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# Dehalococcoides sp. CBDB1, CBDB1

>cbdbA1663 mechanosensitive ion channel family protein
MLIEFTFDSLVMAAIVAAIALVLFFLVNKLFSRYIRKDEEGKKVSLLRKA
LKAVRLPVLLVIWCIALYIIFENLTIQVDLSKQISKALELLMAALTLWIG
AGLIEGLLSWLKTEIPGKANSQVNDHIIDSLRFVVPLLAVLTLVVAGIGI
YGVAADGLTVWLGTHGVKLLLIIGLIIAGVYAVSRGVPALIRGIIYGGVA
KPKEEAKKRADTLIGVAVSTAEVVVVAMGAFVALSEVGLDIGPILAGVGV
LGVAIGFGAQSLVKDYLSGLFIILENQYSVGDVIKVMDVVGEVEFIDLRR
TIVRDLDGVVHVVSNGEIRITSNYTKYLSRVNFDISIGYQEDINHAIDVI
NKVCAEFTSEPEWNKSVVKNSLGVLRVNKLGDSGVDIKVLGDVKPGTQWA
IKGELRKRIKIAFDREHIEIPWPHTKVFFGNALPGSKMQIAKVSGEELPE
AESEPESE
>cbdbA1241 fasciclin domain protein
MLDLVDTAFGNINLSILCKAVTQTGLIGTLRGGPFTILAPDNDAFAKMPD
GMLDYLMENESELKSILLYHLIPGRHTVEELTKLYSTNTALDKPVEIQVS
GKMLALNTSHVVTKNLEATNGLIHVIDKVLLPPK
>cbdbA1667 putative dihydroflavonol 4-reductase
MKVLVSGASGRIGNVLVRELLKSGYGVRALVKPGDTALSIQGLDIERVEG
DVTVYPSVLDGLKGCEAVFHLAGIVSLIPGREKELYETNIKGAANMADAC
LECGITRLLYTSSIHALSEPPPGTAFTEEEGYHPSDFPPGYNRSMAQGAL
EVLKRFSAGLSGVIVCPSGVIGPYDYDPSEMGRVVVDYARGKMSAYVDGG
YDFVDVRDVAIGMISAFEKGQDGQSYILSGQYVSIKSLFEILGRLSGLTP
PRLRVPYILAKLGAYISYPYYRLTHSAPLFTAYSLDVLRSNSNISSAKAR
CELGFSPRLAEESLADAYLWFKSKGYLSD
>cbdbA212 probable glycosyltransferase
MIKICLIGDFKVCPDRSIYKMAAQLADFLSKEKDILLLLCPREHFTRPRS
LNRIRRFQPDIIHLLGKPDAAELFRLKMAKLSAPRAKTVISAQQPVNTRT
VRNMLPYIKPDMAICLSQKSASFFREAGIETVILPNGVDMATFQPVSPEI
KAELRRRYCLPHNKLLLLHVGPIRAGRGVDLLRRMQNPDTQVIMAVSNPG
IFNRTLLENLRKSGCMILTSFRPNIADLYALADAYVYPMLLEEDANHQIF
SSEMPLSVLEAMSANLPVITTPFGALPEVFPAGEGLYYAHDDFEFLKAFQ
AYTQNPPANTRHKVATCAWPLIITSLKELYTKLLA
>cbdbA183 hypothetical protein, fragment
MGAFSINGTSLVTSSTGTSLGSTKYYPYGATRSGSVPTDEKFTGQKLDDT
GLYYYNARYYDPTIGRFISPDTLVQNIHNPQCLNRYSYVLNNPLKYIDPS
GHRMVIPGNPPQNGIPFPGPEGPGGSSGNGDSGDSGTILLPPIDNSTGGS
SAPRLSTYDAVVGTLEVVGGWFCCIVGGVIIAAAGTIPIPIALPVGIDLI
VVGIGSISDGLGRFGFDFYIPNPFGGP
>cbdbA500 glucose-1-phosphate thymidylyltransferase
MKQAVILAAGEGQRLRPFTASKSKVMLSIAGKPLLEYVIESLAQNGIRDI
ILVVGYKRERIFDYLGQGGRFGVQISYVQQPNQLGTAHALRQVKDKIKGD
FLVLNGDQLIKPSTIREFVKQPPQAVMVKAINGEDPSRYGVVTSSGGLLT
SIEEKPSIAKSNFINTGIYSFSRAVFDYIGEHLDMPVVLQSMLKDGLDIH
