TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-04 09:06:46

Gene list

Applied filters:

COG category: Cell wall/membrane biogenesis
Organism: Idiomarina loihiensis L2TR, L2TR

Number of genes found: 157

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Idiomarina loihiensis L2TR, L2TR
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA IL2187 Uncharacterized conserved proteinchromosome CDS2336581 1434 - 0.479777
NA IL0123 UDP-glucose 4-epimerasechromosome CDS135661 1008 + 0.46627
NA IL0916 Carboxyl-terminal proteasechromosome CDS967572 1344 + 0.473214
NA IL0633 Lipoprotein signal peptidasechromosome CDS689909 513 + 0.499025
NA IL2489 Outer membrane phospholipase Achromosome CDS2667746 1032 + 0.468023
NA IL2115 Periplasmic protein TonBchromosome CDS2252422 609 - 0.538588
NA IL2403 HlyD family secretion proteinchromosome CDS2576853 1056 + 0.475379
NA IL0565 Polysaccharide biosynthesis/export proteinchromosome CDS596038 2763 + 0.489685
NA IL2210 Putative salt-induced outer membrane proteinchromosome CDS2362634 723 - 0.457815
NA IL0132 Glycosyltransferasechromosome CDS141487 741 + 0.464238
NA IL0564 Nucleoside-diphosphate-sugar epimerasechromosome CDS594860 1056 + 0.469697
NA IL0558 Glycosyltransferasechromosome CDS589135 1122 + 0.390374
NA IL0587 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding proteinchromosome CDS627196 1368 + 0.489766
NA IL0280 Uncharacterized conserved proteinchromosome CDS294690 780 + 0.503846
NA IL2057 Membrane-fusion protein homologchromosome CDS2193388 1269 + 0.527975
NA IL1456 D-alanyl-D-alanine carboxypeptidasechromosome CDS1569314 705 + 0.487943
NA IL0557 Glycosyltransferasechromosome CDS587814 813 + 0.354244
NA IL1633 Membrane-fusion protein, RND family efflux system componentchromosome CDS1746737 903 - 0.445183
NA IL0568 Fusion of WbfC-and WbfB-like uncharacterized domains involved in polysaccharide synthesischromosome CDS600117 2868 + 0.490237
NA IL0703 Glycosyltransferasechromosome CDS760448 1044 - 0.444444
NA IL1824 Membrane-bound lytic murein transglycosylasechromosome CDS1957284 1038 - 0.500963
NA IL0563 Sugar transferasechromosome CDS594312 552 + 0.443841
NA IL0550 UDP-N-acetylglucosamine 2-epimerasechromosome CDS580778 1164 + 0.426117
NA IL0463 Probable Co/Zn/Cd efflux system membrane fusion proteinchromosome CDS481139 1242 + 0.514493
NA IL2602 Secreted metallopeptidase, family M23/M37chromosome CDS2798135 807 + 0.448575
NA IL1257 Peptidase, M23/M37 familychromosome CDS1346783 822 + 0.486618
NA IL2113 Outer membrane protein (porin)chromosome CDS2250047 972 - 0.438272
NA IL1224 Outer membrane efflux proteinchromosome CDS1317310 1272 - 0.453616
NA IL0786 Phosphinothricin N-acetyltransferase, putativechromosome CDS843625 501 - 0.409182
NA IL1223 Membrane-fusion protein, RND-like efflux system componentchromosome CDS1315779 1530 - 0.447712
NA IL1764 Lipoprotein A family proteinchromosome CDS1897923 408 - 0.433824
NA IL2305 HlyD family secretion proteinchromosome CDS2471881 1056 - 0.460227
NA IL1635 Lipoprotein signal peptidasechromosome CDS1749330 504 - 0.434524
NA IL1241 Lipoprotein signal peptidasechromosome CDS1333925 513 - 0.504873
NA IL2570 Small-conductance mechanosensitive channelchromosome CDS2761399 1236 + 0.436893
NA IL1634 Outer membrane efflux proteinchromosome CDS1747636 1248 - 0.46875
NA IL0088 Alkaline phosphatase superfamily proteinchromosome CDS92429 1971 - 0.42618
