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2024-05-19 01:47:55

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome

Number of genes found: 164

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bacillus subtilis phage PBSX
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BL01925 hypothetical proteinchromosome CDS4000806 666 - 0.412913
NA BL02881 hypothetical proteinchromosome CDS1030988 402 + 0.440298
NA BL03620 Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic corechromosome CDS3467821 1095 + 0.357078
NA BL05315 transposase, part of IS elementchromosome CDS3195275 861 - 0.358885
NA BL00548 hypothetical proteinchromosome CDS934397 441 - 0.312925
NA BL05232 Probable ATP-dependent helicasechromosome CDS2296686 1920 - 0.471875
NA BL05319 putative transposase,part of IS elementchromosome CDS3207175 861 + 0.358885
NA BL01838 transposase proteinchromosome CDS432608 1626 - 0.441574
NA BL01100 conserved hypothetical proteinchromosome CDS1135366 1266 + 0.418641
NA BL00970 phage related proteinchromosome CDS1449940 498 + 0.439759
NA BL02863 conserved hypothetical proteinchromosome CDS1068885 1227 + 0.484923
NA BL05303 putative transposase part of IS elementchromosome CDS2988586 861 + 0.358885
NA BL00551 hypothetical proteinchromosome CDS1603414 378 - 0.383598
NA BL05135 Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic corechromosome CDS1504014 1059 + 0.384325
NA BL01003 DNA binding, phage related proteinchromosome CDS1430411 822 + 0.419708
NA BL01491 hypothetical proteinchromosome CDS713353 417 + 0.438849
NA BL00369 putative transposasechromosome CDS1636925 861 - 0.358885
NA BL02740 hypothetical proteinchromosome CDS2309048 399 - 0.488722
NA BL00144 putative transposase, part of IS elementchromosome CDS530126 861 - 0.358885
NA BL02708 hypothetical proteinchromosome CDS193051 420 + 0.435714
NA BL03221 hypothetical proteinchromosome CDS1958475 477 + 0.429769
NA BL02048 hypothetical proteinchromosome CDS2683470 708 - 0.444915
NA BL01373 Lambda integrase-like protein(phage related)chromosome CDS1421737 1140 - 0.371053
NA BL03626 ATP-dependent DNA ligasechromosome CDS1465049 1851 - 0.468395
NA BL05291 hypothetical proteinchromosome CDS2794638 180 + 0.438889
NA BL05189 Resolvase, N-terminal domain-putative recombinasechromosome CDS1977035 648 + 0.515432
NA BL05247 putative transposase part of IS elementchromosome CDS2415766 861 + 0.358885
NA BL01615 putative transcription factor,conserved hypotheticalchromosome CDS1630747 669 + 0.443946
NA BL03494 hypothetical phagelike proteinchromosome CDS3457991 372 - 0.290323
NA BL01004 phage related proteinchromosome CDS1429590 804 + 0.477612
NA BL01000 nucleotide binding phage related proteinchromosome CDS1431939 981 + 0.428135
NA BL01001 hypothetical phage related,DNA binding proteinchromosome CDS1431362 708 + 0.432203
NA BL02880 hypothetical proteinchromosome CDS1031605 288 + 0.440972
NA BL01400 hypothetical proteinchromosome CDS2177450 966 - 0.302277
NA BL02559 hypothetical proteinchromosome CDS3126375 996 - 0.432731
NA BL03698 DEAD/DEAH box ATP dependent helicasechromosome CDS2592222 1320 - 0.466667
NA BL05156 DNA-binding domain proteinchromosome CDS1679006 600 + 0.463333
NA BL01719 Tyrosine protein kinasechromosome CDS366446 804 + 0.49005
