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2024-05-17 11:22:08

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome

Number of genes found: 210

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bacillus cereus E33L, E33L
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BCE33L1116 probable integral membrane proteinchromosome CDS1223659 360 + 0.341667
NA BCE33L1532 group-specific proteinchromosome CDS1618354 486 + 0.343621
NA BCE33L4382 possible adenine-specific DNA methyltransferasechromosome CDS4490632 993 - 0.362538
NA BCE33L1534 conserved hypothetical proteinchromosome CDS1620497 960 + 0.314583
NA BCE33L1527 conserved hypothetical proteinchromosome CDS1614256 411 + 0.309002
NA BCE33L2909 possible DNA helicasechromosome CDS3037631 2280 - 0.388597
NA BCE33L1792 conserved hypothetical protein; possible lipoproteinchromosome CDS1918787 657 + 0.318113
NA BCE33L2424 MutT/Nudix family proteinchromosome CDS2562973 447 + 0.313199
NA BCE33L1916 ATP-dependent RNA helicase (D-E-A-D box family)chromosome CDS2028514 1170 + 0.374359
NA BCE33L2646 MutT/Nudix family proteinchromosome CDS2758109 495 - 0.343434
NA BCE33L4086 transposase, C-terminal regionchromosome CDS4193899 399 - 0.353383
NA BCE33L2779 possible 7,8-dihydro-8-oxoguanine-triphosphatasechromosome CDS2896877 468 + 0.350427
NA BCE33L0333 conserved hypothetical proteinchromosome CDS387672 1110 + 0.369369
NA BCE33L2470 conserved hypothetical protein; possible chromosome replication initiation proteinchromosome CDS2605945 1026 - 0.294347
NA BCE33L2981 conserved hypothetical proteinchromosome CDS3112169 741 - 0.350877
NA BCE33L5022 hypothetical proteinchromosome CDS5121577 516 - 0.337209
NA BCE33L4130 conserved hypothetical protein; possible Holliday junction resolvasechromosome CDS4235354 414 - 0.408213
NA BCE33L0472 transposase, IS605 familychromosome CDS554148 1131 + 0.351901
NA BCE33L1809 MutT/Nudix family proteinchromosome CDS1936433 462 + 0.378788
NA BCE33L2988 conserved hypothetical proteinchromosome CDS3119090 708 + 0.379943
NA BCE33L3982 possible helicase, SNF2 familychromosome CDS4094983 1683 + 0.352347
NA BCE33L2388 conserved hypothetical proteinchromosome CDS2525382 882 - 0.326531
NA BCE33L0839 phage replication proteinchromosome CDS965860 861 + 0.464576
NA BCE33L4070 possible DNA polymerase III, delta subunitchromosome CDS4179097 1011 - 0.355094
NA BCE33L3509 conserved hypothetical proteinchromosome CDS3634083 435 - 0.31954
NA BCE33L3045 phosphohydrolase, MutT/Nudix familychromosome CDS3174549 462 + 0.37013
NA BCE33L4494 site-specific recombinase, phage integrase familychromosome CDS4591147 567 - 0.333333
NA BCE33L2431 MutT/Nudix family proteinchromosome CDS2568471 519 + 0.302505
NA BCE33L0970 hypothetical proteinchromosome CDS1076452 297 + 0.306397
NA BCE33L0828 conserved hypothetical protein; possible ATPasechromosome CDS955163 2016 - 0.309028
NA BCE33L0241 conserved hypothetical protein, homology to pX01-98chromosome CDS263951 1047 + 0.353391
