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# Methylococcus capsulatus str. Bath, Bath

>MCA1993 deoxyribonuclease, TatD family
MNRISRPIPCKLCRQRPASPLASNPMFIDSHAHLDRLDLKPFGGDFSRFM
EAAGAEGVDRMLCVAINLDDYPAMRRLVEPYPNVCVSVGVHPNETDTEEP
SAERLAALADDDRVVAIGETGLDYFRSAGDLAWQQERFRIHIRAAKLIGK
PLIVHTRDSRSDTLRILAEEEAGEVGGVFHCFTEDWDTARRALDLNFSIS
FSGIVTFRTAETIQDVARRVPDERYLIETDSPYLAPVPLRGKPNYPQHVR
HVAGMIAELRGASLGEVADRTTRNYYTLFGNG
>MCA0906 ISMca2, transposase, OrfA
MSDKQVRAQYTREFKLEAVRQVRAGQAIAGVAKVLGIPKASLGNGVRLAA
KGALGGSGGSDKADRVSPEQMEIARLRAEVARLRMERDIAKKAAAYFAQD
TLRGTPGLTQ
>MCA0930 CRISPR-associated protein Cas1
MSGLFSGRLGLAESRIPHADRHGLLWLTFGNLTVEDGTLHFRAAPSEWMD
AGDYAIPYQGLSMILLAPGTTVSHDALRLLARHGTLLAAVGDGGVKFYTA
PPMGQGRSDVARAHARLWADEKARLDVARHMYAFRFGRILPHKDIAVLRG
IEGARVKETYQLLANQHGVEWKGRRYDRNNPNAADIPNQAINHAATFVEA
AADVAVAAVGGLPPLGFIHEESSNAFTLDIADLFRAEVTLPLAFSVAKRV
MDDPSLPLERALRKEAARQFHKQKVIPKMIDRIKELLHVDDGNGDA
>MCA0823 ISMca4, transposase, OrfAB
MKKSKFSDSQIIEALKRVEAGLSVPELCRELGISTAAFCKWRAKHGGLAV
SMMARMKELEAENARLNEDARGGAPEGRHSSGGDFKKVVRPSHLRATARR
AVSGHRVSIRLGCAAFQVSGTCYRHSAKRNAGNEEIADWLMRLTDNHRNW
GFGLCFLYLRNVKGFGWNHKRVCRICRELELNLRIKPRKRLKRDKPEPLT
APTRINQVWSMDFMHDQRADGRKFRLFNVIDDFNRASLGMEVDFSPPSER
VTRALEQVMEWRGRPRVIRCDNGPENISAKVQARAARQGIRIECIQPGNP
QQNAHVERFNRTVRHEWLSQYDWESLDEVQAFATRWMWTYNHERPNMALG
GITPKQRLARAA
>MCA2654 prophage LambdaMc01, DNA methyltransferase
MHSETQVAKIAASIVEYGWTSPILVDGDNGIIAGHGRLAAARKLGLAEVP
VIELAHLTPTQKRALVLADNRLALEAGWDEELLALELAELSDAGYDLALT
GFDDGEIEAFLSEPQPHEDTSAEADAGKDDTTDDVPDAPVVPVSRPGDVW
CLGSHRLICGDATDPAVVAALMRGERAKLCFTSPPYGNQRDYTTGGIADW
DALMRGVFGHLPMAEDGQVLVNLGLIHRDNEVIPYWDAWLGWMRAQGWRR
FAWYVWDQGPGMPGDWAGRFAPSFEFVFHFNRQSRKPNKIVPCKHAGQDS
HLRADGSSTAMRNKDGEVGGWTHAGLPTQDTRIPDSVIRVMRHKGKIGKG
IDHPAVFPVALPQFVMEAYSDEGAVVFEPFGGSGTTMLAAERTGRVCRSV
EIAPEYVDVAIKRFQQNHPDVAVTLLASGQSFAEVAAEREREAEVVA
>MCA2955 putative prophage MuMc02, transposase protein A
MKLIQAREKEAQRQASLAAELAALESSPEYRAGQAIARQMAEASAREAEA
RQQDDEALLALFAQATGERGERGRAWLATIQCWRRFYREKFGDQKRSQEK
ALIAFIKAFNAGALDLDGEVYAPVLKSSGRGKNAQGKGLSLRTLKRKLGL
IKKSNIGALLDNHKSPRRGDSLIHQQPRLEQYMLGLLAQQPDIAAVRLHE
MAENRFAGDATIKVPSYSAVDRYVKNWKAKNASAYLHLRNPDAWKNKAMP
AVGLADGDVVRLNQRWELDSTLGDLLLSDGKRHAVIGVIDVYSRRLKLLV
APTSKARAIAAVVRRAMLDWGVPEQAKTDNGADYASDYLTGIWDAFGVEH
VLCPPFSPEYKPHIERALGTFNHDLVELLPGYIGHDVAERKAIEARKSFA
RRLMEKDGVLEVRLSPEELQKFCDDWTENRYHHRPHAGLEGETPFQRAAS
YRGEIRRIHNERALDILLSPPVDGKTRSLGKKGLEIHGGFYSHPELWRHH
TTGDAFRVMVDETDLGRVYAYDDNGFVCVAICPERLGLPPEAVSRHAMEC
KRMAAQQRNQGMKTLNRAKKGVDLNAEINSYLRSKAESAGKLATFPQLST
GYTTPALEGAARAAESTDRPPRSPEAEKLSAEAKAHFAASGRSAEIIKLP
KRKEHPLERMSDEEKYEFWCSLDAAVKAGGGELPDDAQVRRFYAEFPLSA
RFKAQAAIR
>MCA2164 putative DNA polymerase III, alpha subunit
MACSAEAVFAELHALSNFSFLRGASHPKELVAEAARLGYAALALTDECSL
AGVVRAHAEAKTLGFKLIIGSEFRLEDGPKLVLLAMDRRGYGQLAAFITL
GRRAAEKGEYRLLRGQLETHPLDQCIAIWLPEDAPDDETGAWLARLFPAR
CWIGVELFLSGGDGLRLSVLQALGERLGLPLVACNDVHMHARERQPLQDT
LTAIRLGRPLAELGYALFPNGERHLRPIEFLARIYPRALLEESLRIAERC
RFSLDELRYEYPAELVPDGYTAIAWLRELTRQGMAERWPEGAPDKVRRQV
EHELELIGAMAYEPFFLTVHDVVRFARSRGILCQGRGSAANSAVCYCLGI
TEVDPARLDLLFERFISRERNEPPDIDVDFEHERREEVIQYIYRKYGRHR
AALAASLITYRVRSAVRDVARALGFSPSRIDTLARVLDRHGVAETLPERL
AEAGLASENPAVRRLLALMQMLVGFPRHLSQHVGGFVIAAEDLSHWVPVE
NAAMPERTVIQWDKDDLESLGLLKVDVLSLGMLTAIRKALAYVGEGRGRP
FTLADVPPEDPAVYEMLQRADSIGVFQVESRAQMSMLPRLRPQSYYDLVI
QIAIVRPGPIQGDMVHPYLTRRAGLEPVSYPSPAVEKVLKRTLGVPIFQE
QVMQLAMVAAGFTPGEADRLRRAMAAWHRKGGLEPFEKKLMDGMRERGYE
ERFARQIYRQIRGFGEYGFPESHSASFALLAYVSAWLKCHHPAAFACALL
NSQPMGFYGPSQLIQDARRHGVEVRPIDVNHSDWDCTLEPTEIPNPLSLW
ERVGVRALQTGSNPALRLGLRLVNGFSSAAAQRLSDARRQGPFQSIQDLA
TRVPLDRRELEALAAADALHGLGGHRHRAFWEAAGVEAPTPLYAEPQFAE
AEPLLRKPGEAEDVIADYAAAGASLRRHPLSLLRERLDRRGFRTAEALWQ
VRNGAIARVAGLVVCRQRPMTANGTTFVTIEDETGQINLIVWPATAQAQR
RALLRAHLLAVSGTVQQEEGVLHLVAGRLEDIGKWLDGLVVKSRDFQ
>MCA0723 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA1177 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA1580 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA0877 exonuclease
MTKIKAGEIYVSVDIEADGPIPGPHSMLSIGAVAYGAQGDLLGEFTVNLE
TLPGAAPHPAMAEWWRQFPEAWNAHRRNTRPPAEAMNAFADWLEELPGKP
IFLAWPATWDFMWIYWYLICFTGRRPFSEHGIDVRSYAMGMRRQTFGKSG
KNYLPKRWSSPHPHTHIALDDAREQGDLFIAMLRENLGIKSE
>MCA2144 putative lipoprotein
MSAKPFSDSRPGIVLPAALAVWVSGCATTDCDPGQGGFFRGLGCSASGSY
GQRQQQMQASLDREQQTQAGLQSRYAQANQAAIESDAQRQAAEEEYAGLQ
RDIDALNARLAQSKSKKKDLSREIRSVQNQLDLLKADTMSPRAELDKRRA
ELDRRLKELEREVDLARGK
>MCA0641 site-specific recombinase, phage integrase family domain protein
MALTDAAVRNAKRSGGKACELSDEKGLYLIVTVKGGKWWRLDYRHDGKRK
TLSLGT
>MCA0650 CRISPR-associated protein Cas2
MLILVSYDVSTETAAGRRRLRHVAKVCLNYGQRVQKSVFECKVNLAQMET
LKAELLDEIDEKEDSLRIYRITEPLEKNLMEFGKFKAVDFEDTLIV
>MCA1593 Staphylococcal nuclease homologue
MADTSLSGTVSAVLDGDSIIVVDAGRREVEVRLAQIDAPEHGQADWQASR
QSLSELLLGRTVTVERVDADRYGRIVGRVWEEGTDAGLEQVRRGMAWVYR
RYTADQAYFRAEERARQEKKGLWSQPRPVPPWRFRHRAASSGSDPRRSPA
DRVSPCGAKHRCAEMLSCEEARFYLVRCGVKSLDRDGDGTPCEELC
>MCA0651 CRISPR-associated protein Cas1
MTVLQNTLYVTTPEAYLRLEGETVCVMIEEQKRLQVPLHHLSAFVLFDHV
MLSPALLGRCAEDGRSVVWLDRAGRFRARLEGPVNGNILLRQAQFRAAED
GAQTLGLARAVLAGKLRNSRQLLMRGARETDDVVERDALVRAAKLIANQV
RKLPLAQDLDTLRGLEGDVARLYFEALPKVMRAKARAEFPFDCRNRRPPR
DRFNALLSFLYALVLSDCRAALETVGLDPQLGFLHAVRPGRPALALDLLE
EFRAPLADRLALTLVNRGQLQASDFDEREGGAVLLNDKGRKTVIAAYQTR
KQEAITHPLLKQTLPIGLLPHWQARLLARYLRQDVAHYVPYLHR
>MCA1514 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA1631 hypothetical protein
MSWGLRRKARGLARRFDGARARARLPALQARLSETEALVQSLLPRLDLPR
SQQSPTLRAVRKAALEELPALLNHYLELPEHYAASHRLDDGRTPEQQLVA
ELDTLEQSLRQVAFETFSERFARTAGNLDQLREQFDEDPAATVRVRLENL
QNRIAGRLDPEAEARIASIGESLLAALDRLLRTAHEADPMLYDVRRIALE
YLPDAVEHYLALPADLARTEPLLHGKTAQAVLHEQLDVLDQSLRQMLNSL
YRDDAQAIAVHARFLKDKFDRWQTGWGS
>MCA1197 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA0551 conserved hypothetical protein
MFDTRTHTRRVEELELVNRIRERVDEWRDAGFPGITSVTRRLLEHWHDRE
ARPLPFYFCQLEAIETLIWWVEGPQEFKQGIYLPGDGGPWERVCNKMATG
TGKTTLMGLIITWQVSNALTYPKRKEFSAAIFVVAPGLTVKERLQVLHPG
HGKNVYDEFRLCPNEAMRQKINQAALRVENWHTLMPLKEPDRSVVKKGAE
SDEAFTRRVLGKLAGYRDIVVINDEAHHAYRQRAELKVSKKEAEELGIDL
DEATRWIEGLDRIHRTRRIRRCFDLSATPFAPTGKKSTEKGLFDWIVSDF
GLNDAIEAGLVKTPRVVVRDDALANAQSYKSKLYHLYDEAEVKEDLNRKA
GPHEPLPDLVQKAYALLAHDWRETARRWREAGHDTPPVLLTVCNRTETAA
RIERFFNGGDCPIGETREPDRTLRVDSKVLEKAERGESVTRDKDYAERLE
AIIRAAGLPDDERDDLLGAKQEEQLRALVDTVGKRGKPGQRLQNVISVAM
LSEGWDAANVTHIMGLRAFTSQLLCEQVIGRGLRRVAYERDEDGLFLPEY
VNVFGVPLSIFQDVGEGGEPPPPPKPSIQVEVVPGRQPLEIRWPNVLRVD
TVLRPTLVMDWEAVTPLTLDPMQTPIHAEIAPALAGQADLSKVSEIDLEK
AAAEFRLQNLVFRAARKLYLQSADVFAADKQYLAVQLIRLVEQFLAGDRL
HIPSLWHRDPLRRRLLLAMNMDTVVGHVSRFVQVQNTEKLAACFDQENPI
GSTAFMRTWYTTRPCAPIRKSQISHVAYDSVWEKAVADLCETEPAVLAWA
KNDHLDFKVRYLYRGSSRNFVPDYLIRLSNGKTLVLEVKGRDSERNRAKR
AAMEIWVKAVNEQGGFGRWCFSVVFEPARMRDTLLLHAG
>MCA2086 MutT/nudix family protein
MIDAEGYRLNVGIILSNDEGRVFWARRAGMRSWQFPQGGIKVDEDPDAAM
FRELYEEVGLERQYVEIIARTKGWLRYQLPERFIRRRSYPLCIGQKQIWY
ILRLTGTDANIRLDCSERPEFDRWCWVDYWHPLSDVVYFKREVYRQALSE
LQRALQAGRPAGAQAVSDAGGTATRQIPVATEPSGPSSSQR
>MCA0032 ISMca6, transposase, OrfB
MPSTFKKTVETVLATGNDLLVQLKGNHPKLLAAVRTLCQSRAHAEQSYTV
DLGRRNRIEQRTVRLWPLPPGSGTDPWHDHFQTVIEGQRQIEVFNPYHRR
FEPRQESPAYYLATCTASAATLAQVIRGHWAIENRLHHVLDVSLGEDSSR
IRRNPGVFALLRHFALNLLRHNGQANIRSALYDNAICLHRLLAYDGI
>MCA2522 DnaA domain protein
MAQQIPLHFAVDPLQTFEAYWAGPNAEAAEAARRSARGEGDTLLYLWGDT
GLGKTHLVNAACREAFHNGRSAACLPLALIGECGPAVLEGMENQNLVCLD
DIDTIAGRDDWERQLFGLFNAMRDAGNTLLITATAPPAELPVALPDLKTR
LAWGLVLRLHPLTDEHKLAALERRAGMLGLDLSPRVGRFLLSHCRRDMAS
LQALLEELDHASLAAKRRLTVPFIKGYLEDIA
>MCA0733 putative transposase
MPPAAKTPSGTFKASAPGFLHVDVTRRATKLKSLPQMQDETSRRYLFVAI
DRATRWVFIQVKPNKTAAAQAFLKALHKACPSKITKLLTDNGKDKIAWSD
FGPRSGSRRDEPQGRGEQFTDRLFGSRSQAPSAEHEFDPLCHAWGIEHRL
TPPRSPQANGRVERFNGRIADILKTHHFDSALDLEQTLHRYVTLYNDNLP
QSALVSQTPIQSMKAWYKSHPDLYSSAYL
>MCA0342 MutS family protein
MESIDIRGYPTILKSDGREPPKIPSVAPGRTGAAVLDEQAFRVIEVDKLF
EAADHATTAIGRAVLYRSLAQPPVDAGLIRAKQEAVRELERNAELRTGLE
VLLAEAAKLEGEFYNLLYAQFLGLIGSPAHPLEIDGYGYATYIKGTRFML
ELVERANRLPEPDSAYLKALVREVRDFARSRAYALMKGPVYRTERRVCTR
AEKGWFTPGIRFRPSLFKPVGLTVTVLLFLAAMEFLPFALDIAASIAPVF
WLFLLPLGFVYVPIVGGMDRDGIIYPLREVYRRSEEVQATLDTLGQLDEL
MSFIRFRESFGHFMTLPAILDGERHRMSLRGVRNPVLAKNDPLYVPNDID
LTEQRLTFITGPNSGGKTAFCKTLAQVQILAQAGCYVPAERAELTVADRV
FYQVPEISHLTDGEGRFGTELKRTKDIFLASTPRSLVIMDELSEGTTNEE
KMDISVAILDGFREKGNTTVLITHNHELVDVYQGRRIGQARQVEFRNEQP
TYRLIEGVSRVSHADRIARKIGFSREDIARYLQGKP
>MCA2810 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA2684 conserved domain protein
MESVDFSDPGRPKTCLEVDFPILPVNQVAVIEGNAGKPIYQMSKWWARRR
SSVFRSMLIAAAAKAPDDPAHAARLVWDNYYANHQKKGSFKHLKVADIFM
GGGTTLVEGSRLGMQMVGNDLNPVAWFVVKQELANVDLGEVKKLLADVEA
EVKPQIMPYYYCDGPEGEKGTWTHLPTKKVMPADFDPLVIPRDERKDYRY
EGPEIIYTFWAKHGPCQVTGCGHRTPIMSSPVMAVKTLSVKHWEHTCGKC
GGEFHVEEEAARMAPDVPLYVAPSEYPFSVLDRKKGVICPHCGHTALVNL
