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2024-05-14 10:10:19

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome

Number of genes found: 219

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Geobacillus kaustophilus HTA426, HTA426
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
GK0019 GK0019 DNA repair and genetic recombination proteinchromosome CDS29351 597 + 0.536013
GK0025 GK0025 DNA-directed DNA polymerase III delta' subunitchromosome CDS38997 987 + 0.535968
GK0032 GK0032 deoxyribonucleasechromosome CDS45742 771 + 0.501945
GK0034 GK0034 hypothetical conserved proteinchromosome CDS48191 549 + 0.588342
GK0048 GK0048 transcription-repair coupling factorchromosome CDS58574 3534 + 0.516695
GK0059 GK0059 serine/threonine protein kinasechromosome CDS72183 975 + 0.569231
GK0145 GK0145 transposasechromosome CDS150099 1659 - 0.543098
GK0158 GK0158 transposase of IS1604-like elementchromosome CDS170646 1050 - 0.488571
GK0159 GK0159 transposasechromosome CDS171770 864 - 0.440972
GK0160 GK0160 transposasechromosome CDS172630 327 - 0.455657
GK0161 GK0161 hypothetical proteinchromosome CDS173028 309 - 0.514563
GK0165 GK0165 hypothetical proteinchromosome CDS177247 540 - 0.481481
GK0167 GK0167 transposase of IS653-like elementchromosome CDS178398 573 + 0.527051
GK0169 GK0169 transposase of IS5377-like elementchromosome CDS179979 1134 + 0.514991
GK0175 GK0175 transposasechromosome CDS185011 1659 + 0.543701
GK0184 GK0184 deoxyribonucleasechromosome CDS192711 753 - 0.585657
GK0226 GK0226 ATP-dependent RNA helicasechromosome CDS238745 1404 + 0.546296
GK0275 GK0275 ATP-dependent DNA helicasechromosome CDS300373 2175 + 0.533793
GK0276 GK0276 DNA ligase (polydeoxyribonucleotide synthase[NAD+])chromosome CDS302568 2013 + 0.598112
GK0285 GK0285 transposase of IS652-like elementchromosome CDS313641 1080 + 0.478704
GK0293 GK0293 transposase of IS231E-like elementchromosome CDS319184 1362 - 0.461821
GK0295 GK0295 transposase of ISBst12-like elementchromosome CDS321329 1449 - 0.481021
GK0297 GK0297 transposasechromosome CDS323289 369 + 0.525745
GK0298 GK0298 hypothetical proteinchromosome CDS324051 228 + 0.508772
GK0302 GK0302 hypothetical conserved proteinchromosome CDS330184 1188 + 0.530303
GK0308 GK0308 transposasechromosome CDS337278 1191 - 0.448363
GK0319 GK0319 hypothetical conserved proteinchromosome CDS348882 4122 + 0.56526
GK0322 GK0322 hypothetical proteinchromosome CDS355570 225 - 0.52
GK0333 GK0333 hypothetical proteinchromosome CDS366969 357 + 0.588235
GK0335 GK0335 transposasechromosome CDS368629 1137 + 0.55321
GK0345 GK0345 transposase of IS654-like elementchromosome CDS379813 1170 - 0.455556
GK0349 GK0349 transposasechromosome CDS387370 1248 + 0.500801
GK0371 GK0371 transposasechromosome CDS414192 1119 + 0.433423
GK0390 GK0390 hypothetical conserved proteinchromosome CDS435262 1188 + 0.531145
GK0405 GK0405 transposasechromosome CDS451547 1056 + 0.516098
GK0428 GK0428 DNA-3-methyladenine glycosidase IIchromosome CDS470773 885 + 0.588701
GK0463 GK0463 adenine glycosylasechromosome CDS504639 1101 + 0.5604
GK0467 GK0467 hypothetical proteinchromosome CDS507248 210 + 0.595238
GK0488 GK0488 site-specific recombinasechromosome CDS535715 1545 - 0.51068
GK0509 GK0509 hypothetical proteinchromosome CDS545323 312 + 0.477564
GK0522 GK0522 site-specific recombinase (phage integrase family)chromosome CDS551101 543 + 0.484346
GK0576 GK0576 transposase of IS654-like elementchromosome CDS600788 582 + 0.415808
