome CDS1518280 993 + 0.72004
NA STH779 putative lipopolysaccharide N-acetylglucosaminyltransferasechromosome CDS876374 1146 + 0.732112
NA STH1889 conserved domain proteinchromosome CDS2032348 1959 + 0.697805
NA STH678 ABC transporter permease proteinchromosome CDS746346 2559 + 0.697538
NA STH404 putative NADH-ubiquinone oxidoreductasechromosome CDS441426 912 - 0.720395
NA STH2131 penicillin-binding proteinchromosome CDS2277140 1755 - 0.699145
NA STH877 peptidase M23/M37 familychromosome CDS987948 825 - 0.69697
NA STH2731 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate ligasechromosome CDS2932771 1491 - 0.720993
NA STH2376 conserved hypothetical proteinchromosome CDS2563829 705 - 0.697872
NA STH882 cell wall degradation proteinchromosome CDS994233 357 - 0.703081
NA STH1376 conserved hypothetical proteinchromosome CDS1523557 993 - 0.726083
NA STH437 penicillin-binding proteinchromosome CDS470120 2400 + 0.712917
NA STH1373 alpha 1,2 N-acetylglucosamine transferasechromosome CDS1520989 1095 + 0.736986
NA STH3304 UDP-N-acetylglucosamine enolpyruvyl transferasechromosome CDS3529286 1275 - 0.704314
NA STH545 hypothetical proteinchromosome CDS587436 933 - 0.700965
NA STH119 hypothetical proteinchromosome CDS139772 354 + 0.734463
NA STH1375 conserved hypothetical proteinchromosome CDS1522785 702 - 0.740741
NA STH975 conserved hypothetical proteinchromosome CDS1091029 1554 + 0.727156
NA STH3272 putative membrane efflux proteinchromosome CDS3491679 1173 + 0.759591
NA STH780 putative lipopolysaccharide N-acetylglucosaminyltransferasechromosome CDS877522 1128 + 0.745567
NA STH1718 polysaccharide deacetylasechromosome CDS1865060 987 + 0.756839
NA STH1735 conserved domain proteinchromosome CDS1884307 336 - 0.702381
NA STH781 UDP-glucose 4-epimerasechromosome CDS878653 879 + 0.731513
NA STH329 sporulation specific N-acetylmuramoyl-L-alanine amidasechromosome CDS368087 855 + 0.676023
NA STH409 prolipoprotein diacylglyceryl transferasechromosome CDS445111 807 - 0.677819
NA STH2626 conserved hypothetical proteinchromosome CDS2819210 1134 - 0.674603
NA STH740 hypothetical proteinchromosome CDS825443 516 + 0.674419
NA STH1215 putative cell division proteinchromosome CDS1353110 825 + 0.72
NA STH2627 glycine betaine/carnitine/choline ABC transporter substrate-binding proteinchromosome CDS2820529 915 - 0.651366
NA STH1486 conserved hypothetical protein related to flagellar biosynthesischromosome CDS1624895 705 + 0.67234
NA STH1242 signal peptidase IIchromosome CDS1380654 459 + 0.649237
NA STH1120 putative mannose-1-phosphate guanyltransferasechromosome CDS1247181 1032 - 0.687016
NA STH1205 soprulation-specific penicillin-binding proteinchromosome CDS1339692 2124 + 0.685499
NA STH978 conserved hypothetical proteinchromosome CDS1094499 2346 + 0.716539
NA STH60 putative carboxy-terminal processing proteinasechromosome CDS78667 1398 + 0.702432
NA STH1702 putative dolichyl-phosphate mannose synthasechromosome CDS1849439 1119 - 0.675603
NA STH1677 conserved domain proteinchromosome CDS1821152 1983 - 0.719112
NA STH1963 conserved domain proteinchromosome CDS2101970 423 + 0.664303
NA STH1279 glucosamine--fructose-6-phosphateaminotransferas echromosome CDS1418119 1167 + 0.720651
