Gene list
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COG category: Replication, recombination and repair
Genomic element: chromosome I
Number of genes found: 104
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Brucella melitensis biovar Abortus, 2308 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | BAB1_0559 | transposase | chromosome I | CDS | 547084 | 300 | + | 0.543333 |
NA | BAB1_0146 | DNA mismatch repair protein MutS, C-terminal:Aldo/keto reductase:ATP/GTP-binding site motif A (P-loop):MutS 1 protein:DNA mis... | chromosome I | CDS | 160723 | 2733 | + | 0.603732 |
NA | BAB1_1716 | Crossover junction endodeoxyribonuclease RuvC | chromosome I | CDS | 1661425 | 522 | - | 0.597701 |
NA | BAB1_0552 | transposase | chromosome I | CDS | 542803 | 240 | + | 0.545833 |
NA | BAB1_0031 | Replication factor C conserved domain:ATP/GTP-binding site motif A (P-loop):AAA ATPase:AAA ATPase, central region | chromosome I | CDS | 35002 | 1809 | - | 0.619127 |
NA | BAB1_0554 | IS5 family element, transposase orfA | chromosome I | CDS | 544349 | 369 | + | 0.571816 |
NA | BAB1_1012 | Replication factor C conserved domain | chromosome I | CDS | 973141 | 1083 | + | 0.597415 |
NA | BAB1_0845 | Phosphoesterase PHP, N-terminal:PHP domain C-terminal region:OB-fold nucleic acid binding domain:DNA polymerase III alpha sub... | chromosome I | CDS | 820320 | 3492 | + | 0.579897 |
NA | BAB1_0668 | Uracil-DNA glycosylase superfamily | chromosome I | CDS | 657408 | 672 | - | 0.581845 |
NA | BAB1_1940 | NUDIX hydrolase | chromosome I | CDS | 1884308 | 417 | - | 0.597122 |
NA | BAB1_0549 | transposase | chromosome I | CDS | 541565 | 411 | + | 0.486618 |
NA | BAB1_2058 | putative DNA polymerase III, delta subunit | chromosome I | CDS | 1995217 | 1044 | + | 0.599617 |
NA | BAB1_0557 | ISBm1, transposase orfA | chromosome I | CDS | 545961 | 429 | + | 0.592075 |
NA | BAB1_0747 | Integrase, catalytic domain | chromosome I | CDS | 730551 | 2115 | + | 0.523404 |
NA | BAB1_0518 | HhH-GPD:Iron-sulfur cluster loop:Endonuclease III, FCL:A/G-specific adenine glycosylase MutY | chromosome I | CDS | 510243 | 1077 | - | 0.610956 |
NA | BAB1_0536 | Bacterial regulatory protein LacI, HTH motif | chromosome I | CDS | 531844 | 588 | + | 0.588435 |
NA | BAB1_0558 | Transposase, IS4 | chromosome I | CDS | 546308 | 417 | + | 0.577938 |
NA | BAB1_0596 | DnaA domain protein | chromosome I | CDS | 583790 | 456 | + | 0.570175 |
NA | BAB1_0684 | Cytochrome P450:Recombination protein O, RecO | chromosome I | CDS | 671410 | 744 | + | 0.590054 |
NA | BAB1_0121 | Lipocalin-related protein and Bos/Can/Equ allergen:ATP-dependent helicase, DEAD-box:DEAD/DEAH box helicase:Helicase, C-termin... | chromosome I | CDS | 135761 | 1881 | + | 0.602871 |
NA | BAB1_0983 | Phage integrase | chromosome I | CDS | 953925 | 1026 | - | 0.507797 |
NA | BAB1_1128 | Cytochrome c heme-binding site:ATP/GTP-binding site motif A (P-loop):ABC transporter:Excinuclease ABC, A subunit | chromosome I | CDS | 1092053 | 2925 | + | 0.58359 |
NA | BAB1_0292 | Site-specific recombinase:Resolvase, N-terminal | chromosome I | CDS | 287106 | 618 | + | 0.582524 |
NA | BAB1_0538 | transposase | chromosome I | CDS | 533445 | 303 | + | 0.574257 |
NA | BAB1_0720 | Excinuclease ABC, C subunit, N-terminal:Helix-hairpin-helix motif:Excinuclease ABC, C subunit, C-terminal:UvrB/UvrC protein:H... | chromosome I | CDS | 703090 | 1836 | - | 0.592048 |
