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2024-05-19 00:51:33

Gene list

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COG category: Replication, recombination and repair
Genomic element: chromosome 1

Number of genes found: 89

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Thermus thermophilus HB8, HB8
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
TTHA0001 DNA polymerase III, beta subunitchromosome 1 CDS55 1128 + 0.714539
TTHA0063 primosomal protein Nchromosome 1 CDS59652 2112 - 0.731534
TTHA0074 DNA topoisomerase IAchromosome 1 CDS68753 2493 - 0.724027
TTHA0109 ATP-dependent RNA helicasechromosome 1 CDS108345 1554 - 0.723295
TTHA0112 endonuclease IIIchromosome 1 CDS112318 663 - 0.704374
TTHA0121 competence protein DprA (SMF protein (DNA processing chain A))chromosome 1 CDS121447 1005 + 0.729353
TTHA0135 MutT/nudix family proteinchromosome 1 CDS132909 465 + 0.703226
TTHA0180 DNA polymerase III alpha subunitchromosome 1 CDS171503 6204 - 0.682947
TTHA0198 ribonuclease HIIchromosome 1 CDS193335 612 - 0.712418
TTHA0234 transposasechromosome 1 CDS227477 1221 - 0.647011
TTHA0244 single-stranded DNA binding proteinchromosome 1 CDS235462 792 - 0.69697
TTHA0264 RecF proteinchromosome 1 CDS251698 1032 + 0.748062
TTHA0265 conserved hypothetical proteinchromosome 1 CDS252687 786 + 0.75827
TTHA0291 Holliday junction DNA helicase RuvAchromosome 1 CDS283854 576 + 0.708333
TTHA0329 DNA-3-methyladenine glycosidasechromosome 1 CDS315725 558 + 0.725806
TTHA0372 conserved hypothetical proteinchromosome 1 CDS354878 339 + 0.669617
TTHA0406 RuvB, Holliday junciton DNA helicasechromosome 1 CDS385614 975 - 0.700513
TTHA0409 putative modification methylasechromosome 1 CDS388370 894 + 0.659955
TTHA0528 ADP-ribose pyrophosphatasechromosome 1 CDS492023 513 - 0.660819
TTHA0544 conserved hypothetical proteinchromosome 1 CDS509022 237 + 0.624473
TTHA0574 probable DNA polymerase III epsilon subunitchromosome 1 CDS541898 744 + 0.716398
TTHA0623 DNA repair protein RecOchromosome 1 CDS594860 690 - 0.724638
TTHA0651 hypothetical proteinchromosome 1 CDS619859 267 + 0.692884
TTHA0718 uracil-DNA glycosylasechromosome 1 CDS681470 618 - 0.665049
TTHA0721 conserved hypothetical proteinchromosome 1 CDS683597 567 + 0.737213
TTHA0813 DNA polymerase III epsilon chain-like proteinchromosome 1 CDS776074 1875 - 0.728
TTHA0834 endonuclease IVchromosome 1 CDS799876 813 - 0.710947
TTHA0863 MutT/nudix family proteinchromosome 1 CDS824339 549 - 0.684882
TTHA0883 probable transposasechromosome 1 CDS840968 519 - 0.672447
TTHA0884 probable transposasechromosome 1 CDS841486 516 - 0.678295
TTHA0889 transcription-repair coupling factorchromosome 1 CDS845828 2937 + 0.695608
TTHA0921 transposase (probable DNA-binding protein 1A)chromosome 1 CDS873211 954 - 0.68239
TTHA0928 methyltransferasechromosome 1 CDS878529 558 + 0.72043
TTHA0974 integrase/recombinasechromosome 1 CDS917491 942 - 0.705945
TTHA0998 ATP-dependent DNA helicasechromosome 1 CDS942364 2574 - 0.74087
TTHA1016 conserved hypothetical proteinchromosome 1 CDS961791 2745 - 0.652823
TTHA1018 transposasechromosome 1 CDS966074 1221 - 0.646192
TTHA1020 conserved hypothetical proteinchromosome 1 CDS967685 3333 - 0.668167
TTHA1027 DNA integration/recombination/invertion proteinchromosome 1 CDS976892 1176 + 0.69983
TTHA1054 DNA polymerase Ichromosome 1 CDS996840 2505 + 0.678643
TTHA1090 Holliday junction resolvase RuvCchromosome 1 CDS1037164 501 + 0.714571
TTHA1097 DNA ligase [NAD+]chromosome 1 CDS1042879 2031 - 0.663712
TTHA1149 uracil-DNA glycosylasechromosome 1 CDS1094657 660 + 0.716667
