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2024-05-18 09:48:45

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome II

Number of genes found: 23

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Pseudoalteromonas haloplanktis TAC125, TAC125
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PSHAb0027 Peyer's patch-specific virulence factor GipA (transposase)chromosome II CDS33532 1044 + 0.372605
NA PSHAb0291 putative ADA regulatory protein (Regulatory protein of adaptative response)chromosome II CDS340959 1365 + 0.423443
NA PSHAb0040 putative uracil-DNA glycosylase family proteinchromosome II CDS48095 603 - 0.437811
NA PSHAb0050 conserved protein of unknown functionchromosome II CDS54614 978 + 0.43047
NA PSHAb0224 putative Mini-circle transposase for insertion sequence (IS117)chromosome II CDS264017 303 - 0.366337
NA PSHAb0003 putative DNA helicase with SNF2 domainchromosome II CDS2802 3147 + 0.368605
NA PSHAb0039 putative protein with helicase domainchromosome II CDS43759 4056 + 0.40927
NA PSHAb0554 putative site-specific tyrosine integrase/recombinase; may be used for the termination of replication of chromosome 2chromosome II CDS620550 1212 + 0.365512
NA PSHAb0026 putative transposase IS200-likechromosome II CDS32988 276 - 0.373188
NA PSHAb0441 conserved protein of unknown functionchromosome II CDS503476 306 + 0.398693
NA PSHAb0094 putative orphan proteinchromosome II CDS111838 864 - 0.329861
NA PSHAb0076 conserved protein of unknown function ; putative transposase DNA-binding domainchromosome II CDS87906 1176 + 0.479592
NA PSHAb0119 putative helicase (recQ-like)chromosome II CDS144978 1947 + 0.426297
NA PSHAb0096 putative ABC transporter ATP-binding proteinchromosome II CDS113073 1959 - 0.370597
hupB PSHAb0462 DNA-binding protein HU-beta (NS1) (HU-1)chromosome II CDS520113 276 + 0.42029
ogt PSHAb0293 putative Methylated-DNA-[protein]-cysteine S-methyltransferase; O6-methylguanine-DNA methyltransferasechromosome II CDS343858 468 + 0.429487
phr PSHAb0453 putative deoxyribodipyrimidine photolyasechromosome II CDS512500 1407 + 0.41791
rhlE PSHAb0411 putative ATP-dependent RNA helicase with P-loop hydrolase domain; DEAD-box protein familychromosome II CDS467541 1302 + 0.417051
sbcC PSHAb0054 exonuclease sbcCD subunit Cchromosome II CDS58038 3654 - 0.406404
sbcD PSHAb0055 exonuclease sbcCD subunit Dchromosome II CDS61688 1248 - 0.427885
umuC PSHAb0536 component of DNA polymerase V with UmuDchromosome II CDS601249 1239 - 0.412429
xni PSHAb0468 putative exonuclease IX, 5'-3' exonucleasechromosome II CDS526547 774 - 0.375969
yoaA PSHAb0497 putative ATP-dependent helicase YoaA with nucleotide triphosphate hydrolase domain, SOS repair, DinG familychromosome II CDS561458 1917 + 0.43036