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2024-05-19 01:48:44

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome I

Number of genes found: 159

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Burkholderia pseudomallei 1710b, 1710b
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BURPS1710b_2740 ISBma2, transposasechromosome I CDS3032564 1464 - 0.640027
NA BURPS1710b_1964 Transposasechromosome I CDS2138758 1317 - 0.631739
NA BURPS1710b_1482 conserved domain proteinchromosome I CDS1557077 633 + 0.703002
NA BURPS1710b_0786 transposase Bchromosome I CDS803960 855 + 0.623392
NA BURPS1710b_1670 DNA methylasechromosome I CDS1782557 1137 + 0.636763
NA BURPS1710b_1775 transposasechromosome I CDS1931956 267 + 0.588015
NA BURPS1710b_0398 hypothetical proteinchromosome I CDS413736 369 + 0.674797
NA BURPS1710b_1909 conserved domain proteinchromosome I CDS2078961 399 - 0.686717
NA BURPS1710b_2680 base excision DNA repair protein, HhH-GPD familychromosome I CDS2974600 939 - 0.692226
NA BURPS1710b_0960 transposase Bchromosome I CDS1010015 855 - 0.624561
NA BURPS1710b_0297 IS407A, transposase OrfAchromosome I CDS305337 264 + 0.564394
NA BURPS1710b_0961 transposase Achromosome I CDS1010863 306 - 0.555556
NA BURPS1710b_1653 Phage integrase family domain proteinchromosome I CDS1762688 1449 - 0.592133
NA BURPS1710b_1238 endo/excinuclease domain proteinchromosome I CDS1288615 855 - 0.723977
NA BURPS1710b_1928 conserved domain proteinchromosome I CDS2105804 411 + 0.683698
NA BURPS1710b_1678 phage terminase, small subunit, putative, P27 familychromosome I CDS1797038 486 + 0.617284
NA BURPS1710b_1280 rmpB-like proteinchromosome I CDS1336060 912 - 0.588816
NA BURPS1710b_3651 DNA methylasechromosome I CDS3976762 603 - 0.689884
NA BURPS1710b_0967 putative phage-related integrasechromosome I CDS1016158 1239 - 0.625504
NA BURPS1710b_3395 NUDIX domain proteinchromosome I CDS3716110 510 + 0.713726
NA BURPS1710b_1722 probable site-specificchromosome I CDS1853156 1020 - 0.597059
NA BURPS1710b_1649 38Lchromosome I CDS1750026 2325 + 0.576344
NA BURPS1710b_0298 IS407A, transposase OrfBchromosome I CDS305624 834 + 0.617506
NA BURPS1710b_2387 hypothetical proteinchromosome I CDS2658767 609 + 0.719212
NA BURPS1710b_1290 prophage CP4-like integrasechromosome I CDS1352637 1215 - 0.644444
NA BURPS1710b_1724 transposase Bchromosome I CDS1855762 855 - 0.624561
NA BURPS1710b_1725 transposase Achromosome I CDS1856610 306 - 0.555556
NA BURPS1710b_2170 DNA invertasechromosome I CDS2404979 846 + 0.550827
NA BURPS1710b_2607 phage SPO1 DNA polymerase domain proteinchromosome I CDS2891156 1407 - 0.750533
NA BURPS1710b_0408 hypothetical proteinchromosome I CDS420373 1572 + 0.702926
NA BURPS1710b_2106 Transposasechromosome I CDS2300842 3180 - 0.616352
NA BURPS1710b_2190 Transposase IS911 HTH and LZ regionchromosome I CDS2432217 144 - 0.659722
NA BURPS1710b_2172 recombinasechromosome I CDS2408634 645 - 0.536434
NA BURPS1710b_3074 ATPase, AAA family proteinchromosome I CDS3379990 1311 - 0.68955
NA BURPS1710b_1655 Phage integrase familychromosome I CDS1764416 1101 - 0.5495
NA BURPS1710b_1647 conserved hypothetical proteinchromosome I CDS1746068 1296 + 0.574846
NA BURPS1710b_0775 NUDIX domain family proteinchromosome I CDS785158 858 + 0.715618
NA BURPS1710b_0691 conserved hypothetical proteinchromosome I CDS699793 1476 + 0.765583
NA BURPS1710b_3312 conserved hypothetical proteinchromosome I CDS3628316 999 + 0.718719