GKGKNKKVELSLLVHPQWLAGEAKQDVSGQPYGGSAQDDAASTARWNHAR
AAKIRLLEVRGALPDQVTCPETGVTFRTDKGTVPKKSNYACGACGTAQDV
LTTVKASGKTGPMAAYAVQGYAPKRDEARKPYNGRFFAPLDERLARQYDA
ASEEWEARKDTDLKDYWPRSAVPYGFMTGIANGDIREGHGFTHWWTMFNP
RQLLVHAQLLKAIVEVGNYDWTVREYVLGAFQQYLRNQCLFSFWNPQRDT
PEPMFSNNNYHPKSTVVENCVFPALGRGNWASSVEGILEGRDWAIDPWEA
VSAEALRRKDNALAGEISGKSEKVFPGDPVGDVTVFQGSSTDLARIEAGS
LDLVITDPPFGGLLHYSELADFFYVWLRLVLKGKYPEYFSADYTPKSLEA
VANKAREPEDPDGFYQRLLTQCWREAHRILKPGGILAFTFHHSEDEPWVA
VLESLFDAGFYLEATYPIRSDETKGEGEFGSKTIEYDIIHVCRKRTEEPK
PVSWGRMRREVMADVRQLQAMLENHAKEGLPAADIQVIRRGKALEYFSRH
YGKVYVDEGRTITVKDALVGINQLIDEDADKGKEPPPVNAEPITRQFLRT
FGAAGELKRDQLQKFLRGTITTPDDFVQRGWCAEKNKVFTRTNPLDFARE
WSGKHRRRLTSDLDQALVLIGACFDGSGINASDTLKNENFKPHVALKPLL
EWLHRNGPEQATRNAASRAVSIYNTWHASQAVKPTQGSLFEEYEL
>MCA0307 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA1630 DnaA domain protein
MHPETPNPSFRFSNFIEARSNNKAGTAALRVARNLGPASVPMVIWGAAGL
GKTHLLQAIGNERLRLNPAARIVYQSGDGFEADLAAALQQGAVAGFRSRY
ESADLLLFDDVQRLAGKVRAQAELVWLFDALLESLRSIVLAGDRSPYDMT
GVAGDLKTRLNLGLSVSIEPPDLETRAAVLMQKARTWGIDLPPEVAFFLG
RRIRTDLAELERALLRLAACARQPITLETAAWELRHVIALPERMITVERV
QAAVADHFGIAPGDLLSNRHALPLQLAMALCLELTDHGLEEVGPRFGGRD
AAAVLLACREAQTARETDARFRDDFSHLLGILAL
>MCA3005 ATP-dependent RNA helicase, DEAD/DEAH box family
MLKLEQIQKNAAISGLEPGQVVRIVTTEPVGPDALTVYYKTADGKLLERM
LFRTDEAKLSLAESGRPWAFDAPGEEFKLALEAYRINLAHLFDPMMAVHT
SNVEPLPHQITAVYESMLPRQPLRFVLADDPGAGKTIMAGLYIRELLIRA
DAKRVLIVAPGSLVEQWQDEMFEKFGLSFSLFSREQVEQSRSGNPFDDID
LLVARVDQLARAEDLQEKLLLTHWDLVVVDEAHKLSASYYGNEVKKTKRF
QLGELLGSITRHFLLMTATPHNGKEEDFQLFLSLLDADRFYGKFRDGAHK
VDVTDLMRRMVKEDLLKFDGTPLFPERRAYTVNYKLSDREAALYAAVTDY
VKEQFNKADQLADGGRKGTVGFALTSLQRRLASSPEAIYQSLKRRRHKLK
RRVEEEKLGQRGKALAETLAGTGINGVPEDIWESADALSPDDYENFEEAV
VDQATAAQTIQELEAEILILEALEEQARQVVHSGQDRKWEELSRLLQDTP
DRSAGLPICTPVGRRTAGPVMDGRPEMHDAAGRQRKLIIFTEHRDTLNYL
ATKIRGLIGSIDAVVMIHGGVKREERRKVQELFRNDPAVRVLVATDAAGE
GVNLQNANLMVNYDLPWNPNRLEQRFGRIHRIGQTEVCHLWNMVASETRE
GDVFQRLFEKLEIERQALGGRVFDILGEVFEDESLKDLLIEAIRYGADPE
VRARLLRKVEGALDTGHLEDIIKRNALCEEVMDEKRLFAVKEEMEKAEAR
KLQPFFIRSFFTQAFQQLGGALKPRESGRYEITHVPAIIRERDRQITGRD
RRHADPVLRRYERICFEKPFVRLTDRVGAPMASLIHPGHPLMQSVTDLVL
EAHRNKLKQGAVLVDPSDMGLTPRVCFIIDHSVKEGADPVHVVSRRMQFV
SLFPSPPEGGEGQGEGGLKAENAGWAPHLDLEPLGDADRALIEDVLAAPW
IAKDLEQLALAHASTHLVPEHFDEVRARREKMVDKTLAAVHERLVKEINF
WSDRYIKLQDDIAAGKDVRLTLENVRRTIDDLTARRETREKELTAMRHVI
SATPVILGGALVIPAGLLLQRKGQPGWSADAGARSRIERIAMQVVMDAER
ALGHEVIDVSAERCGWDITSLPPARDGRLPPSRHIEVKGRAKGQTTITVT
RNEILYGLNQSDKFILAIVLVDGEQHEGPFYVRQPFTSEPDWAVTSINLD
LDALLARAEFPH
>MCA1991 putative ATP-dependent helicase
MSGVDDVFAEDGPLARFLAGFRPRDAQIGMARAVEQAIRGGRCLIAEAGT
GTGKTFAYLVPALLSGKRVLVSTGTRNLQDQLFQKDLPLLRQALGTPVHT
ALLKGRSNYLCPYRLENVVDFGFRAGFSAEEADQLERIRRWAKTTRSGDV
AEVNDVPEASPLWRSVTSTAENCLGQECPLYEGCPVVQARKAAQEAQITV
INHHLLWADWAVKTDGFGELLPVADVIIVDEAHQFAETATQFLGVSLSSR
QLAELADDTLIERAKDAPDMGGLADAATLLKVELTAMRAALGEEPRRDAW
HAVAGKEEVNAGLGRMEEALLALAAQLKIAAVRGKGLESCWKRCDEFIQR
LEAFLAEDTEESVRWFEIHRRGFSLSRTPLDIAGEFTRFRKARQATWIFT
SATLSVAGRFEHFSRQLGIVDAECRRWESPFDYRRQSLLYLPPPGLPDPG
AGNYTRAVLRAAWPVLKASRGRAFLLFTSHQALTEAASILEGKTEFPLFV
QGSRPKTRLLDDFRASGNGLLLGTASFWEGVDVRGEALSCVVIDKLPFAS
PGDPVVSARLEAIRKRGHSPFGVFQLPAAVIALKQGAGRLIRDVDDRGVL
VLADPRLVSRSYGRVFLDSLPPMRIARDPGAVRAFFADPPAEGSV
>MCA0767 putative competence protein ComE
MKKLFALLLFMLFSLAAWAEPLDINSATAEEIAATMTGVGKAKAEAIVKD
REAHGNFKSVDDLKRVKGIKEGILAKNRDKITVKADTAASPAPAAATPPG
TATPAPAETPAAKPRH
>MCA2165 conserved hypothetical protein
MALARAHPFPSLPAEPPCAASAAKAAPLWLALCFPALALEALGITGPEPV
AITEAGDGRLRVHSASAAAAAQGVAPGMALSEAQALCPGLTAVSRDPEAE
QRVLSHLAERCLRFTPWISLDFPATLQLEVRGSLRLFGGPARLAGAARQV
CAADGHAVQCGLAPTPMAAWLLARAGFPAPVLETEALRSVLGDLSIAALG
IDDKLSGRLARAGLRVLRDLWRMPRDGLARRYGSDLLRRLDEVVGSRPQP
LGRFHAPPRFRAERELAMETEDLTRVFPLVEALLMEFEGFLRSRDAVAAG
LELELRHVRAAPTRVCLRPRRAGRAARQFAALLRERLDRAALPGPVRGVL
LQSADIQPFTLPTADLFTPGAAGGESWDELLDRLQARLGPQALRRPMLRA
DHRPERAEFGNASRSGEAARSPRPLWLLSRPRRLRDRDIRILPECERIET
GWWDGGPVRRDYHLAVDGVGARLWVYRDAGTAGPWHLHGLFG
>MCA2234 hypothetical protein
MPPPSPSHPLGPSIAVCLCSLLWMAPVSAEKPKGDDGVVQTLRKAQGMLR
QLSQDKIELEARNALLEKQLAEQSATIKALEGKAAKLEPLEGELKKISTA
RQALEQQLGGQNSRLHALAEQQKKVLAELQRYRKDNQLLVEAVKERTRWI
EDCTVKNRSLVRANEEILEKLGDSSLLDKLVESEPFTGIAAVEKENAVQD
FHYKIEDLQVTPWKEEPPTGMTGGGSVESPAQEEDDEEGE
>MCA0735 ISMca3, transposase, OrfB
MRIAPSGYWRHAAQQRDPRLLPARAQRDAVLMPEIQRVWHANMQVYGADK
VWRPLNREGIQVARCTVERLMKRLGLAGVRRGKVVRTTVPDHAVPCPLDR
VNWQFKVDRPNQLWVSDFTYVSTWQGWLYVAFVIDVFARRIVGWRVSHSM
RTDFVLDALEQALYARQPERTDALVHHSDRGSQYVSIRYAERLAEAGIEP
SVGSRGDSYDNALAETINGLYKTEPIHRRAPWKSREAVELATLEWVAWFN
NHRLLESIGYVPPVGAEANYYRRLVDRTVETT
>MCA2556 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA2178 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA1344 site-specific recombinase, phage integrase family
MFGQDEVKTVTFATAALRSRRLDRPIGKSGQPSLRNSGFLLGGVIRDYIR
VQHDKVRYERLRQAESHLIRCAEILGDRPIGVYRPEDIRILLNELRSAYG
LSAATANGYLGSLSALFNWAIAERRYGLERNPCNGCRLPNESVVAELRQQ
SADKPFSPEQLKIFFESEHARKGVNTAYKYWIPLIQLYAGARIGEICLLT
PEDIVELPGGIPAFRLVTANARLPVIRKLRFVPLHPRLVALGLLEHARNQ
RGHDTMWPGLKIPRLGSKGQNFGMWLNRHLNALGLKQEGRRSDVFRATFR
AFLRQAGVTESHVDALLGLTGSGAGGRARPLWETHPDVLLRELTKLDYGI
EHTAPPVS
>MCA0654 CRISPR-associated protein, TM1801 family
MNQLPQNRYDFVLLFEVKDGNPNGDPDAGNLPRLDAETGHGLVTDVCLKR
KIRNFVGLTQGDAAPYEIYVKEKAVLNRQHERAYQALGVDLGADEGKRKG
GDKVDDARRWMCQNFFDVRTFGAVMSTGVNCGQVRGPVQLTFARSISPIV
ALEHSITRMAVATEAEAEKQGGDNRTMGRKHTVPYGLYRAHGFVSAHLAQ
QTGFSEKDLELLWQALSQMFDHDHSAARGEMATRGLYVFKHVGTDTDPDQ
RKQQAMLGCAPAHKLFDLIRVEPKDTGRPPREFGDYAVSAPPAGPLPAFP
GVELMILVP
>MCA1956 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA0730 hypothetical protein
MLDVSVLTESARDFLTSKLGVQTQTIEAFVQTVLPTFFDNDGPLDASKYT
PLISELANHPTLVNDDDIRRLLGSLPIVPTQDGGWSRPINTYRRTEDLVK
VLGDALHLWLDASRIPDTRSVHTFIDSLGIRRSPIARHLVDRMLSIAEKY
MPTEDAKRASSEAFYVLCDNYEEWKEKKSFQDAIAGLRQAACFPADGDSE
EWHTTDSLYAPYRADAFRSQANILDFRNTARLKTELLEELGVSINPETQL
VIAHLKHCVTTGVQPHVSTYQVLNERAQRSDPLIAALAGSRCIYVESQKT
FVRPNQLYWVPQQLGRYAYTIPGNYESFKPLFDAIGVKNAPDGRDFVDIL
LDIVGEYFEQSKPLTGPDRAVYDVCLASVATAHEHEELTPSDLQRLQEAP
TILNLRGQLTHPDEVLLQDSEWHAGFFGGELDQALCKPVPELWPFVEEVG
VRRLSESAQVALEFVDGPQADETQLAEKLMDRMDILARLLHDKPTTVRKK
IRGALSTLTAVSHDVVRIQASVHVGGDQAFAPPTPAQAFYDIENGRLILA
RPVGDRSWAHVLNALFHQLMPEESGSEVSKLTLSVRPLMGMAVEEAHREL
SDAGIPFLDAEPGNGNTEDLTSPDLDEMGGTAEPDNHEETGAASTSVNDS
GEQPDGAPATPHGKRQRDTPEPSTGGEAAEQPGREAEYGGPRRGVTGRDG
SETGVGSNKGPGDGERRAKKPRPKHKEQWDRRLLSYVRQRQEESSDAGDQ
EGPSEHNLAVEVVAREAVCAYEKERGRVPEQMAQTHPGYDIISRNPVTGE
DRFIEVKGVNGEWNQTGVGLSRLQFSNAQDYGDRYWLYVVEFVSDPEHIR
VHPIRSPATQVTAFMFDGNWRDAVTEERADPSARFIPGARIQHQDMGCGE
IRDVVTRGNTKLLTILFDGKSQATPNVTLNLHRMRILEDPDDDNDS
>MCA0593 protein phosphatase/kinase family protein
MSVSGQPVLRAAVVTLQGRREDNQDFAAIAEPSPRDAAARGFVAAVADGI
GGARGGRVAAEVSVRSFMEAYYGLSETLGMQQLLDRCLGSANRWVHAMGR
LDPELAHMGTTFSGLIFRGRRAYLVHVGDSRIYRLRGDEPELLTSDHTLS
GPGLDHVLYRAVGLDPGLRIDYSVYPLEPHDRFLLCSDGLHGSLQQEQIR
EILQERATPETTAEALARLAFEQGSQDNITALVVDVIALPPAEKQSLRLA
IESLPLLDLPEVGDEVDGFRLERLLSSGRYSALFLAADTLGQDKPVVVKF
PHPRVASEREYYDAFVREAWIGARVKSPWVGEILEQTPGRQSRLYSVMPF
YPGASLEHELARRPRIGLEAGIDLALKLCKAVHALHRQQIVHRDIKPDNV
LLDPEGGLKLLDLGIARLPAWDEDQADPIPGTPSYMAPEMFQGERGSIAT
DVFALGVTLYRTFAGGAYPYGEVEPFSTPRFGSPRPLTAHRPDLPAWLDA
VLARAIAADPAQRPADAVELAYELEAGLEKGGGRRPPRRPLPLYERNPLQ
FWKAVAALLLALLAMAGLRLSLSCRPPSEAASRNNPLIHDNGDSR
>MCA0184 conserved hypothetical protein TIGR00252
MAVSGSHRPLTGPQAESWTAEYLTARGLRLIERNYRCRLGEIDLVMAEGA
TLVFVEVRYRSGKRYGGALASVDRHKCRRLLATAQHYMVEHRVTGAVRLD
VVAVSPGAAGPQAEWIRNAIEAQ
>MCA1574 ATP-dependent RNA helicase, DEAD/DEAH box family
MLAPTRELALQVAEAFQSYARHLPDFHILPIYGGQSMDAQLRHLRRGVHV
IVGTPGRVIDHLRRKSLNLDGLRTLVLDEADEMLRMGFIEDVEWILEHTP
PERQIALFSATMPEAIRRVAKRHLRHPKEAKIEAKTATVEAITQRYWLGS
GAHKLDALTRILEVEDFDAMIIFVRTKVLTEELAEKLEARGYSAAALNGD
MSQALREKAVDRLKKNTLDILVATDVAARGLDVERISHVVNYDIPYDTES
YVHRIGRTGRAGRKGQAILFVTPREKRMLSAIEKATRQRITEMRLPTHQD
IAERRVEQFKAQIMTTLEEEDLEFFRRLVQQIGREQSLSPTDIAAALTYL
VQKDRPLVPEEQPAPAESPAESREPRKKFRDRDAEAGEKKRKRKDREETG
VLYRIGVGRNDGAAAKDIVGAIANEADIPGRDIGHIKLYDDFSTVSLPAD
LPKKSLKRLEKIWIVGKPIDIRLWTGGTTAPQAVEKPKRKKKGYPKKNG
>MCA3029 hypothetical protein
MASTARGKSERRVPVHPKLIELGLLAYVDGLDGLDTLWPGLIIPRLGSKG
QNMGMWLSRHLERHGLKRSGRRTEAFRATFQHYLRLAGAPELHINALLGH
MERKSAGAAREPLWQTQPETLLNSLARLDYGIKFSAYVGPGPTGLK
>MCA1615 site-specific recombinase, resolvase family
MQIGYARVSTDAQDLTTQRELLAAAGCQRIFAEKITGTRADRPELARMLD
HLRAGDVVTVTSLDRLARSTRDLLDIAERLQAIGAGLRSLSEPWADTTSP
AGKMVLTVFAGIAEFERSLIVERTRRGREAARRRGVQFGRRPALTPAQVS
HARELLAEGRAVPEVAALLNVHRATLYRALERSELRNGSPDLRQPSV
>MCA2687 prophage LambdaMc01, ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA3028 hypothetical protein
MPRASLCRRASRHHATRPLQLRHPSMSRKRSRATMNIEKQSEPQTQKAET
RHVERYGHRRRRHGGAPTMFPMIREYIRDQHGKVRFERLRQAENHLLRFI
EIAGDRPLPEYLSADVTAFAKELSERRRLSASTVNGHLSSLSALFNWALA
