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2024-05-18 22:39:38

Gene list

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COG category: Replication, recombination and repair
Genomic element: megaplasmid

Number of genes found: 44

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shewanella oneidensis MR-1, MR-1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
SOA0004 type II DNA modification methyltransferasemegaplasmid CDS3938 1713 - 0.332166
SOA0016 ISSod9, transposasemegaplasmid CDS12945 2967 - 0.557465
SOA0019 ISSod9, DNA-invertasemegaplasmid CDS16733 558 + 0.514337
SOA0024 ISSod1, transposase OrfBmegaplasmid CDS19523 810 - 0.45679
SOA0025 ISSod1, transposase OrfAmegaplasmid CDS20392 291 - 0.436426
SOA0026 site-specific recombinase, resolvase familymegaplasmid CDS20759 309 - 0.449838
SOA0028 ISSod1, transposase OrfAmegaplasmid CDS21138 291 + 0.439863
SOA0029 ISSod1, transposase OrfBmegaplasmid CDS21488 810 + 0.45679
SOA0035 ISSod4, transposasemegaplasmid CDS26127 1203 - 0.428096
SOA0037 ISSod1, transposase OrfBmegaplasmid CDS28346 810 - 0.45679
SOA0038 ISSod1, transposase OrfAmegaplasmid CDS29215 291 - 0.439863
SOA0044 site-specific recombinase, phage integrase familymegaplasmid CDS32496 1131 + 0.471264
SOA0045 site-specific recombinase, phage integrase familymegaplasmid CDS33728 1266 + 0.462085
SOA0053 ISSod1, transposase OrfAmegaplasmid CDS45061 291 + 0.439863
SOA0054 ISSod1, transposase OrfBmegaplasmid CDS45411 810 + 0.45679
SOA0063 ISSod8, transposasemegaplasmid CDS50928 558 + 0.415771
SOA0065 ISSod1, transposase OrfAmegaplasmid CDS52829 291 + 0.436426
SOA0066 ISSod1, transposase OrfBmegaplasmid CDS53179 810 + 0.45679
SOA0074 ISSod6, transposasemegaplasmid CDS58734 759 - 0.433465
SOA0077 site-specific recombinase, resolvase familymegaplasmid CDS60346 636 - 0.443396
SOA0083 ISSod4, transposasemegaplasmid CDS63339 1203 + 0.432253
SOA0085 ISSod8, transposasemegaplasmid CDS65906 546 - 0.415751
SOA0086 site-specific recombinase, resolvase familymegaplasmid CDS66535 591 - 0.43824
SOA0090 ISSod1, transposase OrfAmegaplasmid CDS69314 291 + 0.436426
SOA0091 ISSod1, transposase OrfBmegaplasmid CDS69664 810 + 0.45679
SOA0097 ISSod6, transposasemegaplasmid CDS75737 759 - 0.429513
SOA0102 ISSod3, transposasemegaplasmid CDS82906 1209 + 0.468983
SOA0105 ISSod8, transposasemegaplasmid CDS84452 558 + 0.417563
SOA0118 conserved domain proteinmegaplasmid CDS105531 564 + 0.482269
SOA0119 ISSod13, transposasemegaplasmid CDS106554 1041 + 0.474544
SOA0123 conserved domain proteinmegaplasmid CDS109721 210 - 0.404762
SOA0129 transposase, IS3 familymegaplasmid CDS113440 840 + 0.465476
SOA0130 ISSod4, transposasemegaplasmid CDS114492 1203 - 0.429759
SOA0136 ISSod3, transposasemegaplasmid CDS120598 1209 - 0.468983
SOA0142 ISSod13, transposasemegaplasmid CDS130884 1041 + 0.474544
SOA0144 ISSod4, transposasemegaplasmid CDS132330 1203 + 0.432253
SOA0145 ISSod1, transposase OrfBmegaplasmid CDS133536 645 - 0.477519
SOA0146 ISSod1, transposase OrfAmegaplasmid CDS134240 291 - 0.439863
SOA0151 ISSod13, transposasemegaplasmid CDS138290 1041 - 0.474544
SOA0162 ISSod6, transposasemegaplasmid CDS150372 759 - 0.428195
SOA0167 ISSod9, transposasemegaplasmid CDS155302 2967 - 0.557465
SOA0170 ISSod9, DNA-invertasemegaplasmid CDS159090 558 + 0.514337
SOA0172 site-specific recombinase, resolvase familymegaplasmid CDS160178 627 - 0.45614
umuC umuC proteinmegaplasmid CDS10078 1257 - 0.488465