NA BURPS1710b_2336 ATP-dependent helicase, putativechromosome I CDS2608744 2259 - 0.696768
NA BURPS1710b_2953 ISBma2, transposasechromosome I CDS3260313 1464 + 0.639344
NA BURPS1710b_3055 integrasechromosome I CDS3366571 210 + 0.609524
NA BURPS1710b_3663 hypothetical proteinchromosome I CDS4002848 816 + 0.585784
NA BURPS1710b_1776 Integrase core domain proteinchromosome I CDS1932267 822 + 0.611922
NA BURPS1710b_1451 pyrophosphatase, MutT/nudix familychromosome I CDS1524926 591 + 0.63621
NA BURPS1710b_0747 methyltransferase, putativechromosome I CDS761014 690 + 0.710145
NA BURPS1710b_3169 conserved hypothetical protein TIGR00250chromosome I CDS3478107 441 - 0.664399
NA BURPS1710b_2364 propable polBchromosome I CDS2638416 777 - 0.647362
NA BURPS1710b_2963 pyrophosphatase, MutT/nudix familychromosome I CDS3269438 1452 - 0.689394
NA BURPS1710b_3637 63 kDa proteinchromosome I CDS3962445 2745 + 0.688525
NA BURPS1710b_0312 IS407A, transposase OrfBchromosome I CDS327895 834 - 0.616307
NA BURPS1710b_1289 Transposasechromosome I CDS1349622 1317 - 0.631739
NA BURPS1710b_0322 O6-methylguanine-DNA methyltransferasechromosome I CDS335807 1095 + 0.700457
NA BURPS1710b_2439 Uncharacterized protein family UPF0006chromosome I CDS2707548 810 - 0.67284
NA BURPS1710b_3580 uracil-DNA glycosylasechromosome I CDS3902897 816 + 0.693627
NA BURPS1710b_0785 transposase Achromosome I CDS803661 306 + 0.555556
NA BURPS1710b_3387 N6-adenine-specific DNA methylasechromosome I CDS3708114 1293 + 0.716164
NA BURPS1710b_1648 PBCV-1 DNA ligasechromosome I CDS1748090 921 + 0.587405
NA BURPS1710b_1697 gp27chromosome I CDS1819171 789 + 0.60583
NA BURPS1710b_0913 hypothetical proteinchromosome I CDS948623 501 + 0.738523
NA BURPS1710b_3519 nudix hydrolasechromosome I CDS3835537 651 + 0.639017
NA BURPS1710b_0313 IS407A, transposase OrfAchromosome I CDS328752 264 - 0.568182
NA BURPS1710b_3669 prophage CP4-like integrasechromosome I CDS4016861 1389 - 0.598272
NA BURPS1710b_2972 radical SAM domain proteinchromosome I CDS3276196 1158 - 0.686529
NA BURPS1710b_1320 conserved hypothetical proteinchromosome I CDS1388816 477 + 0.681342
NA BURPS1710b_3337 ISBma2, transposasechromosome I CDS3658099 1464 - 0.639344
NA BURPS1710b_0809 ElaA family proteinchromosome I CDS840972 894 - 0.676734
agmG BURPS1710b_3386 unnamed protein productchromosome I CDS3705828 2118 + 0.701605
alkA BURPS1710b_0323 DNA-3-methyladenine glycosylase IIchromosome I CDS336808 1032 + 0.750969
cho BURPS1710b_3040 possible DNA polymerase/helicasechromosome I CDS3353642 1146 - 0.705061
comE BURPS1710b_2985 competence protein ComEchromosome I CDS3291282 318 - 0.710692
dinB BURPS1710b_2751 DNA polymerase IVchromosome I CDS3050940 1368 - 0.699561
dnaA BURPS1710b_0301 chromosomal replication initiator protein DnaAchromosome I CDS310638 1602 - 0.656679
dnaB BURPS1710b_2412 replicative DNA helicasechromosome I CDS2685744 1383 - 0.655098
dnaE BURPS1710b_1356 DNA polymerase III, alpha subunit, form 1chromosome I CDS1426153 1170 + 0.691453
dnaE BURPS1710b_1355 DNA polymerase III, alpha subunit, form 1chromosome I CDS1422263 3762 + 0.677565
dnaE2 BURPS1710b_0692 DNA polymerase III, alpha subunit, form 2chromosome I CDS701238 3255 + 0.701075
dnaN BURPS1710b_0300 DNA polymerase III, beta subunitchromosome I CDS309372 1104 - 0.63587
dnaQ BURPS1710b_1599 DNA polymerase III, epsilon subunitchromosome I CDS1679697 762 - 0.660105
dnaX BURPS1710b_2373 DNA polymerase III subunit gammachromosome I CDS2645356 2469 - 0.729445
