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2024-05-18 13:33:50

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome 1

Number of genes found: 149

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Burkholderia pseudomallei K96243, K96243
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BPSL1157 putative phage integrasechromosome 1 CDS1336223 1242 - 0.609501
NA BPSL2187 putative ATP-dependent RNA helicasechromosome 1 CDS2624724 1551 + 0.724694
NA BPSL0563 hypothetical proteinchromosome 1 CDS616192 465 - 0.52043
NA BPSL0120 SMF family proteinchromosome 1 CDS135094 1191 - 0.745592
NA BPSL2279 putative single-stranded-DNA-specific exonucleasechromosome 1 CDS2745783 1695 + 0.717994
NA BPSL0157 phage-encoded modification methylasechromosome 1 CDS167900 759 + 0.662714
NA BPSL0946 conserved hypothetical proteinchromosome 1 CDS1105502 933 - 0.588424
NA BPSL0208 integrase/recombinasechromosome 1 CDS216660 933 - 0.693462
NA BPSL0694 hypothetical proteinchromosome 1 CDS791026 501 + 0.738523
NA BPSL1580 hypothetical proteinchromosome 1 CDS1836483 363 + 0.680441
NA BPSL0606 hypothetical proteinchromosome 1 CDS683388 651 - 0.677419
NA BPSL1089 conserved hypothetical proteinchromosome 1 CDS1260737 480 + 0.68125
NA BPSL2602 putative ATPase proteinchromosome 1 CDS3121078 1368 - 0.689327
NA BPSL2692 conserved hypothetical proteinchromosome 1 CDS3219231 441 - 0.664399
NA BPSL1022 hypothetical proteinchromosome 1 CDS1191502 765 - 0.730719
NA BPSL0949 hypothetical proteinchromosome 1 CDS1109892 381 - 0.595801
NA BPSL0042 type III restriction-modification system methylasechromosome 1 CDS42169 2013 + 0.684054
NA BPSL0169 phage terminase, endonuclease subunitchromosome 1 CDS172955 690 - 0.714493
NA BPSL2324 putative ATP-dependent helicasechromosome 1 CDS2806338 3894 - 0.707242
NA BPSL1702 putative invertasechromosome 1 CDS1978747 594 - 0.555556
NA BPSL1226 conserved hypothetical proteinchromosome 1 CDS1412014 591 + 0.63621
NA BPSL3257 putative plasmid recombinasechromosome 1 CDS3873083 1002 + 0.577844
NA BPSL1486 hypothetical proteinchromosome 1 CDS1724107 696 - 0.715517
NA BPSL1979 putative helicasechromosome 1 CDS2357081 2364 - 0.690355
NA BPSL3274 conserved hypothetical proteinchromosome 1 CDS3890197 435 - 0.744828
NA BPSL1910 putative transposasechromosome 1 CDS2274974 1464 + 0.642076
NA BPSL0471 conserved hypothetical proteinchromosome 1 CDS508420 1476 + 0.765583
NA BPSL1437 putative DNA polymerasechromosome 1 CDS1673453 1035 + 0.735266
NA BPSL0559 hypothetical proteinchromosome 1 CDS613364 558 + 0.586021
NA BPSL1530 putative ATP-dependent DNA helicase-related proteinchromosome 1 CDS1771348 2061 + 0.697234
NA BPSL0090 putative transposase proteinchromosome 1 CDS102609 831 - 0.616125
NA BPSL1439 putative deoxyribonucleasechromosome 1 CDS1675112 810 + 0.67284
NA BPSL2306 putative DNA polymerase IVchromosome 1 CDS2780897 1221 - 0.706798
NA BPSL0966 putative DNA polymerase III chi subunitchromosome 1 CDS1124687 417 + 0.688249
NA BPSL2486 conserved hypothetical proteinchromosome 1 CDS2999302 684 - 0.694444
