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2024-05-18 08:40:20

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome

Number of genes found: 61

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Tropheryma whipplei TW08/27, TW08/27
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA TW130 putative helicase regulatorchromosome CDS134760 2073 + 0.485769
NA TW704 putative exodeoxyribonucleasechromosome CDS798257 846 + 0.478723
NA TW314 putative DNA processing proteinchromosome CDS347316 1146 + 0.482548
NA TW312 conserved hypothetical proteinchromosome CDS345350 363 + 0.415978
NA TW165 putative serine/threonine protein kinasechromosome CDS203335 1197 + 0.444444
NA TW300 putative DNA-binding/repair enzymechromosome CDS337674 555 - 0.418018
NA TW394 conserved hypothetical proteinchromosome CDS430659 438 + 0.479452
NA TW109 putative NUDIX hydrolasechromosome CDS110016 609 - 0.489327
NA TW446 putative TatD-family DNasechromosome CDS486396 867 + 0.4406
NA TW783 putative DNA methylasechromosome CDS887009 882 + 0.459184
NA TW245 putative ATP-dependent DNA helicasechromosome CDS272079 1758 + 0.466439
NA TW389 conserved hypothetical proteinchromosome CDS423503 930 + 0.476344
NA TW713 putative DNA polymerasechromosome CDS806432 1236 - 0.467638
NA TW656 conserved hypothetical proteinchromosome CDS749768 564 - 0.473404
NA TW381 putative secreted proteinchromosome CDS412536 1209 - 0.419355
NA TW243 putative ATP-dependent DNA helicase subunitchromosome CDS267878 2922 + 0.439425
NA TW242 putative ATP-dependent DNA helicase subunitchromosome CDS264900 2982 + 0.437626
NA TW410 conserved hypothetical proteinchromosome CDS447831 1875 + 0.421867
NA TW090 ATP-dependent DNA helicasechromosome CDS88815 2232 + 0.448029
NA TW108 putative DNA recombinasechromosome CDS107600 1050 - 0.479048
NA TW386 putative DNA uptake proteinchromosome CDS420613 582 + 0.408935
NA TW101 conserved hypothetical protein (putative ATP-binding)chromosome CDS100840 1572 - 0.454198
NA TW315 putative DNA recombinasechromosome CDS348498 921 + 0.470141
NA TW788 putative serine/threonine-protein kinasechromosome CDS892514 1758 + 0.506257
NA TW691 conserved large hypothetical proteinchromosome CDS780347 3519 - 0.460642
dnaA TW001 chromosomal replication initiator protein DnaAchromosome CDS1 1437 + 0.388309
dnaB TW752 replicative DNA helicasechromosome CDS849132 1326 + 0.46908
dnaE TW252 DNA polymerase III alpha subunitchromosome CDS279326 3495 + 0.447783
dnaG TW484 DNA primasechromosome CDS522062 1812 - 0.449227
dnaN TW002 DNA polymerase III, beta chainchromosome CDS1767 1134 + 0.377425
dnaX TW727 DNA polymerase III subunit gamma/tauchromosome CDS822194 1569 - 0.457616
gyrA1 TW273 DNA gyrase subunit Achromosome CDS307631 2466 - 0.437551
gyrA1 TW006 DNA gyrase subunit Achromosome CDS6438 2460 + 0.492683
gyrB1 TW005 DNA gyrase subunit Bchromosome CDS4485 1950 + 0.475897
gyrB2 TW268 DNA gyrase subunit Bchromosome CDS301377 1989 + 0.459025
hup TW128 DNA-binding protein HU-alphachromosome CDS132298 282 + 0.521277
ligA TW354 DNA ligasechromosome CDS386982 1887 + 0.439322
mfd TW589 transcription-repair coupling factorchromosome CDS662858 3747 - 0.430478
nei TW374 endonuclease VIIIchromosome CDS406503 885 + 0.489266
polA TW480 DNA polymerase Ichromosome CDS517394 1071 - 0.436041
recA TW628 recombinase Achromosome CDS715252 1314 - 0.488584
recF TW003 DNA replication and repair protein recFchromosome CDS2890 1092 + 0.389194
recG TW195 ATP-dependent DNA helicase RecGchromosome CDS232840 2022 + 0.472799
recN TW111 DNA repair protein RecNchromosome CDS115156 1638 - 0.450549
recO TW487 DNA repair protein RecOchromosome CDS526096 744 - 0.46371
recR TW726 recombination protein RecRchromosome CDS821589 597 - 0.479062
rnhA TW531 ribonuclease HIchromosome CDS569929 486 + 0.475309
ruvA TW502 holliday junction DNA helicase RuvAchromosome CDS541501 525 - 0.468571
ruvB TW501 holliday junction DNA helicase RuvBchromosome CDS540495 996 - 0.482932
ruvC TW503 crossover junction endodeoxyribonuclease RuvCchromosome CDS542124 552 - 0.467391
ssb1 TW116 single-strand binding proteinchromosome CDS125457 561 - 0.513369
ssb2 TW367 single-strand DNA binding proteinchromosome CDS399273 447 + 0.47651
topA TW715 DNA topoisomerase Ichromosome CDS808491 2526 - 0.488124
ung TW179 uracil DNA glycosylasechromosome CDS221086 693 + 0.506494
uvrA TW476 excinuclease ABC subunit Achromosome CDS510167 2847 - 0.425711
uvrB TW477 excinuclease ABC subunit Bchromosome CDS513025 2034 - 0.417896
uvrC TW475 excinuclease ABC subunit Cchromosome CDS508335 1824 - 0.421601
xseA TW665 exodeoxyribonuclease VII large subunitchromosome CDS756796 1215 + 0.446091
xseB TW666 probable exodeoxyribonuclease VII small subunitchromosome CDS758059 366 + 0.467213
xthA1 TW756 exodeoxyribonuclease IIIchromosome CDS853087 810 + 0.471605
xthA1 TW323 exodeoxyribonuclease IIIchromosome CDS355281 840 + 0.496429