fis BURPS1710b_3402 DNA-binding protein for site-specific recombination, transcription of rRNA and tRNA operons and DNA replicationchromosome I CDS3724880 234 + 0.594017
gyrA BURPS1710b_3000 DNA gyrase, A subunitchromosome I CDS3305251 2601 - 0.651672
gyrB BURPS1710b_0299 DNA gyrase, B subunitchromosome I CDS306716 2469 - 0.642365
hemU-1 BURPS1710b_0041 unnamed protein productchromosome I CDS44595 483 - 0.73499
hepA BURPS1710b_3658 helicase (Snf2 family)chromosome I CDS3988044 2883 - 0.56469
holA BURPS1710b_3449 DNA polymerase III, delta subunitchromosome I CDS3766232 1089 - 0.730946
holB BURPS1710b_2442 DNA polymerase III, delta prime subunitchromosome I CDS2708982 1035 - 0.735266
holC BURPS1710b_1177 DNA polymerase III, chi subunitchromosome I CDS1221778 417 + 0.690647
hrpA BURPS1710b_2776 ATP-dependent helicase HrpAchromosome I CDS3076287 4128 - 0.713178
ihfA BURPS1710b_1897 integration host factor, alpha subunitchromosome I CDS2066500 405 + 0.644444
ihfB BURPS1710b_2992 integration host factor, beta subunitchromosome I CDS3296938 324 - 0.623457
int BURPS1710b_2103 phage integrase family proteinchromosome I CDS2293652 1680 - 0.656548
intA BURPS1710b_0308 Integrase or site-specific recombinasechromosome I CDS317807 1245 + 0.59759
intD BURPS1710b_1723 prophage DLP12 integrasechromosome I CDS1854334 387 - 0.625323
ligA BURPS1710b_2588 DNA ligase, NAD-dependentchromosome I CDS2866551 2076 - 0.684971
mfd BURPS1710b_2513 transcription-repair coupling factorchromosome I CDS2779011 3570 + 0.691877
mod BURPS1710b_0259 type III DNA modification methyltransferasechromosome I CDS264836 2034 + 0.682399
mutL BURPS1710b_3308 DNA mismatch repair proteinchromosome I CDS3623512 2046 + 0.721896
mutM BURPS1710b_0758 formamidopyrimidine-DNA glycosylasechromosome I CDS770056 831 + 0.706378
mutS BURPS1710b_2691 DNA mismatch repair protein MutSchromosome I CDS2985054 2817 + 0.682286
mutT BURPS1710b_3533 pyrophosphatase, NUDIX familychromosome I CDS3848365 1005 - 0.663682
mutY BURPS1710b_0759 A/G-specific adenine glycosylasechromosome I CDS770891 1107 + 0.727191
nth BURPS1710b_1336 endonuclease IIIchromosome I CDS1401971 645 - 0.652713
ntpA BURPS1710b_0853 dATP pyrophosphohydrolasechromosome I CDS889087 477 + 0.677149
nudE BURPS1710b_1810 NUDIX family hydrolasechromosome I CDS1973478 483 + 0.726708
parC BURPS1710b_1301 DNA topoisomerase IV, A subunitchromosome I CDS1365584 2319 + 0.68909
parE BURPS1710b_1300 DNA topoisomerase IV, subunit Bchromosome I CDS1363543 1983 + 0.66818
phrB BURPS1710b_2800 deoxyribodipyrimidine photolyasechromosome I CDS3110030 1461 - 0.742642
priA BURPS1710b_0169 primosomal protein n`chromosome I CDS174319 2268 - 0.723986
priB BURPS1710b_2415 primosomal replication protein nchromosome I CDS2688028 300 - 0.64
radC BURPS1710b_1139 DNA repair protein RadCchromosome I CDS1188445 837 - 0.739546
recA BURPS1710b_0971 recA proteinchromosome I CDS1022326 1071 + 0.64239
recB BURPS1710b_1520 exodeoxyribonuclease V, beta subunitchromosome I CDS1601225 5805 + 0.739535
recD BURPS1710b_1521 exodeoxyribonuclease V, alpha subunitchromosome I CDS1607026 2697 + 0.756396
recG BURPS1710b_3368 ATP-dependent DNA helicase RecGchromosome I CDS3688033 2601 - 0.746636
recJ BURPS1710b_2721 single-stranded-DNA-specific exonuclease RecJchromosome I CDS3015811 1695 + 0.717994
recN BURPS1710b_3329 DNA repair protein RecNchromosome I CDS3644687 1650 + 0.713333
recO BURPS1710b_2893 DNA repair protein RecOchromosome I CDS3202683 861 - 0.69338
