Gene list
Applied filters:
COG category: Replication, recombination and repair
Genomic element: chromosome
Number of genes found: 172
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Enterococcus faecalis V583, V583 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | EF1874 | transposase, IS256 family | chromosome | CDS | 1818555 | 1191 | + | 0.435768 |
NA | EF2344 | hypothetical protein | chromosome | CDS | 2265603 | 354 | - | 0.387006 |
NA | EF2826 | hypothetical protein | chromosome | CDS | 2722135 | 408 | - | 0.345588 |
NA | EF2132 | recT protein, putative | chromosome | CDS | 2041370 | 924 | - | 0.348485 |
NA | EF1847 | site-specific recombinase, phage integrase family | chromosome | CDS | 1793028 | 1179 | - | 0.317218 |
NA | EF2020 | hypothetical protein | chromosome | CDS | 1948550 | 813 | - | 0.276753 |
NA | EF2130 | DnaD domain protein | chromosome | CDS | 2039727 | 852 | - | 0.333333 |
NA | EF0196 | site-specific recombinase, resolvase family | chromosome | CDS | 189621 | 576 | - | 0.387153 |
NA | EF1080 | ImpB/MucB/SamB family protein | chromosome | CDS | 1050218 | 1317 | + | 0.388762 |
NA | EF1595 | MutT/nudix family protein | chromosome | CDS | 1547130 | 426 | + | 0.396714 |
NA | EF1377 | ATP-dependent RNA helicase, DEAD/DEAH box family | chromosome | CDS | 1353068 | 1350 | + | 0.359259 |
NA | EF1454 | terminase, small subunit, internal deletion | chromosome | CDS | 1418329 | 726 | + | 0.356749 |
NA | EF1404 | MutS2 family protein | chromosome | CDS | 1381546 | 2367 | + | 0.3891 |
NA | EF2315 | hypothetical protein | chromosome | CDS | 2238911 | 249 | - | 0.558233 |
NA | EF0659 | phage SPO1 DNA polymerase-related protein, putative | chromosome | CDS | 610555 | 651 | + | 0.403994 |
NA | EF3218 | mutator MutT protein, putative | chromosome | CDS | 3089810 | 417 | - | 0.371703 |
NA | EF2145 | site-specific recombinase, phage integrase family | chromosome | CDS | 2047004 | 1143 | + | 0.308836 |
NA | EF1855 | transposase, IS256 family | chromosome | CDS | 1800063 | 1293 | - | 0.402939 |
NA | EF1279 | DNA replication protein, putative | chromosome | CDS | 1246722 | 771 | + | 0.367056 |
NA | EF2974 | MutS2 family protein | chromosome | CDS | 2846146 | 2109 | - | 0.389284 |
NA | EF0330 | SNF2 domain protein | chromosome | CDS | 305153 | 1374 | + | 0.408297 |
NA | EF2838 | DNA replication protein DnaC, putative | chromosome | CDS | 2727686 | 852 | - | 0.369718 |
NA | EF1162 | helicase, putative | chromosome | CDS | 1132387 | 2382 | + | 0.384131 |
NA | EF2096 | tail protein | chromosome | CDS | 2015568 | 5163 | - | 0.331203 |
NA | EF2452 | methylase, putative | chromosome | CDS | 2370079 | 555 | - | 0.367568 |
NA | EF2546 | site-specific recombinase, phage integrase family | chromosome | CDS | 2461061 | 1140 | + | 0.277193 |
NA | EF2338 | transcriptional regulator, Cro/CI family | chromosome | CDS | 2259869 | 1185 | - | 0.391561 |
NA | EF2736 | exonuclease | chromosome | CDS | 2645041 | 534 | + | 0.353933 |
NA | EF2185 | ISEf1, transposase | chromosome | CDS | 2101597 | 1179 | + | 0.350297 |
NA | EF2378 | DNA polymerase III, alpha subunit, Gram-positive type | chromosome | CDS | 2301329 | 4356 | - | 0.391644 |
NA | EF1425 | hypothetical protein | chromosome | CDS | 1402596 | 561 | + | 0.320856 |
NA | EF2129 | DNA replication protein, putative | chromosome | CDS | 2038844 | 870 | - | 0.358621 |