NA BCE33L1461 5'-3' exonucleasechromosome CDS1546555 867 + 0.365629
NA BCE33L3285 conserved hypothetical proteinchromosome CDS3413321 3363 - 0.363961
NA BCE33L4380 MutT/Nudix family proteinchromosome CDS4488681 435 + 0.333333
NA BCE33L2400 resolvasechromosome CDS2538708 312 + 0.339744
NA BCE33L4087 transposase fragmentchromosome CDS4194322 471 - 0.37155
NA BCE33L3781 MutT/Nudix family proteinchromosome CDS3919090 486 - 0.37037
NA BCE33L1494 hypothetical proteinchromosome CDS1586166 621 + 0.288245
NA BCE33L4088 transposase, N-terminal regionchromosome CDS4194680 252 - 0.373016
NA BCE33L2410 MutT/Nudix family proteinchromosome CDS2549216 477 + 0.337526
NA BCE33L3454 group-specific proteinchromosome CDS3582078 348 - 0.318966
NA BCE33L2792 conserved hypothetical proteinchromosome CDS2907105 798 - 0.370927
NA BCE33L2275 hypothetical proteinchromosome CDS2414656 195 + 0.34359
NA BCE33L3396 site-specific recombinasechromosome CDS3530914 657 - 0.351598
NA BCE33L2086 serine/threonine protein kinasechromosome CDS2207032 822 + 0.306569
NA BCE33L3247 exonuclease family proteinchromosome CDS3370320 846 - 0.352246
NA BCE33L3909 MutT/Nudix family proteinchromosome CDS4030712 465 - 0.36129
NA BCE33L1788 group-specific proteinchromosome CDS1914542 1248 + 0.33734
NA BCE33L5047 UV-endonucleasechromosome CDS5147322 978 + 0.339468
NA BCE33L2490 MutT/Nudix family proteinchromosome CDS2623880 438 - 0.369863
NA BCE33L2765 MutT/Nudix family proteinchromosome CDS2885633 474 - 0.352321
NA BCE33L4541 pyrophosphohydrolase, MutT/Nudix familychromosome CDS4634084 480 - 0.375
NA BCE33L2092 group-specific proteinchromosome CDS2211631 609 - 0.302135
NA BCE33L1514 group-specific proteinchromosome CDS1603123 453 + 0.269316
NA BCE33L2669 group-specific proteinchromosome CDS2779380 849 - 0.286219
NA BCE33L4745 conserved hypothetical proteinchromosome CDS4838566 816 - 0.370098
NA BCE33L0832 possible ATPase involved in DNA repairchromosome CDS959077 1992 - 0.301707
NA BCE33L1876 MutT/Nudix family proteinchromosome CDS1997434 447 + 0.355705
NA BCE33L1441 methyltransferasechromosome CDS1524538 1140 + 0.388597
NA BCE33L3754 conserved hypothetical proteinchromosome CDS3889626 663 - 0.273002
NA BCE33L2315 conserved hypothetical proteinchromosome CDS2449200 531 + 0.269303
NA BCE33L1342 site-specific recombinase, phage integrase familychromosome CDS1434701 540 - 0.318519
NA BCE33L3468 possible phage integrase family proteinchromosome CDS3592830 966 + 0.334369
NA BCE33L0666 group-specific proteinchromosome CDS770256 639 - 0.328638
NA BCE33L2467 conserved hypothetical proteinchromosome CDS2603102 480 - 0.335417
NA BCE33L2042 MutT/Nudix family proteinchromosome CDS2162149 450 - 0.353333
NA BCE33L4921 possible transposasechromosome CDS5013306 501 + 0.343313
NA BCE33L4715 DNA primase, Toprim domainchromosome CDS4809786 345 - 0.362319
NA BCE33L1781 MutT/Nudix family proteinchromosome CDS1904797 609 - 0.315271