VAESQGAWLDIVYPWDMLKLNAVVSAELKPGVAGTIESGVVMKGPVRIGK
NTVIRSNSYIVGPVIIGEGCDIGPSVCIYPSTSIADNVTVAPFSQIKNSL
IYSGNSIGVASVIEDSVIDRGCVICGQFSAPSAEIETRINDGLHKIKVGT
MMGEGCTVGNAVVLQSGTVVGNSTRIAPLRTLSGNIPDGSLVV
>cbdbA1269 conserved hypothetical protein
MTNRVFVTGGSGFVGRHLLPRLAENGFKIRLLVMNETEANRVKTPGVEFV
YGTVNDLPVLMDSLKDVFAIIHLVAILRENKNATFAEVNIEGTKNILAAA
TENGVKRFIHMGILGASADPRFTYLHSKYLAEEAVRHSGLGYSILKPSVM
FGPGAGFINALIRSFKPYPFIAPVAGNGKTRLQPIWVEDVVSCLLKMLEG
EKIHQSVQIGGPQIFTYDQVLSAVMQAMRIKKPRLHVPVGLMRPLVWLME
RASSNPPITMPELKALSVDNITVEDAVKREFGFDPKPLSEGLDYLKPAPA
VP
>cbdbA1668 hypothetical protein
MRVLVVGGTGFLGYHAVLELIRRGHQVSVIALPPMPSDHIFPPSVEVFLS
NIHNLNHGMLLAMLKGQDAVVYAAGADDRVVPKAPAYLYFHKANVEDCLH
FFSIAKEAGVKRGVFLGSYFCHFAKLWPELHLAEHHPYIESRLEQEEALF
KLGGNEMAICGLRLPYIFGSMPGRTPIWKPLIKYLNSGWWLFYPRGGTNC
VSAVRVGEAIAGAVEKGQAGHSYLVGDENLSWDALLSKFGVILGKPKKVL
HLPAFILRLAALGLKSIHRLQGRESGLDPVSYITLQTRNTFFDPTLSRKA
LGYGQGGLDIALKDTVDACLEIPRKEAG
>cbdbA734 hypothetical membrane protein
MANKKAKQSESNQLQTFKKLRVYNLVMGSFHLAQSILILFLSNNFSLPVT
TNFIGGGPGGITFKPPEMLFDLPIGPMVAIFLLLSAIAHFLLSSPGVFEW
YKTNLSKGINYARWYEYALSSSIMIVLIAMLSGIYDVATLIAIFGANAAM
NLFGLMMELHNQTTPKTNWLSYTFGCFAGFMPWVAISIYFFGAISQASDN
IPTFVYFILPTLFIFFFSFALNMWLQYKKVGKWRDYLFGERVYIFLSLTA
KTALAWQVFGGALAGGS
>cbdbA942 glycosyl transferase, group 1 family protein
MKIALVCPYDFAYPGGVVNHVNSLYKELKMLGHDVRIIAPASKSLVEYGT
DFIQVGKPRPLATSGTVVRISLSVNLKNRIKKVLAEEKFDVIHLHEPFMI
MLCSAMLRFSKTCNVATFHASQGKPGYNLGWPFTRIFLRRRRRNLHGHMA
VSNAALRFASKYIPGEYTIVPNGIDLDLYHTEVQPFSEYIDDKLNILFVG
RMESRKGLGYLIDAYAQIKPLCPQTRLLIVGPGTPRQISHYRNMVKKHGL
SDVVFVGGVSCHDLPRYYKTAHIYCSPATGQESFGIVLLEAMALGVPIVA
SRIEGYQCVLTDNKEGLFVPPKNADELAKTLIKLITHPDMRSELSAEGLK
TVQQYSWKMVAKKVEEYYHLVLSKNHHGPEGK
>cbdbA1125 nucleotidyl transferase family protein
MKAIILVGGQGTRLRPLSINTPKSMVPVLNVPFLSHVLRHLSSYGIKDII
LTQGHLAAPIEQYFGNGQSLGVNLVYSVEHEALGTAGAIKNAERFLDDTF
FTLNGDIFTHLDLDAMLQSHRDRKALVSIALTPVDDPTKYGLVETTPDGR
VSRFLEKPSPSQITTNMINAGTYLIEPEVLKYIPEDENHSFERQLFPRLL
NECQAVYAYPSSAYWIDIGSPEKYSQLNRDLLCGEGGDFGFSRGNEIIIG
RGCQLHPTAQISGPVLVGENCVIGANARITGPVVIGAECRIEDEATLTES
VIWRNVTIGTECKVVSSIIANHCHLKAGGKYENVVLGDNVTAECGCAPEP
GSKVCPGILMI
