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2024-05-21 04:23:02

Gene list

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COG category: Replication, recombination and repair
Genomic element: pSS_046

Number of genes found: 115

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSO_P140 IS629 ORF2pSS_046 CDS123268 564 - 0.558511
NA SSO_P137 putative reverse transcriptase, fragmentpSS_046 CDS122667 240 - 0.520833
NA SSO_P139 IS3 ORF2pSS_046 CDS123053 243 - 0.559671
NA SSO_P200 conserved hypothetical proteinpSS_046 CDS177847 462 + 0.478355
NA SSO_P034 conserved hypothetical proteinpSS_046 CDS29838 600 - 0.468333
NA SSO_P010 conserved hypothetical proteinpSS_046 CDS8476 585 - 0.521368
NA SSO_P130 IS629 ORF2pSS_046 CDS117727 453 + 0.543046
NA SSO_P141 IS629 ORF1pSS_046 CDS123938 219 - 0.538813
NA SSO_P064 ISSfl1 ORF2pSS_046 CDS61000 390 + 0.515385
NA SSO_P054 ISSfl1 ORF1pSS_046 CDS50243 471 + 0.5138
NA SSO_P236 putative transposasepSS_046 CDS207903 270 - 0.451852
NA SSO_P001 putative resolvase, fragmentpSS_046 CDS485 465 + 0.507527
NA SSO_P154 IS2 ORF1pSS_046 CDS136883 366 - 0.530055
NA SSO_P172 putative IS orfpSS_046 CDS149825 243 + 0.55144
NA SSO_P076 IS1353 putative transposase-like proteinpSS_046 CDS70733 423 + 0.503546
NA SSO_P073 IS600 ORF1pSS_046 CDS69155 303 + 0.465347
NA SSO_P071 ISSfl4 ORF1pSS_046 CDS66360 588 - 0.493197
NA SSO_P122 putative transposasepSS_046 CDS112382 756 + 0.507937
NA SSO_P013 IS21 ORF2pSS_046 CDS11667 180 - 0.433333
NA SSO_P123 IS600 ORF2pSS_046 CDS113272 189 + 0.460317
NA SSO_P036 IS21 ORF1pSS_046 CDS31617 1149 + 0.531767
NA SSO_P021 putative transposase, fragmentpSS_046 CDS16197 171 + 0.461988
NA SSO_P163 IS21 ORF1pSS_046 CDS142748 927 - 0.538296
NA SSO_P077 IS21 ORF1pSS_046 CDS71276 336 + 0.565476
NA SSO_P138 putative reverse transcriptase, fragmentpSS_046 CDS122938 201 - 0.562189
NA SSO_P046 ISSfl2 ORFpSS_046 CDS41773 546 - 0.57326
NA SSO_P012 IS630 ORFpSS_046 CDS10630 1032 + 0.530039
NA SSO_P162 IS21 ORF2pSS_046 CDS141951 798 - 0.526316
NA SSO_P035 conserved hypothetical proteinpSS_046 CDS30380 585 - 0.488889
NA SSO_P146 IS629 ORF2pSS_046 CDS130607 606 + 0.537954
NA SSO_P173 IS4 ORFpSS_046 CDS150124 1329 + 0.542513
NA SSO_P018 ISSfl4 ORF2pSS_046 CDS13793 348 + 0.566092
NA SSO_P029 putative transposasepSS_046 CDS24497 1128 + 0.493794
NA SSO_P165 IS600 ORF2pSS_046 CDS144374 714 + 0.519608
NA SSO_P081 ISSfl2 ORFpSS_046 CDS73542 1197 - 0.578112
NA SSO_P176 conserved hypothetical proteinpSS_046 CDS152009 2913 - 0.509097
NA SSO_P038 IS629 ORF2pSS_046 CDS33890 888 - 0.540541
NA SSO_P016 putative transposasepSS_046 CDS12798 285 + 0.536842
NA SSO_P061 IS629 ORF2pSS_046 CDS57898 888 + 0.540541
NA SSO_P134 putative transposase, fragmentpSS_046 CDS120751 228 - 0.464912
NA SSO_P153 IS2 ORF2pSS_046 CDS136020 840 - 0.546429
NA SSO_P155 putative IS orf, fragmentpSS_046 CDS137447 219 - 0.420091
NA SSO_P132 IS21 ORF2pSS_046 CDS119425 798 + 0.525063
NA SSO_P006 IS630 ORFpSS_046 CDS3729 1032 + 0.528101
NA SSO_P152 IS600 ORF2pSS_046 CDS135678 201 - 0.527363
NA SSO_P119 IS600 ORF2pSS_046 CDS109478 621 - 0.521739
NA SSO_P002 IS2 ORF2pSS_046 CDS275 219 - 0.479452
NA SSO_P075 putative IS orfpSS_046 CDS70436 243 + 0.497942
NA SSO_P218 IS630 ORFpSS_046 CDS190993 192 + 0.510417
NA SSO_P161 conserved hypothetical proteinpSS_046 CDS141439 474 + 0.582278
NA SSO_P210 ISSfl1 ORF2pSS_046 CDS184802 225 + 0.52
NA SSO_P074 IS600 ORF2pSS_046 CDS69598 714 + 0.519608
NA SSO_P042 putative transposasepSS_046 CDS38511 1128 + 0.493794