GK0579 GK0579 transposasechromosome CDS603157 1140 - 0.551754
GK0594 GK0594 single strand DNAspecific exonucleasechromosome CDS618168 1662 - 0.376053
GK0595 GK0595 cassette chromosome recombinase Bchromosome CDS620226 1455 - 0.393814
GK0599 GK0599 integrase (resolvase family)chromosome CDS622815 1512 + 0.363095
GK0600 GK0600 cassette chromosome recombinase Bchromosome CDS624313 1521 + 0.357659
GK0602 GK0602 hypothetical proteinchromosome CDS627217 966 + 0.298137
GK0681 GK0681 ATP-dependent deoxyribonuclease subunit Bchromosome CDS696991 3504 + 0.556792
GK0682 GK0682 ATP-dependent deoxyribonuclease subunit Achromosome CDS700495 3729 + 0.578976
GK0683 GK0683 DNA repair exonucleasechromosome CDS704244 1179 + 0.586938
GK0684 GK0684 DNA exonucleasechromosome CDS705419 3345 + 0.59133
GK0760 GK0760 hypothetical conserved proteinchromosome CDS784227 1047 - 0.430755
GK0778 GK0778 hypothetical conserved proteinchromosome CDS800349 1188 - 0.531987
GK0780 GK0780 transposase of IS1604-like elementchromosome CDS806172 1251 + 0.529976
GK0783 GK0783 hypothetical conserved proteinchromosome CDS810697 1506 + 0.525232
GK0784 GK0784 hypothetical conserved proteinchromosome CDS812199 753 + 0.52324
GK0786 GK0786 transposasechromosome CDS814903 1191 + 0.448363
GK0862 GK0862 hypothetical conserved proteinchromosome CDS880786 258 + 0.426357
GK0869 GK0869 hypothetical conserved proteinchromosome CDS886140 444 - 0.518018
GK0877 GK0877 transposase of IS654-like elementchromosome CDS892179 1170 - 0.45641
GK0878 GK0878 hypothetical proteinchromosome CDS893488 1080 - 0.321296
GK0880 GK0880 transposase of IS1604-like elementchromosome CDS896370 1251 + 0.53717
GK0884 GK0884 site-specific recombinase (resolvase family)chromosome CDS899954 1473 - 0.381534
GK0887 GK0887 hypothetical conserved proteinchromosome CDS908410 1659 - 0.546715
GK0945 GK0945 methylated-DNA-protein-cysteineS-methyltransferasechromosome CDS965416 495 + 0.589899
GK0993 GK0993 hypothetical conserved proteinchromosome CDS1015305 384 + 0.570312
GK1002 GK1002 transposasechromosome CDS1027256 1659 + 0.546715
GK1006 GK1006 transposase of IS5377-like elementchromosome CDS1032530 1134 - 0.514991
GK1012 GK1012 transposasechromosome CDS1037949 1659 - 0.544304
GK1017 GK1017 hypothetical conserved proteinchromosome CDS1044214 372 + 0.534946
GK1098 GK1098 hypothetical conserved proteinchromosome CDS1117919 597 + 0.59129
GK1186 GK1186 ATP-dependent DNA helicasechromosome CDS1205478 2049 + 0.576867
GK1205 GK1205 ribonuclease HIIchromosome CDS1223467 783 + 0.616858
GK1212 GK1212 integrase/recombinasechromosome CDS1231781 870 + 0.510345
GK1295 GK1295 hypothetical proteinchromosome CDS1312466 306 + 0.588235
GK1296 GK1296 group II intron reverse transcriptase/maturasechromosome CDS1313922 1482 + 0.387989
GK1330 GK1330 resolvasechromosome CDS1354535 654 + 0.591743
GK1351 GK1351 hypothetical conserved proteinchromosome CDS1372704 666 + 0.537538
GK1355 GK1355 recombinase of Bh.Int-like elementchromosome CDS1375247 1260 + 0.496825
GK1383 GK1383 hypothetical proteinchromosome CDS1410700 2424 + 0.427805
GK1385 GK1385 hypothetical proteinchromosome CDS1415631 1671 + 0.398564
GK1388 GK1388 hypothetical proteinchromosome CDS1418291 1659 + 0.546715
GK1416 GK1416 type III restriction-modification system, methyltransferasechromosome CDS1450524 1437 + 0.568546
GK1454 GK1454 hypothetical conserved proteinchromosome CDS1494569 729 + 0.565158