>cbdbA963 glycosyl transferase, group 1 family protein
MAKKKLNIALVSLHSCPLGQPGGRDTGGMNVYICELARSLGNSGYQVDIY
TRAHDPRDDVWEFLAPNVRLIHIQAGPVEDMGKLAQYEHLESFVCGLEAF
RKAEGIKYDLIHSHYWLSARAGLALSKLWEVPHLVMFHTLGKVKNRLMQA
QVDPQLRLDAEQNIVHETDLIIAATQNEKNDLISLYQAEPDKIRVIPCGV
NTRLFSITDRAEAEAELGLSAAPKALFVGRLEKLKGLDNLLKAVSLIEAD
MELLVVGGDEYSQGERNRLEKVAEELAISDKVKFYGSVKQDVLAKYYNAA
KVCIIPSYYESFGMVILEAMACGTPVISGRVGVAPDIIRPGINGCLIPGN
QPEQLAVCLKEWLYQKIANHKAIRKIAEEYTWQSVSAQIESVYYGILDPE
TAGVA
>cbdbA472 SIS domain protein
MDIINLDDLNMYEKLDPHHMLDELKRMPLLCKQSWETAEALSLPEDYRTI
KQVVILGMGTSGVGAQLAERIVRDECKIPIYLHQDYLLPAYVSADTLVIA
SSSSGSTEEVVSCFNQALNRHAKLLVLTTGGQLKEMATAHNIPGLIYDYT
YRPSTAIAYGVLPILSILHQLGFIPNKSAEVSESLIVLSQIAERLSEKHQ
TTNNSAKQLAGKLEGRAVMAFGSGVTFPAARRFKTQLNENAKCFSFAEEI
PEMNHNSVVGYELPRSSGRYWAAVMFKTTYLSKRIHQRMRITTDMLHLAK
IPVFSIDGYGFSPLCQTLSLILQGDFVSLYLAFLTGVDPYPIDAVDYFKR
KLAES
>cbdbA313 putative membrane-associated zinc metalloprotease
MLLTVVSFLIIFSIVVISHELGHFFTAKAIGVKVEEFGFGYPPRIFGRKF
GQTEYTLNWLPLGGFVKVEDDPVNNKGLSSKSAGKRLLFFSSGALVNAIL
PIILFAFALIVPHDVLVGRVNVEEVVPNSPAAEAGLVTGDTILSINGQEI
RNTAEFSRASQLNLGQSIEITVLHADQTQSIVSLTPRWQPPAGEGPVGIS
LQTLDYQITSESESVLKAIPLSVKQNFETLVLFKNSILGLIMGSVPFDVV
GPVGLAQMTGDVARAGVGPLLEFTAFLSLNLAIINLLPLPALDGGRIFFV
FIEWIRGGRRISPKVENLIHMIGFFLLIGLMLTVTFQDIIRIAGN
>cbdbA1244 conserved hypothetical protein
MDNKTKLKLCLLANASDESNLKWANSFARRGHEVHIFSYDQIKDGIELAK
GIKFHHLVFPVKYPFTYLTFFQAQISLMLLKPDIIHAINMSDYGILAGLV
CRIGRLNPITLTAVGNDILHDSHTAHGWAIKHVLPLSKVVTCDTDEIALD
MVKLGMKEDHIFLMSRSGELDLSRLEATYLAMRKTRS
>cbdbA935 dapA, dihydrodipicolinate synthase
MKELGRLITAMVTPFKTDGTVDYAQAQKLALGLLDSGSDGLVVVGTTGES
PTVTWEEEHALFAAVKSAVGNRGKVIAGTGANSTQEALENTLKAEKIGVD
ACLLVVPYYNKPTQEGLYLHFKTIAEATKLPCILYNVPSRTITHMNPETV
IRLSQIPNIVGIKEASGKLDDIAQIINNVRPDFTVWSGNDSDTLPMLAMG
SYGVISVASHLVGNQIKDMITSFVSGNTEHAAAIHRHLTPLIRSLFVVSN
PIPIKYALNYLGFEVGGLRLPMTEADEKTAALIRESLRGYTIDLPIK
>cbdbA616 ddl, D-ala D-alanine ligase
MRIGLSYDLKLALTPVTGGPDDALEEYDSPETVEAITNSLTAAGHAVYRL
GGGKEFLRKVQEQKLDLVFNISEGLGNYRSREAQIPGVLEMLDIPYTGSD
PQTLAICLDKPLTKKLVAGAGVKTAKWQLVSNCEELSTIDWSDFPLPAFL
KPACEGSSKGVRFASRAESTDEIMRMATELLTTYNQPVLVEEFINGDEIT