QGHPGLMENPCSGCKLPTGTVAAEQRQQPADKPLTLEQLRAFFEGEETAA
DFDTPYNL
>MCA1895 ISMca3, transposase, OrfA
MSKANKYSPEVRERAIRMVQEHRGEYPSLWAAIESIAPKIGCSANTLHTW
VRTHEIDAGLRAGVTTDERERLEALEREVKELRKANEILKLASAFFAQAE
LDRRLES
>MCA1642 transposase, IS3 family, truncation
MKFPPHEVREREHQGRHESRLAAIRSIATKTGRTEKTLRRWIWQSEKDDG
QREGTTFDRSLSDSAIAA
>MCA2900 prophage MuMc02, DNA methyltransferase
MVEFSDGRCRLFQNDFREVASLITPGSVAAVITDPPYGSGGFTVKDRLKS
SKTKYVSSDASYQKTLPDIDGDSLHPEAWKELMKAACAVARSVLMNGGVL
AMFIDWRNKPQLQEIIHGSGLALRGCVAWDKGNGARPMKNGFKNQAEYLL
WATQGPTPTREPPVYLPGVLRHSTLSNGKVHITQKPLALMEDIVQVCPPG
GTVFDMFMGSGTTGVAALKHGRRFIGCESVPEYFDASVRRCREACPEEQT
GRPESPSANPAQSYR
>MCA3008 conserved hypothetical protein
MTTVKAPKKLIEVALPLDAINEASAREKSIRHGHPSTLHLWWARRPLAAA
RAVIFAQMVNDPGYQQGGGFRYGVNKEKAQLERERLFKIIEELVQWENTN
NEAVLSRARAEIWKSWRETCELNKNHPCAAELFNPDKLPAFHDPFAGGGA
IPLEAQRLGLESYASDLNPVAVTINKAMIEIPPRFAGRAPVGPVPPSPDG
RGVGGEGLFAQDWAGAKGLAEDVRRYGAWMRSEAEKRIGHLYPQVEVTRE
LAQGRQDLQPLVGQKLTVIAWLWARTVKSPNPAFSHVEVPLASTFVLSSK
AGKEAYVQPMISPLPLGEGLGVRAGSEGYYRFTVQVAGTPGFDKADYARA
KSGTKLARGANFECLLSNTPIEPNHIYTEANAGRMGARLMAIVAEGARGR
VYLPPLPEHEAIARQAQPEWKPEVAMPDNPRWFSPPLYGLKNYGDLFTPR
QLVALTTFSDLVIDAIERCRRDAAAAGLPDDGVPLDAGGTGATAYAQAVG
VYLAIAISRFSDRNNSICTWDSGPTGTKASTGGSARTASLRNLFARQAIP
MAWDFGEANPFSDSGGGFSSAFEWIEPAVRSLRGGCAGYGDGADAQTQTL
SRDKVVSTDPPYYDNIGYADLSDFFYVWLRRSLKPIFPGLYATLAVPKAE
ELVATPYRHGSKEAAEAFFLDGMRRALKNLAEQAHPAFPVTIYYAFKQSE
TTDAAGTSSTGWETFLQAVLDAGFALTGTWPMRTELGNRMIGAGTNALAS
SIVLVCRQRATDAPTASRREFLRELNATLPEAIADMIGADPSPQPLSPRE
RGYGRVAPVDLSQAIIGPGMAIFSQYAAVLEADGTPMTVKTALALINRFL
AEDDFDHDTQFCLHWFEQQGWASGKYGEADVLARAKGTAVDALVAAGVAE
SAKGSVRLLKWPEYPADWSPESDTRTPIWEALHQLIRALNQAGETEAGRL
LARMPARAEPIRALAYRLYTLCERKGWAEDARAYNELVTAWSGIEQAANE
AGVVGAQMQLEL
>MCA0096 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA1896 ISMca3, transposase, OrfB
MRIAPSGYWRHAAQQRDPRLLPARAQRDAVLMPEIQRVWHANMQVYGADK
VWRPLNREGIQVARCTVERLMKRLGLAGVRRGKVVRTTVPDHAVPCPLDR
VNWQFKVDRPNQLWVSDFTYVSTWQGWLYVAFVIDVFARRIVGWRVSHSM
RTDFVLDALEQALYARQPERTDALVHHSDRGSQYVSIRYAERLAEAGIEP
SVGSRGDSYDNALAETINGLYKTEPIHRRAPWKSREAVELATLEWVAWFN
NHRLLESIGYVPPVGAEANYYRRLVDRTVETT
>MCA0281 ISMca2, transposase, OrfB
MKRRYPVSVSCEVLQVSASGYFNWLRRQEDGQGRSDPTQRHSDEALLAHI
RAIHAEVKGEYGWPRMHKELVARGIRVGKERVRRLMQQHGIHARNKPKFV
VTTDSRHSLPVAPDLVQRRFNPEAPHRLWSGDITYIATDEGWLYLAAVID
LFGRQVVGWSLQERMHTALVKDALAMAWWRRRPPPGLIFHSDRGSQYGSH
EFQQALRDWGMRSSMSRKGNCWDNAPTESFWGRLKTASVHGHQFATREQA
RQAVLDWVAFYNHRRLHSSLGYLSPMQFEQRWYEAQRKNAA
>MCA0050 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA1620 ISMca4, transposase, OrfAB
MKKSKFSDSQIIEALKRVEAGLSVPKLCRELGISTAAFCKWRAKHGGLAV
SMMARMKELEAENARLNEDARGGAPEGRHSSGGDFKKVVRPSHLRATARR
AVSGHRVSIRLGCAAFQVSGTCYRHSAKRNAGNEEIADWLMRLTDNHRNW
GFGLCFLYLRNVKGFGWNHKRVCRICRELELNLRIKPRKRLKRDKPEPLT
APTRINQVWSMDFMHDQRADGRKFRLFNVIDDFNRASLGMEVDFSPPSER
VTRALEQVMEWRGRPRVIRCDNGPENISAKVQARAARQGIRIECIQPGNP
QQNAHVERFNRTVRHEWLSQYDWESLDEVQAFATRWMWTYNHERPNMALG
GITPKQRLARAA
>MCA2212 conserved hypothetical protein
MDDGWFPEEPPTLATTVSVETSRSVVTRNQSPDIPFDQSLNPYRGCEHGC
IYCYARPSHAYVGLSPGLDFETRLFAKPDAPALLEKELARPGYRCSPLAL
GANTDPYQPIEREWRITRQVLEVLQRARHPVTITTKSALIERDLDILSEM
AAAGLANVQVSITTLDKTLALKLEPRASAPHRRLLAVARLAAAGVPVKVM
IAPIIPWLTDSEMERIVEKAAEHAAVSAGYILLRLPREVESLFAEWLTAH
YPLKAAHTLSLVTLAHGGRIYDPGFGRRQVGSGDYAALLARRFRLALKRH
DLTEEPPGLVSDLFTPPGQRQLALF
>MCA2841 putative DNA processing protein DprA
MTEEALRCWLALVRLPGVGPRRAVSLLERFGSVCAVFAQPRDSYGGLRLS
GEALDRLMRPRWEEVEADLAWLSQPGHGCLTLHDREYPALLREIADPPVL
LFTRGDATVLRRKQIAIVGSRNPTAMGERTARRFAAALSRAGLVVTSGLA
AGIDAAGHEGALEAGSATVAVFGCGPDRVYPSRHQRLADAIVGSGGVLVS
EAPPGTPPSREGFPRRNRIISGLSLGVLVVEAALQSGSLITARQAMEQGR
EVFAIPGSIFDPLARGCNALIREGAKLVESVPDILEELGALAGFVDRQER
LPVVPPADAEAARILAHIAYAPTSVDTLVAATGYTANLIASKLVLLEMEG
HVAAAPGGGYCRIK
>MCA0031 ISMca6, transposase, OrfA
MSALKQSLLAIPDHRRAQGRLFDLPHMLLFSILAIMSGATSYRRIHQFLH
THQAALNAAFGCRWRRTPAYSSIRYALQGLDVQALAPHFRAHAARLAEGA
AVIALDGKTLRGSLDRFEDRKAAQVLSAFATEERIVLGQILIEDAGKDHE
IQAAQRLIETLGLSGRLYTLDALHLQKNG
>MCA1477 conserved hypothetical protein TIGR00052
MTREFEVLREERLHGGFFTLLRLRLRHTLHGGGWSEIVTRELYHRSSCVA
VIPYDPVADRVVLIEQFRVGPLKSGENPWLLEIVAGAVEPGEHTDEVAHR
ETLEEAGAQIRELIPVSEFFTTPGGCSESITLYCGIVDSSCLGGIHGLAE
EHEDILVSVVDFAAAMTLLAEGRIRSAIPIIGLQWLALNRERLRMQYGVA
>MCA2276 phage SPO1 DNA polymerase-related protein
MCDDTDLKERRRIQYLDAMGIPVWKLRSQPVPAAEPAADAFPSPPGRREC
EGPDEENWDRLAAEVAACTRCELHLTRTQTVFGVGNRRATWMVIGEAPGE
QEDLQGEPFVGRAGQLLNEMLRAIGLKREEVYIANILKCRPPRNRDPKPE
EAAACESYLKRQIALIRPRIILAAGRIAAQNLLKSTETIGKLRGRVHRYE
NIPLVITYHPAYLLRAPLEKRKAWQDLLLAVETLNRSPVTPSS
>MCA2682 prophage LambdaMc01, helicase, SNF2 family
MEAATSFQPGERITHHEFGQGVVLDPARDGYLRAFFSVGERRVPVGSVRR
ELTRTERILRAVDGGADRARRAWLSYEAHALPVMESASALTSAKIDLLPH
QVVLTHRVATASPRRYLIADEVGLGKTIETALILRELASRGELNRALMVV
PAGLVNNWHRELNEVFNLDFEVFGSEGDITDRKTNAFAKHDRLIASIDTL
KRPARIKRLLDAPRWDLVVFDEAHHLTACRNGGKVRKTENYKLAEALKDH
ARDFLLLSATPHQGNHFQFWMLVQLLNPTLFRSPEEMLENRHRLNTVMFR
RTKADACQPDGSPLFARRWVHTESFVMNTGERLFYERLREYLEDGFDLAR
RQGSQGRALGFLMAIFQKIAASSFAAVRRTLKRRLLMLTIHEALLRDKEL
DIEGRERLMDEARDLIHQEFQLPRDSIGRSEVDRVLADLKYRLVKRLDEE
ALDLASDPYGSEYSATHAEDVASAVVEMHLPEERLRIGDLLKIFPVQRET
KAQKLLDGLGYLWRQNPNEKVVVFATYLGTVDLIAREIEQAYPGQGVVVL
RGGDHGAKVAAERRFRQKDGPRVLVCTAAGREGINLQFARILFNFDLPWN
PMDVEQRIGRIHRYGQNHTAQVYNLVLSDTIEGRIFLLLDEKLTEIARTV
GKVDDQGNVAEDLRAQILGQLSERLNYDRLYQEALSDPELKRTRVELEAA
LSNSREARQVVFDLFQDLEGFSLDDYKPFSDVSSSLDRLVRFLSAAAAER
QQRLIKVDDETYDLVTVDGVRRARFTLNRDTATGQDDVELLGLDHPLVQE
ELGRWRIVRPEDVGIAVTGDVDGPVLLSLWMVETSAGNGERRIVVQPIAV
KQDGTRVPAVERQAERYLQAPATSPRFTPEQRLDLFARAVEPTLQRELKH
KGAVKGDGSYSAELIGYVEIVEQGA
>MCA0227 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA0676 site-specific recombinase, phage integrase family
MALTDTAVRSARPAEKAFKLADEKGLFLHVMPGGARYWRLKYRIGGKEKL
MALGVYPEVSLKEARARRDKARALLGQGIDPNDHKKAAKRTEAGEDSFER
IALEWHARHMANKSESHATKTLERLRKDVFPWIGNRPVREITAPELLSVL
RRIESRGAIELCHVTKRICGQVMRYAIATGRAERDPAADLKGALQPVKAR
HFAAITDPKAIGELLRAIEEYTGHFATQCALKLSPLVMLRPGEVRQAEWA
EIDIEAAEWRIPAAKMKMRDEHIVPLSRQAVEILESIRPLTGRGRYASPG
FPT
>MCA1011 ATP-dependent RNA helicase, DEAD/DEAH box family
MSSDSNSAGPAFADLGLAQPLLRAVSEAGYVHPTPIQAQAIPLLLAGGDL
LAAAQTGTGKTAGFTLPILHRLLEKQAPRRPRRPRCLILAPTRELAAQVL
ESVEGYGKYVPLKATVMFGGVGLNPQVRALAAGVDILVATPGRLLDHCGQ
NTVDLSAVEIFVLDEADRMLDMGFIRDIRRILGLLPKQRQNMLFSATFSD
EIRTLADGLLNNPGYVEVARRNAASDLVDQTVHLVAQEHKRDLLTHLIRR
HDWRQVLVFTRTKHGANRLAEKLAEDGIPAAAIHGNKSQSARTRALADFK
DGTVPVLVATDIAARGLDIDQLPHVVNFELPNVPEDYVHRIGRTGRAGRA
GSAVSLVAKEELKLLGSIERLIKRPIQRGTVEGFNPPSRPRIERRDDRSR
RPQEVRDGGGRQSPPGQPKARAGLGSRSAARHAQKPQQRQAGNRLRSQGG
KRG
>MCA1219 ISMca5, transposase
MPSKKKPAAAGMTALPSIPHELIEQLTGGATPMTAEQINATTMALKKALI
ERALGAELSYHLGYPPGSARPEDAANQRNGKSAKTVLTQDGPLRIEVPRD
RAGSFEPILIPKHERRFTGFDDKIVAMYARGMTVREIQGFLAEQYGTEVS
PEFISCVTDEVMAEVTAWQGRPLEPMYPVVFFDCLRVKIREDAVVRNKAI
YLALGVLPDGTRDILGLWIENTEGAKFWMKVFNDLKTRGVADILIAVTDG
LKGIPEALGAVFPATTLQTCIVHLIRNSLDYASWKDRKALAAALKPIYTA
PSAEAAAVELDALEAGPWGQKFPTVVATWRRAWDRVIPFFAFSPAVRRVI
YTTNAIESLHSQLRKIIKTRGHFPNDEAATKLLWLALRNITADWGRAARE
WKDAMNQFAIA
>MCA1616 C-5 cytosine-specific DNA methylase family protein
MAIEHHITLETRADTLAYASIKAASSLTISKAKASAKKATAFSVISLFSG
CGGMDLGFRGGFEFLGKRYAKLPFNVIWANEINEAACQTYRRNLGSHIHH
GDIWQMMDSLPPEADVVIGGFPCQDISVNGKGAGINGQRSGLYRAMVEVV
RRVRPKVFVAENVKGLLMRHHADALKTVLDDFSALGYSVTHQLYLAADYG
VPQTRERVLIVGTLPGVKPFEPPKPIISPSRYITAKQAIDDLAALDEDEE
INHVWSRAGKSPEQGNRRLIADRPGYTIRAECHGNIQWHYELPRRISMRE
AARIQSFPDEFIFASKLRETERQIGNAVPPVLAWHIAKAVAQCLK
>MCA1977 site-specific recombinase, phage integrase family, truncation
MDMIERQLGRAEGNEVKAACNHAEHLPERRKIAPSPDFEPPSERTKRPTT
>MCA1618 putative DNA mismatch endonuclease Vsr
MRAIQPHGTKPELVVRRALRQLGYPGYRLHPKGYPGRPDIAFIGRKKAIF
VHGCFWHRHDCRLGRRLPKSNLSYWLPKLERNMERDKEALARLAAAGWDV
LVIWECETKDAEALARTLTGFLGTPRTP
>MCA0887 ISMca7, transposase
MKQTTFASLAFDRKKKQTRREKFLAEMERAVPWPELLAVIEPHYPKAGRR
GRQPYPLATMLRLYFLQHWYALSDPGLEDALYEIESMRRFAGLELADDAL
PDETTILNFRRLLERHALTAKLMNTINDVLEARGLLLKGGTMVDATIIHA
APSTKNKAKTRDPEMHQTKKGNPWFFGMKVHVGADVHTGVAHTVSVTPAH
ASDISQLPNLLREDDRLILGDAGYVNDTYKRAARQAGVVWGVALKARPKR
RLGSAQKRRNRKLSSLRSRVEHLFRVMKRQFGYTKTRYRGLAKNAAQVFT
LIGLTHLYLKRYALMT
>MCA0474 ATP-dependent DNA helicase, UvrD/REP family
MPPWVRHQFPEASVLIRRLRDTPCSDPACPWCSERHNARKELQRWFGLPD
FRPEPRGEDGRSLQQSIVEAAMRGEHVLGILPTGTGKSLCYQIPALSRYE
KTGALTVVISPLVALMADQINGLANRGIHCCAAINGLLSMPERSDALDRV
RLGDIGILVISPEQLRNRAVRKVLAQREIGAWVLDEAHCLSKWGHDFRPD
YRYVGRFIRDSAGDATIPPVLCLTATAKPDVVADIVGHFSARLGIGLRVF
DGGSQRSNLDFVVVQTTPAEKFADIHRILMSDLPPDVPGGAIVYCATRRK
TEEVAAFLRATGIAAAHFHAHLPPETKKNVQENFIRGELRVIAATNAFGM
GIDKPDVRVVIHADIPGSLENYLQEAGRAGRDREAARCVLLYTQEDVERQ
FGMSAHSRLSLKEIRAVLKALRRLDRRKRLDGEVVATPGEILAEESEGDF
GRDLATDDTRVRTAVAWLEEAVLLSREENRCQVFPSSLRVGSVDEARRKL
AKQPMHEEYRRQLLDLIAALIGADPDEGVSTDELMGLLGLNPERIRNALY