GK1455 GK1455 recombinase of Bh.Int-like elementchromosome CDS1496009 1098 + 0.498179
GK1543 GK1543 hypothetical conserved proteinchromosome CDS1581829 1143 + 0.588801
GK1544 GK1544 ATP-dependent helicasechromosome CDS1583094 1938 + 0.511868
GK1634 GK1634 hypothetical proteinchromosome CDS1665598 987 - 0.555218
GK1646 GK1646 transposasechromosome CDS1676570 1056 + 0.511364
GK1686 GK1686 serine/threonine protein kinasechromosome CDS1710683 720 - 0.556944
GK1688 GK1688 DNA topoisomerase IIIchromosome CDS1711828 2094 - 0.560172
GK1695 GK1695 transposasechromosome CDS1719504 1659 + 0.544304
GK1704 GK1704 hypothetical conserved proteinchromosome CDS1729553 1020 - 0.494118
GK1708 GK1708 transposasechromosome CDS1732760 1437 + 0.549756
GK1712 GK1712 transposase of IS5377-like elementchromosome CDS1738518 1092 - 0.521978
GK1721 GK1721 transposasechromosome CDS1748429 879 - 0.510808
GK1725 GK1725 hypothetical conserved proteinchromosome CDS1751297 1188 + 0.531145
GK1730 GK1730 integrase/recombinasechromosome CDS1756212 906 - 0.359823
GK1750 GK1750 DNA topoisomerase IV subunit Achromosome CDS1777714 2445 - 0.562781
GK1751 GK1751 DNA topoisomerase IV subunit Bchromosome CDS1780218 1938 - 0.539732
GK1782 GK1782 hypothetical conserved proteinchromosome CDS1812732 447 + 0.489933
GK1794 GK1794 hypothetical proteinchromosome CDS1820791 393 - 0.506361
GK1815 GK1815 DNA topoisomerasechromosome CDS1839482 2157 - 0.553083
GK1816 GK1816 transposasechromosome CDS1842253 1179 - 0.38592
GK1851 GK1851 hypothetical conserved proteinchromosome CDS1878266 927 - 0.539374
GK1869 GK1869 hypothetical conserved proteinchromosome CDS1896374 405 - 0.535802
GK1876 GK1876 transposasechromosome CDS1903563 1659 + 0.54792
GK1882 GK1882 transposasechromosome CDS1912241 1185 - 0.582278
GK1883 GK1883 transposasechromosome CDS1913641 333 + 0.45045
GK1884 GK1884 transposasechromosome CDS1913970 873 + 0.444444
GK1900 GK1900 transposasechromosome CDS1932550 1470 + 0.57551
GK1903 GK1903 transposasechromosome CDS1938876 1659 - 0.54792
GK1916 GK1916 transposase of IS1604-like elementchromosome CDS1956544 1251 + 0.529976
GK1944 GK1944 transposasechromosome CDS1984230 1458 + 0.513717
GK1987 GK1987 transposasechromosome CDS2031567 1056 + 0.500947
GK2002 GK2002 hypothetical conserved proteinchromosome CDS2047118 1314 + 0.48554
GK2012 GK2012 transposasechromosome CDS2056776 1356 + 0.563422
GK2025 GK2025 transposasechromosome CDS2071410 1221 + 0.562654
GK2085 GK2085 hypothetical conserved proteinchromosome CDS2125511 1188 + 0.530303
GK2101 GK2101 transposasechromosome CDS2142323 1113 - 0.544474
GK2104 GK2104 DNA/RNA helicasechromosome CDS2146214 2448 - 0.507353
GK2107 GK2107 hypothetical proteinchromosome CDS2149795 267 + 0.382022
GK2108 GK2108 transposasechromosome CDS2150290 1056 + 0.501894
GK2176 GK2176 ATP-dependent DNA helicasechromosome CDS2219353 2730 - 0.591209
GK2250 GK2250 transposasechromosome CDS2285898 1056 - 0.488636
GK2251 GK2251 transposasechromosome CDS2287087 270 - 0.411111
GK2252 GK2252 transposasechromosome CDS2287602 1191 - 0.448363
GK2267 GK2267 transposasechromosome CDS2301297 879 + 0.510808
GK2315 GK2315 integrase/recombinasechromosome CDS2345163 897 - 0.541806
GK2320 GK2320 ADP-ribose pyrophosphatasechromosome CDS2348994 564 - 0.547872
GK2338 GK2338 transposasechromosome CDS2363712 1248 + 0.358974
GK2359 GK2359 transposasechromosome CDS2385632 1248 + 0.358974
GK2389 GK2389 DNA repair protein (recombination protein N)chromosome CDS2420925 1722 - 0.544135