NA BCE33L1618 helicase, SWF/SNF familychromosome CDS1700866 3195 + 0.363693
NA BCE33L1265 group-specific proteinchromosome CDS1360043 774 + 0.344961
NA BCE33L0720 probable transposase, IS605 familychromosome CDS821417 1476 + 0.327236
NA BCE33L2224 group-specific proteinchromosome CDS2351978 261 + 0.356322
NA BCE33L3689 possible methyltransferasechromosome CDS3830837 567 - 0.354497
NA BCE33L3449 possible ATPase, AAA-superfamilychromosome CDS3578865 831 - 0.358604
NA BCE33L2511 MutT/Nudix family proteinchromosome CDS2640792 441 - 0.319728
NA BCE33L2500 group-specific proteinchromosome CDS2631250 657 - 0.312024
NA BCE33L1472 possible ribonuclease Hchromosome CDS1567970 660 + 0.343939
NA BCE33L4142 ATPase, AAA familychromosome CDS4247801 1287 + 0.391608
NA BCE33L1994 resolvasechromosome CDS2117396 786 + 0.37659
NA BCE33L1345 transposase, IS605 familychromosome CDS1438363 1368 + 0.372807
NA BCE33L0801 methyltransferasechromosome CDS919280 954 + 0.40566
NA BCE33L4228 site-specific recombinase, resolvase family (DNA invertase-like protein)chromosome CDS4338165 564 + 0.416667
NA BCE33L0202 TatD-related deoxyribonucleasechromosome CDS212725 783 + 0.337165
NA BCE33L3133 conserved hypothetical proteinchromosome CDS3262977 681 - 0.287812
NA BCE33L2799 MutT/Nudix family proteinchromosome CDS2914988 525 - 0.325714
NA BCE33L2364 phage terminase, small subunitchromosome CDS2497020 390 + 0.366667
NA BCE33L0776 collagen-binding surface proteinchromosome CDS882685 2742 + 0.394602
NA BCE33L0174 group-specific proteinchromosome CDS184510 504 + 0.339286
NA BCE33L3252 MutT/Nudix family proteinchromosome CDS3373984 390 - 0.389744
NA BCE33L0222 UV-endonuclease UvdE familychromosome CDS239730 963 + 0.353063
NA BCE33L4970 hypothetical and glycosyltransferase fusion proteinchromosome CDS5066688 3531 - 0.317474
NA BCE33L4940 conserved hypothetical proteinchromosome CDS5035357 1620 + 0.38642
NA BCE33L1987 conserved hypothetical protein; TPR-repeat domainschromosome CDS2108125 2676 + 0.34417
NA BCE33L0918 DNA repair exonucleasechromosome CDS1029562 1299 + 0.405697
NA BCE33L1984 group-specific proteinchromosome CDS2103240 363 + 0.316804
NA BCE33L2264 transposasechromosome CDS2395816 1122 + 0.368984
NA BCE33L3461 phage integrasechromosome CDS3585029 1146 + 0.319372
NA BCE33L4941 SNF2 family helicasechromosome CDS5036960 2757 + 0.396808
NA BCE33L2660 conserved hypothetical proteinchromosome CDS2767740 684 - 0.331871
NA BCE33L2461 transposase Achromosome CDS2593351 1431 - 0.363382
NA BCE33L1627 MutT/Nudix family proteinchromosome CDS1712583 486 - 0.366255
NA BCE33L4645 conserved hypothetical proteinchromosome CDS4743074 714 + 0.366947
addA BCE33L1039 ATP-dependent nuclease, subunit Achromosome CDS1147549 3726 + 0.398551
addB BCE33L1038 ATP-dependent nuclease, subunit Bchromosome CDS1144037 3516 + 0.395336
alkA BCE33L0399 DNA-3-methyladenine glycosylase II (3-methyladenine-DNA glycosidase)chromosome CDS463728 864 + 0.355324