DLERLGLASNDTVLTAFVHSGVERASMKRFEEAVALETALIAELRLAAPD
LDKDESSMLHLRIAAQRLKDAGHPGALPEKLQRLLSGLAADGRAEDSGTG
SLRLRRIDSESVNVTLQRRWSALEKTARLRRIAAQRLLEHLLACLPSGTR
GTDLLAETTLGKLTAAMEGDLMLKAEMKNPPKLLQTALLWLHDQDVIRLN
KGFTVFRAAMTIRLAPDKRGFAKADFEPLKLHYDEQVLQIHVMAEYAQRG
LKAVAEALRMAMDYFRLDRDAFLRQWLPGREKELSRQTTPESWRNIVESL
QNPAQQRIVADDREQTNVLVLAGPGSGKTRVLVHRIAYLIRVRRENPRGI
LALAYNRHAAAEIRKRLAGLIGDDARGITVLTCHALAMRLAGVSFAERWE
KTGDEVFQEVLRQAIALLKGEGLPPEEADEQRDRLLAGYRWILVDEYQDI
GPDQYELISALAGRTLQDEDSRLNLLAVGDDDQNIYAFNGASVEFIRRFE
ADYAAKPAYLTENYRSTSRIIEAANRLIGDAPDRMKQAHPITIDRARKKA
APGGDWEAIDPVGQGRVQILPAGVDERTQAVTVMREFERLASLAPNWDWT
RCAVIARKWDLLEPVRSYCELAKIPVQMAGEETVPFRYLRETRTLLAWLK
DTKLVDAAKILSWLDERPAGPWWNALRQAAEEYAVETGGAELPSAHFEEW
LAEWGREIRRRPSGLMLLSAHRAKGLEFDHVAVLDGGWKAGAKEDRHSPR
RLYYVAMTRARKTLTLTRIEPNSPLLDSLAGIPDVLHRPPTEHMQLPPEL
SRRYRKLTLKDVHLGFAGRYPETDPIHQAIAALEAGDPLWLKRKNDVWEL
NDAGGNTVGRLARAFDPPKGMICIQARAAAIIIRRRDETEADYLSGVCCD
AWEVVIPELVFEPAGKGRT
>MCA1709 transposase, IS3 family, OrfB, truncation
MRRCLITFIDPASALTAPLGPLPARPGTPLGRRPEFGAGLAQTLEAHGIG
RRYSYPKPPKITAHVERFNRTLQESSVDYHEDPLFTGFGLFNQKLADWLV
FDSTKRLHHRLGQQPPLRFLLPHHPECQR
>MCA1109 2OG-Fe(II) oxygenase family domain protein
MCWYGDPGATYRYSGVSHQPSPWHEVLADLRTRIEAFSGHVFNAVLCNRY
RSGRDSMGWHADDEPELGERPFIASLSLGAERLFRIRHRGTGRTLDVPLR
DGDLLLMGGELQSHWRHCVPRTARPCGERINLTFRRVVPRS
>MCA2899 endonuclease III
MNANKRRRIFERLAAAIPEPTTELRYGTPFELLIAVVLSAQATDKSVNKA
TAKLFPVANTPEAILALREEGLREYIKTIGLFNSKAKNIIRLCELLIERH
RGEVPRDRDALEALPGVGRKTANVILNTAFGQPAIAVDTHIFRVANRTGL
APGKTVLAVEKALEKHTPREFRQDAHHLLILHGRYTCIARKPKCSQCPIA
DLCEYPDKTAAPG
>MCA1312 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA1090 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA0027 ISMca5, transposase
MPSKKKPAAAGMTALPSIPHELIEQLTGGATPMTAEQINATTMALKKALI
ERALGAELSYHLGYPPGSARPEDAANQRNGKSAKTVLTQDGPLRIEVPRD
RAGSFEPILIPKHERRFTGFDDKIVAMYARGMTVREIQGFLAEQYGTEVS
PEFISCVTDEVMAEVTAWQGRPLEPMYPVVFFDCLRVKIREDAVVRNKAI
YLALGVLPDGTRDILGLWIENTEGAKFWMKVFNDLKTRGVADILIAVTDG
LKGIPEALGAVFPATTLQTCIVHLIRNSLDYASWKDRKALAAALKPIYTA
PSAEAAAVELDALEAGPWGQKFPTVVATWRRAWDRVIPFFAFSPAVRRVI
YTTNAIESLHSQLRKIIKTRGHFPNDEAATKLLWLALRNITADWGRAARE
WKDAMNQFAIA
>MCA0837 conserved hypothetical protein
MKYETYGQPAGRPNRRSIRLKGYDYAQAGAYFVTICAHDRECLFGKVVDG
TMRLNELGEIVRNAWLQSAEIRHEIVLHADEMVVMPNHIHGIVWIVDDPV
GATGRSPLPSNGRSPLPPTGSVPLPSNGPTPRSLASFVAGFKSAATKRIN
ERRGTPGAPVWQRNYYEHIIRSDALLARIREYIVNNPLQWALDRENPANH
SGQGGI
>MCA1755 hypothetical protein
MKQKVLEHMKQTNLERLKGWPGIIFYCPVEEAENPAVKAICTAVNADVGN
LMAEHKVPFQIAKSSFDRHFLPHMSGRLLLVVDLAATPAGEQPAAISAEV
QGLAHYAHAVNWSSELYPESGGKEKSPLEVPQHVDALLWESNFIFATAGD
QSTLVERSKAAIEERVRNFLAEFDRINHKR
>MCA1714 surface protein-related protein
MSKAHVLLALLAGLVAGCQLWRPAKPPEQPVAPAPRDYAATDLDALVRYG
EDLARMAPAERLPECQQVDRMQASSPRMGYRLHLLLAQMVTTGCGDASVT
LGNIKVVISEIEDLRVRAWLAYLSELVSRSQREAAEKAELDRQLKEAQSG
KHKVRKDVRAKDSKIQSLESEVEQLRNKLNTLKSIEQKL
>MCA2689 prophage LambdaMc01, ISMca4, transposase, OrfAB
MKKSKFSDSQIIEALKRVEAGLSVPKLCRELGISTAAFYKWRAKHGGLAV
SMMARMKELEAENARLNEDARGGAPEGRHSSGGDFKKVVRPSHLRATARR
AVSGHRVSIRLGCAAFQVSGTCYRHSAKRNAGNEEIADWLMRLTDNHRNW
GFGLCFLYLRNVKGFGWNHKRVCRICRELELNLRIKPRKRLKRDKPEPLT
APTRINQVWSMDFMHDQRADGRKFRLFNVIDDFNRASLGMEVDFSPPSER
VTRALEQVMEWRGRPRVIRCDNGPENISAKVQARAARQGIRIECIQPGNP
QQNAHVERFNRTVRHEWLSQYDWESLDEVQAFATRWMWTYNHERPNMALG
GITPKQRLARAA
>MCA1482 ATP-dependent helicase HrpA
MLDRIVRLERSLDQCFGKDRFALRRRLQRLKASAGKSPPPEEALEAIARR
IESSMALCSARMAAVPPLEYPEELPVSERRGEIAEAIRQNQVVIVCGETG
SGKTTQLPKICLEAGRGIQGYIGHTQPRRIAARSVAARIADELKRPLGET
VGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLDQYDTLIVDEAHERS
LNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNAPIVRVPGRT
YPVEIRYRPPDSAEEESDETERGEQQAILDAVDELHRENTGDILIFLSGE
REIRDTAESLRKHHPADCEVLPLYSRLTVSEQEKIFKPHGRRRIVLATNV
AETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRC
GRVGPGVCIRLYSEQDFLNRPEFTDPEILRTNLAAVILQMKALNLGDIRV
FPFVEPPDERLVRDGLRTLQEINALDAQGRLTELGRRLARLPVDPRLGRI
LLAGAEENCLSEVCIIVAALSVPDPRERPADKAQAADQKHARFRHPDSDF
MAILALWNDYEEQRQHLSGSKLRQYCRDNFLSALRMREWRDIHQQILEVV
KGELGLRPNQVPADYGEIHRALLTGLLCHVGFRQDQNEYVGVRGQKFQIF
PGSFLFKTRPVWIISAEQVETSRVYARTVARIEPEWIEKCGAHLLKRHYY
EPHWERKAARGAVFERTALYGLTVQNGRKVPYENVDPAGARELFIRSALV
RMDYDSKAPFLLANSRLLEEAEYSQQKERRLDLVVDEETLYRFFDERVPA
EVVNGASFEVWRKAAERREPRLLMLSREDITLDSGGGGTAGDFPDELALG
PVRLKLEYRFEPGHEDDGVTAIVPLHVLNQIDPEPLSWLVPGLYREKVVA
LIKSLPKTWRIHFVPAPDFADRALPMMDYRHGSLTAELAKALKKIGRVAP
PVSAFDEAALPAHLRMNHALVDENNVVIARSRDLCQLQARYGAEAGRNFQ
NIARQEIAVSGRRVWDFDDLPTTYSGRVDGQDLHGFPAIVDEGETVGVRV
FDRADEARLQHEFGLIRLLRLTLAREIKYLRKNLPVTPASELLYRQLSPA
GRDLREDLLDRVMAALFIDDRPELRSREVFHSRVELLRGELVAKANELGK
VVEQTLALYGECRGCSKTLRAGPAAEDSGEQLARLIHGGFVATTPYERLR
HYPRYLKALLHRLDKGHQDPARDARLQAEIMAFWRPYWESVEKGGTSLPP
ERDEFRWALEEFRVSLFAQQMKTAHPVSAKRLRELWSQRLSSRH
>MCA2511 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA0980 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA1786 MutT/nudix family protein
MQKLETPSDGRPRVTVAAVIERDGRFLCVEERAGVSSELVINQPAGHVEA
AESVVDAAVRETLEETGWRLVPEAVTGIYLWRHLESGRSFLRIAISGRAE
APEGEVKLDEGIERALWLSRDELLRERSRHRSPLVLRTVEDYLRGERHPL
SLLKPVLG
>MCA0282 ISMca2, transposase, OrfA
MLKMSTRTEAMSDKQVRAQYTREFKLEAVRQVRAGQAIAGVAKVLGIPKA
SLGNGVRLAAKGALGGSGGSDKADRVSPEQMEIARLRAEVARLRMERDIA
KKAAAYFAQDTLRGTPGLTQ
>MCA0333 MutT/nudix family protein
MAEPNPWRLLSRREIYDNPWIHVDEDRVVNPGGGISLYGRIHFKNRAIGI
IPLDGRGNTWLIGQYRYVPDAWSWEIPMGGSPEGEPILESARRELKEETG
LSAASWTLLMRLHTSNSVTDEEGFVFVAEDLEEGEPEFEETEDLRIWKLP
LADAVAMVISGEITDAISVAGLLRLALERASNQVGSGFK
>MCA2964 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA0854 recombination-associated protein RdgC
MWFKNLVLYRFTEACTLTAERLEYALVARRFAPCGSMELAAAGWHPPLRR
DDLPLVHAANGYLMVSLLKEEKILPASVVNEALEERAEEIEARRGTPVGR
KERRDLRDEVFNSLLPRAFSHTRRTYAYVDPRGGWLVVDSASVKKAEELV
SLLRQTLGSLPVAPVATQGRPPAVMTTWLLEQDLPPDLVIEDECELRSPE
EEGGIVRCRRQDLSAPEIRNHIDAGKEVVRLAVSWNDRLSFTLDDALGIK
KLRFLDVIQEQAAEIDAADEVERFDADFAIMTLELSQFLARLVELFGGEA
VQRTVMADNK
>MCA0907 ISMca2, transposase, OrfB
MKRRYPVSVSCEVLQVSASGYFNWLRRQEDGQGRSDPTQRHSDEALLAHI
RAIHAEVKGEYGWPRMHKELVARGIRVGKERVRRLMQQHGIHARNKPKFV
VTTDSRHSLPVAPDLVQRRFNPEAPHRLWSGDITYIATDEGWLYLAAVID
LFGRQVVGWSLQERMHTALVKDALAMAWWRRRPPPGLIFHSDRGSQYGSH
EFQQALRDWGMRSSMSRKGNCWDNAPTESFWGRLKTASVHGHQFATREQA
RQAVLDWVAFYNHRRLHSSLGYLSPMQFEQRWYEAQRKNAA
>MCA2335 conserved hypothetical protein TIGR00250
MAEVPADSRGATYLGFDFGERNIGVAVGQSVTGTAAPLRTLRAQPSARLW
AAISELIDQWLPAGLVVGLSHQQDGSENPITAPTLRFCRQLEGRYRLPVY
TVDETLTTAESRTHFYQRRRRKSVEFEQVKDEMAAQLILQTWFSIDKASP
R
>MCA1611 ISMca6, transposase, OrfA
MSALKQSLLAIPDHRRAQGRLFDLPHMLLFSILAIMSGATSYRRIHQFLH
THQAALNAAFGCRWRRTPAYSSIRYALQGLDVQALAPHFRAHAARLAEGA
AVIALDGKTLRGSLDRFEDRKAAQVLSAFATEERIVLGQILIEDAGKDHE
IQAAQRLIETLGLSGRLYTLDALHLQKNG
>MCA1341 conserved domain protein
MENGGHEEEQVIGFSKQAEGGMPITEMCRQAGRRFHYQ
>MCA2942 putative prophage MuMc02, nuclease
MENPMRRTFIWAVLMGVTVAAHADDWSGKVVGVTDGDTLTIMKGGRGAKV
RLAEIDAPESHQDYGAKSKQSLSDLCFGKEAKVNDQGADKYGRRLGRVSC
AGIDVNLEQLKRGLAWFYVEYGHDPALRAAEEQSRASRIGLWSDANPTPP
WDFRHGTPKKAARSTDEADGSASDCGGKSTCKQMTSCAEARHYLNDCGVS
RLDRDRDGIPCESICR
>MCA2634 prophage LambdaMc01, site-specific recombinase, resolvase family
MTEIASTKARKRCAVYCRVSSDERLDQEFNSIDAQKEAGHAFIASQRSEG
WISVADDYDDPGFSGGNTERPALKRLMVDIQRGLIDIVVVYKIDRLTRSL
PDFSKMVEVFERHGVSFVSVTQQFNTTTSMGRLTLNILLSFAQFEREVTG
ERIRDKIAAAKKKGLWMGGVPTIGYDVVNRQLVVNQAEAAVVRRIFEEML
TIGSPTQIAARLTAEGITTKAWTTQDGRVRTGTRIDKKYIHKVLRNRIYL
GELSNRGQWYPGVHEPIIERELWDQVHAVLARDSHARSVDTKIRSRNDAL
LRGLLYAPSGERMYPTYSRKNGRKYRYYVSKSESRFGAPGKSYERLPAGE
IEAAVVAQIRTVLTSPESVAAVVRHVQRQGALIDEATVVMAMGRLNDVWD
QLFPVEQHRIVNLMIERIDLVHTDEMQGIRVKWRELGWDALIGEFAPRSI
GAELLEVEA
>MCA1782 ATPase, AAA family
MSADFSQPLADRLRPRTLDEYIGQLHLIEPGRPLYESIRRGRLHSMIFWG
PPGTGKTTLARLVARHADAEFLPVSAVLSGVKEIREALARAVQFKAAGRR
AILFVDEVHRFNKSQQDAFLAHVEDGTVSFIGATTENPSFEVNSALLSRA
RVYVLKALTEADLLGVIDRALSDAERGLGGRGLNMSDPVRMAYVRAADGD
ARRLLNLLEITADLLDAGQTVVSEEVARQVLASGTTRRFDKQGEEFYNQI
SALHKSVRGSSPDAALYWLCRMLDGGCDPLYLARRLVRIASEDIGNADPK
ALELCLNAWNAQERLGSPEGELALAQAVVYLAVAPKSNAVYEAYKAARAD
AARSGSLPVPLHLRNAPTGLMKGLDYGKGYRYAHDYPDAYVPGENYFPEG
LERREYYRPVNRGMEIKIAEKLERLKALDKEADER
>MCA2739 hypothetical protein
MAASAHPPACVGTVSPVRVTALALCVWLALAGAVPAATYKWVDEAGRVHY
SDRIPPEQSRQKRSLLDSQGRQVEVIEGAKSPAALERERALRHFREETAR
LIEEQRNLDGALLRTYASEEDMRLVLNDQILQSDASIHILEKYRSRHMDI
LRTQEKRAADMERQGQAVTPQLLKAIEDERRRIADYEEKIRILEDKKRSI
ADRFDRDIQRFRSLKAERARTGQGALGEVFAGDDDGVLSAVVCSSAAVCA
KTWALARAYAIGRADTPVAIDTDRLVYTSVPLSDQEIALTLARITGPDEE
TIFLDVRCRRSSLGLELCASSRVRDIRAGFRAHVESGMGAGP
>MCA1517 ISMca1, transposase
MRGTQNFQGAMFSYISLEERVPARHPLRKLRALVDALLASMSAEFEAVYA
RRGRPSVPPEMLLKALLLQILFSIRSERLLVEAIDYNLLYRWFVGLNLED
KVWDHSTFSANRQRLFNEDLARVFFERVKYTADWAKLIGDEHFSVDGTLI
EAWASQKSFKRKDASGSDDGAPPQGRNPEVDFKGETRRNDTHASTTDADA
RLFKKAAGDKSRLCHMGHILMDNRHGLVVDVEITHASGTAERQAALKMLQ
RQKRKAGRLTVGADKGYDCRAFVQGCRKLGITPHVAAKAKHSAIDGRTQR