GK2394 GK2394 exodeoxyribonuclease VII small subunit (exonuclease VII small subunit)chromosome CDS2427168 213 - 0.492958
GK2395 GK2395 exodeoxyribonuclease VII large subunitchromosome CDS2427395 1347 - 0.573868
GK2426 GK2426 DNA/RNA helicase (SNF2 family)chromosome CDS2456564 1665 + 0.525526
GK2474 GK2474 endonuclease IVchromosome CDS2494881 900 - 0.536667
GK2475 GK2475 ATP-dependent RNA helicasechromosome CDS2495822 1311 - 0.53013
GK2486 GK2486 DNA repair protein (recombination protein O)chromosome CDS2507252 789 - 0.534854
GK2513 GK2513 hypothetical conserved proteinchromosome CDS2532557 1047 - 0.582617
GK2554 GK2554 hypothetical conserved proteinchromosome CDS2566375 417 - 0.573142
GK2561 GK2561 ATP-dependent exonuclease Vchromosome CDS2572144 2361 - 0.565015
GK2567 GK2567 hypothetical conserved proteinchromosome CDS2578278 1296 - 0.571759
GK2580 GK2580 single-strand DNA-specific exonucleasechromosome CDS2595350 2322 - 0.60379
GK2591 GK2591 holliday junction DNA helicasechromosome CDS2606821 1002 - 0.606786
GK2592 GK2592 holliday junction DNA helicasechromosome CDS2607848 585 - 0.596581
GK2618 GK2618 DNA repair proteinchromosome CDS2630824 681 - 0.534508
GK2663 GK2663 transposasechromosome CDS2684155 1449 - 0.481021
GK2675 GK2675 excinuclease ABC subunit Cchromosome CDS2695188 1773 - 0.525099
GK2693 GK2693 DNA mismatch repair proteinchromosome CDS2712503 2355 - 0.584289
GK2697 GK2697 ribonuclease HIII (RNase HIII)chromosome CDS2717612 936 + 0.580128
GK2728 GK2728 formamidopyrimidine-DNA glycosidasechromosome CDS2748396 825 - 0.592727
GK2744 GK2744 DNA-directed DNA polymerase III alpha subunitchromosome CDS2766627 3276 - 0.60348
GK2768 GK2768 hypothetical proteinchromosome CDS2792943 1149 - 0.54134
GK2786 GK2786 hypothetical conserved proteinchromosome CDS2812558 990 - 0.526263
GK2858 GK2858 hypothetical conserved proteinchromosome CDS2885869 468 - 0.581197
GK2880 GK2880 transposasechromosome CDS2906334 1119 - 0.439678
GK2902 GK2902 hypothetical proteinchromosome CDS2928050 513 + 0.489279
GK2904 GK2904 transposasechromosome CDS2929995 1137 - 0.55321
GK2907 GK2907 transposasechromosome CDS2934024 879 - 0.508532
GK2911 GK2911 transposase of IS1604-like elementchromosome CDS2936987 1164 - 0.527491
GK2912 GK2912 hypothetical conserved proteinchromosome CDS2938293 564 - 0.533688
GK2913 GK2913 integrase/recombinasechromosome CDS2939310 1014 - 0.371795
GK2918 GK2918 hypothetical conserved proteinchromosome CDS2952792 897 + 0.566332
GK2942 GK2942 hypothetical conserved proteinchromosome CDS2971646 1188 + 0.530303
GK2952 GK2952 hypothetical conserved proteinchromosome CDS2980706 504 - 0.547619
GK2989 GK2989 transposasechromosome CDS3012735 1662 - 0.547533
GK3002 GK3002 hypothetical conserved proteinchromosome CDS3026393 360 - 0.586111
GK3051 GK3051 hypothetical proteinchromosome CDS3070715 1068 - 0.319288
GK3067 GK3067 NTP pyrophosphohydrolases including oxidative damage repair enzymeschromosome CDS3087571 459 - 0.51634
GK3085 GK3085 excinuclease ABC subunit Achromosome CDS3103967 2868 - 0.588912
GK3086 GK3086 excinuclease ABC subunit Bchromosome CDS3106842 1977 - 0.570561
GK3111 GK3111 hypothetical proteinchromosome CDS3133965 387 - 0.571059
GK3119 GK3119 hypothetical proteinchromosome CDS3141775 528 + 0.524621
GK3167 GK3167 hypothetical proteinchromosome CDS3189913 738 - 0.490515
GK3191 GK3191 single-strand DNA-binding proteinchromosome CDS3225953 360 - 0.563889