recQ BURPS1710b_3783 ATP-dependent DNA helicase RecQchromosome I CDS4107553 1944 - 0.675926
recR BURPS1710b_2371 recombination protein RecRchromosome I CDS2644299 609 - 0.684729
rep BURPS1710b_0122 ATP-dependent DNA helicase Repchromosome I CDS125845 2202 - 0.653951
rhlE1 BURPS1710b_0914 ATP-dependent RNA helicasechromosome I CDS949259 1458 - 0.694102
rhlE1 BURPS1710b_2612 ATP-dependent RNA helicasechromosome I CDS2894650 1590 + 0.720755
rhlE2 BURPS1710b_1352 putative ATP-dependent RNA helicase 2chromosome I CDS1419139 1680 + 0.689881
rnhA BURPS1710b_1600 RNase Hchromosome I CDS1680477 441 - 0.668934
rnhB BURPS1710b_2568 ribonuclease HIIchromosome I CDS2845097 645 - 0.697674
ruvA BURPS1710b_3406 Holliday junction DNA helicase RuvAchromosome I CDS3727706 582 + 0.670103
ruvB BURPS1710b_3407 Holliday junction DNA helicase RuvBchromosome I CDS3728455 1071 + 0.690943
ruvC BURPS1710b_3405 crossover junction endodeoxyribonucleasechromosome I CDS3726805 828 + 0.71256
smf BURPS1710b_0345 SMF family proteinchromosome I CDS361726 1305 - 0.729502
ssb BURPS1710b_0781 single-strand binding proteinchromosome I CDS792916 558 + 0.704301
sthIM BURPS1710b_3656 Adenine specific DNA methylase Modchromosome I CDS3984579 1704 - 0.539319
tISRso14a BURPS1710b_0782 IS407A, transposase OrfAchromosome I CDS796892 264 + 0.568182
tISRso14a BURPS1710b_3798 IS407A, transposase OrfAchromosome I CDS4125373 120 + 0.525
tISRso14a BURPS1710b_1720 IS407A, transposase OrfAchromosome I CDS1848943 264 - 0.568182
tISRso14a BURPS1710b_3799 IS407A, transposase OrfAchromosome I CDS4125511 126 + 0.563492
tISRso14b BURPS1710b_0783 IS407A, transposase OrfBchromosome I CDS797179 834 + 0.616307
tISRso14b BURPS1710b_1719 IS407A, transposase OrfBchromosome I CDS1848086 834 - 0.616307
tISRso7 BURPS1710b_2219 unnamed protein productchromosome I CDS2478125 237 + 0.670886
tag BURPS1710b_0088 DNA-3-methyladenine glycosylase Ichromosome I CDS90362 609 + 0.655172
tatD BURPS1710b_2716 hydrolase, TatD familychromosome I CDS3011363 789 - 0.70469
tnp BURPS1710b_2188 Is2000 transposasechromosome I CDS2429670 417 + 0.640288
tnp BURPS1710b_1778 transposasechromosome I CDS1937740 573 + 0.621291
tnp24 BURPS1710b_3719 predicted transposasechromosome I CDS4058073 714 - 0.680672
tnpA BURPS1710b_0496 transposasechromosome I CDS502669 1221 - 0.622441
tnpA BURPS1710b_2342 ISBma1, transposasechromosome I CDS2617043 1221 + 0.621622
tnpA BURPS1710b_3784 ISBma1, transposasechromosome I CDS4109540 1221 - 0.621622
tnpA BURPS1710b_1783 ISBma1, transposasechromosome I CDS1943667 1221 + 0.621622
tnpR BURPS1710b_1284 transposon Tn2501 resolvasechromosome I CDS1341035 576 - 0.585069
topB BURPS1710b_0343 DNA topoisomerase IIIchromosome I CDS358475 2718 - 0.64496
tpnA BURPS1710b_2169 transposasechromosome I CDS2404002 465 + 0.55914
uvrA BURPS1710b_0779 excinuclease ABC, A subunitchromosome I CDS788534 2868 - 0.662134
uvrC BURPS1710b_2884 excinuclease ABC, C subunitchromosome I CDS3194213 2250 - 0.699556
uvrD BURPS1710b_1847 DNA helicase IIchromosome I CDS2017323 2364 + 0.690355
xerC BURPS1710b_0392 tyrosine recombinase XerCchromosome I CDS406939 933 - 0.694534
xerD BURPS1710b_1067 tyrosine recombinase XerDchromosome I CDS1121406 1527 + 0.684348
xseA BURPS1710b_1084 exodeoxyribonuclease VII, large subunitchromosome I CDS1137800 1533 + 0.731246
xth BURPS1710b_0371 exodeoxyribonuclease IIIchromosome I CDS387859 771 + 0.625162
xth-2 BURPS1710b_2765 exodeoxyribonuclease IIIchromosome I CDS3065333 969 + 0.687307