TTHA1167 single-stranded DNA specific exonuclease RecJchromosome 1 CDS1109423 2001 + 0.728136
TTHA1260 DNA primasechromosome 1 CDS1199805 1773 + 0.71348
TTHA1266 DNA helicase RecGchromosome 1 CDS1207342 2313 + 0.69693
TTHA1269 transposasechromosome 1 CDS1211008 1221 + 0.643735
TTHA1284 serine/threonine protein kinase, putativechromosome 1 CDS1223654 615 + 0.710569
TTHA1288 exonuclease SbcCchromosome 1 CDS1228724 2901 - 0.74595
TTHA1289 exonuclease SbcDchromosome 1 CDS1231605 1119 - 0.72118
TTHA1323 DNA mismatch repair protein MutLchromosome 1 CDS1260152 1638 - 0.728327
TTHA1324 DNA mismatch repair protein MutSchromosome 1 CDS1261786 2460 - 0.693089
TTHA1347 endonuclease Vchromosome 1 CDS1288454 681 + 0.759178
TTHA1349 DNA-binding protein HU (DNA-binding protein II)chromosome 1 CDS1289898 294 + 0.629252
TTHA1350 conserved hypothetical proteinchromosome 1 CDS1290216 843 - 0.740214
TTHA1355 DNA gyrase subunit Achromosome 1 CDS1294527 2418 + 0.682382
TTHA1370 serine/threonine-protein kinase-related proteinchromosome 1 CDS1306976 762 + 0.723097
TTHA1426 hypothetical proteinchromosome 1 CDS1353891 723 - 0.755187
TTHA1427 UvrD proteinchromosome 1 CDS1354610 2079 - 0.712362
TTHA1440 excinuclease ABC subunit A (UvrA)chromosome 1 CDS1366645 2859 + 0.682406
TTHA1449 putative hydrolase, TatD familychromosome 1 CDS1377193 756 + 0.718254
TTHA1470 replicative DNA helicase DnaBchromosome 1 CDS1400048 1335 - 0.686891
TTHA1521 conserved hypothetical proteinchromosome 1 CDS1446390 921 - 0.7481
TTHA1525 DNA repair protein RecNchromosome 1 CDS1450514 1587 + 0.747952
TTHA1537 conserved hypothetical proteinchromosome 1 CDS1463279 1605 - 0.637383
TTHA1539 putative phage integrase/recombinasechromosome 1 CDS1465735 882 + 0.647392
TTHA1548 excinuclease ABC subunit C (UvrC)chromosome 1 CDS1473944 1773 + 0.695431
TTHA1556 ribonuclease H (RNase H)chromosome 1 CDS1480725 501 + 0.688623
TTHA1564 putative methylated-DNA--protein-cysteine methyltransferase (Ogt)chromosome 1 CDS1487635 444 - 0.734234
TTHA1583 site-specific DNA-methyltransferase (adenine-specific) TthHB8Ichromosome 1 CDS1506201 1287 + 0.602953
TTHA1586 DNA gyrase, subunit Bchromosome 1 CDS1508748 1905 + 0.673491
TTHA1594 serine/threonine protein kinasechromosome 1 CDS1515942 1959 - 0.718224
TTHA1600 RecR proteinchromosome 1 CDS1522958 585 + 0.731624
TTHA1645 MutS2 proteinchromosome 1 CDS1559701 2235 - 0.705145
TTHA1776 hypothetical proteinchromosome 1 CDS1663939 309 - 0.682848
TTHA1806 MutM protein (formamidopyrimidine-DNA glycosylase) (Fpg)chromosome 1 CDS1684475 804 + 0.747512
TTHA1818 RecA proteinchromosome 1 CDS1701658 1023 - 0.702835
TTHA1829 conserved hypothetical proteinchromosome 1 CDS1711028 408 - 0.703431
TTHA1860 DNA polymerase III delta prime subunitchromosome 1 CDS1743712 807 - 0.738538
TTHA1867 transposasechromosome 1 CDS1750258 1221 + 0.643735
TTHA1880 MutT/nudix family proteinchromosome 1 CDS1765410 381 - 0.708661
TTHA1884 probable ATPasechromosome 1 CDS1767832 1266 + 0.718799
TTHA1892 excinuclease ABC subunit B (UvrB)chromosome 1 CDS1775514 1998 - 0.661161
TTHA1898 A/G-specific adenine glycosylase (MutY)chromosome 1 CDS1784531 978 - 0.717791
TTHA1939 MutT/nudix family proteinchromosome 1 CDS1819304 468 - 0.730769
TTHA1947 MutT/nudix family proteinchromosome 1 CDS1824153 468 + 0.679487
TTHA1952 DNA polymerase III holoenzyme tau subunitchromosome 1 CDS1828653 1590 + 0.721384
TTHA1967 competence protein ComEA-related proteinchromosome 1 CDS1841799 228 + 0.710526
TTHA1973 chromosomal replication initiator protein DnaAchromosome 1 CDS1848185 1311 + 0.674294