NA BL01397 hypothetical proteinchromosome CDS2182836 255 - 0.301961
NA BL01945 putative DNA Gyrase inhibitorchromosome CDS4027901 450 - 0.393333
NA BL04014 putative integrasechromosome CDS3736304 861 - 0.358885
NA BL01304 ATP-dependent DNA helicasechromosome CDS2172693 1782 - 0.473625
NA BL03492 hypothetical phagelike proteinchromosome CDS3461216 438 - 0.449772
NA BL00991 single-strand DNA-binding proteinchromosome CDS1436116 285 + 0.424561
NA BL05217 putative transposase, part of IS elementchromosome CDS2236343 861 + 0.358885
NA BL00994 phage related proteinchromosome CDS1435255 423 + 0.449173
NA BL05295 hypothetical proteinchromosome CDS2858653 276 - 0.387681
NA BL02990 Adenine-specific DNA methylasechromosome CDS1673027 567 + 0.518519
NA BL02735 conserved hypothetical proteinchromosome CDS2302947 1314 - 0.496956
NA BL05335 putative integrasechromosome CDS3425168 861 - 0.358885
NA BL02221 putative metallopeptidasechromosome CDS2366963 1353 - 0.433851
NA BL05230 hypothetical proteinchromosome CDS2283094 660 - 0.463636
NA BL03500 Phage terminase like, small subunit proteinchromosome CDS3452873 516 - 0.428295
NA BL03551 putative integrase/recombinasechromosome CDS1505081 717 + 0.379358
adaB BL00477 O6-methylguanine-DNA methyltransferasechromosome CDS2722281 528 + 0.534091
addA BL01350 ATP-dependent deoxyribonuclease (subunit A)chromosome CDS1163600 3693 + 0.511779
addB BL01351 ATP-dependent deoxyribonuclease (subunit B)chromosome CDS1160113 3501 + 0.488717
comEA BL02085 ComEAchromosome CDS2647892 630 - 0.485714
comFA BL03363 late competence proteinchromosome CDS3608018 1401 - 0.479657
deaD BL00221 ATP-dependent RNA helicasechromosome CDS4056332 1446 - 0.475104
dinB1 BL01384 UMUC-like DNA-repair protein DinB1chromosome CDS2486294 1257 - 0.497216
dinG BL02749 ATP-dependent helicasechromosome CDS2319405 2793 - 0.478697
dnaA BL00076 DnaAchromosome CDS507 1341 + 0.431767
dnaB BL00386 membrane attachment proteinchromosome CDS2931791 1425 - 0.478596
dnaC BL01376 replicative DNA helicasechromosome CDS4190025 1365 - 0.498168
dnaD BL02744 DnaDchromosome CDS2315166 699 - 0.424893
dnaE BL00408 DNA polymerase III (alpha subunit)chromosome CDS2958757 3345 - 0.499253
dnaG BL03681 DNA primasechromosome CDS2607765 1824 - 0.468202
dnaI BL00385 helicase loaderchromosome CDS2930841 933 - 0.473741
dnaN BL00077 DNA polymerase III (beta subunit)chromosome CDS2024 1137 + 0.44591
dnaX BL02357 DNA polymerase III (gamma and tau subunits)chromosome CDS31166 1614 + 0.47088
fliT BL03378 flagellar proteinchromosome CDS3598064 342 - 0.497076
gerPC BL01319 spore germination proteinchromosome CDS1172804 606 - 0.481848
gyrA BL00082 DNA gyrase (subunit A)chromosome CDS7095 2469 + 0.465776
gyrB BL00081 DNA gyrase (subunit B)chromosome CDS4985 1920 + 0.472396
hbs BL02787 non-specific DNA-binding protein HBsu signal recognition particle-like (SRP) componentchromosome CDS2355336 279 - 0.394265
holA BL02088 DNA polymerase III clamp loader subunit, C-terminalchromosome CDS2643434 1065 - 0.466667
holB BL00541 DNA polymerase III (delta' subunit)chromosome CDS45133 990 + 0.432323
ligA BL00589 DNA ligasechromosome CDS720422 2004 + 0.509481
ligB BL00865 DNA ligase,phage relatedchromosome CDS1508614 810 - 0.490123