NA IL1887 Predicted outer membrane proteinchromosome CDS2018281 1728 + 0.461227
NA IL0165 Outer membrane protein OmpW, putativechromosome CDS175804 699 + 0.443491
NA IL0466 RND efflux system membrane fusion proteinchromosome CDS486765 1068 + 0.503745
NA IL0551 Sialic acid synthasechromosome CDS581947 1074 + 0.426443
NA IL1639 Membrane-fusion protein, RND family efflux system componentchromosome CDS1753063 1146 + 0.485166
NA IL0554 CMP-N-acetylneuraminic acid synthetasechromosome CDS584704 711 + 0.400844
NA IL0569 Membrane-associated enzyme of epimerase/dehydratase family, wbfY-like proteinchromosome CDS603028 1905 + 0.523885
NA IL1855 TonB-like periplasmic proteinchromosome CDS1986261 612 - 0.529412
NA IL2237 Peptidase, M23/M37 familychromosome CDS2392644 1377 + 0.464052
NA IL1073 Capsular polyglutamate biosynthesis secreted protein CapB, ATP-dependent mur ligase familychromosome CDS1154473 843 + 0.476868
NA IL1459 Uncharacterized lipoproteinchromosome CDS1570892 1089 - 0.466483
NA IL1518 ABC-type transport system, involved in lipoprotein release, permease componentchromosome CDS1628717 1230 - 0.47561
NA IL0428 Predicted S-adenosylmethionine-dependent methyltransferasechromosome CDS441854 948 + 0.520042
NA IL1417 Outer membrane protein, porin familychromosome CDS1524550 609 + 0.438424
NA IL0444 Membrane proteinchromosome CDS459615 933 + 0.453376
NA IL1383 Cyclopropane-fatty-acyl-phospholipid synthasechromosome CDS1487057 1239 - 0.458434
NA IL0837 Bacterial surface antigenchromosome CDS892603 2502 - 0.43725
NA IL0548 Predicted nucleoside-diphosphate sugar epimeraseschromosome CDS578422 1191 + 0.389589
NA IL2542 Small-conductance mechanosensitive channelchromosome CDS2725441 825 - 0.484848
NA IL0549 Predicted pyridoxal phosphate-dependent enzymechromosome CDS579625 1143 + 0.431321
NA IL1778 Aspartate racemasechromosome CDS1914072 690 + 0.491304
NA IL2175 Small-conductance mechanosensitive channelchromosome CDS2320003 1272 + 0.481132
NA IL0120 Membrane-associated proteinchromosome CDS131416 2220 + 0.468018
NA IL0601 RND family efflux system membrane fusion proteinchromosome CDS646727 1044 + 0.47318
NA IL0062 Membrane fusion-like proteinchromosome CDS63597 1041 + 0.490874
NA IL0838 Predicted membrane-associated Zn-dependent proteasechromosome CDS895136 1356 - 0.457227
NA IL0539 Chain length determinant proteinchromosome CDS569231 1011 + 0.4273
NA IL1540 OmpA-like membrane proteinchromosome CDS1658704 519 - 0.454721
NA IL0562 Nucleoside-diphosphate-sugar epimerasechromosome CDS593363 927 + 0.407767
NA IL1418 Choline-glycine betaine transporterchromosome CDS1525379 1695 + 0.469027
NA IL2492 Predicted nucleoside-diphosphate-sugar epimerasechromosome CDS2671736 657 - 0.502283
NA IL1294 Membrane-fusion protein homologchromosome CDS1389578 1080 + 0.460185
NA IL1638 Outer membrane protein, probably efflux familychromosome CDS1751809 1251 + 0.494804
NA IL2227 Nucleoside-diphosphate-sugar pyrophosphorylasechromosome CDS2380729 678 - 0.480826
NA IL0089 Diacylglycerol kinasechromosome CDS94523 360 + 0.472222
NA IL1684 Membrane-fusion proteinchromosome CDS1805986 1230 - 0.492683
NA IL2015 Small-conductance mechanosensitive channelchromosome CDS2158990 819 - 0.459096
NA IL1516 ABC-type transport system, involved in lipoprotein release, permease componentchromosome CDS1626803 1236 - 0.490291
acrA IL0701 Probable acriflavine resistance protein A, RND family efflux system componentchromosome CDS756115 1155 + 0.451082