GK3236 GK3236 transposasechromosome CDS3270832 1329 - 0.563582
GK3239 GK3239 transposasechromosome CDS3275419 1659 + 0.542495
GK3262 GK3262 DNA/RNA helicase (SNF2 family)chromosome CDS3303421 2760 + 0.576087
GK3268 GK3268 hypothetical proteinchromosome CDS3309442 1314 - 0.409437
GK3287 GK3287 hypothetical conserved proteinchromosome CDS3328422 477 - 0.431866
GK3301 GK3301 transposasechromosome CDS3343660 1137 - 0.55321
GK3302 GK3302 transposasechromosome CDS3345899 1659 + 0.543098
GK3303 GK3303 transposasechromosome CDS3347712 1620 + 0.55
GK3306 GK3306 transposase of IS642-like elementchromosome CDS3351276 435 + 0.510345
GK3307 GK3307 transposase of IS642-like elementchromosome CDS3351950 384 + 0.489583
GK3310 GK3310 transposasechromosome CDS3354622 879 - 0.510808
GK3312 GK3312 transposase of ISBst12-like elementchromosome CDS3357579 1446 + 0.475795
GK3421 GK3421 uracil-DNA glycosylasechromosome CDS3461092 690 - 0.550725
GK3439 GK3439 transposasechromosome CDS3480151 1281 - 0.576112
GK3440 GK3440 transposasechromosome CDS3481557 327 + 0.455657
GK3441 GK3441 transposasechromosome CDS3481880 873 + 0.444444
GK3442 GK3442 transposase (ISL3 family)chromosome CDS3482966 1080 - 0.476852
GK3476 GK3476 replicative DNA helicasechromosome CDS3522675 1365 - 0.536996
GK3481 GK3481 single-strand DNA-binding proteinchromosome CDS3527982 495 - 0.531313
comEA GK2517 late competence protein (DNA binding and uptake)chromosome CDS2536940 624 - 0.581731
comFA GK3147 late competence proteinchromosome CDS3167002 1392 - 0.604167
csgA GK2161 sporulation-specific SASP protein (sigma-G-dependent sporulation specific SASP protein)chromosome CDS2208154 255 + 0.482353
dnaA GK0001 chromosome replication initiator proteinchromosome CDS88 1353 + 0.481153
dnaB GK2722 chromosome replication initiation/membrane attachment proteinchromosome CDS2743386 1386 - 0.544733
dnaD GK2170 chromosome replication initiation proteinchromosome CDS2214869 702 - 0.542735
dnaG GK2483 DNA primasechromosome CDS2503403 1797 - 0.552588
dnaI GK2721 primosome component (helicase loader)chromosome CDS2742433 942 - 0.523355
dnaN GK0002 DNA-directed DNA polymerase III beta subunitchromosome CDS1613 1137 + 0.495163
dnaX GK0017 DNA-directed DNA polymerase III gamma and tau subunitschromosome CDS27312 1680 + 0.533333
gyrA GK0006 DNA gyrase subunit Achromosome CDS6418 2457 + 0.533578
gyrB GK0005 DNA gyrase subunit Bchromosome CDS4351 1917 + 0.526343
hbs GK2215 DNA-binding protein HU (DNA-binding protein II)chromosome CDS2255728 273 - 0.483516
mutL GK1307 DNA mismatch repair proteinchromosome CDS1329109 1893 + 0.574749
mutS GK1306 DNA mismatch repair proteinchromosome CDS1326404 2691 + 0.570792
nth GK2169 endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)chromosome CDS2214094 672 - 0.526786
polA GK2730 DNA-directed DNA polymerase Ichromosome CDS2749550 2637 - 0.533561
polC GK1258 DNA-directed DNA polymerase III alpha chainchromosome CDS1271567 4335 + 0.540484
priA GK1170 primosomal replication factor Y (primosomal protein N')chromosome CDS1189753 2406 + 0.586035
recF GK0004 DNA replication and repair proteinchromosome CDS3180 1119 + 0.478999
recQ GK2243 ATP-dependent DNA helicasechromosome CDS2278880 1524 - 0.604331
smf GK1210 DNA processing protein (Smf family)chromosome CDS1228617 882 + 0.580499
topA GK1211 DNA topoisomerase I (omega-protein) (relaxing enzyme) (untwisting enzyme)chromosome CDS1229577 2076 + 0.5342