NA | EF2173 | ISEf1, transposase | chromosome | CDS | 2082363 | 1179 | + | 0.350297 |
NA | EF1152 | conserved hypothetical protein | chromosome | CDS | 1122565 | 1164 | + | 0.407216 |
NA | EF2632 | IS256, transposase | chromosome | CDS | 2544006 | 1173 | + | 0.365729 |
NA | EF2693 | conserved hypothetical protein | chromosome | CDS | 2609767 | 267 | + | 0.382022 |
NA | EF0143 | transcriptional regulator, Cro/CI family | chromosome | CDS | 140885 | 1344 | + | 0.328869 |
NA | EF1884 | transposase, IS116/IS110/IS902 family | chromosome | CDS | 1829566 | 1251 | + | 0.374101 |
NA | EF2528 | transcriptional regulator, Cro/CI family | chromosome | CDS | 2451422 | 1284 | - | 0.320872 |
NA | EF2810 | conserved hypothetical protein | chromosome | CDS | 2707021 | 909 | - | 0.361936 |
NA | EF1979 | ATPase, AAA family | chromosome | CDS | 1916384 | 1278 | + | 0.424883 |
NA | EF1443 | conserved hypothetical protein | chromosome | CDS | 1412864 | 588 | + | 0.358844 |
NA | EF2283 | site-specific recombinase, resolvase family, putative | chromosome | CDS | 2204960 | 1614 | - | 0.508674 |
NA | EF0144 | conserved domain protein | chromosome | CDS | 142246 | 615 | + | 0.295935 |
NA | EF0363 | ISEf1, transposase | chromosome | CDS | 331108 | 1179 | + | 0.350297 |
NA | EF0125 | IS256, transposase | chromosome | CDS | 129645 | 1173 | + | 0.365729 |
NA | EF2696 | MutT/nudix family protein | chromosome | CDS | 2611104 | 597 | - | 0.39531 |
NA | EF2240 | site-specific recombinase, phage integrase family | chromosome | CDS | 2163823 | 1149 | - | 0.345518 |
NA | EF0512 | DNA-damage-inducible protein J, putative | chromosome | CDS | 474678 | 267 | + | 0.303371 |
NA | EF2340 | C-5 cytosine-specific DNA methylase | chromosome | CDS | 2261591 | 996 | - | 0.438755 |
NA | EF0534 | site-specific recombinase, resolvase family | chromosome | CDS | 492701 | 555 | - | 0.367568 |
NA | EF0615 | transposase, IS200 family | chromosome | CDS | 575151 | 399 | + | 0.350877 |
NA | EF3068 | conserved hypothetical protein | chromosome | CDS | 2939535 | 654 | - | 0.397554 |
NA | EF2187 | IS256, transposase | chromosome | CDS | 2103109 | 1173 | - | 0.365729 |
NA | EF1750 | endo/excinuclease amino terminal domain protein | chromosome | CDS | 1697460 | 963 | + | 0.369678 |
NA | EF0913 | transposase, putative | chromosome | CDS | 879285 | 1071 | + | 0.348273 |
NA | EF1648 | site-specific recombinase, phage integrase family | chromosome | CDS | 1600071 | 900 | - | 0.354444 |
NA | EF3215 | IS256, transposase | chromosome | CDS | 3084337 | 1173 | + | 0.365729 |
NA | EF0492 | hypothetical protein | chromosome | CDS | 458379 | 618 | + | 0.355987 |
NA | EF2128 | conserved hypothetical protein | chromosome | CDS | 2038410 | 426 | - | 0.377934 |
NA | EF1886 | transcriptional regulator, Cro/CI family | chromosome | CDS | 1831079 | 1185 | - | 0.38903 |
NA | EF1434 | DnaD domain protein | chromosome | CDS | 1408381 | 765 | + | 0.343791 |
NA | EF2114 | adenine methyltransferase, putative | chromosome | CDS | 2032172 | 1203 | - | 0.351621 |
NA | EF2409 | DNA repair protein RecO, putative | chromosome | CDS | 2329648 | 789 | - | 0.340938 |
NA | EF1154 | DNA replication protein DnaD, putative | chromosome | CDS | 1125276 | 717 | + | 0.34728 |
NA | EF2043 | site-specific recombinase, phage integrase family | chromosome | CDS | 1961337 | 1149 | + | 0.328111 |
NA | EF0780 | MutT/nudix family protein | chromosome | CDS | 738256 | 408 | + | 0.35049 |