NA | BAB1_0288 | Phage integrase:Phage integrase, N-terminal SAM-like | chromosome I | CDS | 284035 | 1755 | + | 0.556695 |
NA | BAB1_0658 | Phage integrase:Phage integrase, N-terminal SAM-like | chromosome I | CDS | 647277 | 927 | - | 0.522114 |
NA | BAB1_0165 | Helix-hairpin-helix motif:HhH-GPD:Helix-hairpin-helix DNA-binding, class 1:Endonuclease III, HhH:Endonuclease III/Nth | chromosome I | CDS | 177611 | 747 | + | 0.605087 |
NA | BAB1_2004 | AP endonuclease, family 1:Exodeoxyribonuclease III xth:Endonuclease/exonuclease/phosphatase family | chromosome I | CDS | 1940844 | 807 | + | 0.583643 |
NA | BAB1_1126 | Single-strand binding protein | chromosome I | CDS | 1090648 | 507 | - | 0.564103 |
NA | BAB1_0185 | Methylated-DNA-[protein]-cysteineS-methyltransfe rase | chromosome I | CDS | 193069 | 579 | - | 0.594128 |
NA | BAB1_1571 | NUDIX hydrolase | chromosome I | CDS | 1518386 | 507 | - | 0.607495 |
NA | BAB1_0134 | Transposase, IS4 | chromosome I | CDS | 148297 | 393 | + | 0.506361 |
NA | BAB1_2105 | UvrD/REP helicase:ATP/GTP-binding site motif A (P-loop) | chromosome I | CDS | 2041045 | 3543 | + | 0.614169 |
NA | BAB1_0003 | RecF protein:ATP/GTP-binding site motif A (P-loop):Aldehyde dehydrogenase:SMC protein, N-terminal:AAA ATPase | chromosome I | CDS | 3878 | 1155 | + | 0.613853 |
NA | BAB1_1129 | Histone-like bacterial DNA-binding protein | chromosome I | CDS | 1095164 | 276 | - | 0.605072 |
NA | BAB1_0741 | Exonuclease | chromosome I | CDS | 725049 | 612 | - | 0.531046 |
NA | BAB1_2104 | conserved hypothetical protein | chromosome I | CDS | 2037890 | 3159 | + | 0.629313 |
NA | BAB1_1100 | Phage integrase | chromosome I | CDS | 1062675 | 1245 | + | 0.538153 |
NA | BAB1_1511 | NUDIX hydrolase | chromosome I | CDS | 1465086 | 462 | + | 0.551948 |
NA | BAB1_0066 | Immunoglobulin/major histocompatibility complex:Phosphoesterase PHP, N-terminal:DNA polymerase III alpha subunit | chromosome I | CDS | 68900 | 3234 | - | 0.603896 |
NA | BAB1_0555 | IS5 family element, transposase orfB | chromosome I | CDS | 544813 | 342 | + | 0.473684 |
NA | BAB1_1661 | HhH-GPD | chromosome I | CDS | 1610388 | 699 | - | 0.636624 |
NA | BAB1_1228 | Shikimate kinase:Replication factor C conserved domain:ATP/GTP-binding site motif A (P-loop):AAA ATPase:AAA ATPase, central r... | chromosome I | CDS | 1198296 | 1314 | - | 0.598935 |
NA | BAB1_2032 | Phage integrase:Phage integrase, N-terminal SAM-like | chromosome I | CDS | 1969667 | 924 | + | 0.59632 |
NA | BAB1_0546 | ISBm1, transposase orfA | chromosome I | CDS | 540431 | 429 | + | 0.60373 |
NA | BAB1_1015 | TatD-related deoxyribonuclease | chromosome I | CDS | 975948 | 792 | + | 0.558081 |
NA | BAB1_0551 | Transposase, IS4 | chromosome I | CDS | 542410 | 393 | + | 0.513995 |
NA | BAB1_0711 | DNA polymerase III chi subunit, HolC | chromosome I | CDS | 696305 | 450 | + | 0.562222 |
NA | BAB1_1499 | Mitochondrial substrate carrier:Zn-finger, CHC2 type:Toprim sub-domain:TOPRIM:DNA primase:Toprim, primase | chromosome I | CDS | 1449838 | 1968 | - | 0.616362 |
NA | BAB1_2184 | Formamidopyrimidine-DNA glycolase:Formamidopyrimidine-DNA glycolase, zinc binding domain:Sugar transporter superfamily | chromosome I | CDS | 2118770 | 882 | + | 0.60771 |
NA | BAB1_0539 | Integrase, catalytic domain | chromosome I | CDS | 533719 | 450 | + | 0.564444 |
NA | BAB1_0178 | Protein of unknown function UPF0102 | chromosome I | CDS | 187338 | 381 | + | 0.614173 |
NA | BAB1_0937 | Transposase, IS4 | chromosome I | CDS | 911469 | 393 | + | 0.516539 |