aefA IL0621 Small-conductance mechanosensitive channelchromosome CDS677654 888 - 0.469595
amiB IL0330 N-acetylmuramoyl-L-alanine amidasechromosome CDS338725 1311 + 0.481312
betT IL2388 Choline-glycine betaine transporterchromosome CDS2559676 2043 + 0.467939
blc IL1990 Outer membrane lipoproteinchromosome CDS2123476 537 + 0.459963
capB IL2400 Capsular polyglutamate biosynthesis secreted protein CapB, ATP-dependent mur ligase familychromosome CDS2573798 1206 + 0.485904
cfa IL2166 Cyclopropane fatty acyl phospholipid synthasechromosome CDS2307478 1116 + 0.486559
csgG IL0156 CsgGchromosome CDS165209 756 - 0.469577
czcB IL0778 Co/Zn/Cd efflux system componentchromosome CDS836171 906 - 0.481236
czcC IL0779 Co/Zn/Cd efflux system componentchromosome CDS837073 1248 - 0.494391
dacA IL0957 D-alanyl-D-alanine carboxypeptidasechromosome CDS1011522 1158 + 0.431779
dadX IL0040 Alanine racemasechromosome CDS43258 1092 + 0.528388
dapA IL1460 Dihydrodipicolinate synthasechromosome CDS1571980 891 - 0.450056
ddg IL1958 Lipid A biosynthesis lauroyl acyltransferasechromosome CDS2086118 942 + 0.493631
ddlB IL0438 D-alanine-D-alanine ligase Bchromosome CDS453925 930 + 0.515054
dgkA IL1651 Diacylglycerol kinasechromosome CDS1766177 363 - 0.46832
dniR IL1698 Soluble lytic murein transglycosylasechromosome CDS1824927 1635 + 0.469725
flgJ IL1139 Flagellum-specific muramidasechromosome CDS1220474 978 - 0.519427
ftsI IL0430 Cell division protein FtsIchromosome CDS443102 1734 + 0.502883
ftsQ IL0439 Cell division septal proteinchromosome CDS454857 747 + 0.491299
galE IL0559 UDP-glucose 4-epimerasechromosome CDS590345 1011 + 0.365974
galU IL1094 UDP-glucose pyrophosphorylasechromosome CDS1178896 885 - 0.482486
gidB IL2629 Predicted S-adenosylmethionine-dependent methyltransferasechromosome CDS2828839 621 - 0.454106
glmS IL2616 Glucosamine-fructose-6-phosphateaminotransferasechromosome CDS2816695 1833 - 0.495363
glmU IL2617 N-acetylglucosamine-1-phosphateuridyltransferasechromosome CDS2818531 1371 - 0.491612
hemM IL0927 Outer membrane lipoprotein involved in outer membrane biogenesischromosome CDS980953 627 + 0.472089
hlpA IL0836 Outer membrane proteinchromosome CDS892040 516 - 0.434109
imp IL2229 Organic solvent tolerance protein OstAchromosome CDS2382545 2274 + 0.486368
kdsA IL0920 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthasechromosome CDS973589 843 - 0.481613
kdsB IL1510 CMP-2-keto-3-deoxyoctulosonic acid synthetasechromosome CDS1620228 762 - 0.503937
lepA IL0812 Membrane GTPase LepAchromosome CDS868809 1812 - 0.476269
lgt IL0506 Prolipoprotein diacylglyceryl transferasechromosome CDS531458 801 + 0.498127
licA IL2355 Choline kinase involved in LPS biosynthesischromosome CDS2525784 744 - 0.467742
lnt IL0945 Apolipoprotein N-acyltransferasechromosome CDS999172 1512 + 0.470238
lolA IL0666 Outer membrane lipoprotein-sorting proteinchromosome CDS720564 603 - 0.442786
lpxA IL0833 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferasechromosome CDS889773 768 - 0.453125
lpxB IL0832 Lipid A disaccharide synthetasechromosome CDS888634 1140 - 0.453509
lpxC IL0442 UDP-3-O-acyl-N-acetylglucosamine deacetylasechromosome CDS458205 921 + 0.484256
lpxD IL0835 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferasechromosome CDS891011 1026 - 0.474659
lpxK IL1512 Tetraacyldisaccharide-1-P 4'-kinasechromosome CDS1621170 990 - 0.475758
lspA IL1127 Lipoprotein signal peptidasechromosome CDS1206244 525 - 0.460952