NA BPSL3160 conserved hypothetical proteinchromosome 1 CDS3764662 714 - 0.680672
NA BPSL2296 putative transposasechromosome 1 CDS2762495 1464 - 0.638661
NA BPSL2420 putative excinuclease ABC subunit Cchromosome 1 CDS2924091 2238 - 0.697945
NA BPSL2888 putative hydrolasechromosome 1 CDS3456416 510 + 0.713726
NA BPSL1282 putative exodeoxyribonuclease V gamma chainchromosome 1 CDS1487013 3345 + 0.741106
NA BPSL0879 putative exodeoxyribonuclease VII large subunitchromosome 1 CDS1018910 1383 + 0.740419
NA BPSL0515 conserved hypothetical proteinchromosome 1 CDS569732 627 + 0.728868
NA BPSL3001 putative transposasechromosome 1 CDS3577395 1464 - 0.641393
NA BPSL0214 hypothetical proteinchromosome 1 CDS223564 255 + 0.631373
NA BPSL0347 putative insertion element proteinchromosome 1 CDS370573 510 - 0.676471
NA BPSL0772 phage integrase family proteinchromosome 1 CDS896537 1887 - 0.645999
NA BPSL0943 putative insertion element proteinchromosome 1 CDS1099585 828 - 0.611111
NA BPSL2999 putative (di)nucleoside polyphosphate hydrolasechromosome 1 CDS3575884 651 + 0.639017
NA BPSL2013 NUDIX family hydrolasechromosome 1 CDS2402897 474 - 0.725738
NA BPSL0472 putative DNA polymerase III alpha subunitchromosome 1 CDS509901 3219 + 0.701771
NA BPSL2508 putative exported proteinchromosome 1 CDS3022411 318 - 0.716981
NA BPSL0950 insertion element hypothetical proteinchromosome 1 CDS1110368 264 + 0.568182
NA BPSL0101 putative DNA-3-methyladenine glycosylase IIchromosome 1 CDS111591 942 + 0.749469
NA BPSL0091 putative transposase proteinchromosome 1 CDS103466 264 - 0.568182
NA BPSL0577 phage integrase family proteinchromosome 1 CDS637433 1179 - 0.544529
NA BPSL1675 putative transposasechromosome 1 CDS1954466 480 - 0.629167
NA BPSL0583 hypothetical proteinchromosome 1 CDS646155 1335 - 0.502622
NA BPSL0571 putative membrane proteinchromosome 1 CDS626686 1863 + 0.580784
NA BPSL1704 transposasechromosome 1 CDS1980105 366 - 0.584699
NA BPSL1657 insertion element hypothetical proteinchromosome 1 CDS1919543 834 - 0.617506
NA BPSL1905 putative transposasechromosome 1 CDS2267004 411 - 0.686131
NA BPSL2315 endonuclease/exonuclease/phosphatase family proteinchromosome 1 CDS2795573 777 + 0.658945
NA BPSL2936 putative DNA polymerase IIIchromosome 1 CDS3506570 1089 - 0.730946
NA BPSL2275 putative TatD related DNasechromosome 1 CDS2741335 789 - 0.70469
NA BPSL3344 putative bacteriophage integrasechromosome 1 CDS3966797 855 - 0.553216
NA BPSL2556 possible DNA polymerase/helicasechromosome 1 CDS3084928 1146 - 0.704188
NA BPSL3116 putative transposasechromosome 1 CDS3720594 264 + 0.564394
NA BPSL3013 putative NUDIX hydrolasechromosome 1 CDS3590308 450 - 0.684444
NA BPSL1506 conserved hypothetical proteinchromosome 1 CDS1744286 777 + 0.647362
NA BPSL3117 insertion element hypothetical proteinchromosome 1 CDS3720854 861 + 0.616725
NA BPSL1284 putative exodeoxyribonuclease V alpha chainchromosome 1 CDS1494163 2697 + 0.755284
NA BPSL0582 hypothetical proteinchromosome 1 CDS644090 2073 - 0.492523
NA BPSL1696 putative recombinasechromosome 1 CDS1975293 645 + 0.536434