HEGYKVSLRVRKRIEEAFGWIKTVGGLAKTKLIGHAKLAGQALMCFAAYN
LVRMGSLGGWWDAHHA
>MCA0729 conserved domain protein
MTTMIPELSEAQLNELPSQAEAKVYRALRDKLPQDYVVFFQVGWILRREE
EQAKDGETDFLVCHPDHGYLCIEVKGGGVGFDASTGDWFSVDRHQQKHPI
NNPISQALKAKYSIRSKLNEHPRWRDLGLGNVLRGHTVFFPDVGDTNVLS
RPDMPGALIGSTRSLQDPKSWIDGVFDYRGNDAGSFTPIGRRGIDVVREV
FARSFVVAPLVASRLADQEARRLVLTKDQMRVLDFLRSHRRAAVSGGAGT
GKTVLALEKARRLASEGFKTLLTCYNRQLADHLSSTCAGTSNLDVMSFHQ
LCYRQVEKANHVSGRDLVAEAKVTYPGKDLYDVQLPNAFAYSLEVLPDRY
DAIVCDEGQDFREEFWVPLELLLSDYESAPLYVFYDDNQNIYARAGTFPI
REEPFTLTNNCRNTAPIHVAAYKHYKGVPVSPPDIEGDEVQFEASPRRDA
QAAKINARIVDFVARQGVSAGDITVLIADALRKADYYAALRRLPLPKPAT
WLEEGIRANNTVLIDTIQRFKGLESPIVILWGLDTIDLTRSEELLYVGMS
RAKSLLIVVGTAATCAAFRGEPEN
>MCA1610 ISMca6, transposase, OrfB
MPSTFKKTVETVLATGNDLPVQLKGNHPKLLAAVRTLCQSRAHAEQSYTV
DLGRRNRIEQRTVRLWPLPSGSGTDPWHDHFQTVIEGQRQIEVFNPYHRR
FEPRQESPAYYLATCTASAATLAQVIRGHWAIENRLHHVLDVSLGEDSSR
IRRNPGVFALLRHFALNLLRHNGQANIRSALYDNAICLHRLLAYDGI
>MCA2166 conserved hypothetical protein
MAGKTETLTGLLDRDPRIWRGRRPGTWRAPVIPSGHAALDAVLPAGGWPA
GALTEIITPAQGIGELRLLLPLMRRIAGDGRRLVWVAPPFEPYAPALVQA
GVEIGRMLVVAVADRRRDLGWTLELLLRHPETGLVLAWPWTLPPSVWRRL
QLAAAESGALGMLFTDGAAGGTTAALRLSLGVCEGGLELRILKARGGFCG
ARVPLML
>MCA2098 putative DNA polymerase III, chi subunit
MTRVDFYLLPAGESLLSYACRLTEKAYRQGHTVFLVTDTDDEAAQLDDML
WTFRQGSFVPHRAVTGHTAAGPCPVAVGREPPVGFDDVMINLGSAVPEAF
RRFRRVIELVGPDDAARALKREHFRHYRSEGLNPAMVDLEAEACPSRRVG
YH
>MCA0065 putative methyltransferase
MRNELRIIGGLWRSRRIRFAPEPGLRPTPDRVRETVFNWLQQHIGGAVCL
DLYAGSGALGFEAASRGAARVIQVERNPRVCRVLKQSCAMLNAGQITVVC
AETMKFLSGRPEVFDLVFLDPPFRTGQVGPCCRKLEQGGWLKPGARIYVE
AEAGPAPDGIPANWTLLREKASGDVAYRLYQRLEESPV
>MCA0045 endonuclease V
MGLALQHSHRWDLSPREAANLQTRLRPLVLAEDALPDEIRTVAGVDVGFE
DHGRITRAAVAVLDFPSLRPSDQAIVRRPTRFPYVPGLLSFRELPALLEA
LERLNLLPGLILVDGHGYAHPRRFGIACHLGVLTGIPTIGVGKTRLVGTH
GELAEDRGSWIPLIDGDETVGAVVRTRRGVQPVYVSVGHRLSLPTAVDWV
LRCTPRYRLPETTRQAHRLASA
>MCA2655 prophage LambdaMc01, DNA methyltransferase
MTNSWFADKIEQWPTAKLVPYARNARTHSDEQIAQIAASIAEFGFTNPIL
AGSDGVIVAGHGRLAAAQKLGLDIVPVVVLDHLTPTQRRALVIADNRIAE
NAGWDDALLRVELKALQDEGFDLDLTGFDAGALADLLAGDEPANEGQTDD
DVVPEVSETPVSRPGDVWLLGPHRLLCGDATVADSYARLLAGDPVDMVFT
DPPYNVNYANSAKDKMRGKDRAILNDNLGDGFHDFLLAALTPTVANCRGA
IYVAMSSSELDTLQAAFRAAGGHWSTFIIWAKNTFTLGRADYQRQYEPIL
YGWPEGAQRHWCGDRDQGDVWQIKKPQRNDLHPTMKPVELVERAIRNSSR
PGAVVLDPFGGSGTTLIAAEKAGRVARLIELDPKYVDVIVRRWQDWTGKQ
ATREADGLAFDQAATSSATIL
>MCA0652 cas4, CRISPR-associated protein Cas4
MDETFPIPLSALQHYSYCPRQCALIHQEQMFTDNVFTLRGRRVHERVDEP
DTRHEPDVRIEQALTLFSDRLGLTGKADIVEFLPDGTPRPVEYKHGPRRQ
REHDDVQVAAQALCLEEMTGKEVPEGVIYHHSSRRRRVVPITPELRIKTE
RLIHEVRALLASGKLPPPASEPERCRGCSMIEICQPEMLKSAAEIDRLAQ
TLFEPEEDLP
>MCA3033 dnaA, chromosomal replication initiator protein DnaA
MSVLWSHCISKLEGELPPQQFNTWIRPLQAVEDGGELRLLAPNRFVLDWV
KQHFIGKIEEVVSEQNRDSAPNVVLEIGSRAAEAAQMRSANPPRKTAPAR
KQVPNNLNSAFIFGNFVEGKSNQLAKAASLQVAQNVGRAYNPLFIYGGVG
LGKTHLMHAIGNEILRGNPAANIVYLHSERFVSDMVKALQHNAINAFKEF
YRTVDALLIDDIQFFAGKERSQEEFFHTFNTLLENKHQVVLTCDRYPKEI
KGLEERLKSRFGWGLPVAIEPPDLETRVAILMSKAQQSGIDLSPEVAFFI
GKRIRSNIRELEGALRRVIANAQFTGRPITLEFAKEALRDLIALQDRMIN
VENIQKTVSEYFKIRQADLLSNKRTRSLTRPRQIAMALSKELTSHSLPEI
GQMFGGRDHTTVLHACRKVQELKESDARFMEDFSNLLRILSN
>MCA1735 dnaB, replicative DNA helicase
MSEYARSIDKRVEALKIPPHSIQAEQAVLGGLLLDNQTWDVVADRIVEED
FYRRDHRLIFRAIRQLSERQAPFDVVTLSEVLEKTGELEEAGGLAYLAVL
ARETPSAANIAAYADIVRERAVLRQLIHVGTEIADSAYQPEGRGMSDLLE
QAEQRVFQIADQRQRGSAGFKPIKSLLAAAVDRIEMLFHKEGHITGASTG
FTDFDDMTSGLQPSDLIIIAGRPSMGKTTFAMNIAENVAIKERLPVAVFS
MEMPGEQLAMRMMSSLGRIDQHRVRTGKLEDDEWPRMTSAINILAETRLF
IDDTPALSPTEVRARCRRLARENGQLGLVVLDYLQLMQCSGGENRVAEIS
EISRSLKALAKELNVPVIALSQLNRNLEQRPNKRPVPSDLRESGSIEQDA
DLIVFIYRDEVYHPDSADKGTAEIIIAKQRNGPIGTVRMTFLGQYTRFEN
FIADPYSSEGY
>MCA1286 dnaE, DNA polymerase III, alpha subunit
MEPKFVHLRIHTEYSLVDGIVRIKPLVKRLSEFGMPAVAVTDQCNLFALV
KFYKAAMGAGIKPIAGADVWLQNPQDVSSPHRLTLLVQNQEGYLALTELI
SRSYQENQHQGVPMLMPEWLADCNAGLIALSGGRDGAIGHALLAGSGAEA
TRLAEYWGGMFRDRFYLEVCRTGRANEERYIDAAVELAACLDLPVVATND
VRFLSAKEFEAHEARVCIHQGRVLDDPRRPRDYSEQQYLRSEEEMLSLFA
DLPEALENSVEIARRCNLGLTLGKNFLPDFPVPAGMTPDDFFSEQSRQGL
KERLAVRPPSGAGTLEERTQRYWCRLELELSVIREMGFPGYFLIVADFIQ
WAKSQGIPVGPGRGSGAGSLVAYALKITDLDPIEFDLLFERFLNPERVSM
PDFDVDFCMERRDEVIDYVARKYGRDKVSQIITYGSMAAKAVVRDVGRVL
GHPYGFVDRIAKLIPFELGITLSKALEDSEELRKSYEEDEEVRALLDLAQ
SLEGITRNPGKHAGGVVIAPSRLIDFSPLYCEPGGGNLVTQFDKDDVEAV
GLVKFDFLGLRTLTIIDWALADINAKRRAAGEEPVDINRIPLDDPKTYEL
LGRCATTAVFQLESRGMKDLIKRLKPDCFEDIIALVALFRPGPLQSGMVD
DYINVKHGRTKAEYPHPVLEPILKPTNGVILYQEQVMQIARDMAGYTLGG
ADLLRRAMGKKKPEEMAKQREIFIAGATRQGIDPSISSHIFDLMEKFAGY
GFNKSHSAAYALVSYQTAWLKAHYPAEFMSAVLSADMDNTDKVVVLIDEC
REMKLSILPPDINLSEYRFTVRGRREILYGLGAVKGVGQTAIDDILQERK
NNGPFTDLLDLCRRIDLRKANRRVLEAMIRAGVFDCFDRNRAALFAALPD
VVKAAEQQGAMSAAGQDDLFGGFTAESPAASSAGLVATEIEPWAEAERLA
QEKATLGLYLTGHPITPHERELEQIVTSRLGPLMGEGEGGRGDTRVVVAG
LIVDIRTRLTRSGQKMGFLSLDDRTGRMEIAVYTETFQRDGHHLAKDGLI
VVDGTLGYDEYAGQTRITAERILSIEDARAHFARCLRIEWPGAVPDGVPP
SFLAEFKKLLDRFAGGGCPVHVAYRGRRAQTVLRLGDGWRVHPRDELLGC
LRKWIGSSRVQVVYR
>MCA2993 dnaG, DNA primase
MAGRLPREFIDDLIARIDIVDLIDARVPLKKSGSSFLARCPFHSEKTPSF
SVSREKQFYHCFGCGAHGNAISFLMDYEHQSFPEALETLATLAGIDLPKA
MATPGANPSASLQPVYDILERAAGFYIQQLRDHPDAGQAKIYLRKRGLTG
EIARRYRLGYAPPGWNSLPADWPRTLLIQSGLVIEKGRSCYDRFRHRIMF
PIRDRRGRVIGFGGRTLGDDTPKYLNSPETEVFRKGKELYGLHELLESTP
RPRRILVVEGYLDVIALAQHGINDAVATLGTSTSAEHVHLLFRFTREIVF
CFDGDAAGHKAAWRALEASLPLLQEGREIRFIHLPAGEDPDSLIRKEGRE
AFESRIGQASPFSDYLFRTLQKDLDLRSIEGRATLQKQARELLDRLPVGA
FRTLMEQRLSEFTGVAPPAPASKSLENRLGHPSGQVRPPSAWRNVVTLLL
HRPRLAKLISPEIRARLIENPRAGPLIARILEYTDLRDTPTAGMLFEHLR
ETPEGELARNLLKPGLLTPEEGMEREFVDALDRVRALLRDERLSQLIEKS
KAAQLTDSEREELRKLTGGKS
>MCA3032 dnaN, DNA polymerase III, beta subunit
MKFRILREDLLLPLQQVIGVIERRQTLPILSNVLIEVEAGRMELAGTDLE
VQLVANTDMEGKESGRFTVPARKLMDICRLLPEGGELAFDVKPERVSLQC
GKSRFILGALPAENYPNFEHGDPEAVFDCEAQLLRRAIEKTAFAMAQQDV
RYYLNGLLLEIRQGRIRAVASDGHRLALFEDAVDGMPDVARQIIIPRKGV
LELGRLLARVEGSASVRISANNVRILFGTFSFAVKLVEGRYPDYERVIPK
TACRVVVVDRHELRGALTRVAVLSNEKFKGVSLEIGEGLIRLRAQNPEHE
EAEDEVPADVSGEAFAVGFNASYLLDAINAVASDAVRMSFTDANGSCLIE
DLSDSRYRFIVMPMRL
>MCA0720 dnaQ, DNA polymerase III, epsilon subunit
MRQIVLDTETTGLDPKAGHRIIEIGCVELLDRRITQNRFHVYINPEREID
AGAIEVHGLTNEFLAGMPVFRNIADDFLNFISGAELIIHNAAFDVGFLDH
ELSLLGENRGRIADYCGICDTLAMARKNHPGQRNSLDALCKRYNVDNSRR
ELHGALLDAEILADVYLAMTGGQITMLLEADAESGGARGSDGGFERFVVN
PSAGSVHAQPGPLGANSVEREQAAPRSVDTARPRLRVIRSTPEEAEAHAA
RLEAIAKASSGNCLWSR
>MCA1328 dnaZX, DNA polymerase III, gamma and tau subunits
MLYQALARKWRPHNFTEVVGQEHVVKALTHALEAGRMHHAYLFTGTRGVG
KTTLARILAKALNCEDRQGANPCGRCLICREVDEGRFIDLIEVDAASRTK
VEDTRDLLDNVQYAPNQGRYKVYLIDEVHMLSGHSFNALLKTLEEPPPHV
KFLLATTDPQKIPVTVLSRCLQFNLKRLTPEQIRAQMAQILASESIDFEP
AATKALARAAQGSMRDGLSLLDQAIAHCGGRLTNTGVSAMLGTVSREPVY
GALEALAESRADELLAVSATLAEFSPDYQDVVQQLLAILHQIAIAQFAPD
AIRQDDEAERVLTLARCLTPEDTQLYYQIALQGQKDLQLAPDPRDGFEML
LLRMLAFRPHSAEAAPRIVPTAAAPAMRAPSDTGIREPHRAREVTRQAPP
PAAAEASSSGASPWTTSDALNWPRMIEAMRLAGMTRQLASHCVLRTLTEH
ACELALDPRQAQIHTPTVTSNLETALQKLLGRPIKLTIRCESLDAETPAA
ADQRAQIERQREAELEIENDATVHALKDMFGAQIVAGSTRPLDHTEP
>MCA1746 fis, DNA-binding protein Fis
MRQDNRLLESFESPPKDPSPAPVVLSEQVRAALVNYLSQLDGISVTDMYT
LVMGEVERPLIRTVLEHCCHNQTRAAQLLGLSRSTLRKKMQQHGIE
>MCA1421 gyrA, DNA gyrase, A subunit
MTAFAKEIIPVNLEDEMKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLY
AMHELGNDWNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRY
MLIDGQGNFGSVDGDPPAAMRYTEVRMARIAHDLLADLDKETVDFVPNYD
DSEREPSVLPTRIPNLLVNGSAGIAVGMATNIPPHNLREVVDACLALIEN
PEAGVQDLMAFVPGPDFPTAGIINGAAGIREAYLTGRGRIYLRARCQFEG
EEGGRQSIIVNELPYQVNKARLLEKIAELVKEGKLEGISALRDESDKDGM
RMVIELRRGEAPEVVLNNLYQQTQMQSVFGINMVALLNGRPRLMNLRDLI
AAFIDHRREVVTRRTLHELRKARERAHVLEGLAVALANIDEVIELIKSSP
SPAEAKERLVSRAWRPGVVTELLERADAAEASRPRDLDPVYGLREGAYRL
SPIQAQAILDLRLHRLTGLEQDKIIAEYRALLEQIADLLDILAKDTRLMQ
VIRDELVAIREQFGDPRRTEIIADRLDLSAEDLITEEDMVVTVSHEGYVK
AQPLSDYRAQRRGGRGKQAAATKEEDYIEKLVVANTHDTILCFSSSGKVY
WLKVYELPVASRTARGRPFVNLLPLEEGERINAILPIREFDEAHFIFMAT
ASGTVKKVALSEFERPRPSGKIAIELRDDDRLVDVAITNGEQDVMLFSSD
GKVVCFHETDVRAMGRTAAGVRGMTLQEGRKVIALIIASEGTVLNITENG
YGKRTRLEEFPRHRRGGQGVIAIQTSARNGAVVGAALVEDEDEIMLITDA
GTLVRTRVSEISVLSRNTQGVTVIRLNPGEKVVGMDRIGSLPGGEEDELD
NGSGDSAETL
>MCA3030 gyrB, DNA gyrase, B subunit
MTTKPNEYDSSHIKILKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNS
IDEAMAGYCKRICVTVHEDESVTVSDDGRGIPVDIHPEEGRSAAEVIMTV
LHAGGKFDDNAYKVSGGLHGVGVSVVNALSERLWLEICRGGRRYRQEYRD
GEPLAPLAEVGPADTTGTTVRFKPSPQIFSNIEFHYEILAKRLRELSFLN
SGVRIELEDKRSGKNEVFEFEGGIRAFVEHLNKNKTPLFDKVFHLQAERD
GVGVEIAMQWNDSYQENVFCYTNNIPQRDGGTHLAGFRAALTRTVNQYIE
EQGLLKKQKVATVGDDAREGLTAVLSVKVPDPKFSSQTKEKLVSSEVKSV
VESVMAEKLNDFLLENPSIARTIANKVVDAARAREAARKAREMTRRKSAL
DIAGLPGKLADCQEKDPALSELFIVEGDSAGGSAKQGRDRRSQAILPLKG
KILNVERARFDKMLSSEEVGTLITALGCGIGREEYNPDKLRYHRIIIMTD
ADVDGSHIRTLLLTFFYRQMPELVDRGHVYIAQPPLYKVKKGRQEHYVKD