VGVIGNDKPKVLGIMRIVPKTKADYFVYSIEIKRNWRQMVEYEVPAALPA
KTLARIEKATLDAYRVLECHDLCRMDFRVSPDGTPYFLEVNPLPGLNPVS
GDLPIMASKLGISHADLVLEILNTAIARHNLVAADCLA
>cbdbA750 gidB, methyltransferase GidB
MNELVYGLSALGISLNSVQLGQFETYYQELVDYNSRINLTAITEYKDVQI
KHFLDSVSLVLAGIKGDEKLLDVGSGAGFPGLPLKILFPAIQLGLLEATQ
KKARFLSEITVKLGLSGVEIISQRAEDTAQNPLYRQKYSLVTSRAVADMA
TLAELTLPFCAVGGRVIAPKKGDIEEEMDRAATAVKKMGGRVFKVIKVEL
PGLEDGRKLVLLEKISNTPALYPRRAGIPAKTPLI
>cbdbA503 glmS, glucosamine-fructose-6-phosphateaminotransferase ,isomerizing
MCGIVGYTGKRQAQGVLYDCLCRLEYRGYDSCGIAVNTPEVQVFKDAGKV
HDILQNAPLFKGTAGLGHTRWATCGEPTQINAHPHTDCTGKICLVHNGVI
NNYSQLLKRLEGNGHKIVSDTDTELIAHLIEEYDKGDLEEAVRLAVKEIE
GSYALVVMRSGENTLVVVRQDSPLVIGVGDGEYLVASDVPAILGYTNRVI
YLDEGDIGTISPDSLKIRRNGGYIVPLVEKVNWTQDESQKAGYSHYMLKE
IHEQPRVIQNTLINMPLPESFNKSEILEQSRKTGILFLACGSSYHAALTA
RYLVEEHLNIPVRLEIASEFNYMHRLLPCKLAVVLTQSGETADVLRAMRR
LKQAGCMVVAITNVAGSTAARLADHTIYTQAGPEIGVAATKSFIAQLIVL
YALCFAGASAANIRYQDYLSTMRLLPSVVQSILGSHQNIKDAAVEVAKSK
SAFFIGRGINYPIALEGALKLKEISYIHAEGYAAGELKHGPFALLSPETP
VLALVSRDQTYEAMLTGLREIKVRRAPLIVIGEAGDEQLGQLADRVISLP
SFNRLFNPILFTVVLQLLAYYVALELGCSIDTPRNLAKSVTVE
>cbdbA1294 ispH, hydroxymethylbutenyl pyrophosphate reductase
MKVECASNIGFCFGVRRAINILEKTASERGGVETLGALVHNQQVLNRLSG
MGVRVVKNIDDISGRTVAISSHGVGPAVLAELKSKGLEIVDTTCPFVKRA
QVAAKRFHDAGFFTVIYGDVNHPEVKGILGWAGGNGLATLNPQGLDDIPD
LSRYIGVLSQTTQIPTGFTSFVKNVIDQALVKDAEIRIADTLCHDIRDRQ
AAALELAGRVDLMLVIGGHNSANTRHLLDLCKTVSNTHLIETASELQTDW
LKGVSRIGITSGASTDETTISEVCSYLDRLSAGA
>cbdbA841 lepA, GTP-binding protein LepA
MSQSSVRNFCIIAHIDHGKSTLADRLIEMTGTLRHDEMCEQVMDSMELER
ERGITIKAKAIRLRYISKDKQEYRLNLIDTPGHVDFSYEVSRTIAACEGA
ILVIDATQGIQAQTLANVYLAIEYNLEIIPVINKIDLPGADIPRVMGEIK
SVLGYDEDSVLQISAKLGLGVPELLEAIVNKVPAPKGNANQPLRALIFDS
HYDPYKGVVAYLRVADGNINKGDDLRLMGQGTEFRVLEAGYFAPAQVAAL
RLDVGDVGYIATGLKSVGECRVGDTVTLQHGGAIQPLIGYHPAKAMVFAG
IYPTQTDDYHELREAMEKLSLNDASLSSEPESSPLLGHGFRCGFLGLLHL
DIIVERLEREFNLSLVVTSPGVSLTVTRIGGEAFTVVNPNEMPLPHEIAR
IEEPWVSVVIITPSKYIGTVMDLVRENYGVYKNTEYLGQLAMSELGQRVQ
LHYDMPLRSILTTFHDQLKSRTQGYASLDYEFIGYRDANLSKIDVLVNDV
PVDAFSRIIPPDKAHEIGEALVKKLKEMIPRQLYQVTLQAAIGSKIVARA