NA BPSL0765 putative helicase family proteinchromosome 1 CDS886079 3561 + 0.587756
NA BPSL0557A putative phage proteinchromosome 1 CDS612642 207 - 0.642512
NA BPSL2183 putative phage-related DNA polymerasechromosome 1 CDS2621248 855 - 0.716959
NA BPSL0146 putative phage-encoded membrane proteinchromosome 1 CDS156936 2967 - 0.6606
NA BPSL1251 putative transposasechromosome 1 CDS1444338 465 + 0.713978
NA BPSL1283 putative exodeoxyribonuclease V beta chainchromosome 1 CDS1490354 3813 + 0.729609
NA BPSL0862 putative methylated-DNA--protein-cysteine methyltransferasechromosome 1 CDS1002367 525 + 0.668571
NA BPSL2881 putative membrane proteinchromosome 1 CDS3446148 2118 + 0.70255
NA BPSL0118 putative DNA topoisomerase IIIchromosome 1 CDS131843 2610 - 0.648276
NA BPSL2242 HhH-GPD superfamily base excision DNA repair proteinchromosome 1 CDS2704572 939 - 0.692226
NA BPSL2882 putative RNA-methylase proteinchromosome 1 CDS3448434 1293 + 0.716164
NA BPSL2495 conserved hypothetical proteinchromosome 1 CDS3007371 1158 - 0.686529
NA BPSL0776 putative recombinase Achromosome 1 CDS903338 1071 + 0.640523
NA BPSL2349 putative DNA photolyasechromosome 1 CDS2840120 1461 - 0.743326
NA BPSL0744 putative phage-related integrasechromosome 1 CDS857474 1359 - 0.62546
NA BPSL0587 phage integrase family proteinchromosome 1 CDS651797 627 - 0.598086
NA BPSL0944 putative phage integrase/recombinase proteinchromosome 1 CDS1100898 1224 + 0.589052
NA BPSL2834 putative RecN DNA repair proteinchromosome 1 CDS3387395 1650 + 0.715758
NA BPSL0191 endonuclease/exonuclease/phosphatase family proteinchromosome 1 CDS197596 771 + 0.625162
NA BPSL2586 putative phage integrasechromosome 1 CDS3105703 1269 - 0.650906
NA BPSL0073 DNA gyrase subunit Bchromosome 1 CDS81428 2469 - 0.642365
NA BPSL0100 O6-methylguanine-DNA methyltransferasechromosome 1 CDS110500 1095 + 0.700457
NA BPSL1924 hypothetical proteinchromosome 1 CDS2295449 399 + 0.686717
NA BPSL1658 insertion element hypothetical proteinchromosome 1 CDS1920400 264 - 0.568182
NA BPSL0917 putative DNA repair proteinchromosome 1 CDS1069929 711 - 0.739803
NA BPSL2819 conserved hypothetical proteinchromosome 1 CDS3371297 726 + 0.706612
NA BPSL0542 NUDIX domain family proteinchromosome 1 CDS593804 858 + 0.714452
NA BPSL2477 putative transposasechromosome 1 CDS2990180 1464 + 0.64071
NA BPSL0645 putative dATP pyrophosphohydrolasechromosome 1 CDS731470 477 + 0.672956
NA BPSL0763 putative helicase SNF2 family proteinchromosome 1 CDS878619 3183 + 0.572416
NA BPSL1670 putative transposasechromosome 1 CDS1949196 696 - 0.675287
NA BPSL1459 putative primosomal replication proteinchromosome 1 CDS1695154 300 + 0.64
dnaA BPSL0075 chromosomal replication initiator protein DnaAchromosome 1 CDS85351 1602 - 0.656679
dnaB BPSL1462 replicative DNA helicasechromosome 1 CDS1696355 1383 + 0.655098
dnaE BPSL1117 putative DNA polymerase III alpha subunitchromosome 1 CDS1295759 3525 + 0.669787
dnaN BPSL0074 DNA polymerase III, beta chainchromosome 1 CDS84085 1104 - 0.63587
dnaQ BPSL1341 DNA polymerase III, epsilon chainchromosome 1 CDS1566419 723 - 0.66805