DAELNEYLLQLAIDKARLVVDEQSPPIQGQGLEKLSHEYLHVRKLIGRLA
HRYDEAFLEALTVLSPLSAAELEDEALRREWFAEVERIVNAEGPAHYVVA
VRSGDAPGDFTVQVDRRLHGVERTFEVGAGFFGGNDYAVLSAFGQRVAGL
FGDTSTVCFNDERRPVRSFKELFDWMLTEAKKGQHIQRYKGLGEMNPEQL
WETTLDANTRRLLQVRIEDAIAADEVFTTLMGDQVEPRREFIERNALQVA
NLDV
>MCA2531 hepA, RNA polymerase-associated protein HepA
MAGPLHTLRSGQRWISDTEPELGLGTVVGVEHDRVTVSFIASGERRIYAV
GNAPLSRVRFAAGDRVESVDGWSMQVEEVEEQDGLLVYLGKDADGKPRTL
EEIELNPFLQFNRPQDRLLSGQIDPGDVFRLRIETGEKLARLEQSPVLGL
VGPRTALIPHQLYIAHEVASRHAPRVLLADEVGLGKTIEAGLIIHHRVLT
GRTEKVLILVPNMLLHQWLVEMLRRFNLRFSLIGEDAYEDAAEEGSPFKD
VNLALSSLDFILKDPERRRYVLDVAWDMVVIDEAHHLEWTPEKPSPAYAF
VEMLARRTPGLLLLTATPEQLGKLGHFARLRLLDPDRFFDFEQFRQEEQE
YTALAGVIDKLLDSPRLDADTLGQLQHFLRHDRADALVGDLNDPEHAAAA
RNALIQLLLDRHGTGRVLFRNTRNTVHGFPSRLLHGRPLPLPEHYRTQKA
SLEARLWPESARPDPDWWRHDPRVHWLLDIAQRLKPSRSKLLVICHRQQT
AVDLENALRTLGGVRAAVFHEGMSIIARDRAAAWFAEEEEGAQVLVCSEI
GSEGRNFQFAHHLVLFDLPLDPNLLEQRIGRLDRIGQHHSIDIHVPYFED
SAQEILFRWYHEGLDAFHRPAAAGAAVFARLGDELRRVLLAPDTHAGITL
IQDTRTLAETIEAKLHAGRDRLLELNSCRPEPANRLVEAVAAWDRDTALW
PWLEAVCDAYGVVVEEHSTDCYILRPGEHLRVPKFPELPEDGVTVTLSRD
VALAREDMVFLSWEHPLVRGAIDLVLNGEHGNASLGFVSHPALASGQMLL
ETFHRIECPAPRRLQLFRFLPTTQLRTLLDHRGQDLGRIAMAEFDERPQT
FEPANVRAFVRSQKPNLEKLLALAETRAGTRLTEIVADSSRRMLDEMTNE
LKRLAALRSVNPSVRQEELDRLKDDAVEMHGYLQAARLRLDAVRLLITV
>MCA1451 holA, DNA polymerase III, delta subunit
MRLRPDQLVEALDRGLAPLYVLSGDEPLQLGEAADAIRMAARDRGYGLRE
LFHVEPGFSWSTFLEAGDSVPLFGDRRILDLRLNAKPDKEGAAALLRYLD
RPPADAILIVILPRLSRDELNTAWARAADRVGVIVQVWPLQGRELVAWLD
RRMNRLGLLADQSGLRLLAARVEGNLLAAAQEIEKLHILYGAGRIEDEQI
LAAVCDCARYDVFDLTTAMLEGHTLRTLRILYGLEGEGVAPPVVLWAITR
ELRSLAVVQKDTTRGLPMDGVLARLRIFDKRKEAFARAAKRLDRDGVLDA
IRLCCRVDRVAKGLEPGNPWLGLADVCLRIATSH
>MCA1995 holB, DNA polymerase III, delta prime subunit
MSDPIGRYPWLAPARRRLRAYLEAGRLPQGLLISGAAGVGKGVLADDFAR
RLLCASPPAEGACGTCHACRLVVAGNHPDYLHIEPEEAGKRITVELVRRL
IDRLSLKPQYGASRVVVIRPAHAMNMAAANSLLKTLEEPDPHTLFLLISE
RPAQLPATVLSRCQRLDVRLPEREEALRWLRGQGVGEEAEALLAMAGGAP
VRAVELHGGGDLAQRRRMLFDDWVAVLRDESDPLAVAERWAKEDGETVLI
WLRGWIADLIRISSTEASVPLRLANADLEPGLRKAAAGLDLRALFACLDG
VDAARRNLEGQANRQLVMEEILINWNRSRPRGARH
>MCA2947 hup, prophage MuMc02, DNA-binding protein HU
MNQSQLINAIHEDANGSLTKTVIQRVLIALANVAQEALANGDEVTIPGVA
KLTVKERAARTGRNPQTGETVEIPAKRVARASFVKALKERVQGGA
>MCA0532 hupB, DNA-binding protein HU-beta
MNKAELIEAIADAANLTKADAGRALDAVIDAITDALKKGDTVSLVGFGSF
AVKERAERQGRNPQTGDSITIKAAKIPSFKCGKALKDAVN
>MCA0699 ihfA, integration host factor, alpha subunit
MALTKADMVERLFSELGLNKRDAKELVDQFFEVIKASLESGRSVKLSGFG
NFDLRDKRQRPGRNPKTGEEIPITARRVVTFKAGQKLKATVEALQEPELG
KLDAERTGEV
>MCA1411 ihfB, integration host factor, beta subunit
MTKSELIESLAGKYPHLSPRDIEHAIKEMIGCMSEALAGGERIEIRGFGS
FSLHHRPPRVGRNPKTGESVHLPSRRVPHFKPGKELRDRVNSIKD
>MCA2438 ligA, DNA ligase, NAD-dependent
MSVPAEVVEKARKLREEIEFHNVRYYRLDDPLITDAEYDRLMAELLAIEA
RYPELVTPDSPTQRVGAPPVEAFTEVRHEVPMLSLENAFSEEDLTAFDRR
VRKELSRDTLEYVAEPKLDGLAVNLLYQDGVLVRAATRGDGEVGEDVTHN
VRAVRAIPLRLKGEDFPDRFEARGEVFMPKRGFLALNERARRSGEKTFVN
PRNAAAGSLRQLDARVTASRPLSFYAYGIGAFPDARLPATQHELLESLQR
WGLPVSPEYRVVRGAAGCLEYYRSLGERRHDLPYDIDGVVYKVDDLKAQA
GLGFVSRAPRWAIAHKFPAEEARTRVVGIDVQVGRTGVLTPVARLEPVFV
GGVTVTNATLHNADEIRRKDVRPGDTVIVRRAGDVIPEIVRVVPELRKPG
AEPFRMPEVCPECGSAVEAEPGEVLARCSGGLYCPAQHKESIKHFASRRA
MDIEGLGDKLVDQLVGRKLIATVADLYRLDLDRLAGLDRMGEKSAANLLA
ALERSKRTTLARFLYALGIRDVGEVTAKVLSEHFGSLEALMEATEEELLA
VADVGPVVSRHIRLFFAQPHNREVISQLLACGVSWEKPAPAPRKLPLQGL
VFVLTGTLASMSRDEARARLEALGAKCTGSVSRNTSFVVAGSEPGSKLDK
ASELGVPVLDEKGFLDLLERGRP
>MCA1864 mfd, transcription-repair coupling factor
MATPLTPPLPTTRRQALCWSGLHGCSDSLAIASAIGASPGLFVVVTADAQ
SALRIEQEVKTFLGGDAALLPFPDWEILPYDVFSPLPEITSQRLRTFYEL
SRIQHGLLITPVSTLMHRVAPRTHTLANTFSIRTGSAVNIDQTRQTLESV
GYQCVSQVYQHGEFAIRGSILDLYPMGSETPYRIELFDDEVETIRTFDPE
SQRSIEKVEDIELFPAREFPFDEAAIKKFRQNFRVEFPDAVSRSVLYQDV
SKGIAVGGIEYYIPLFVERMDTLFDYLPGDATLILHGDVEQAAAAYYAEA
ASRHDQRRHNLDRPPLPPARLFLEPEALTSSLASFSRVMIPAADAAPAAA
VKFDCAPPPALHPETKTQPPYEPLQCFIGEFAGKILLVAESAGHRETLAA
NLTKYRIRPRIVESWADFLAVPDPLCLMVAALDHGLVISDPPLAIVTEAQ
LSGDKAQQRRRRQRTPSKDFGQFLRSLEELEIGAPVVHREHGVGRYLGLQ
RIDTGGVESEFLTIRYANDDKLYVPVSALGMVSRYAGADPEHAPLHRLGS
EQWAKARRKALEQVRDVAAELLDIHARRAAASGRSFATLTEEYLSFAAQF
PFEETPDQETAIQDVIRDLAAPRPMDRVVCGDVGFGKTEVAMRAAFIAAQ
NGRQVAVLVPTTLLAQQHYKNFCDRFADWPMRIDVLSRFVSKKDQAQTIA
DIGDGKVDIVIGTHRLLQKDIRFKDLGLVIIDEEHRFGVAHKEHFKKLRS
EVDFLALTATPIPRTLDMALSGLREISVIATPPPHRHVIRTFVTEWDDTL
VQEAITREIKRGGQVYFVHNKIETQPRLAERLEKLVPGIRTRIAHGQMPE
RELENIMLDFYHQRFNVLLCTTIVESGIDVPSANTILIDRADTFGLAQLH
QLRGRVGRSHHRAYAYLLVPPKKAMTADAVKRLEAIEAAGELGAGFLLSS
QDLEIRGAGELLGEEQSGQIQEIGFTLYTELLEKAVNALKSGKQPELETD
HLAGTEVDLQCAALIPEEYLPDVHTRLVLYKRIANARSDDELRELQIEMI
DRFGLLPEATKQLFAVSALKNEAAKLGIAKIEAGATGGRLIFEAHPAIDP
AAIILLIQKEAATYKLDGPDKLRFIAKLPTPAERVRFVEALLDRLKA
>MCA1692 mutL, DNA mismatch repair protein MutL
MSGVELLAAPLRMRIRRLPPQLINQIAAGEVIERPASVVKELVENAFDAG
ARQVEVDVEQGGVRLIRVRDDGCGIDREDLGLALSRHATSKIASLEDLER
VASMGFRGEALPSISAVARLTLTSRTADVPCGWQVSADGSESDFDIQPAQ
HAQGTTVEVRDLFYNTPARRKFLRAEKTEFGHIQTLVQRMALARFDVGFR
LRHNQREVLRLQPDAEEGGRPERIGALCGPDFLEQALRVEFEASGLRLHG
WVGLPTFSRSQADLQFFYVNHRPIRDKLVGHAIRQAYQDVLYHQRQPVYV
LYLEIDPALVDVNAHPAKLEVRFREGRMVHDFLFSALHRAIAGHRPGRTA
SVVAAPATEHPAPLAEQPQQSQQPLFRVAETPQRPYLSSGDSETLGDLRR
LYSVSLPNPTETRAEQEIPPLGYALAHLKGVYILAENAQGLILVDGHAAH
ERITYERMKRQYQAGGIASQPLLLPVRIRLSRADADLAEEYGEHLARLGI
ELRRTGEGSVLVRSVPALLEGSDVERLVRDTLADLREHGSSGRLQETLNT
VLASMACHGSVRAGRKLTVPEMNALLREMEATERAGQCNHGRPTWVQLDT
QALDRLFLRGR
>MCA3072 mutM, formamidopyrimidine-DNA glycosylase
MPELPEVETTRRGIAPHIAGWRIVDVRVREARLRWPVPADLGETLTGRRL
TDVRRRGKYLLLDFDEGTLIAHLGMSGSLRICKPGFPPRKHDHVDLVFEG
DICLRYHDPRRFGCLLWTAEPPERHPLLAALGPEPLDKAFDGAHLHRLAA
GRNTAVKSFIMDSRVVAGVGNIYANEALFRAGIHPARPAGKISLARYRNL
GEHIAEVLAASIEQGGTTLRDFVNESGAPGYFKQVLRVYDRAGQPCRVCG
EPIRCVRLGQRATYYCPRCQR
>MCA0576 mutS, DNA mismatch repair protein MutS
MPDPSDLSRHTPMMQQYLRIKAEHPDRLLFYRMGDFYELFFEDARRAARL
LDLTLTSRGESGGERVAMAGIPYHAVDGYLARLIRLGESVAICEQVGDPA
TSKGPVERKVVRIVTPGTVTDEALLEERRDNLLAAVARDGAVFGLAVLDL
SGGRFTLQQPGSVAQLLNELERLNPAEILVSEDEPLTEELSGRRGLTRRP
PWHFDPESGRRQLLSQFGTQDLAGFGCEHLGLAIGAAGCLLQYLRDTQRS
ALPHIRSIRAETGTEYIGLDAASRRNLELDWHPSGRAEFTLLGLLDRTGS
AMGGRLLRRWLHQPLRDRTTLMLRQQAIGELLADRRFEALHDLLRGVGDV
ERIAARIALKSARPRDLSTLRQTLKALPALRETLHGTESALLGELTGRLV
DQPELSELLQRAIVDDPPQLIRDGGVIAEGYHAELDELRLLSENADRFLA
ELEEKEREHTGLGALKVGYNRVQGFYIELPRSQADRAPVHYIRRQTLKNA
ERYVTPELKAFEDKVLSARERALSCEKALYEALLEILGRWLPALQDCAAG
LAELDVLANLAERADRLNWVAPRLVDAPGIRIIGGRHPVVEQVGGTPFVP
NDLAFGPNRRMLVITGPNMGGKSTYMRQAAIIVLMAHIGSHVPAAEAEIG
PIDRIYTRIGASDDLAGGRSTFMVEMTETANILNNATAESLVLMDEIGRG
TSTFDGLSLAWASAEHLARETRAYTLFATHYFELTALAEECEDVGNVHLD
AVEHGDKVVFLHAVREGPASQSYGLQVAALAGVPQTVIDNARRKLEQLER
QARSAHQQAAPVAQLDLFLPPEPHPVVRRLESLDVDGLSPREALNLLFEL
KQSL
>MCA0857 mutY, A/G-specific adenine glycosylase
MASPPFSAFQQAVLDWFDLEGRHDLPWQRPRTPYRVWISEVMLQQTQVAT
VIGYFERFMRHFPRLAVLAEADLDEVLALWSGLGYYSRARNLHRTARIVT
ERHAGELPADPAVLTTLPGIGRSTAGAISSLGFDRRAAILDGNVRRVLAR
CHGVEGWPGASKVEKELWRLSEELTPSTRCADYNQAMMDLGATVCTRSRP
ACADCPLAGTCVARRQGRQTELPAPRRTGPAPVRSTLMLLMVDPDRRVRL
QKRPPAGIWANLWAFPEFDGLEELNAWFALHGIHAHRLEPLPPRRHTFSH
FHLDYTPVIVHCGVGHTGVEEAAQGLWHPLGAEIGFGVPAPVRRLLHELE
RVI
>MCA0584 ogt, methylated-DNA--protein-cysteinemethyltransferase
MPDLGLTDAESLGHCLFDTGFGVCGIAWRAFEGKDEAPVVTLFLLPEATA
AGTAAAMARRCGGSPTVPPPAIAEVIEKVRRHFRGDLQDFSRVRVEPDGA
GPFARAVYSAARDVPAGQIRTYGELARALNRPAAARAVGQALGRNPVPLI
IPCHRILGAGGKLGGFSAHGGVATKARMLRLEGVAV
>MCA0821 parC, DNA topoisomerase IV, A subunit
MNEVANYERIPLRDFTEKAYLDYAMYVILDRALPHIADGLKPVQRRIVYA
MSELGLSAQSKPKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYP
LIDGQGNWGSPDDPKSFAAMRYTEARLTPYAQSLLSELDLGTVDWVPNFD
GTLEEPQLLPARLPNLLLNGATGIAVGMATDIPPHNLREVVEACILLIDR
PEATVEELCGCIRGPDFPNEAELITPREELLKLYQTGSGAVRLRARYELE
DGNIVVTALPYQVSGAKLMEQIAAQMQAKKLPLVEDLRDESDHENPTRLV
IMPKSRRVEVEPLMSHLFATTDLERSYRVNLNIIGLNGRPQVKNLREILT
EWLSFRTETVRRRLQHRLDKVLARLHILEGLLLAFLDIDEVIAIIRGEDE
PKPVLMTRFGLTDLQAEAILELRLRHLARLEEIKIRGEQEALEQERARLE
RTLGSRAELDALIKQELRQDAEKFGDARRSPIVARQASQALDTTALIASE
PVTVVLSEKGWIRSAKGHEVDPATLSYRAGDGFLCAALGRSTQPAYFLDS
TGRSYSLAVHDLPSARGQGEPLTGRLNPPPGAIFVAVLAGSEEDWYLLAT
DGGYGFLVQLGELGSKNRSGKTLLTVPDHAKVMPPLRVANPDGDRLAFVS
AQGRLLVYPAEEIPRLNKGKGSKLIQIPPADLEARQDYLVAMAALPAGAA
LRATAGKRTLTLQPADLDHYRGSRGRRGNPLPRGFQRVERLETV
>MCA0820 parE, DNA topoisomerase IV, B subunit
MNEVYDASAIEVLSGLDPVRRRPGMYTDTTRPDHLAQEVIDNAVDEALAG
FARLIEIRLLADGGLEVRDDGRGMPVDIHPELGVSGVEVILTRLHAGGKF
SRKAYRYSGGLHGVGVSVVNALSLRLEVEVRRDGKVHAIAFEKGEKVGDL
TETGTTPRRATGTTVRFWPEAHYFDNARFSRSRLKHLLRAKAVLCPGLEI
RMTDDASGETETWCYRNGLPQYLLDQLQGCACIPDEPFTGAMEGRQEAVE
WAVLWCPEGAAPVAESYVNLVPTVQGGTHVNGLRTGLTEAVREFCEYRNL
LPRGIKIVPDDVWERCNHVLSVKMQEPQFAGQTKERLNSRECASFVSGVV
KDAFSLWLNQHPAVGERIAELVIESAQKRLRAARRVTRKKVSSGPALPGK
LADCAAQDVNRTELFLVEGDSAGGSAKQARDKDFQAIMPLRGKILNTWEV