NA | EF2800 | ISEf1, transposase | chromosome | CDS | 2701329 | 1179 | - | 0.350297 |
NA | EF0595 | ISEf1, transposase | chromosome | CDS | 559459 | 1179 | - | 0.350297 |
NA | EF2089 | hypothetical protein | chromosome | CDS | 2008474 | 420 | - | 0.3 |
NA | EF2663 | helicase, putative, RecD/TraA family | chromosome | CDS | 2574013 | 2598 | - | 0.39107 |
NA | EF0479 | site-specific recombinase, phage integrase family | chromosome | CDS | 445282 | 1170 | - | 0.302564 |
NA | EF3100 | IS256, transposase | chromosome | CDS | 2975706 | 1173 | + | 0.365729 |
NA | EF1978 | DNA-3-methyladenine glycosylase | chromosome | CDS | 1915578 | 690 | - | 0.402899 |
NA | EF2955 | site-specific recombinase, phage integrase family | chromosome | CDS | 2828409 | 1146 | + | 0.34904 |
NA | EF1203 | conserved hypothetical protein TIGR00250 | chromosome | CDS | 1169356 | 423 | + | 0.397163 |
NA | EF2258 | conserved domain protein | chromosome | CDS | 2180257 | 618 | - | 0.365696 |
NA | EF2832 | conserved domain protein | chromosome | CDS | 2724686 | 99 | - | 0.363636 |
NA | EF2255 | site-specific recombinase, phage integrase family | chromosome | CDS | 2177344 | 1110 | - | 0.362162 |
NA | EF1652 | DNA processing protein DprA, putative | chromosome | CDS | 1605604 | 864 | - | 0.381944 |
NA | EF0166 | site-specific recombinase, phage integrase family | chromosome | CDS | 163120 | 1167 | + | 0.299914 |
NA | EF0934 | hydrolase, TatD family | chromosome | CDS | 898744 | 771 | + | 0.390402 |
NA | EF0325 | DNA polymerase, putative | chromosome | CDS | 299279 | 1962 | + | 0.428135 |
NA | EF1417 | site-specific recombinase, phage integrase family | chromosome | CDS | 1398097 | 1227 | - | 0.330888 |
NA | EF2855 | site-specific recombinase, phage integrase family | chromosome | CDS | 2735627 | 1182 | + | 0.314721 |
NA | EF0935 | primase-related protein | chromosome | CDS | 899523 | 573 | + | 0.375218 |
NA | EF2688 | Snf2 family protein | chromosome | CDS | 2600549 | 3198 | - | 0.38055 |
NA | EF1445 | replicase domain protein | chromosome | CDS | 1413934 | 318 | + | 0.383648 |
NA | EF2326 | group II intron reverse transcriptase maturase | chromosome | CDS | 2249859 | 1887 | - | 0.428723 |
NA | EF0682 | DNA repair exonuclease family protein | chromosome | CDS | 635432 | 1236 | + | 0.402104 |
NA | EF1141 | MutT/nudix family protein | chromosome | CDS | 1110759 | 447 | + | 0.407159 |
NA | EF2088 | hypothetical protein | chromosome | CDS | 2008207 | 255 | - | 0.25098 |
NA | EF1452 | adenine methyltransferase, putative | chromosome | CDS | 1416690 | 1269 | + | 0.356186 |
NA | EF1009 | ATP-dependent RNA helicase, DEAD/DEAH box family | chromosome | CDS | 967965 | 1302 | + | 0.396313 |
NA | EF0529 | IS256, transposase | chromosome | CDS | 489003 | 1173 | + | 0.365729 |
NA | EF0846 | ATP-dependent RNA helicase, DEAD/DEAH box family | chromosome | CDS | 805108 | 1611 | + | 0.414029 |
NA | EF1537 | integrase/recombinase XerD, putative | chromosome | CDS | 1492090 | 891 | + | 0.386083 |
NA | EF0303 | phage integrase | chromosome | CDS | 289354 | 1215 | - | 0.347325 |
NA | EF0882 | replication initiation and membrane attachment protein DnaB, putative | chromosome | CDS | 845538 | 1410 | + | 0.36383 |
NA | EF3217 | helicase, putative | chromosome | CDS | 3086941 | 2895 | - | 0.324698 |
NA | EF2374 | DNA polymerase III, epsilon subunit/ATP-dependent helicase DinG | chromosome | CDS | 2295158 | 2790 | - | 0.385305 |