lytB IL1125 4-Hydroxy-3-methylbut-2-enyl diphosphate reductasechromosome CDS1204809 945 - 0.503704
mdoB IL1652 Phosphoglycerol transferasechromosome CDS1766656 1974 + 0.429585
mltB IL0955 Membrane-bound lytic murein transglycosylase Bchromosome CDS1009674 972 + 0.455761
mltC IL0198 Membrane-bound lytic murein transglycosylase Cchromosome CDS214708 1191 - 0.49958
motY IL1801 Sodium-type flagellar protein motY precursorchromosome CDS1935806 897 - 0.481605
mraY IL0433 UDP-N-acetylmuramyl pentapeptide phosphotransferasechromosome CDS447692 1083 + 0.473684
mrcA IL2467 Peptidoglycan synthetasechromosome CDS2643009 2463 - 0.511165
mrcB IL2246 Peptidoglycan synthetasechromosome CDS2402329 2268 - 0.486772
mrdA IL0953 Cell division protein FtsIchromosome CDS1006656 1896 + 0.484177
mreC IL0382 Rod shape-determining proteinchromosome CDS400222 858 + 0.501166
mreD IL0383 Rod shape-determining proteinchromosome CDS401076 486 + 0.452675
murA IL0409 UDP-N-acetylglucosamine1-carboxyvinyltransferasechromosome CDS423851 1260 + 0.483333
murB IL2004 UDP-N-acetylenolpyruvoylglucosamine reductasechromosome CDS2141733 1002 - 0.48503
murC_1 IL0437 UDP-N-acetylmuramate-alanine ligasechromosome CDS452463 1473 + 0.497624
murC_2 IL2261 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligasechromosome CDS2418876 1302 - 0.50768
murD IL0434 UDP-N-acetylmuramoylalanine-D-glutamate ligasechromosome CDS448781 1392 + 0.494253
murE IL0431 UDP-N-acetylmuramyl tripeptide synthasechromosome CDS444835 1464 + 0.519126
murF IL0432 UDP-N-acetylmuramyl pentapeptide synthasechromosome CDS446295 1404 + 0.509259
murG IL0436 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferasechromosome CDS451382 1089 + 0.503214
murI IL0597 Glutamate racemasechromosome CDS642184 747 + 0.52075
nlpD IL0746 Lipoprotein NlpDchromosome CDS806826 918 - 0.444444
ompA IL1565 Outer membrane protein and related peptidoglycan-associated (lipo)proteinschromosome CDS1678131 627 - 0.464115
oprF IL1982 Outer membrane porinchromosome CDS2113899 1092 - 0.467949
pal IL1079 Peptidoglycan-associated lipoproteinchromosome CDS1165086 537 - 0.459963
plcC IL2595 Phospholipase Cchromosome CDS2791506 2040 + 0.480882
prc IL1274 Carboxyl-terminal protease, periplasmicchromosome CDS1362268 2058 + 0.448494
rffG IL0541 DTDP-D-glucose 4,6-dehydratasechromosome CDS572120 1059 + 0.413598
rffH IL0542 DTDP-glucose pyrophosphorylasechromosome CDS573175 879 + 0.414107
rlpA IL0956 Rare lipoprotein Achromosome CDS1010632 828 + 0.463768
rlpB IL0948 Rare lipoprotein Bchromosome CDS1003586 495 + 0.466667
siaA IL0520 UDP-N-acetylglucosamine 2-epimerasechromosome CDS546134 1140 + 0.488596
siaB IL0518 CMP-sialic acid synthetasechromosome CDS544394 690 + 0.508696
siaC IL0519 Sialic acid synthasechromosome CDS545076 1059 + 0.506138
slp IL1829 Starvation-inducible outer membrane lipoproteinchromosome CDS1962398 579 - 0.481865
slt IL0012 Soluble lytic murein transglycosylasechromosome CDS14669 1950 + 0.484615
tolA IL1081 TolA-like proteinchromosome CDS1167037 804 - 0.481343
tolC IL1957 Outer membrane proteinchromosome CDS2084632 1386 + 0.478355
ugd IL0538 UDP-glucose 6-dehydrogenasechromosome CDS568049 1167 + 0.45844
vacJ IL1097 Surface lipoproteinchromosome CDS1181227 747 - 0.468541
wecC IL0556 UDP-N-acetyl-D-mannosaminuronate dehydrogenasechromosome CDS586498 1263 + 0.364212
wecE IL0545 Predicted pyridoxal phosphate-dependent enzymechromosome CDS575633 1143 + 0.388451