NA | BAB1_0935 | IS711, transposase orfB | chromosome I | CDS | 910625 | 393 | + | 0.506361 |
NA | BAB1_1580 | NUDIX hydrolase | chromosome I | CDS | 1529432 | 456 | - | 0.535088 |
NA | BAB1_1863 | transposase, putative | chromosome I | CDS | 1799866 | 687 | - | 0.480349 |
NA | BAB1_1406 | ATP/GTP-binding site motif A (P-loop) | chromosome I | CDS | 1356371 | 1122 | - | 0.58467 |
NA | BAB1_0955 | ATP-dependent helicase, DEAD-box:DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop) | chromosome I | CDS | 930684 | 1449 | + | 0.57833 |
NA | BAB1_0888 | conserved hypothetical protein | chromosome I | pseudo | 859451 | 672 | - | 0.584821 |
NA | BAB1_1394 | NUDIX hydrolase | chromosome I | CDS | 1346515 | 732 | - | 0.588798 |
NA | BAB1_1493 | Phage integrase | chromosome I | CDS | 1443962 | 495 | + | 0.549495 |
NA | BAB1_0120 | 5'3'-Exonuclease N-and I-domain:DNA-directed DNA polymerase:DNA polymerase, family A:5'-3' exonuclease:3'-5' exonuclease:Hel... | chromosome I | CDS | 132683 | 2937 | + | 0.593463 |
NA | BAB1_0475 | ATP/GTP-binding site motif A (P-loop):AAA ATPase:Site-specific recombinase:DnaB helicase:DnaB-like helicase, N-terminal:DnaB-... | chromosome I | CDS | 468105 | 1506 | - | 0.585657 |
NA | BAB1_0033 | NUDIX hydrolase | chromosome I | CDS | 37525 | 948 | + | 0.600211 |
NA | BAB1_1432 | UvrD/REP helicase:ATP/GTP-binding site motif A (P-loop) | chromosome I | CDS | 1380893 | 2577 | + | 0.593714 |
NA | BAB1_0733 | ATP/GTP-binding site motif A (P-loop):Protein of unknown function UPF0118 | chromosome I | CDS | 716153 | 1884 | + | 0.577495 |
NA | BAB1_1072 | ATP-dependent helicase, DEAD-box:DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop) | chromosome I | CDS | 1037006 | 1596 | + | 0.619674 |
NA | BAB1_0250 | Phage integrase | chromosome I | CDS | 256826 | 1197 | + | 0.55472 |
NA | BAB1_0067 | conserved hypothetical protein | chromosome I | CDS | 72133 | 1452 | - | 0.650138 |
NA | BAB1_1859 | transposase, putative | chromosome I | CDS | 1795781 | 687 | + | 0.480349 |
NA | BAB1_1104 | Site-specific recombinase:Resolvase, N-terminal | chromosome I | CDS | 1067807 | 618 | - | 0.582524 |
NA | BAB1_1781 | DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop):Aldehyde dehydrogenase | chromosome I | CDS | 1712714 | 3087 | - | 0.615808 |
NA | BAB1_0644 | ATP/GTP-binding site motif A (P-loop):Uracil-DNA glycosylase superfamily:Phage SPO1 DNA polymerase-related protein | chromosome I | CDS | 635061 | 873 | - | 0.61512 |
NA | BAB1_0001 | ATP/GTP-binding site motif A (P-loop):Bacterial chromosomal replication initiator protein, DnaA:AAA ATPase:Neutral zinc metal... | chromosome I | CDS | 784 | 1491 | + | 0.60228 |
NA | BAB1_0527 | conserved hypothetical protein | chromosome I | CDS | 522152 | 387 | - | 0.578811 |
NA | BAB1_1065 | NUDIX hydrolase | chromosome I | CDS | 1031260 | 489 | - | 0.595092 |
NA | BAB1_0547 | transposase | chromosome I | CDS | 540778 | 375 | + | 0.592 |
NA | BAB1_0122 | Topoisomerase IV, subunit B:DNA gyrase, subunit B:DNA topoisomerase II:DNA gyrase, subunit B, C-terminal:ATP-binding region, ... | chromosome I | CDS | 137737 | 2433 | - | 0.598438 |
NA | BAB1_0416 | Protein of unknown function DUF85:Elongator protein 3/MiaB/NifB:Radical SAM | chromosome I | CDS | 413992 | 1173 | - | 0.611253 |
NA | BAB1_0398 | Helix-turn-helix, AraC type:Methylated-DNA-[protein]-cysteine S-methyltransferase:Metal binding domain of Ada | chromosome I | CDS | 397494 | 1086 | + | 0.593923 |
