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2024-05-03 20:54:25

Gene list

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COG category: Cell wall/membrane biogenesis
Organism: Nocardia farcinica IFM 10152, IFM 10152

Number of genes found: 160

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Nocardia farcinica IFM 10152, IFM 10152
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA nfa26040 hypothetical proteinchromosome CDS2773030 660 - 0.716667
NA nfa23980 putative glycosyltransferasechromosome CDS2560714 1218 - 0.713465
NA nfa23010 hypothetical proteinchromosome CDS2475411 621 - 0.750403
NA nfa31110 putative peptidasechromosome CDS3294208 693 + 0.748918
NA nfa46360 putative mannose-1-phosphate guanyltransferasechromosome CDS4825381 1080 - 0.725926
NA nfa49150 putative glycosyltransferasechromosome CDS5131548 1128 - 0.755319
NA nfa2880 putative cyclopropane fatty acid synthasechromosome CDS302879 1317 - 0.682612
NA nfa47360 putative glycosyltransferasechromosome CDS4946787 939 - 0.722045
NA nfa48310 hypothetical proteinchromosome CDS5045014 1005 - 0.682587
NA nfa3020 hypothetical proteinchromosome CDS315297 1239 - 0.722357
NA nfa35210 putative muconate cycloisomerasechromosome CDS3733734 1104 + 0.709239
NA nfa17580 putative methyltransferasechromosome CDS1911369 975 + 0.721026
NA nfa23990 putative glycosyltransferasechromosome CDS2562182 1092 + 0.740842
NA nfa7220 putative oxidoreductasechromosome CDS783154 987 - 0.720365
NA nfa9690 hypothetical proteinchromosome CDS1068960 1122 + 0.734403
NA nfa17200 hypothetical proteinchromosome CDS1870401 1065 - 0.725822
NA nfa25780 putative glycosyltransferasechromosome CDS2746861 1275 - 0.72
NA nfa17600 putative penicillin-binding proteinchromosome CDS1913397 1890 + 0.713228
NA nfa53210 putative glycosyltransferasechromosome CDS5622825 1263 + 0.710214
NA nfa17770 hypothetical proteinchromosome CDS1935560 609 + 0.720854
NA nfa24150 putative dehydrogenasechromosome CDS2578367 1029 + 0.74344
NA nfa2180 putative ABC transporter ATP-binding proteinchromosome CDS229485 852 - 0.665493
NA nfa53220 hypothetical proteinchromosome CDS5624084 2064 + 0.718023
NA pnf11500 hypothetical proteinpNF1 CDS169750 1071 - 0.619048
NA pnf1470 putative peptidasepNF1 CDS53715 807 - 0.685254
NA nfa29880 hypothetical proteinchromosome CDS3173040 810 - 0.735802
NA nfa5560 putative peptidasechromosome CDS571129 981 - 0.737003
NA nfa49220 putative transporterchromosome CDS5140210 1638 + 0.697802
NA nfa43210 hypothetical proteinchromosome CDS4478704 1320 - 0.756061
NA nfa2120 putative glycosyltransferasechromosome CDS222603 1005 - 0.691542
NA nfa36700 hypothetical proteinchromosome CDS3885548 1668 - 0.745204
NA nfa51920 putative glycosyltransferasechromosome CDS5490079 1356 - 0.733776
NA nfa33500 putative sugar dehydrasechromosome CDS3550321 1221 + 0.670762
NA nfa27060 putative glycosyltransferasechromosome CDS2870174 1266 - 0.751185
NA nfa17500 putative glycosyltransferasechromosome CDS1904064 1149 - 0.793734
NA pnf11170 hypothetical proteinpNF1 CDS142761 1137 - 0.729991
NA nfa24370 hypothetical proteinchromosome CDS2601914 741 - 0.727395
NA pnf1630 putative DNA-binding proteinpNF1 CDS72017 849 - 0.685512
NA nfa23960 hypothetical proteinchromosome CDS2558983 1008 - 0.727183