alkA BCE33L0774 DNA-3-methyladenine glycosylase IIchromosome CDS880675 618 - 0.414239
alkA BCE33L3499 DNA-3-methyladenine glycosidasechromosome CDS3623464 912 + 0.338816
comEA BCE33L4074 comE operon protein 1chromosome CDS4183574 600 - 0.378333
comFA BCE33L4887 comF operon protein 1chromosome CDS4974141 1356 - 0.40118
deaD BCE33L2223 ATP-dependent RNA helicasechromosome CDS2350444 1353 + 0.375462
deaD BCE33L5149 ATP-dependent RNA helicasechromosome CDS5263559 1446 - 0.351314
deaD BCE33L0221 DEAD/DEAH box helicasechromosome CDS238047 1587 + 0.42155
deaD BCE33L4035 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS4144314 1311 - 0.371472
dinG BCE33L1443 ATP-dependent helicase, DinG familychromosome CDS1526059 1938 + 0.368937
dinG BCE33L1425 ATP-dependent DNA helicasechromosome CDS1508920 2805 + 0.35615
dinP BCE33L3897 possible DNA-damage-inducible protein P, DNA polymerase IVchromosome CDS4021468 1248 - 0.371795
dnaA BCE33L0001 chromosomal replication initiator proteinchromosome CDS408 1341 + 0.353468
dnaB BCE33L0840 replicative DNA helicasechromosome CDS966708 1296 + 0.43287
dnaB BCE33L4321 DNA replication proteinchromosome CDS4434166 1407 - 0.386638
dnaC BCE33L5165 replicative DNA helicasechromosome CDS5282312 1362 - 0.41116
dnaD BCE33L1428 DNA replication proteinchromosome CDS1513983 708 + 0.340395
dnaE BCE33L3316 DNA polymerase III, alpha subunitchromosome CDS3449059 948 - 0.330169
dnaE BCE33L4345 DNA polymerase III, alpha subunitchromosome CDS4461513 3327 - 0.370905
dnaG BCE33L4043 DNA primasechromosome CDS4151551 1797 - 0.370618
dnaI BCE33L4320 DNA replication primosomal proteinchromosome CDS4433194 939 - 0.368477
dnaN BCE33L0002 DNA polymerase III, beta subunitchromosome CDS1927 1140 + 0.328947
dnaN BCE33L2430 DNA polymerase III, beta subunitchromosome CDS2567318 1131 + 0.320955
dnaX BCE33L0019 DNA polymerase III, gamma and tau subunitschromosome CDS25517 1689 + 0.390764
exoA BCE33L3496 exodeoxyribonuclease IIIchromosome CDS3621447 759 - 0.333333
gerPC BCE33L1044 spore germination protein PCchromosome CDS1152472 615 - 0.338211
gyrA BCE33L0006 DNA topoisomerase II, ATP-hydrolyzing (DNA gyrase, subunit A)chromosome CDS6596 2472 + 0.372573
gyrB BCE33L0005 DNA topoisomerase II, ATP-hydrolyzing (DNA gyrase, subunit B)chromosome CDS4585 1923 + 0.372335
holB BCE33L0027 DNA polymerase III, delta prime subunitchromosome CDS36646 984 + 0.369919
hup BCE33L3486 DNA-binding protein HUchromosome CDS3611973 273 + 0.377289
hup BCE33L1392 DNA-binding protein HUchromosome CDS1482182 273 + 0.40293
hupA BCE33L2136 DNA-binding protein HUchromosome CDS2265011 273 - 0.373626
kapD BCE33L4642 sporulation inhibitorchromosome CDS4740192 624 - 0.373397
ligA BCE33L0279 DNA ligase(NAD+) (NAD-dependent DNA ligase)chromosome CDS327211 2010 + 0.381095
mfd BCE33L0048 transcription-repair coupling factorchromosome CDS54530 3531 + 0.358539
mutL BCE33L3527 DNA mismatch repair protein, MutL familychromosome CDS3655708 1944 - 0.388374