NA | EF2841 | recT protein, putative | chromosome | CDS | 2730131 | 1017 | - | 0.371681 |
NA | EF2839 | DnaD domain protein | chromosome | CDS | 2728549 | 789 | - | 0.348542 |
NA | EF2446 | conserved hypothetical protein | chromosome | CDS | 2363778 | 1029 | - | 0.339164 |
NA | EF1318 | hypothetical protein | chromosome | CDS | 1285720 | 387 | - | 0.364341 |
NA | EF0841 | conserved domain protein | chromosome | CDS | 800734 | 1029 | + | 0.35277 |
NA | EF1280 | DNA replication protein, putative | chromosome | CDS | 1247511 | 843 | + | 0.362989 |
comEA | EF2449 | competence protein comEA | chromosome | CDS | 2367789 | 645 | - | 0.412403 |
comFA | EF1767 | competence protein F | chromosome | CDS | 1713273 | 1317 | - | 0.405467 |
dinP | EF2756 | DNA-damage-inducible protein P | chromosome | CDS | 2665054 | 1119 | - | 0.390527 |
dnaA | EF0001 | chromosomal replication initiator protein DnaA | chromosome | CDS | 59 | 1344 | + | 0.389137 |
dnaB | EF0013 | replicative DNA helicase | chromosome | CDS | 13440 | 1368 | + | 0.394737 |
dnaE | EF1044 | DNA polymerase III, alpha subunit | chromosome | CDS | 1006081 | 3330 | + | 0.388288 |
dnaG | EF1521 | DNA primase | chromosome | CDS | 1476171 | 1887 | + | 0.384208 |
dnaI | EF0883 | primosomal protein DnaI | chromosome | CDS | 846944 | 933 | + | 0.389068 |
dnaN | EF0002 | DNA polymerase III, beta subunit | chromosome | CDS | 1604 | 1131 | + | 0.343943 |
dnaQ | EF0053 | DNA polymerase III, epsilon subunit | chromosome | CDS | 54156 | 870 | - | 0.313793 |
dnaX | EF2781 | DNA polymerase III, gamma and tau subunits | chromosome | CDS | 2684134 | 1761 | - | 0.413401 |
drrC | EF1032 | daunorubicin resistance protein | chromosome | CDS | 991163 | 2238 | - | 0.37891 |
ebsB | EF1728 | EbsB protein | chromosome | CDS | 1677525 | 408 | + | 0.375 |
exoA | EF2735 | exodeoxyribonuclease | chromosome | CDS | 2644251 | 756 | + | 0.374339 |
fpg | EF0879 | formamidopyrimidine-DNA glycosylase | chromosome | CDS | 843422 | 843 | + | 0.400949 |
gyrA | EF0006 | DNA gyrase, A subunit | chromosome | CDS | 6674 | 2502 | + | 0.408873 |
gyrB | EF0005 | DNA gyrase, B subunit | chromosome | CDS | 4690 | 1929 | + | 0.413686 |
hexA | EF3167 | DNA mismatch repair protein HexA | chromosome | CDS | 3038524 | 2577 | - | 0.39969 |
hexB | EF3166 | DNA mismatch repair protein HexB | chromosome | CDS | 3036360 | 2133 | - | 0.433193 |
holB | EF2762 | DNA polymerase III, delta prime subunit | chromosome | CDS | 2669997 | 951 | - | 0.365931 |
hup | EF1550 | DNA-binding protein HU | chromosome | CDS | 1505186 | 276 | + | 0.384058 |
ligA | EF0722 | DNA ligase, NAD-dependent | chromosome | CDS | 679157 | 2031 | + | 0.415559 |
mfd | EF0257 | transcription-repair coupling factor | chromosome | CDS | 233149 | 3570 | + | 0.398319 |
mutY | EF2704 | A/G-specific adenine glycosylase | chromosome | CDS | 2617476 | 1185 | - | 0.405907 |
nfo | EF1736 | endonuclease IV | chromosome | CDS | 1683636 | 894 | - | 0.380313 |
nth | EF1155 | endonuclease III | chromosome | CDS | 1126007 | 648 | + | 0.405864 |
nuc-1 | EF0511 | thermonuclease precursor | chromosome | CDS | 473983 | 585 | + | 0.393162 |
ogt | EF0277 | methylated-DNA--protein-cysteineS-methyltransferase | chromosome | CDS | 264296 | 432 | + | 0.423611 |
parC | EF1614 | DNA topoisomerase IV, A subunit | chromosome | CDS | 1571205 | 2463 | - | 0.383272 |