NA SSO_P127 putative transposase, fragmentpSS_046 CDS116456 201 - 0.472637
NA SSO_P033 putative transposase, fragmentpSS_046 CDS29064 486 + 0.450617
NA SSO_P043 IS2 ORF2pSS_046 CDS40072 288 + 0.503472
NA SSO_P026 IS3 ORF2pSS_046 CDS20174 870 + 0.556322
NA SSO_P063 ISSfl1 ORF1pSS_046 CDS60545 450 + 0.526667
NA SSO_P221 IS630 ORFpSS_046 CDS192788 276 + 0.507246
NA SSO_P184 putative transposasepSS_046 CDS161897 669 + 0.536622
NA SSO_P080 IS2 ORF1pSS_046 CDS72928 366 - 0.530055
NA SSO_P037 IS21 ORF2pSS_046 CDS32765 798 + 0.526316
NA SSO_P216 IS600 ORF2pSS_046 CDS189552 714 - 0.519608
NA SSO_P039 IS629 ORF1pSS_046 CDS34777 276 - 0.550725
NA SSO_P189 IS600 ORF2pSS_046 CDS165512 714 + 0.521008
NA SSO_P186 IS186 ORF1pSS_046 CDS163371 717 + 0.482566
NA SSO_P045 ISSfl2 ORFpSS_046 CDS41178 417 - 0.604317
NA SSO_P164 IS600 ORF1pSS_046 CDS143931 303 + 0.462046
NA SSO_P145 IS629 ORF1pSS_046 CDS130009 327 + 0.541284
NA SSO_P056 IS630 ORFpSS_046 CDS51223 1032 + 0.52907
NA SSO_P175 IS3 ORF2pSS_046 CDS151803 219 + 0.575342
NA SSO_P150 hypothetical proteinpSS_046 CDS134323 246 - 0.528455
NA SSO_P131 IS21 ORF1pSS_046 CDS118277 1149 + 0.531767
NA SSO_P178 IS600 ORF2pSS_046 CDS155687 714 + 0.519608
NA SSO_P151 putative reverse transcriptase, fragmentpSS_046 CDS134538 1128 - 0.548759
NA SSO_P019 putative IS orf, fragmentpSS_046 CDS14160 1233 + 0.559611
NA SSO_P068 ISSfl1 ORF2pSS_046 CDS64523 363 + 0.53168
NA SSO_P239 IS911 ORF2pSS_046 CDS209915 858 + 0.547786
NA SSO_P027 IS100 ORF1pSS_046 CDS21831 1005 + 0.527363
NA SSO_P121 putative transposasepSS_046 CDS110830 1536 + 0.540365
NA SSO_P066 ISSfl1 ORF1pSS_046 CDS63417 297 + 0.498316
NA SSO_P177 IS600 ORF1pSS_046 CDS155244 303 + 0.465347
NA SSO_P055 ISSfl1 ORF2pSS_046 CDS50719 390 + 0.515385
NA SSO_P120 IS600 ORF1pSS_046 CDS110239 303 - 0.458746
NA SSO_P079 IS2 ORF2pSS_046 CDS72065 840 - 0.546429
NA SSO_P235 IS629 ORF1pSS_046 CDS207506 276 + 0.550725
NA SSO_P217 IS600 ORF1pSS_046 CDS190406 303 - 0.462046
NA SSO_P051 IS600 ORF2pSS_046 CDS48324 531 - 0.53484
NA SSO_P188 IS600 ORF1pSS_046 CDS165069 303 + 0.465347
NA SSO_P028 ISSfl2 ORFpSS_046 CDS23027 1197 + 0.578112
NA SSO_P125 IS3 ORF1pSS_046 CDS113837 300 - 0.526667
NA SSO_P133 IS629 ORF2pSS_046 CDS120320 429 + 0.5338
NA SSO_P194 IS600 ORF2pSS_046 CDS174125 714 + 0.521008
NA SSO_P017 IS4 ORFpSS_046 CDS13093 573 - 0.521815
NA SSO_P183 IS630 ORFpSS_046 CDS160722 1032 - 0.527132
NA SSO_P157 IS100 ORF2pSS_046 CDS139323 234 + 0.491453
NA SSO_P124 IS3 ORF2pSS_046 CDS113457 384 - 0.575521
NA SSO_P052 IS600 ORF1pSS_046 CDS48995 303 - 0.465347
NA SSO_P129 IS629 ORF1pSS_046 CDS117401 327 + 0.544343
NA SSO_P192 oriT nicking and unwinding protein, fragmentpSS_046 CDS169342 4284 + 0.594538
NA SSO_P025 IS3 ORF1pSS_046 CDS19878 300 + 0.53
NA SSO_P228 IS630 ORFpSS_046 CDS199692 1032 + 0.528101
NA SSO_P174 putative IS orfpSS_046 CDS151463 243 - 0.54321
NA SSO_P193 IS600 ORF1pSS_046 CDS173682 303 + 0.462046
NA SSO_P128 conserved hypothetical proteinpSS_046 CDS116887 333 - 0.525526
NA SSO_P082 IS100 ORF1pSS_046 CDS74930 1005 - 0.527363
NA SSO_P166 putative IS orf, fragmentpSS_046 CDS145341 255 + 0.568627
NA SSO_P060 IS629 ORF1pSS_046 CDS57572 327 + 0.541284
NA SSO_P030 iso-IS1 ORF2pSS_046 CDS26092 216 + 0.527778
NA SSO_P149 conserved hypothetical proteinpSS_046 CDS133712 528 - 0.460227
insB SSO_P160 IS1 ORF2pSS_046 CDS140818 504 + 0.543651
insB SSO_P203 IS1 ORF2pSS_046 CDS178862 504 - 0.543651
insB SSO_P067 IS1 ORF2pSS_046 CDS63936 504 + 0.543651
ipaB SSO_P090 IpaBpSS_046 CDS84468 1743 - 0.378084
spa32 SSO_P113 Spa32pSS_046 CDS104158 879 + 0.312856