NA STH1510 glycosyltransferase involved in cell wall biogenesischromosome CDS1646671 732 + 0.647541
NA STH2662 putative poly-gamma-glutamate biosynthesis enzymechromosome CDS2853428 1167 - 0.724079
NA STH81 undecaprenyl-phosphateN-acetylglucosaminyltransferasechromosome CDS101938 1077 + 0.686165
NA STH2817 putative glycosyl transferasechromosome CDS3030444 1071 + 0.688142
NA STH1135 secreted peptidasechromosome CDS1266804 663 + 0.491704
NA STH1075 putative D-alanyl-D-alanine carboxypeptidasechromosome CDS1189287 819 + 0.714286
NA STH1121 penicillin-binding proteinchromosome CDS1249920 2862 - 0.682739
NA STH3327 putative peptidasechromosome CDS3551933 1050 - 0.68
NA STH692 UDP-N-acetylpyruvoylglucosamine reductasechromosome CDS760987 1086 + 0.713628
NA STH532 putative diacylglycerol kinasechromosome CDS574326 486 + 0.720165
NA STH512 D-alanine--D-alanine ligasechromosome CDS552572 1101 + 0.684832
NA STH1387 conserved hypothetical proteinchromosome CDS1536143 729 + 0.659808
NA STH1369 UDP-glucose 4-epimerasechromosome CDS1517352 915 + 0.656831
NA STH68 putative peptidasechromosome CDS88729 759 + 0.754941
NA STH2827 murein transglycosylase-like proteinchromosome CDS3044867 639 + 0.740219
NA STH2819 putative oxidoreductasechromosome CDS3033348 1029 - 0.719145
NA STH1076 conserved hypothetical proteinchromosome CDS1190213 1083 + 0.652816
NA STH2593 N-acetylmuramoyl-L-alanine amidasechromosome CDS2783060 678 - 0.710914
NA STH2709 conserved domain proteinchromosome CDS2905997 1209 - 0.525227
NA STH2712 putative glycosyl transferasechromosome CDS2909176 1086 - 0.529466
NA STH1695 conserved domain proteinchromosome CDS1841656 789 - 0.712294
NA STH1031 UDP-N-acetylmuramoylalanine D-glutamate ligasechromosome CDS1147087 1368 + 0.715643
NA STH1210 UDP-N-acetylglucosamine-N-acetylmuramyl- pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome CDS1347224 1125 + 0.753778
NA STH1809 conserved hypothetical proteinchromosome CDS1952698 1590 - 0.720126
NA STH482 elongation factor family GTP-binding proteinchromosome CDS520055 1812 + 0.646247
NA STH2915 UDP-N-acetylglucosamine enolpyruvyl transferasechromosome CDS3142767 1272 - 0.699686
NA STH2132 conserved hypothetical proteinchromosome CDS2279009 1026 - 0.705653
NA STH447 conserved domain proteinchromosome CDS486020 1344 + 0.721726
NA STH1624 glycosyl transferasechromosome CDS1765051 1161 + 0.718346
NA STH1226 conserved hypothetical proteinchromosome CDS1362673 903 + 0.738649
NA STH1098 group 1 family glycosyl transferasechromosome CDS1215930 1119 + 0.733691
NA STH82 UDP-N-acetylglucosamine 2-epimerasechromosome CDS103132 1143 + 0.690289
NA STH1211 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS1348363 927 + 0.70658
NA STH1372 putative oxidoreductasechromosome CDS1519994 999 + 0.777778
NA STH1379 hypothetical protein, proline-richchromosome CDS1525678 1779 + 0.756043
NA STH526 conserved hypothetical proteinchromosome CDS567236 1551 - 0.73501
NA STH2375 D-alanyl-D-alanine carboxypeptidasechromosome CDS2562238 1275 - 0.696471
NA STH138 putative N-acetyl-mannosamine transferasechromosome CDS160117 753 + 0.727756