NA nfa56640 putative N-acetylmuramoyl-L-alanine amidasechromosome CDS6008512 1194 + 0.681742
NA nfa55950 putative hydrolasechromosome CDS5934155 651 - 0.697389
NA nfa47630 hypothetical proteinchromosome CDS4975505 714 + 0.739496
NA nfa36470 hypothetical proteinchromosome CDS3860805 1101 - 0.714805
NA nfa32610 putative glycosyltransferasechromosome CDS3460910 1086 + 0.751381
NA nfa37080 putative glycosyltransferasechromosome CDS3922326 1125 - 0.714667
NA nfa16880 putative acetyltransferasechromosome CDS1840019 534 - 0.71161
NA nfa41330 putative peptidasechromosome CDS4280460 597 + 0.765494
NA nfa44870 putative transporterchromosome CDS4650245 849 - 0.689046
NA nfa47200 hypothetical proteinchromosome CDS4931648 870 + 0.709195
NA nfa43580 putative oxidoreductasechromosome CDS4520183 897 - 0.735786
NA nfa48600 hypothetical proteinchromosome CDS5072216 723 - 0.737206
NA nfa6160 putative glycosyltransferasechromosome CDS635489 762 + 0.681102
NA nfa1710 hypothetical proteinchromosome CDS162131 2253 - 0.722592
NA nfa17680 putative cell division proteinchromosome CDS1925412 699 + 0.702432
NA nfa41190 putative proteasechromosome CDS4268309 1200 - 0.704167
NA nfa31990 hypothetical proteinchromosome CDS3398108 4209 + 0.736517
NA nfa49650 putative histidine kinasechromosome CDS5181492 2607 + 0.71308
NA nfa1920 putative arabinosyltransferasechromosome CDS194138 3243 + 0.710453
NA nfa36660 hypothetical proteinchromosome CDS3881929 576 + 0.697917
NA pnf1740 hypothetical proteinpNF1 CDS85135 1398 + 0.643777
NA nfa9570 putative hydrolasechromosome CDS1057286 1125 - 0.704889
NA nfa23060 hypothetical proteinchromosome CDS2479235 1215 - 0.742387
NA nfa30650 hypothetical proteinchromosome CDS3251507 597 + 0.721943
NA nfa38330 hypothetical proteinchromosome CDS4052862 1377 + 0.726943
NA nfa3860 putative penicillin binding proteinchromosome CDS401254 1428 + 0.744398
NA nfa47190 hypothetical proteinchromosome CDS4929989 1455 + 0.75189
NA nfa17210 putative hydrolasechromosome CDS1871622 573 - 0.736475
NA nfa35040 putative 5-dehydro-4-deoxyglucarate dehydratasechromosome CDS3716027 915 - 0.703825
NA nfa9680 hypothetical proteinchromosome CDS1067871 1023 + 0.742913
NA nfa26340 hypothetical proteinchromosome CDS2803046 756 + 0.710317
NA nfa42820 putative glycosyltransferasechromosome CDS4435171 1263 + 0.725257
NA nfa3390 putative penicillin-binding proteinchromosome CDS349637 2373 - 0.69448
NA nfa55490 putative penicillin-binding proteinchromosome CDS5878682 2370 + 0.720253
NA nfa55570 putative penicillin-binding proteinchromosome CDS5887174 2439 + 0.710947
NA nfa20220 putative membrane proteinchromosome CDS2203739 1095 + 0.699543
NA nfa24760 putative ABC transporterchromosome CDS2635814 1635 - 0.729664
NA nfa51750 hypothetical proteinchromosome CDS5473542 1074 - 0.678771
NA nfa41750 hypothetical proteinchromosome CDS4324461 315 - 0.739683
NA nfa32930 putative sugar isomerasechromosome CDS3493079 1200 + 0.699167
NA nfa24130 hypothetical proteinchromosome CDS2576453 1068 + 0.75
NA nfa26860 hypothetical proteinchromosome CDS2852576 1077 + 0.749304
NA nfa17180 putative glycosyltransferasechromosome CDS1868219 1128 - 0.748227
NA nfa34580 putative dehydrogenasechromosome CDS3665327 1287 + 0.738151