dnaX BPSL1498 DNA polymerase III subunit gammachromosome 1 CDS1735645 2478 + 0.729621
fis BPSL2895 DNA-binding proteinchromosome 1 CDS3465185 234 + 0.594017
gyrA BPSL2521 DNA Gyrase, subunit Achromosome 1 CDS3036533 2601 - 0.652057
hupA BPSL0004 DNA-binding protein HU-alphachromosome 1 CDS5488 279 + 0.620072
ihfA BPSL1939 integration host factor alpha-subunitchromosome 1 CDS2309224 348 - 0.663793
ihfB BPSL2514 integration host factor beta-subunitchromosome 1 CDS3028067 324 - 0.623457
int BPSL0129 prophage integrasechromosome 1 CDS145390 1131 - 0.624226
intA BPSL0081 putative phage integrasechromosome 1 CDS92536 1230 + 0.598374
ligA BPSL2164 DNA ligasechromosome 1 CDS2596711 2076 - 0.684971
mfd BPSL2100 transcription-repair coupling factorchromosome 1 CDS2519326 3570 + 0.691877
mutL BPSL2814 putative DNA mismatch repair proteinchromosome 1 CDS3364898 2055 + 0.722141
mutM BPSL0526 putative formamidopyrimidine-DNA glycosylasechromosome 1 CDS578702 831 + 0.706378
mutS BPSL2252 DNA mismatch repair proteinchromosome 1 CDS2715154 2673 + 0.687617
mutY BPSL0527 putative A/G-specific adenine glycosylasechromosome 1 CDS579537 1107 + 0.729901
nth BPSL1103 endonuclease IIIchromosome 1 CDS1273889 645 - 0.654264
parC BPSL1070 topoisomerase IV subunit Achromosome 1 CDS1237506 2319 + 0.689521
parE BPSL1069 topoisomerase IV subunit Bchromosome 1 CDS1235465 1983 + 0.66818
priA BPSL3390 primosomal protein N'chromosome 1 CDS4026183 2268 - 0.723104
recG BPSL2867 putative ATP-dependent DNA helicasechromosome 1 CDS3429175 2247 - 0.732532
recO BPSL2427 DNA repair protein RecOchromosome 1 CDS2932549 828 - 0.69686
recQ BPSL3219 ATP-dependent DNA helicase RecQchromosome 1 CDS3814140 1935 - 0.676486
recR BPSL1500 recombination proteinchromosome 1 CDS1738571 609 + 0.689655
rep BPSL3355 ATP-dependent DNA helicase Repchromosome 1 CDS3977437 2088 - 0.652778
rhlE1 BPSL0695 putative ATP-dependent RNA helicase 1chromosome 1 CDS791664 1458 - 0.69273
rhlE2 BPSL1114 putative ATP-dependent RNA helicase 2chromosome 1 CDS1291364 1449 + 0.689441
rnhA BPSL1342 ribonuclease HIchromosome 1 CDS1567199 447 - 0.666667
rnhB BPSL2145 ribonuclease HIIchromosome 1 CDS2575277 645 - 0.693023
ruvA BPSL2898 holliday junction DNA helicasechromosome 1 CDS3468011 582 + 0.668385
ruvB BPSL2899 holliday junction DNA helicasechromosome 1 CDS3468774 1071 + 0.690943
ruvC BPSL2897 crossover junction endodeoxyribonucleasechromosome 1 CDS3467395 543 + 0.707182
ssb BPSL0547 single-strand binding proteinchromosome 1 CDS601561 555 + 0.704504
tag BPSL3317 DNA-3-methyladenine glycosylase Ichromosome 1 CDS3935910 609 + 0.655172
tnpA BPSL2817 transposasechromosome 1 CDS3368578 1221 - 0.62326
tnpA BPSL1932 transposasechromosome 1 CDS2299152 1221 + 0.62326
tnpA BPSL1028 transposasechromosome 1 CDS1197036 1221 - 0.62326
tnpA BPSL2488 transposasechromosome 1 CDS3001719 1221 - 0.62326
ung BPSL3055 uracil-DNA glycosylasechromosome 1 CDS3644787 738 + 0.696477
uvrA BPSL0545 excinuclease ABC subunit Achromosome 1 CDS597179 2868 - 0.662483
xerD BPSL0863 putative integrase/recombinasechromosome 1 CDS1002891 1002 + 0.692615