babI | BAB1_0516 | SAM (and some other nucleotide) binding motif:Site-specific DNA-methyltransferase (cytosine-N4-specific):N-6 Adenine-specific... | chromosome I | CDS | 508413 | 1134 | + | 0.599647 |
dnaN | BAB1_0002 | DNA polymerase III, beta chain:Inorganic pyrophosphatase | chromosome I | CDS | 2503 | 1194 | + | 0.587102 |
dnaQ | BAB1_2072 | Beta tubulin:DNA polymerase III, epsilon subunit:Exonuclease:DNA polymerase 3, epsilon subunit | chromosome I | CDS | 2011028 | 705 | + | 0.578723 |
gyrA | BAB1_1121 | DNA gyrase/topoisomerase IV, subunit A:DNA gyrase, subunit A:DNA gyrase C-terminal repeat, beta-propeller | chromosome I | CDS | 1084646 | 2769 | - | 0.589382 |
himA | BAB1_0799 | Histone-like bacterial DNA-binding protein:Integration host factor, alpha subunit | chromosome I | CDS | 780478 | 324 | + | 0.527778 |
ialA | BAB1_1844 | NUDIX hydrolase | chromosome I | CDS | 1781826 | 549 | - | 0.601093 |
ihfB | BAB1_0152 | Histone-like bacterial DNA-binding protein:Integration host factor, beta subunit | chromosome I | CDS | 167894 | 285 | - | 0.568421 |
ligA | BAB1_1439 | BRCT domain:NAD-dependent DNA ligase:ATP/GTP-binding site motif A (P-loop):Zn-finger in NAD-dependent DNA ligase, C4 type:NAD... | chromosome I | CDS | 1388965 | 2160 | - | 0.599537 |
parC | BAB1_0777 | DNA gyrase/topoisomerase IV, subunit A:Gram negative topoisomerase IV, subunit A:DNA gyrase C-terminal repeat, beta-propeller | chromosome I | CDS | 759218 | 2313 | + | 0.580631 |
priA | BAB1_1812 | DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop):Primosomal protein n | chromosome I | CDS | 1745912 | 2235 | - | 0.624609 |
radC | BAB1_1301 | DNA repair protein RadC | chromosome I | CDS | 1258929 | 750 | + | 0.604 |
recA | BAB1_1224 | RecA bacterial DNA recombination protein:ATP/GTP-binding site motif A (P-loop):AAA ATPase | chromosome I | CDS | 1195423 | 1086 | - | 0.569982 |
recJ | BAB1_1290 | Phosphoesterase, RecJ-like:Phosphoesterase, DHHA1:Bacterial RecJ exonuclease | chromosome I | CDS | 1246614 | 1785 | - | 0.615686 |
recN | BAB1_1440 | ATP/GTP-binding site motif A (P-loop):ABC transporter:DNA repair protein RecN | chromosome I | CDS | 1391310 | 1680 | - | 0.622619 |
recR | BAB1_0029 | RecR protein:Toprim sub-domain:TOPRIM | chromosome I | CDS | 33918 | 606 | - | 0.607261 |
rnhA | BAB1_0503 | RNase H | chromosome I | CDS | 493063 | 465 | + | 0.597849 |
rnhB | BAB1_0415 | Ribonuclease HII/HIII | chromosome I | CDS | 413153 | 663 | - | 0.624434 |
ruvA | BAB1_1715 | Bacterial DNA recombination protein, RuvA:Helix-hairpin-helix DNA-binding, class 1 | chromosome I | CDS | 1660803 | 618 | - | 0.613269 |
ruvB | BAB1_1714 | CbxX/CfqX superfamily:Disease resistance protein:ATP/GTP-binding site motif A (P-loop):AAA ATPase:AAA ATPase, central region:... | chromosome I | CDS | 1659722 | 1041 | - | 0.615754 |
uvrB | BAB1_1530 | DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop):UvrB/UvrC protein:Excinuclease ABC, B subunit | chromosome I | CDS | 1479947 | 2823 | + | 0.602196 |
xerC | BAB1_1916 | Phage integrase:Phage integrase, N-terminal SAM-like | chromosome I | CDS | 1862311 | 948 | + | 0.627637 |
xseB | BAB1_0457 | Exonuclease VII, small subunit | chromosome I | CDS | 449807 | 255 | + | 0.568627 |
xth-1 | BAB1_0892 | AP endonuclease, family 1:Exodeoxyribonuclease III xth:Endonuclease/exonuclease/phosphatase family | chromosome I | CDS | 862270 | 783 | - | 0.546616 |