NA nfa7160 putative peptidasechromosome CDS740715 759 + 0.747036
NA nfa55290 putative glycosyl hydrolasechromosome CDS5856513 840 + 0.716667
NA nfa32010 hypothetical proteinchromosome CDS3403643 738 - 0.734417
NA pnf1390 hypothetical proteinpNF1 CDS46772 708 - 0.669492
NA pnf1340 putative signal peptidasepNF1 CDS41742 531 + 0.693032
NA nfa32500 putative transporter permeasechromosome CDS3450370 984 - 0.694106
NA nfa1720 hypothetical proteinchromosome CDS164570 1497 + 0.744155
NA nfa29240 hypothetical proteinchromosome CDS3106209 882 + 0.738095
NA nfa23910 putative glycosyltransferasechromosome CDS2554736 963 - 0.775701
NA nfa20820 hypothetical proteinchromosome CDS2253977 1077 + 0.761374
NA nfa18430 putative penicillin-binding proteinchromosome CDS2015255 1749 + 0.730703
NA pnf1380 hypothetical proteinpNF1 CDS45390 1290 - 0.673643
NA nfa19830 putative mannosyltransferasechromosome CDS2154625 1098 - 0.704918
NA pnf250 hypothetical proteinpNF2 CDS3953 696 - 0.655172
NA nfa16530 hypothetical proteinchromosome CDS1802367 549 + 0.752277
NA nfa50600 hypothetical proteinchromosome CDS5316864 1134 - 0.747795
NA nfa2190 putative ABC transporter membrane proteinchromosome CDS230346 885 - 0.651977
NA nfa51280 putative glycosyltransferasechromosome CDS5427914 1143 + 0.741032
NA nfa55430 hypothetical proteinchromosome CDS5872845 972 + 0.75
NA nfa17780 putative UTP-glucose-1-phosphate uridylyltransferasechromosome CDS1936165 897 - 0.710145
NA nfa38030 putative glycosyltransferasechromosome CDS4025558 1173 + 0.734015
NA nfa22310 putative glycosyltransferasechromosome CDS2408612 1506 - 0.780212
NA nfa50660 putative glycosyltransferasechromosome CDS5365173 1404 - 0.733618
NA nfa36580 hypothetical proteinchromosome CDS3872394 1005 + 0.706468
NA nfa37090 putative acyltransferasechromosome CDS3923447 969 - 0.733746
NA nfa19820 putative lipopolysaccharide biosynthesis proteinchromosome CDS2153496 1140 - 0.714035
NA nfa23920 putative sugar kinasechromosome CDS2555689 975 - 0.779487
NA nfa54970 putative penicillin-binding proteinchromosome CDS5827026 1689 - 0.714032
NA nfa820 putative penicillin-binding proteinchromosome CDS64556 1467 - 0.707566
NA nfa2730 putative acyltransferasechromosome CDS280956 933 + 0.744909
NA nfa30790 putative transporterchromosome CDS3264694 969 - 0.686275
NA nfa41160 putative penicillin-binding proteinchromosome CDS4264215 1791 - 0.706309
NA nfa35070 putative glucarate dehydratasechromosome CDS3719493 1347 + 0.729027
NA nfa11930 hypothetical proteinchromosome CDS1320267 897 - 0.724638
NA nfa41760 putative glycosyltransferasechromosome CDS4325140 1131 + 0.707339
NA nfa24110 hypothetical proteinchromosome CDS2574520 1521 - 0.74096
NA nfa6110 hypothetical proteinchromosome CDS632072 636 + 0.65566
NA nfa39790 hypothetical proteinchromosome CDS4163382 360 - 0.641667
NA nfa23950 putative glycosyltransferasechromosome CDS2557868 1119 - 0.764969
NA nfa31090 putative glycosyltransferasechromosome CDS3292704 990 + 0.736364
NA nfa9010 hypothetical proteinchromosome CDS1002992 639 - 0.71518
NA nfa9380 putative penicillin-binding proteinchromosome CDS1040348 1305 - 0.734866
NA nfa47250 putative glycosyltransferasechromosome CDS4935819 1239 - 0.732042