mutM BCE33L4327 formamidopyrimidine-DNA glycosylasechromosome CDS4439720 831 - 0.382671
mutS BCE33L3205 DNA mismatch repair proteinchromosome CDS3325882 1902 - 0.31756
mutS BCE33L3528 DNA mismatch repair protein, MutS familychromosome CDS3657660 2685 - 0.364991
mutSB BCE33L4296 DNA mismatch repair protein, MutS familychromosome CDS4406354 2361 - 0.392207
mutT BCE33L0450 MutT/NUDIX family proteinchromosome CDS522535 495 + 0.371717
mutT BCE33L4849 MutT/Nudix family proteinchromosome CDS4938225 459 - 0.3878
mutY BCE33L0430 A/G-specific adenine glycosylasechromosome CDS497186 1098 + 0.364299
nfo BCE33L4034 deoxyribonuclease IV, phage T4-induced (endonuclease IV)chromosome CDS4143187 897 - 0.370123
nheA BCE33L1698 enterotoxin; possible non-hemolytic enterotoxin lytic component L2chromosome CDS1796288 1161 + 0.310078
nth BCE33L1429 endonuclease IIIchromosome CDS1514706 648 + 0.367284
ntpA BCE33L2453 dATP pyrophosphohydrolasechromosome CDS2585805 438 - 0.340183
nudF BCE33L3851 ADP-ribose diphosphatasechromosome CDS3979620 540 - 0.362963
nudG BCE33L3377 phosphohydrolase, MutT/Nudix familychromosome CDS3512734 414 - 0.355072
ogt BCE33L3498 methylated-DNA--protein-cysteineS-methyltransferasechromosome CDS3622937 531 + 0.34275
ogt BCE33L1844 methylated-DNA--[protein]-cysteine S-methyltransferase (6-O-methylguanine-DNA methyltransferase)chromosome CDS1971073 453 + 0.375276
parC BCE33L3303 DNA topoisomerase IV, subunit Achromosome CDS3435499 2424 - 0.370875
parE BCE33L3304 topoisomerase IV, subunit Bchromosome CDS3437924 1965 - 0.388804
pcrA BCE33L0278 ATP-dependent DNA helicasechromosome CDS324940 2256 + 0.386082
pcrA BCE33L1120 ATP-dependent DNA helicasechromosome CDS1225665 2067 - 0.348331
pknB BCE33L2452 serine/threonine protein kinasechromosome CDS2584835 663 - 0.321267
polA BCE33L4328 DNA polymerase Ichromosome CDS4440563 2676 - 0.363229
polC BCE33L3577 DNA polymerase III, alpha subunitchromosome CDS3709943 4302 - 0.38145
priA BCE33L3627 primosomal protein N'chromosome CDS3764576 2406 - 0.372818
radC BCE33L4198 DNA repair proteinchromosome CDS4303904 678 - 0.393805
recA BCE33L3538 recA protein (recombinase A), C-terminal regionchromosome CDS3670820 426 - 0.389671
recA BCE33L3539 recA protein (recombinase A), N-terminal regionchromosome CDS3671552 627 - 0.409888
recD BCE33L4137 exodeoxyribonuclease V, alpha subunitchromosome CDS4241577 2337 - 0.379974
recF BCE33L0004 DNA replication and repair proteinchromosome CDS3419 1128 + 0.343085
recG BCE33L3614 ATP-dependent DNA helicasechromosome CDS3750199 2049 - 0.397755
recJ BCE33L4153 single-stranded-DNA-specific exonucleasechromosome CDS4259237 2340 - 0.383333
recN BCE33L3927 DNA repair proteinchromosome CDS4052354 1752 - 0.36016
recO BCE33L4046 recombination protein O (DNA repair protein O)chromosome CDS4155783 747 - 0.35743
recQ BCE33L2543 ATP-dependent DNA helicase Qchromosome CDS2666166 2118 - 0.359773
recQ BCE33L1366 ATP-dependent DNA helicase Qchromosome CDS1460248 1530 + 0.352941
