Gene list
Applied filters:
COG category: Replication, recombination and repair
Genomic element: pHCM1
Number of genes found: 30
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
HCM1.103 | putative DNA helicase | pHCM1 | CDS | 78416 | 2040 | + | 0.504902 | |
HCM1.134c | putative recombinase | pHCM1 | CDS | 104515 | 1182 | - | 0.50423 | |
HCM1.162c | putative transposase | pHCM1 | CDS | 119023 | 765 | - | 0.610458 | |
HCM1.187c | putative DNA modification methylase | pHCM1 | CDS | 137517 | 1428 | - | 0.489496 | |
HCM1.188 | putative nuclease | pHCM1 | CDS | 139168 | 516 | + | 0.484496 | |
HCM1.194 | transposase | pHCM1 | CDS | 143085 | 1209 | + | 0.450786 | |
HCM1.201 | putative transposase | pHCM1 | CDS | 151052 | 1398 | + | 0.528612 | |
HCM1.209c | putative transposase | pHCM1 | CDS | 156075 | 1005 | - | 0.481592 | |
HCM1.213c | putative transposase | pHCM1 | CDS | 160707 | 705 | - | 0.530496 | |
HCM1.219 | putative transposase | pHCM1 | CDS | 163369 | 705 | + | 0.531915 | |
HCM1.236 | putative transposase | pHCM1 | CDS | 175403 | 1005 | + | 0.490547 | |
HCM1.249c | transposase | pHCM1 | CDS | 183230 | 1209 | - | 0.450786 | |
HCM1.57c | hypothetical protein | pHCM1 | CDS | 34194 | 1755 | - | 0.501994 | |
HCM1.59 | putative DNA modification methylase | pHCM1 | CDS | 37651 | 825 | + | 0.476364 | |
insA | putative IS1 transposase | pHCM1 | CDS | 108842 | 276 | + | 0.532609 | |
insA | putative IS1 transposase | pHCM1 | CDS | 106430 | 276 | + | 0.528986 | |
insA | putative IS1 transposase | pHCM1 | CDS | 177180 | 276 | - | 0.536232 | |
insA | putative IS1 transposase | pHCM1 | CDS | 2265 | 276 | - | 0.528986 | |
insA | putative IS1 transposase | pHCM1 | CDS | 153973 | 276 | - | 0.536232 | |
insB | putative IS1 transposase | pHCM1 | CDS | 1876 | 471 | - | 0.545648 | |
insB | putative IS1 transposase | pHCM1 | CDS | 106624 | 504 | + | 0.547619 | |
insB | putative IS1 transposase | pHCM1 | CDS | 176758 | 504 | - | 0.551587 | |
insB | putative IS1 transposase | pHCM1 | CDS | 153551 | 504 | - | 0.551587 | |
insB | putative IS1 transposase | pHCM1 | CDS | 109036 | 504 | + | 0.545635 | |
int | putative integrase | pHCM1 | CDS | 121046 | 1014 | + | 0.61144 | |
mucB | putative DNA-repair modulator | pHCM1 | CDS | 186216 | 1260 | + | 0.525397 | |
rep | putative replication initiation protein | pHCM1 | CDS | 107709 | 756 | + | 0.480159 | |
tnpA | transposase | pHCM1 | CDS | 122925 | 2973 | + | 0.60444 | |
tnpR | resolvase | pHCM1 | CDS | 122365 | 558 | + | 0.611111 | |
trhI | putative DNA helicase | pHCM1 | CDS | 82216 | 1857 | + | 0.436187 |