NA nfa54750 putative glycosyltransferasechromosome CDS5798640 1176 - 0.742347
NA nfa48110 putative esterasechromosome CDS5025761 612 + 0.710784
alr nfa8790 putative alanine racemasechromosome CDS980992 1146 + 0.727749
dapA nfa38690 putative dihydrodipicolinate synthasechromosome CDS4084572 909 - 0.688669
dapA2 nfa26720 putative dihydrodipicolinate synthasechromosome CDS2840096 921 + 0.737242
ddlA nfa42050 putative D-alanine-D-alanine ligasechromosome CDS4354408 1092 - 0.701465
galE nfa37800 putative UDP-galactose 4-epimerasechromosome CDS3999031 981 + 0.707441
galU nfa49530 putative UTP-glucose-1-phosphate uridylyltransferasechromosome CDS5171572 897 - 0.696767
gidB nfa56680 putative glucose inhibited division protein Bchromosome CDS6017059 783 - 0.725415
glf nfa1760 putative UDP-galactopyranose mutasechromosome CDS168440 1230 + 0.652032
glmS nfa8760 putative L-glutamine-D-fructose-6-phosphate amidotransferasechromosome CDS976813 1881 + 0.703881
glmU nfa48780 putative UDP-N-acetylglucosamine pyrophosphorylasechromosome CDS5092489 1488 + 0.706989
inv nfa34810 putative invasinchromosome CDS3690506 1428 - 0.731092
lepA nfa13990 putative GTP-binding elongation factorchromosome CDS1570775 1851 + 0.666667
lgt nfa18630 putative prolipoprotein diacyleglyceryl transferasechromosome CDS2033782 1476 + 0.713415
lspA nfa17880 putative signal peptidasechromosome CDS1949695 723 - 0.706777
lytB nfa47950 putative isoprenoid biosynthesis proteinchromosome CDS5007355 1011 - 0.706231
mraY nfa17630 putativephospho-N-acetylmuramoyl-pentapeptide-transferasechromosome CDS1918674 1077 + 0.675952
mscL nfa49570 putative mechanosensitive channelchromosome CDS5174433 408 + 0.615196
murA nfa10690 putative UDP-N-acetylglucosamine 1-carboxyvinyltransferasechromosome CDS1177754 1281 + 0.710383
murB nfa51970 putative UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS5494794 1149 - 0.743255
murC nfa17670 putative UDP-N-acetylmuramoyl-L-alanine ligasechromosome CDS1923910 1506 + 0.735724
murD nfa17640 putative UDP-N-acetylmuramoylalanine-D-glutamate ligasechromosome CDS1919747 1494 + 0.738286
murE nfa17610 putativeUDP-N-acetylmuramoylalanyl-D-glutamate-2 ,6-diaminopimelateligasechromosome CDS1915398 1611 + 0.757294
murF nfa17620 putativeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate- D-alanyl-D-alanine ligasechromosome CDS1917178 1500 + 0.743333
murG nfa17660 putativeUDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferasechromosome CDS1922777 1137 + 0.734389
murI nfa50700 putative glutamate racemasechromosome CDS5369457 762 - 0.746719
ppmB nfa31180 putative polyprenol phosphate mannosyl transferase 2chromosome CDS3313404 1674 - 0.735364
rfbA nfa2070 putative glucose-1-phosphate thymidyltransferasechromosome CDS216499 873 - 0.672394
rfbB nfa2100 putative dTDP-glucose-4,6-dehydratasechromosome CDS219808 1023 + 0.681329
rfbC nfa2060 putative dTDP-6-deoxy-4-ketoglucose epimerasechromosome CDS215949 549 - 0.690346
rfbD nfa46380 putative dTDP-4-dehydrorhamnose reductasechromosome CDS4827409 858 - 0.75641
rfe nfa10570 putative undecaprenylphosphate alpha-N-acetylglucosaminyltransferasechromosome CDS1167276 1176 + 0.690476
ugd nfa54240 putative UDP-glucose 6-dehydrogenasechromosome CDS5740095 1323 + 0.701436