NA STH3286 conserved hypothetical proteinchromosome CDS3510430 597 - 0.737018
NA STH1100 conserved hypothetical proteinchromosome CDS1217560 1623 + 0.73321
NA STH1101 glycosyl transferasechromosome CDS1219209 1056 + 0.761364
NA STH1366 conserved hypothetical proteinchromosome CDS1514052 1002 - 0.703593
NA STH1815 D-alanyl-D-alanine carboxypeptidasechromosome CDS1958778 1212 - 0.682343
NA STH196 glucosamine--fructose-6-phosphateaminotransferas echromosome CDS222484 1830 + 0.713115
NA STH887 conserved domain proteinchromosome CDS1003006 1797 + 0.684474
NA STH1371 mannose-1-phosphate guanyltransferasechromosome CDS1519305 693 + 0.730159
NA STH883 conserved hypothetical proteinchromosome CDS994792 1338 + 0.714499
NA STH2713 UTP-glucose-1-phosphate uridylyltransferasechromosome CDS2910367 885 - 0.584181
NA STH142 carboxy-terminal processing proteasechromosome CDS164003 1263 + 0.682502
NA STH1363 glycosyltransferase-like proteinchromosome CDS1508693 2238 + 0.71403
NA STH2716 sugar transferase involved in lipopolysaccharide synthesischromosome CDS2914055 1377 - 0.555556
NA STH3266 group II intron-encoding maturasechromosome CDS3486577 468 - 0.690171
NA STH2392 soprulation specific penicillin-binding proteinchromosome CDS2576189 2142 - 0.714286
NA STH1207 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanyl ligasechromosome CDS1343407 1566 + 0.754151
NA STH2958 spore cortex-lytic enzyme precursorchromosome CDS3180745 714 + 0.711485
NA STH3275 putative membrane efflux proteinchromosome CDS3495836 1080 + 0.728704
NA STH2711 UDP-glucose 4-epimerasechromosome CDS2908161 987 - 0.54306
NA STH2936 alanine racemasechromosome CDS3160886 1134 - 0.726631
NA STH3312 conserved domain proteinchromosome CDS3538637 783 - 0.684547
NA STH864 cell wall hydrolasechromosome CDS976163 405 + 0.671605
NA STH3326 conserved hypothetical proteinchromosome CDS3551523 414 - 0.678744
NA STH1089 spore cortex-lytic enzyme precursorchromosome CDS1208576 675 + 0.705185
NA STH562 tagatose-6-phosphate aldose/ketose isomerasechromosome CDS603277 1161 - 0.693368
NA STH2127 penicillin-binding proteinchromosome CDS2272521 2574 + 0.732323
NA STH2503 metalloendopeptidase-related proteinchromosome CDS2688798 579 - 0.727116
NA STH910 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductasechromosome CDS1029402 888 + 0.67455
NA STH1208 phospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS1345018 1005 + 0.704478
NA STH2918 UDP-N-acetylmuramate-alanine ligasechromosome CDS3146405 1449 - 0.708765
NA STH369 conserved hypothetical proteinchromosome CDS412346 234 + 0.641026
NA STH1391 large conductance mechanosensitive channel proteinchromosome CDS1539477 441 - 0.648526
agaS STH1252 tagatose-6-phosphate aldose/ketose isomerasechromosome CDS1388012 1206 - 0.708126
gidB STH3334 Glucose inhibited division protein Bchromosome CDS3559485 741 - 0.711201
mreC STH373 rod shape-determining proteinchromosome CDS415007 864 + 0.671296
spoIVB STH1833 stage IV sporulation protein Bchromosome CDS1979309 1410 - 0.690071
spoVD STH1991 stage V sporulation protein Dchromosome CDS2131934 1653 - 0.746521
spoVG STH3241 stage V sporulation protein Gchromosome CDS3456803 543 - 0.661142