mfd BL00515 transcription-repair coupling factorchromosome CDS65176 3534 + 0.468025
mtbP BL00763 modification methylase Bsuchromosome CDS2858903 717 - 0.430962
mutL BL03664 MutLchromosome CDS1889998 1911 + 0.5191
mutM BL00393 formamidopyrimidine-DNA glycosidasechromosome CDS2939264 828 - 0.491546
mutS BL03663 MutSchromosome CDS1887371 2610 + 0.490421
mutSB BL00333 DNA mismatch repair protein MutSBchromosome CDS2886193 2358 - 0.501272
mutT BL01963 mutator proteinchromosome CDS2196108 474 - 0.343882
nfo BL03699 type IV apurinic/apyrimidinic endonucleasechromosome CDS2591317 894 - 0.465324
nth BL02743 endonuclease IIIchromosome CDS2314487 663 - 0.464555
nudF BL05253 ADP-ribose pyrophosphatasechromosome CDS2438748 567 - 0.485009
ogt BL03537 O6-methylguanine DNA alkyltransferasechromosome CDS1483445 498 + 0.48996
parC BL01185 subunit of DNA topoisomerase IVchromosome CDS1996005 2424 + 0.47566
parE BL01186 subunit of DNA topoisomerase IVchromosome CDS1994033 1968 + 0.479675
pcrA BL00588 ATP-dependent DNA helicasechromosome CDS718169 2220 + 0.502703
pgsB BL02478 poly-gamma-glutamate synthesis proteinchromosome CDS3666244 1182 - 0.457699
polA BL00394 DNA polymerase Ichromosome CDS2940110 2640 - 0.478409
polC BL01234 DNA polymerase III (alpha subunit)chromosome CDS1831641 4317 + 0.485754
priA BL02296 primosomal replication factor Y (primosomal protein N')chromosome CDS1748879 2418 + 0.498759
radC BL00636 DNA repair proteinchromosome CDS2814924 675 - 0.482963
recA BL05164 multifunctional SOS repair regulatorchromosome CDS1876690 1047 + 0.514804
recF BL00079 DNA repair RecFchromosome CDS3559 1113 + 0.427673
recG BL02311 ATP-dependent DNA helicasechromosome CDS1764754 2049 + 0.506101
recJ BL01127 RecJ exonucleasechromosome CDS2778043 2349 - 0.487441
recN BL01520 RecNchromosome CDS2513579 1731 - 0.47487
recO BL03675 RecOchromosome CDS2615302 771 - 0.476005
recR BL02359 DNA repair protein RecRchromosome CDS33143 597 + 0.443886
ripX BL00771 site-specific integrase/recombinasechromosome CDS2430080 891 - 0.510662
rnhA BL00670 putative ribonuclease Hchromosome CDS2284520 399 + 0.496241
rnhB BL01288 ribonuclease HIIchromosome CDS1781813 768 + 0.50651
rnhC BL00302 ribonuclease HIIIchromosome CDS2891378 942 + 0.505308
rnmV BL00530 ribonuclease M5chromosome CDS54564 561 + 0.486631
ruvA BL01144 Holliday junction DNA helicasechromosome CDS2790294 606 - 0.452145
ruvB BL01143 Holliday junction DNA helicasechromosome CDS2789280 1005 - 0.527363
sbcC BL01348 ABC transporter, exonuclease SbcCchromosome CDS1168535 3393 + 0.508989
sbcD BL01349 exonuclease SbcDchromosome CDS1167357 1182 + 0.533841
smf BL01283 DNA processing Smf protein homologchromosome CDS1786943 903 + 0.506091
splB BL03571 spore photoproduct (thymine dimer) lyasechromosome CDS1565753 1044 + 0.468391
spoIVCA BL02390 site-specific DNA recombinasechromosome CDS4173904 1245 + 0.359036
ssb BL00099 single-strand DNA-binding proteinchromosome CDS4206965 513 - 0.487329
topA BL01281 DNA topoisomerase Ichromosome CDS1788050 2076 + 0.473507
topB BL02823 DNA topoisomerase IIIchromosome CDS522704 2193 + 0.503876
ung BL03895 uracil-DNA glycosylasechromosome CDS3835223 678 - 0.458702
uvrA BL03395 excinuclease ABC (subunit A)chromosome CDS3577528 2874 - 0.508003