recR BCE33L0021 recombination proteinchromosome CDS27572 597 + 0.396985
rnh BCE33L4300 ribonuclease HIIchromosome CDS4411443 936 + 0.399573
rnhA BCE33L1469 ribonuclease HIchromosome CDS1565820 387 - 0.361757
rnhB BCE33L3596 ribonuclease HII (RNase HII)chromosome CDS3734314 774 - 0.369509
rnmV BCE33L0036 ribonuclease M5chromosome CDS44734 558 + 0.379928
ruvA BCE33L4165 Holliday junction DNA helicase, subunit Achromosome CDS4272205 618 - 0.389968
ruvB BCE33L4164 Holliday junction DNA helicase, subunit Bchromosome CDS4271198 1011 - 0.412463
sbcC BCE33L2122 exonucleasechromosome CDS2242777 3090 + 0.353722
sbcD BCE33L2121 exonucleasechromosome CDS2241623 1158 + 0.358377
smf BCE33L3593 nucleotide-binding protein, Smf familychromosome CDS3731081 870 - 0.328736
splB BCE33L3959 spore photoproduct lyasechromosome CDS4077304 1026 - 0.382066
ssb BCE33L1967 single-stranded DNA-binding proteinchromosome CDS2079521 339 + 0.39528
ssb BCE33L5170 single-stranded DNA-binding proteinchromosome CDS5287491 519 - 0.429672
sspI BCE33L4306 small, acid-soluble spore protein Ichromosome CDS4419845 210 + 0.333333
tatD BCE33L0035 TatD related DNasechromosome CDS43753 768 + 0.373698
topA BCE33L3592 DNA topoisomerase Ichromosome CDS3728858 2079 - 0.392977
topB BCE33L0347 DNA topoisomerase (DNA topoisomerase I)chromosome CDS407914 2190 - 0.361187
topB BCE33L1725 DNA topoisomerase Ichromosome CDS1846343 2145 + 0.368765
tpn BCE33L1995 transposase, IS110 familychromosome CDS2118338 1014 + 0.346154
tpn BCE33L1996 transposase, N-terminal fragmentchromosome CDS2119368 198 + 0.328283
ung BCE33L5096 uracil-DNA glycosylasechromosome CDS5204207 678 - 0.356932
ung BCE33L1412 uracil-DNA glycosylase family protein; possible DNA polymerase, bacteriophage-typechromosome CDS1498326 642 + 0.359813
uvrA BCE33L4859 UvrABC system protein A (excinuclease ABC, subunit A)chromosome CDS4946753 2877 - 0.401112
uvrB BCE33L4860 UvrABC system protein B (excinuclease ABC, subunit B)chromosome CDS4949635 1977 - 0.398584
uvrC BCE33L0031 excinuclease ABC, C subunitchromosome CDS39675 291 + 0.340206
uvrC BCE33L2848 UvrC-like proteinchromosome CDS2965392 642 - 0.267913
uvrC BCE33L4267 excinuclease ABC, subunit Cchromosome CDS4376461 1785 - 0.359664
uvrC BCE33L2446 excinuclease ABC, C subunit, N-terminal regionchromosome CDS2580824 381 - 0.32021
xerD BCE33L4231 integrase/recombinasechromosome CDS4342341 969 - 0.377709
xerD BCE33L3590 site-specific integrase/recombinase XerD proteinchromosome CDS3726538 900 - 0.368889
xerD BCE33L3846 integrase/recombinase (tyrosine recombinase)chromosome CDS3976478 891 - 0.37037
xseA BCE33L3933 exodeoxyribonuclease VII, large subunitchromosome CDS4059100 1359 - 0.376012
xseB BCE33L3932 exodeoxyribonuclease VII, small subunitchromosome CDS4058880 231 - 0.376623
yhaZ BCE33L2796 conserved hypothetical proteinchromosome CDS2912040 771 + 0.329442
ywkC BCE33L2067 conserved hypothetical proteinchromosome CDS2189474 543 - 0.32965