DISAKRKDVIAKCYGGDITRKRKLLDKQKEGKKKMRQIGKVEVPKEAFLS
VLKLQ
>cbdbA926 lgt, prolipoprotein diacylglyceryl transferase
MFEINVDPVAFSIGSLVVKWYGIMMALGVVALVSWIFWRIKRGANISYDT
VLTAAIIAIPSGIVFAKLLHVIDAWEYYSLNPGAIFSGEGLTIFGAIIGA
TIGLWIYSRYSHFNLGYLLDVAVPGILLGQAIGRVGCLLNGCCYGEFGGT
GCSVIYTNPATAAPYGVEVAPTQAYEIIFLLCLLTFSLFIAKKLRPDGQL
FLLYISLYAAWRVAIGFVRVNDDFALGLEQAQVVGLILMAVAVPLFIYRL
RKQKQTDKIT
>cbdbA1327 lspA, lipoprotein signal peptidase
MTRGLVFFVSTACGILADQLSKFIITANLATGTSIPESGFFQIVHVHNTG
AAFSIFRGHIEWLIAASVLGVILAMTAFFIRKKLPFLDTRPGLIALGVIL
AGTVGNLIDRVRLGYVTDFIRVGDFPTFNIADSCLTVGVIGLLLLYIVSS
HVSGDTSENV
>cbdbA281 mraW, S-adenosyl-methyltransferase MraW
MIEYPHIPVMLEESIQGLGVIPGGRYVDCTLGAGGHSEAILEHSYPGGQL
LSIDADPSAITLAAERLKSFGSSVLLVNDNFANLKDICQRYEYMPVHGIL
FDLGLSSMQLDRQESGFSFQTEAPLDMRFSPEQELTAADIINGYDVTELS
DLIWKYGEEPFSRRIARAIAEKRPFKTTTELAAAIERAVGGRHGRIHPAT
RTFQALRIAVNEELSHLESALSQAHSLLGHGGRLVVISYHSLEDRIVKQY
FQKEAKGCICPDDIPQCVCDHQPSLRIINRRVITPSDEEISRNPRSRSAK
MRVAERIIEPGEGRFFSSREDELVNHVSRTGSVQHGQAKHKGVVQRGGS
>cbdbA1343 mscL, large conductance mechanosensitive channel
MFKEFKIFIMRGNVVDLAVGIVIGAAFGAIVNSLVKDVLMPPIGLLLGNV
DFGNLFIVLKEGAIGGPYESLLVAQTAGAVTINYGVFINALINFLILAMA
IFFFVVRPLNQLAARQKSKEAVIPAQTDKKDCPYCDTQIPLKASKCPYCT
SELM
>cbdbA305 prc, carboxyl-terminal protease
MTFRIKVLLGTILSMVGLLGSFALGYFSGGVSALNSDENLSSIVTAWQII
TTEYVEPDIIDQAALAEAAIKGMMDELNDPHSVYLNAEDYQASLEYDDGQ
YVGIGATVQIEDGVITLIPYEGSPAALAGIQAGDILLEVDGQSVDGFSLA
DLSPLVRGEKGTLITLKVERSTSAQPLLFNVTRNEILIPSVSSEMMGDIA
YIRLSRFSERTDAELEQVLKNLGDAKGIVLDLRGNPGGLVSSVINVTSRF
VSSGVVLTTVDNAGNSEEYKIVPKAVTTSLPMVVLVDQYSASGSEALSGA
LQDYGRATIVGKTTYGKGSVNRTFDVTGNTGIYLTIGRWYTPNGRMIEGQ
GITPDIELELAGDEAVNWALNFMHGEA
>cbdbA499 rfbA, glucose-1-phosphate thymidylyltransferase
MKAVILAAGEGSRMRPLTFTRPKVMLPIAGKPILEHLLMEVSAAGIKEFV
LVVGYRDEQVRSYFADGAKWGVKISYCQQTRQLGTAHALKQLENQLEGNF
LVMNGDILAESADISALAAGSETTLSVLEVSDPSSLGVLETDGDRVRCIH
EKSANPPANLANAGLYLFTPRIFKAISDTPLSPRGEYEITSSIQLLIDNG
TEVGYRRLVYWQDVSYPWDLLDVNASMLKNLAPCVYGTVEENVVIKGTVE
IGEGSLVRSGAYIEGPVLIGKNCDIGPNCYIRPSTSIGDNCRVGASVEIK
NSIIMDNTKIPHLNYVGDSVIGQNCNLGAGTKLANLRFDGADIIAGGVNT
RRRKLGAVLGDGVETGINVSLNPGVLIGSGSRIGPGAVVSGLVEPNSYIG