parE | EF1615 | DNA topoisomerase IV, B subunit | chromosome | CDS | 1573680 | 2058 | - | 0.405248 |
pcrA | EF0721 | ATP-dependent DNA helicase PcrA | chromosome | CDS | 676773 | 2259 | + | 0.392652 |
phrB | EF1598 | deoxyribodipyrimidine photolyase | chromosome | CDS | 1550657 | 1434 | - | 0.369596 |
polA | EF0878 | DNA polymerase I | chromosome | CDS | 840674 | 2649 | + | 0.360891 |
priA | EF3125 | primosomal protein n' | chromosome | CDS | 3000651 | 2433 | - | 0.418002 |
radC | EF2926 | DNA repair protein RadC | chromosome | CDS | 2803459 | 699 | - | 0.397711 |
recA | EF3171 | recA protein | chromosome | CDS | 3044471 | 1047 | - | 0.425979 |
recF | EF0004 | DNA replication and repair protein RecF | chromosome | CDS | 3545 | 1128 | + | 0.37766 |
recG | EF3113 | ATP-dependent DNA helicase RecG | chromosome | CDS | 2987610 | 2037 | - | 0.424644 |
recJ | EF1688 | single-stranded-DNA-specific exonuclease RecJ | chromosome | CDS | 1637506 | 2313 | - | 0.391699 |
recN | EF0984 | DNA repair protein RecN | chromosome | CDS | 941470 | 1674 | + | 0.388889 |
recQ-1 | EF1545 | ATP-dependent DNA helicase RecQ | chromosome | CDS | 1499068 | 1443 | + | 0.380457 |
recQ-2 | EF2459 | ATP-dependent DNA helicase RecQ | chromosome | CDS | 2377849 | 1770 | - | 0.378531 |
recR | EF2766 | recombination protein RecR | chromosome | CDS | 2672145 | 597 | - | 0.393635 |
rexA | EF1113 | exonuclease RexA | chromosome | CDS | 1083366 | 3795 | + | 0.385244 |
rexB | EF1112 | exonuclease RexB | chromosome | CDS | 1079783 | 3591 | + | 0.388471 |
rnhB | EF1653 | ribonuclease HII | chromosome | CDS | 1606528 | 768 | - | 0.389323 |
rnhC | EF1267 | ribonuclease HIII | chromosome | CDS | 1233959 | 918 | - | 0.404139 |
ruvA | EF0066 | Holliday junction DNA helicase RuvA | chromosome | CDS | 68667 | 615 | + | 0.395122 |
ruvB | EF0067 | Holliday junction DNA helicase RuvB | chromosome | CDS | 69294 | 1017 | + | 0.423795 |
sbcC | EF2689 | exonuclease SbcC | chromosome | CDS | 2603766 | 3138 | - | 0.378904 |
sbcD | EF2690 | exonuclease SbcD | chromosome | CDS | 2606908 | 1137 | - | 0.396658 |
ssb-1 | EF0008 | single-strand binding protein | chromosome | CDS | 9697 | 567 | + | 0.386243 |
ssb-2 | EF0499 | single-strand binding protein | chromosome | CDS | 462000 | 459 | + | 0.385621 |
ssb-3 | EF0510 | single-strand binding protein | chromosome | CDS | 473543 | 417 | + | 0.369305 |
tag-1 | EF0278 | DNA-3-methyladenine glycosylase I | chromosome | CDS | 264740 | 513 | + | 0.374269 |
tag-2 | EF3050 | DNA-3-methyladenine glycosylase I | chromosome | CDS | 2925039 | 552 | - | 0.414855 |
topA | EF1650 | DNA topoisomerase I | chromosome | CDS | 1602597 | 2079 | - | 0.396825 |
topB-1 | EF2064 | DNA topoisomerase III | chromosome | CDS | 1985448 | 2082 | - | 0.384246 |
topB-2 | EF2312 | DNA topoisomerase III | chromosome | CDS | 2234375 | 2118 | - | 0.578376 |
ung | EF0948 | uracil-DNA glycosylase | chromosome | CDS | 912502 | 681 | + | 0.400881 |
uvrA | EF0763 | excinuclease ABC, subunit A | chromosome | CDS | 721603 | 2820 | + | 0.402837 |
uvrB | EF0762 | excinuclease ABC, subunit B | chromosome | CDS | 719488 | 1998 | + | 0.394895 |
uvrC | EF1406 | excinuclease ABC, subunit C | chromosome | CDS | 1384489 | 1797 | + | 0.35448 |
xseA | EF0979 | exodeoxyribonuclease VII, large subunit | chromosome | CDS | 937576 | 1347 | + | 0.410542 |
xseB | EF0980 | exodeoxyribonuclease VII, small subunit | chromosome | CDS | 938924 | 231 | + | 0.372294 |