uvrB BL03394 excinuclease ABC (subunit B)chromosome CDS3580409 1986 - 0.499496
uvrC BL00325 excinuclease ABC (subunit C)chromosome CDS2878084 1773 - 0.473209
uvrX BL00801 UV-damage repair protein UvrXchromosome CDS2454507 1263 - 0.538401
xerC BL01279 site-specific integrase/recombinasechromosome CDS1791572 915 + 0.421858
xkdC BL03834 phage related proteinchromosome CDS1319541 801 + 0.49563
xseA BL01526 Exonuclease VII, large subunitchromosome CDS2520066 1350 - 0.471852
xseB BL01525 Exonuclease VII, small subunitchromosome CDS2519813 261 - 0.452107
xtmA BL03830 putative phage terminase (small subunit)chromosome CDS1321920 801 + 0.478152
yabD BL00532 putative TatD-related deoxyribonuclease YabDchromosome CDS52187 768 + 0.451823
yabT BL00504 putative serine/threonine-protein kinasechromosome CDS78586 1035 + 0.485024
yazA BL00536 putative Excinuclease ABC, C subunit, N-terminal YazAchromosome CDS48124 294 + 0.442177
ycqG BL01823 Endoplasmic reticulum targeting sequence YcqGchromosome CDS369069 741 - 0.414305
ydbR BL02197 probable ATP-dependent RNA helicase YdbRchromosome CDS552440 1464 + 0.480874
ydcL BL00575 Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic corechromosome CDS1540515 1146 + 0.433682
yfhH BL03033 conserved protein YfhHchromosome CDS896953 315 + 0.469841
yfhJ BL03034 conserved protein YfhJchromosome CDS897776 270 + 0.488889
yfhQ BL03038 putative A/G-specific adenine glycosylase YfhQchromosome CDS903849 1086 + 0.469613
yfjP BL03090 putative DNA glycosylasechromosome CDS849934 864 + 0.478009
yfjT BL03087 conserved protein YfjTchromosome CDS845635 186 + 0.392473
yfmL BL00960 putative ATP binding helicasechromosome CDS788384 1131 + 0.487179
yjcD BL02667 putative ATP-dependent DNA helicase YjcDchromosome CDS1281563 2280 - 0.486842
ypcP BL00671 putative 5'-3' exonucleasechromosome CDS2285118 888 - 0.467342
ypsC BL05234 Putative RNA methylasechromosome CDS2299706 1152 - 0.490451
yqhH BL01550 DEAD/DEAH box helicase YqhHchromosome CDS2546805 1680 + 0.455952
yrrC BL02037 putative exodeoxyribonuclease V alpha subunit YrrCchromosome CDS2760242 2400 - 0.485417
yrrK BL02031 conserved protein YrrKchromosome CDS2754423 420 - 0.495238
yrvN BL05286 Replication factor C conserved domainchromosome CDS2766808 1266 + 0.513428
yrzF BL01135 probable serine/threonine-protein kinase YrzFchromosome CDS2791786 651 + 0.414747
yslB BL00301 conserved protein YslBchromosome CDS2875973 444 + 0.477477
ytkD BL03288 putative hydrolase YtkDchromosome CDS3087615 477 - 0.427673
ytrI BL00364 conserved protein YtrIchromosome CDS2962579 504 + 0.428571
yttA BL00063 YttAchromosome CDS3063671 681 + 0.450808
ytxK BL00420 putative RNA methylase YtxKchromosome CDS2973728 987 - 0.481256
yurYA BL02127 extracellular ribonucleasechromosome CDS3285687 813 + 0.516605
yusF BL02174 conserved nucleic acid binding protein YusFchromosome CDS3303433 345 - 0.449275
yvcI BL03416 NUDIX hydrolasechromosome CDS3551538 465 - 0.511828
yvyG BL03368 YvyGchromosome CDS3605669 477 - 0.486373
ywpH BL02493 Single-strand binding proteinchromosome CDS3695060 348 - 0.508621
ywqA BL02449 putative helicase YwqAchromosome CDS3685015 2766 + 0.482285
ywqH BL03684 YwqHchromosome CDS2604917 444 - 0.459459
yxlJ BL05369 Methylpurine-DNA glycosylase (MPG)chromosome CDS3916338 591 - 0.524535