ESGAILASQEVHDISLAIGVDPGATDLSGLRYGKICVLADADSDGNHIAT
LLCALFLRHFRALVKAGHVFIAMPPLYRIDVGKQVYYALDEAEKKGVLDR
IEAEKIKGKVNVLRFKGLGEMNPVQLRETTMNPDTRRLVQLSLDDAAATD
ERLDMLLAKRRAGDRRVWLEEKGNLADI
>MCA2573 polI, DNA polymerase I
MPVSDTSPLLVLVDGSSFLYRAFFALPPLTNSHGEPTGAVYGVINMLRKL
LQTYDGAHIAVVFDAPGRNFRDELFEHYKAHRPPMPDDLRSQIEPLHQVV
RAMGLPMLIEPGVEADDVIGTLARQAVERGFRVVISTGDKDMAQLVCDRV
TLENTMFDSRLDVNGVIVKFGVPPERIVDYLALVGDTSDNIPGVPKVGPK
TAAKWLAEYGSLDALIARAGEIGGKTGENLRASLELIPLSRELATIRCDL
PLPLTPESLERRPPDKAALRELYTRLEFKTLLRQLDAEADDPKAAPPVAA
APEVQTRYQAVMDPAAFDRWLEKLEAAELFAFDTETSSLDYMRAEVIGLS
FAVEPGAAAYVPLAHDYPGAPPQLDRAMVLERLRPLLEDPGKAKLGQHLK
YDANVLLNHGIMLRGIRHDTMLESYVLNSTATRHDMDSLAERYLDRKTLH
YEDVAGKGAKQIPFARVSVEDACRYAAEDADVTLCLHRALWPRLESIPSL
RAVYETIEIPLVPVLSRIERAGVLVDVYKLAEQSRELERRMAEVEAEARA
VAGETFNLGSPKQIQTILYDKLGLPVIKKTPTGQPSTDESVLQDLAETFE
LPRLILEYRSLSKLKSTYTDKLPHQVNPVSGRVHTSYHQAVAATGRLSSS
DPNLQNIPVRTEEGRRIRQAFVAPPGHKLLAADYSQIELRIMAHLSGDAN
LLAAFAEDADVHRATAAEVFGVALEEVTSSQRRSAKAINFGLIYGMSAFG
LAKQLGIQQKLAQGYIDLYFARYPGVRAYMDRTRESARELGYVETLFGRR
LHVPDIQSRNGQRRQYAERTAINAPMQGTAADIIKRAMIALDAWIESSGA
PLRMIMQVHDELVFEVAEDFVSEATATVREHMSRAAELAVPLMVDIGTGD
NWDEAH
>MCA2594 priA, primosomal protein N`
METVVRVAVPIPAYRCFDYLAPAGVPLESLLPGVRLSVPFGNRIRVGYLI
AVVETPGCEVERLRPAAAVLDAAPLLSETDLKLLRWAARYYHHPLGEVIQ
SAFPVHLREGGGAELARPSGLVLTPAGAALDPATFRRAPVQRRLFEVLRG
RERPLPASRLAELAGSGRTVRDAARRLVERGWAEWVDLQDRRIPAVAGPP
LQLNPAQLGAVDEISQNLGRYGVFLLEGVTGSGKTEVYIEVIRRVITRGE
QALVLVPEISLTPQLERRLRERIEAPLAVFHSGLSETERAAAWLGFQKGE
VGVLLGTRSAVFAPMRWPGVIVLDEEHDRSFKQQEGFRFSARDVAVMRAR
MADIPLVAGSATPSLESIRNVQRGRYVRLVLPARAGAAVAPRYRVLDIRA
RRLQDGLSEGLIAAMRDTLAAGDQVLLFLNRRGFAPALVCHGCGWVARCR
RCDANLVLHARESRLRCHHCAAEHGLPGCCPSCGQEDLRPLGVGTERVDE
ALRRLFPEVGVARIDRDSTRGRRSLERMLERVQQGEVGILLGTQMLAKGH
HFPGVTLVGILDVDAGFYSTDFRAAEHTAQLIVQVAGRAGRGGKPGTVLL
QTRHPDHPLLQRLLRDGYPGFAAAELAERESACLPPFGYQALWRAESKEL
ALSMDFLARLREEADGKNGAVHWLGPAPAPMPRQAGRYRAQLWLKSARRE
ELHAVLTDALARLQETPERRVRWSLDVDPVDFY
>MCA0387 recA, recA protein
MDENKRKALGAALSQIEKQFGKGSVMRMGDVAAVRDIDVIPTGSLALDIA
LGCGGLPRGRIVEIYGPESSGKTTLTLEVIAQAQKTGGVAAFVDAEHALD
PVYAEKIGVNLDDLLVSQPDTGEQALEIADVLVRSGGVDVVVIDSVAALT
PKAELEGEMGDSHMGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIG
VMFGNPETTTGGNALKFYASVRLDIRRSGAIKNGDEVIGNETRVKVVKNK
VAPPFRTADFEILYGEGISREGELIDLGVNHDIVQKSGSWYSYGGDRIGQ
GKDNVRIYLKEHPEVAAAIEAAVREKALAGFQHAPSAERAALEESGF
>MCA0691 recB, exodeoxyribonuclease V, beta subunit
MSAVRPLDVFRCPLAGVNLIEASAGTGKTWNICGLYLRLLLEQEREVQNI
LVVTFTNAATAELRERIRSRIVETLVYLRGGGGAADPFVTGLVAALEGGF
DRALLRQRLERALLAFDEAAIFTIHGFCQRALAGTPFAAGLPFALELVQD
DAMLAQEVANDFWRRRVAAGGLSRAMIAHLLEAGDDPEKYASLLGHALAK
SLSDWRWPEPVEPPDERDEQALLAAFGEARRLWQADAFGIVRLLEEAIDQ
LNGVSYKAASLETARKGWDAWFATNDPLAPVEDKVQLFRAAMLKGGTKKG
NTTPYHPFFDAAENLLALKDGIQGRLAVARLGLLRELVEHGAEALRAEKR
RRRVIGFDDMLWNVHEALTSGCYPWLAPALRSRYPVALIDEFQDTDPLQF
AIFRALYLAEGAVSGPVFFVGDPKQAIYGFRNADLYTYLGARHQADREYT
LVENQRSVTEVIDACNALFGANPRAFLLEGLEYRPVRPGAKPRPVFTDVT
EPRSPFQVWLLPRDEAGGWLPRTEAVRRCTDTTAAEIARLIQEGMAGRIR
LGERALRASDIAVLVRRHAQGRLIRQALARLGVGSVELSQASVFHTLEAE
EIERILLAVLEPGRDRLLRAALATEIMGCDALTIAGISADEDRLLEIMLR
FGEYRELWQLRGFGPMYRRLLHDEGVARRVLAQPDGERRLTNLLHLGELL
HQAQAGLTSPDALLRWLQSRRRDSAAQEDAQLRLESDQNLVQIVTIHKSK
GLEYPVVFCPYLWEGNRGARGKQEGIEYHDESGVPVLDFRPEAKNDPGIK
WQRRQEEDAETLRLIYVALTRAVQRCYLFAGVYRTKREASASCGESTRSM
LNWLACGKDHSPEQWQDAKTRLDPAHIEAGWRALPDAIGVAPMPAIVVPA
MAGPSSGLERLAAQTPPAWIPPGWSTGSFTSLVRAMEAGGEGRDHDALSL
APALGPPPAALPENDILRFPRGAAAGTCIHHLFEQADFTDPAGWDDAIGR
ALALRPQGSETAAPAMLKSLLADVLATDLGDGLRLSEIGRGQRLSELAFR
LPAEGLDPVRLNALLRDHGYAMGKLDFRLLSGYLQGAIDLVFRHRSRYYL
LDWKSNHLGYTREDYGPPALAETMAAEGYHLQYLLYTVALDRYLARRLPG
YAYTSHFGGVYYLFVRGVRPAWRGAGVYFQRPAEDCIAALDALIGGRRGA
>MCA0690 recC, exodeoxyribonuclease V, gamma subunit
MPSPLNIFFSNRFEILTQRLFDDLAQGPADPFVAEQVIVPSLAVRRRLEL
DHADRFGVCANVEFSYLAHWLWVQIGQVIEVGASSPFAPATLTWRVFRML
GEEALVSAHPRLKSYLARADGAMRFDLAQRVAHLLEQYLTYRPDWLAAWL
EGRPASGLPEASREDEAWQAAFWRTLVDELEVRREHPSAAFFRAVEAMGP
EATRRAGLPARAHLFCLPTIPPLYLDILGKLARWTELHLYVLNPCREYWF
DIVDPRRLNYLEVRGDALYRETGNRLLANWGQQTQAHIDLLFDKAEGAVI
DDAQFEPPARISLLAAVQEAILDLRDPEPGCCASVAGDRSIEVHVCHSLV
RELEVLHDQLLALLARPDAPKVSDILVVMPRLEEAAPLIDAVFGTAPAAR
RIPYAITGLRRTVANPAAAALLTLLGLFASRCKASAVYEFLQRPLVHARF
GLGLDDLECIHDWFQAAGIRWGLNGAHRKAVGLPEVERHSFCDGLDRLFL
GYALGDVPVQFDGRLPAGSPEGSEALALGGFAHFVDLLTHWHRVWSTPAT
AQTWGERLNAVVGAFLMETPETVPDLQEVREAIAALSRHWGEAAVTGTIE
PEVVRVALESLLDDPARGGTPSGRLTFTAMASLRSLPYRVVCVIGLNDGE
FPHPDRPAEFDLIAQAPRRGDRQRRYDERNLFLDLLLAARERLYLSYTGR
SVRDNAPLPPSTLLSELLDYLLPLVAAAGESPEEARRRLVVEHPLQAFSP
VYFDAAVAKDPRLVSFNSEYCEALRAARSPRPSGEGVRACESHSQEPEEC
SAILAERERADHGPAGPIAGEEQNDPDFEHAPFFPAPMAAPEPEWREPNL
DVLKRFFRNPCRYLLEQRLGLTLAEGEAELADDEPFLPAYFARGEVAERL
LPLMLSAATEEAVEVVARAGIEFPQGQLGELLLKGELTRIREYAERIAGQ
TQEEPLQPLPGRLAFQIEGETWTLSGALGQVWRRGLVRWRYDDTRPVDYL
SGWLDHLFLNALAVRGVEPTTTWISRDGEYRLRPVAAAQERLRELVALYR
EGLRLPLHFFPRSAWACALGLKQGGSQAAERQARKRWEGSGDRRGESEDL
AYRQALRGQADPLDGAFFRTVRTVFGPLLDHLEDGRIA
>MCA0692 recD, exodeoxyribonuclease V, alpha subunit
MSAGESGYSSEHLLAAGFARRCLRWAKDPAAPGVLERAAFLASFATTDGH
VCTDLAELAEDFPQHGPDLLRTLLLGSGVVGTPGGEPRPLVLDDEGRLYL
YRYFDYERRLASALQRLARGRDSLTPPSEAVREQLNALFPPASGGPDWQK
LAAALALLGRLTVISGGPGTGKTTTVVNLLACLLVQNPDCRIALAAPTGK
AAARMLDALRERAAHLPGSLREKLPAAASTVHRLLGVIPGSGNFRHHAGN
PLAVDVLVVDEASMLDLGLATRLVEAVPVDGRLILLGDKDQLAAVEAGAV
FAELSADPRLSPPVIERLAALTQTDPAAIVTAAPVRSTPLEDCVVWFSRN
YRFRSDSGIGRLAARVNSGEADAVIAELRAGGESGVIWQEDGAAAPGAGL
IETLLAGYADYLDVMRSGQAAPAAVFAAYNRFRILCAVRESPRGVEAINR
LIAREFRRRLGLGADERAEWYPGRPVMVLRNDYVLKLFNGDTGIVLADPS
GELRVHFPDAGGGFRAIPPARLPEHETAFALTVHKSQGSEFDEVALLLPD
RISPVLTRELVYTGITRARRAVSLVGAAPVLAEAIRRRTRRHSGLIARLE
EIG
>MCA3031 recF, DNA replication and repair protein RecF
MALLKLDIADVRNIESASLSPGEGLNLLFGANGSGKTSLLEAIYLLSRGK
SFRSPQSGRIIRFDRPCLTVSGSIGRPGAGIAVGVRLGRSEKEVRVGGRS
CDSSAQLIRLFPAVLIHPASVALLEGPPRWRRQMLDWGVFHVEQGYLDLL
RRFSRTLEQRNAVLRGDAPGSSLAAWSGELARWGTMIAELRSSYLDRIRM
HFGEMVSALLGRTDVELVVRPGWRAGWSYADALAASQPTDRRLGYTEPGP
QKGDFAVLVGGRPARDYLSRGQLKLLTYALLLAQAGLLEADQPGRVCLLV
DDIASELDSRNQERLLSLVKSTGLQSFVTFSGATQGVAAVVGRTARVFHV
EQGRIRTGS
>MCA2025 recG, ATP-dependent DNA helicase RecG
MATSRRPDGVSLDNLQGAGTKTLSRLNKLGIFKLQDLLLHLPIRYEDRTR
LTPLGALQPGQPALVEGGVAFTDVAGTSRRSLICRISDGTGFLDLRFFHF
RPEQLRALSSLRRIRCFGEVRVGVHGLEMIHPQYEALPETAPAPLETGLT
PVYPTTDGLSQQSLRRFVAQALRLAEPEHEKSFRLPPRLAPELDALSWWD
AVRTLHRPMDDCPKALERARRRLAYEELLAHHLSLARFRQEIRRRSAPVL
NTDEAIKTTFQSGLPFSLTGAQRRVIGEIESDLRSGRPMLRLLQGDVGSG
KTIVAAHAALAAASSGWQTALMAPTELLAEQHFHTFSGWLESSGVTTTLL
TGKIKGQGRREALAAIASGATALVIGTHALFQDAVEFHRLGLTIIDEQHR
FGVHQRLALRDKAHPLAALPHQLVMTATPIPRTLAILGYADLDCSVLDEL
PPGRTPVVTRLIPSTRRGEIIDRIANWIARGRQAYWVCTLIDESEALQCE
AAANTAASLAQTLPGLRIRLLHGRMSAAEKDGVMREFKAGESDILVATTV
IEVGVDVPNAGLMIIENPERLGLAQLHQLRGRVGRGPGDAYCILLYQPPL
SAIGRERLKILKDSSDGFAIAERDLRLRGPGEFLGVRQTGLARFRIADLT
RDADLIETVSASAERVLEHHPELVAPLIDRWVGRGVHYAGA
>MCA0628 recJ, single-stranded-DNA-specific exonuclease RecJ
MAKLYHPIQKRIVRRSLQGGGELAKRMSLASPPDASPLLARLYQSRSVFT
PEDLGRSLNELPAPSLLKGMDAMTAELEAAIRGQKSIMIVADFDADGATS
CAVAMRGLRALGAERVSFIVPNRFTCGYGLTPELVELIFRGGATPPDMLL
TVDTGIACHAGIAAARARGMKVLVTDHHLPGESLPAADAIVNPNLPGDGF
PGKALAGVGVIFYVLSGLRRRLRESGWFEGGRQPPNLAELLDLVALGTVA
DVVPLDRVNRILVHQGLQRIRAGRACPGIRALLEVADAKRGGAATTAGTL
GFTLGPRLNAAGRLDDMSLGIACLLADDMNAAKELAERLDGMNRERKTIE
AQMQADAWAMLRIGAEPLPRQSDRWSGSAAIVFDPAWHQGVIGILASRIK
DRLHRPVIAFARGEDGLLRGSARSIAGVHVRDVLCAVAARHPGLIVRFGG
HAMAAGLALEESRLAAFTEAFEAEVAGVLEGVELEHAVVTDGELPPDDFH
LDTARCLRDAGPWGQGFPEPLFDGEFDVLGMRIVGEKHLRLTLEVPGAAR
QVEGVAFFVADPPAWLGCRRLRAAYRLDVNEFRGVSNLQLGIEYMEPVS
>MCA1860 recN, DNA repair protein RecN
MLTSLSIRDLAVVSALDLDLRPGFTVLTGETGAGKSILLTALGLALGDRA
DSGLVRPGAERGEVSLCFDLGDAPSARNWLIDNELAEADEDTCVIRRTIG
TDGRSRAFINGRPATLPNLQALGRHLVEIHGQHAHLNLLQAGEQRALLDR
HAGSRELASELKRIFERWKEVSERIDRLQQDASSRNARQELLQYQVNELE
QLGIAGLDYRALSDEHELLANLGRVSEIGYAQLKLLYEDEQYSVNGLLAQ
STHAVGELAQLSKDFAEILELLESARIQVKEAAMALRHHLDALDPDPARL
AALEQRLAEVHQLGRKHQVRPEELPAHLETLRTELRSLATGEERLEHLLA
ERSELLSAYDAVARSLSEKRRAAAEGLETDISRLIHELGMPHGRFAVAFE
TDTESAPTPHGRDRIEFLVSANPGLPPRPLSRVASGGELSRISLAIEVAS
IAQKTTPTLIYDEVDTGIGGGVAEMVGTKLRSLGINRQVLCVTHLPQIAA
LGHQHLLVEKHAQDGVTQSTVRPLSMDERTGEIARMLGGLRITEQTLAHA
REMLALAH
>MCA1461 recO, DNA repair protein RecO
MPPEAPRRGDPSRVLLDHAYLLHRRDYRETSLLLELFTLRHGRIGVIAKG
ARRGRQGFAAVLQPFVPLLVSWSGRGELANLNHAEAAGIGVRLQHTALFC
GFYLNELLMRLLPPHDPCPELFGTYRGGLETLAAGEDLETALRSFELSLL
EAIGYGLQLRVEAESGEAIRPERLYSYRIDAGPVPAGDEADAVHGMTLLA
LRDRRFDTSQTRTEAKRLMRRIIAHHLNGRALKSRELFRSSS
>MCA1868 recQ, ATP-dependent DNA helicase RecQ
MSAAASSPLKTLQTVFGYERFRGLQAEVIEQVLNGGDALVLMPTGGGKSL
CYQVPALLRPGTGVVVSPLIALMEDQVGALLQLGVKAAFLNSSLDFQAQR
EVESRFLAGGLDLLYVAPERLLTERFLNLLDRVRIALFAIDEAHCVSQWG
HDFRADYWQLSLLHQRFPTVPRIALTATADERTRGEIIERLGLDEARVFC
SGFDRSNIRYAIGLKSNPRQQLLEFIRRDHEGDAGIVYCLSRKKVEETAG
WLCSKGLKALPYHAGLSAEIRQHNQRRFLLEEGLIVVATVAFGMGIDKPN
VRFVAHLDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVITLRSMVES
SDADELHKRVERHKLDAMLGFCELTSCRRQTLLQYFGDTLERPCGNCDNC
LNPVQTWDATEAARKALSCVYRSGQRFGAHYVIDLLLGKTSERVRGLGHD
RLSTFGIGRELDDKQWLSVFRQLVTRGFLVVDWEAHGALRLSPASRPLLK
GEQTLFLRKDEETGKTAASARDTRRSAIRFSDPRDENLFQALRGLRRQLA
DEQSVPPYVILHDAVLMEMVQCRPETHLQLARIPGIGERKLELYGDAFLE
LIREHAGQRGGGAGAERSTAEESLALFRLGLGVEQIAARRELKPSTVYTH
LAQAVARGALDALEVTGLSADEAARIGSVWRSLPQDRPGAIKPLFEALEG
RYDYGILRCLLVSWGALSN
>MCA1326 recR, recombination protein RecR
MRQAGAIAELIEALRCLPGVGPKTAQRMTLHLLQRDRDAAGRLSEALRQA
LEKVGLCAQCRTLTEHSLCEYCASPGRDRSLLCIVESPAEVLAISRSTGY
KGLFFVLNGRLSPLDGIGPEELGLDVLEQRLKDDGVAELILATNTTVEGE
ATAHYLSDMARRHGVRTTRIAHGIPFGGELEYVDGATLSHAFDGRKDF
>MCA2140 rep, ATP-dependent DNA helicase Rep
MNGLNPQQHAAVTTLDCPLLVIAGAGSGKTRVITEKIAYLIRQGTPARHI
VAVTFTNKAAREMKSRVGKLADDKSLRGLTVSTFHALGLEIVRREHKALE
LKSAISIFDEQDRQALLRELIRHGDHRFDPEQADAYAARISRWKNRFITP
ARARSLDEPDAAWIAALYEAYMHHMKAYNAVDFDDLILLPVMLFQQHAEV
LDKWRNQIRYLLVDEYQDTNQTQYELIKLLTGTLGKFTVVGDDDQSIYAW
RGAQPENLAQLRNDFPRLKVIKLEQNYRSMGRILKAANQLIGNNPHIFEK
KLWSAMGQGDPIRVLRHRDEIAEARQIAADIVHHKFRHNTRFADYAILYR
GNHQSRLFERALREFSVPYHISGGTSFFGYTEVKDVMAYLRLLVNPDDDA
AFLRIVNVPRREIGPTTLEKLGQYANRRHISLYAACFELGLEQSLPANAV
QRLRRFGEHIADTADRTARGDVFEIIDDFLGTIGYENWVRENSSDAKAAE
RKFGNVRELLDWLRRIAEKDGENRSLAETVAKATLLDVLDRNQEDDTGDR
VSLMTLHAAKGLEFPYVYLVGMEENLLPHQTSIDEDNIEEERRLAYVGIT
RARRDLTLSYCSHRKRYGEMIGCEPSRFLAELPQEDLEWPDRQPLDPETK
RERGRASLAQLRNLLSD
>MCA0719 rnhA, RNase H
MSETEPTVYAYTDGACRGNPGPGGWGVLLRYGSKTREIYGGERETTNNRM
ELMAAIRALETLSRPCKVKIVTDSQYVKKGITEWVAQWEKRGWKTAGRSP
VKNIDLWQRLIQAEQRHQVSWGWIKGHSGHPENEAADRLANRGIDELLQS
DKIPA
>MCA2443 rnhB, ribonuclease HII
MASLVAGIDEVGRGCIAGPVIAAAVIFAPGQDTHGLADSKRLRPDRRLVL
AGRICSESLAWAVGRAEVSEIDQLNILRATHLAMCRAVAALPVLPDWVRV
DGNRYPPLDCPGEAIVGGDASVAEIAAASILAKVFRDREMEVLDRLCPGY
ALGVHKGYPTRLHIDRLASRGASFFHRRSFAPVRAVIDRSSAS
>MCA2077 rnt, ribonuclease T
MTSRKSPLARRFRSYLPVVVDVETSGFDPHANALLEIAAVHLDMDESGNL
HPVRTHQLHVKPFEGAKLDEAALNFNKINPFHPFRFAVDEREALSQIFDA
VQQSIRQHGCTRAILVGHNPAFDIAFLNAASSRARIKKNPFHPFSTFDTA
TLGGLAYGQTVLARAAQAAGLSWDHQEAHSAAYDANQTARLFCTIVNRWK
RMTELLPPE
>MCA1222 ruvA, Holliday junction DNA helicase RuvA
MIGFIRGLLVAKRAPSLLIDVQGLGYELDAPMSTFYNLPEIGAEVRLYTH
LQIREDAHSLFGFGTEAERGLFRSLIRVSGIGAKLALAILSGISVDDFRA
CVERQDSARLVRLPGIGKKTAERLIIELRDRLDIGVPSLAPASFAGGAAP
LPAADPADEAVSALIALGFKPQEANTLVARQAAEGRSAEDLIRAALQSAV
R
>MCA1223 ruvB, Holliday junction DNA helicase RuvB
MTTQRLVSAAGQWDEEAIDRAIRPKRLEDYVGQRAMREQMAIFIQAALGR
GEALDHVLIFGPPGLGKTTLANIIANELGVNVRHTSGPVLEKAGDLAALL
TNLEPRDVLFIDEIHRLGAVVEEVLYPAMEDYQIDIMIGEGPAARSIKLD
LPPFTLVGATTRAGLLTSPLRDRFGIVHRLEFYSVEELSRIVARSARILG
SEITPEGAAEVARRSRGTPRIANRLLRRVRDFAQVMADGRITGEVAGKAL
EMLDVDPNGFDQSDRRLLLTMMEKFEGGPVGLDNLAAAIGEERGTIEDVL
EPYLIQQGFIMRTPRGRVATRNAYLHFGLKPPQRTNVNEELFGDE
>MCA1221 ruvC, crossover junction endodeoxyribonuclease RuvC
MTRVLGIDPGSRVTGYGILDWTGKPVLVAAGCIRTETDDFPERLRRIFEG
ISRIVEEFRPEEMAVEQVFMHKNADSALKLGQARGAAICAGVAHGLPVHE
YAARQVKLALVGKGSADKAQVQHMVCFLLGQAGPLALDASDALGVAFCHL
HHRQTLSRMSRMVRR
>MCA2382 sbcB, exodeoxyribonuclease I
MGGAPSFYWYDLETFGTDPARDRIAQFAGLRTDLEFNPIGPPDVLYCRPS
DDMVPYPDACLVTGITPQYAAELGVPESAFIATIHRIFMRPGTCVLGYNT
LRFDDEMLRHAFYRNLYDPYAREWKGGNSRWDVIDLARLTQALRPDGIEW
PRDSLGSPVFKLERLAAANGIRHESAHDALSDVRATVAFARLIAERQPRL
FQFALESRAKGAVERLLALGAWQPVLHVSEKFSASRHCIACVLPLCRHPR
IATRVIVFDLASDPAQLSDLSVDEIRRRLFTPSAELPAATGRLPLKGVHT
NRCPVVVPMSALRPADGERLGIDAVLCRRRARWLQDHAEDIIPKISAAFE
VDASFEAASDPELMLYRGGFIPDADRRALDQVHRLTPDQLAHYRPRFVDG
RFDELLFRFRARNFPETLNAEERERWTAFRRARLAGIGGGLSLAEFFSRI
DRLRSQESDAGKRAILDALEVYGRNLSG
>MCA2690 ssb, single-strand binding protein
MASRGVNKVILIGNLGADPEVRYMPNGGAVANLRIATSESWKDQQTGQTQ
ERTEWHSVVLYRRLAEIAGEYLKKGSKVYIEGSLRTRKWQDKNTGQDRYA
TEIIGNEMQMLDRAGGGMGGGMGVGEPDWDAPPAGGGSRPRSSGGGHGGG
STGGSGAGSSQFDEGFDDDVPF
>MCA0358 tag, DNA-3-methyladenine glycosylase I
MSPIIRCAWALRSPEETVYHDTEWGVPLHDDVKLFEYLVLDGAQAGLSWT
TIVKKREAYRQAFDGFDPAAVARYDEARIAALLANPGIVRNRLKIESAVR
NARVYLRIQDEFGSFDDYLWRFVDGMPVRNAWRHPREIPARTPLSDTLSR
DLKRRGCNFVGSTICYAFMQAAGLVNDHLVDCFRWSEVNGG
>MCA2839 topA, DNA topoisomerase I
MAQHLVIVESPAKARTIEKYLGKSFQVYASYGHVRDLIPKEGAVDPDHDF
SMKYAIIEKNKKHVQAISKAMEKADALYLATDPDREGEAISWHLYELLKE
QQVLDSKPVHRVVFHEITKRAITEAVENPKTLSTDLIHAQQARRALDYLV
GFKLSPLLWKKIRRGLSAGRVQSPALRMIVERELEIERFEVQEYWTIEAA
IQTEDQALSARLTHLAGEKLEQFSIVNEAQAQATRQSLLDQARGKLQVVR
VEERERKRNPAAPFTTSTLQQEAARKLGFTTRRTMTVAQQLYEGIDLGGE
AVGLITYMRTDSVNLAQEAVQELRALIESRYGKDNLPAQPRLYKTKSKNA
QEAHEAIRPTSAFRTPESVKAHLTPDQFKLYSLIWKRSVACQMVHATLNT
VTVDFACGSADNLFRATGSTVIHPGFMSVYREGRDDMPEESDEIYLPKLV
EGQEVDLKDVTPSQHFTEPPPRYTEASLVKALEEYGIGRPSTYATIISTL
QQRHYVELENKRFRPTDLGRVVNKFLTEHFNRYVDYNFTANLEDDLDAVS
RGEKDWIPLMREFWGPFHALIGEKDESLKRADVTHEAIDEKCPECGSPLS
IRLGRNGRFVGCTNYPQCKYTRNLAGKESEQTEPEVVEGRQCPKCHSPLV
IKTGRYGRFIGCSGYPACRHIEPLEKPTDTGVPCPECGQGTLTKRKSRFG
KLFYSCSTYPKCSYAVWNPPIAEACPACQWPVLTLKTTKRRGTEKVCPRK
ECGYAAPYEGEPLTDFAA
>MCA3092 ung, uracil-DNA glycosylase
MVPPVVVGQPVVSPVYLVGQAPGAKEGALGRPFAWTAGRTMFRWFANIGL
DEETFRERVYMAAVCRCFPGKNPKGGDRVPAPQEIERCSVWLRTELDLLR
PALIIPVGKLAASRFLTFGQLGDVVGKRHRVELGGVRTDLIPLPHPSGAS
TWHRREPGRSLLEQALGLIHSHPAWRSLCDWNAR
>MCA2694 uvrA, excinuclease ABC, A subunit
MDLISIRGARTHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQ
RRYVESLSAYARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGT
ITEIYDYLRLLFARAGIPRCPEHGVSLEAQTISQMVDHILAQPEGSRWML
LAPVVSERKGEHVQVLEDLRGRGFIRARIDGSVYELDEPPKLDLRKKHSI
EVIVDRFKVRADLAQRMAESFETALKLADGIAIAASMDDESREIVYSDKY
ACPHCGYSLSELEPRIFSFNNPRGACPECDGLGVKQYFDPALIVHNPELS
LAGGAVRGWDRRNAYYYGMIQSLAEHYGFDPEEPFSGLPPHVREVILHGS
GSEVIPFKVLSPKGTVLVQRYTFEGVIPVMERRYRETDSTLVREELAKYL
SSKPCPACEGTRLNRGARHVFIGDTNLPDLTHLPVRRVLEFFDGLEMGGR
RGEVAAKIVKEIRARLQFLINVGLDYLSLDRSADTLSGGEAQRIRLASQV
GAGLVGVMYVLDEPSIGLHQRDNQRLLDTLIRLRDIGNTVIVVEHDEDAI
RLADHVVDIGPGAGVHGGQVIAQGTPEDVMATPESLTGQYLSGQRRIALP
ARRNPPDPERRLTVRGASANNLKSLDVSIPVGLLVCVTGVSGSGKSTLVN
DTLYPAAARELNGASLTPAACSGIEGLEHFDKVVDIDQSPIGRTPRSNPA
TYTGLFTPIRELFAATPEARARGYTPGRFSFNVKGGRCEACAGDGVIKVE
MHFLPDVFVHCDVCKGQRYNRETLDIRFKGKTIHEVLEMTVEEAAGFFSA
IPAVARKLQMLMEVGLSYVTLGQNAVTLSGGEAQRVKLARELSRRDTGKT
LYILDEPTTGLHFHDIQQLLNVLHELRDRGNTVIVIEHNLDVIKTADWII
DLGPEGGEGGGRLVAEGTPEQVAANPDSHTGRFLAPLLERGR
>MCA2201 uvrB, excinuclease ABC, B subunit
MLRSGYAPSGDQPEAIRRLVEGLNDGELHQTLLGVTGSGKTFTIANVIAQ
VQRPTLILAHNKTLAAQLYGEMKEFFPENSVEYFVSYYDYYQPEAYVPAS
DTYIEKDSSLNEHIEQMRLSATKALIERHDTVIVATVSSIYGLGEPASYF
EMVLHLVRGDMIDQRTLVRRLAELQYTRNEAELRRGSYRVRGDVIDIYPA
ESEKEALRVELFDDEIERLSLFDPLTGEVISRIARYTVYPKTHYVTPREK
LLEAVEEIKVELKDRLEHLRSQHKLVEAQRLEQRTLFDVEIILEVGYCSG
IENYSRFLSGRAPGEPPPTLFDYLPDDALIVIDESHVTVPQIGAMYRGDR
SRKETLVEYGFRLPSALDNRPLKFEEFEARAPQRIYVSATPGPYERAHSG
AVVEQVVRPTGLVDPEVEVRPASTQVDDLLSEIRFRVQGGERVLVTTLTK
RMAEDLTEYLMEHDVAVRYLHSDVDTVERVEIIRDLRLGKFDVLVGINLL
REGLDIPEVSLVAILDADKEGFLRSAVSLIQTIGRAARNLHGKAILYADK
VTQSMQQAIDETERRRAKQIAYNERHGLTPRGITKSVTDILEVSIPGGSA
GSRKQAARVAEPGAGYKVAKPSEAARLIKQLEEKMYAHARDLEFEEAARL
RDEIQRIRESALMA
>MCA1681 uvrC, excinuclease ABC, C subunit
MERYNGRRHSPRLTPTMSTAPAAFDIKTFLATLTGAPGVYKMLDRNGEVI
YVGKAKNLKKRVASHFAQRGSSPKQNAMVARVQAIEVTVTRTEGEALLLE
NQLIKRHKPRYNINLRDDKSYPYIYVSTHQEFPRLAFHRGSRARPGRFFG
PFPSAAAVRDSLKTLQKIFPVRQCEDSYFVNRTRPCLQYQIERCTGPCVG
LVGAETYGEDVTNTLLFLEGRGEALIDRLAQRMEQAAQRLEFEKAARYRD
QISNLRTVLAKQLVAGEQGDLDMIACAIKGNIACVHVVFVRNGQQIGDRS
FFPRMQDEHDAAAVLGAFIPQFYLDKEIPRELLLSHEIRELELFESVLGQ
QAGRPVKISWRLRGERAKRLELARANAECALTTRLASQQTIADRLRHLTE
MLGLAEPPKRMECFDISHTQGDQTVASCVVFDRTGPLKSAYRRFNIEGIT
GGDDYAAMAQALSRRYQRIRAGEVEAPDILFIDGGKGQIHAAARTLAELG
VENIRIIGIAKGPDRKPGMETLFQTGCSDPIVVKPDNPGSLLIQHIRDEA
HRFAITGHRQRRAKTVTRSPLQAIAGLGPKRRQRLLRQFGGLRQISRADV
EALSSVEGINRQLAQRIYDLFHDHGA
>MCA1037 uvrD, DNA helicase II
MDITDIIAPLNEAQREAVTAPDRSLLVLAGAGSGKTRVLIHRIAWLLRAE
GVSPHAILAVTFTNKAANEMKARLEALLDLSTRDLWVGTFHGLAHRLLRR
HAADAGLHEGFQILDSDDQYRLIRRLLKTLELDEARWPPRQIQWYINAQK
DQGRRARNLPDSYDPFERQMRRIYLAYEELCQRSGLVDFAELLLRTHEFL
RDNADVLAHYQERFQHVLVDEFQDTNDVQYAWLRLLTQDRDNLSVVGDDD
QSIYGWRGAKVENLHRFRRDYPRHRMIRLEQNYRSTGNILSAANTLIARN
EGRLGKNLWTEGGRGEPISVYAAFNEQDEAGFVVNRIGRWVREGGRRSDA
AILYRSNAQSRQFEERLLAHGIPYRVYGGLRFFERAEIKDALAYLRLMAN
RHDDPGFERVINTPTRGIGAKTLDLVRELARFERLSLWSAARKLIADNVL
PARATGALAGFLDLVETMAGAAQGRALWEQVELAVKGSGLLEHYRKEKGE
QAEARVENLEELVGAARQFELSPLIDPELGGLDQFLAHAALEAGENQGET
FEDCVQLMTLHAAKGLEFDLVFLVGLEEGLFPSLQSLEDPARLEEERRLC
YVGITRARRKLYITHAECRRLYGKETYPRRSRFLRELPPDCLEEVRMKGG
VSRPVASAMQSGDASAMLGADAPGEFRLGQRVRHGKFGEGVILQREGDGA
QARVHVNFAEVGAKWLMLAYAKLEPI
>MCA0861 xerC, integrase/recombinase XerC
MAPDSLEQLDDYLDRLARRASRHTHAAYRRDLCAFHAYCDSVNLAGWADV
DAARIRAYVGTRHHRGELSARSLQRLLAAIRGFFDDLLKKRLLDVNPARA
VRPPRSGRRLPRLLDVDAVAGLLDAPADDRLETRDRAMWELFYSSGLRLS
ELVGLDVVDVDFGAGSVFVRKGKGGKARYVPVGAKALEAIGAWLEARRVL
TGAGQPALFLSRQGRRIAPRTVEMRLERWRAKLGLSERVHPHMLRHSFAS
HMLEASGDLRAVQELLGHATLATTQIYTHVDFQRLAAVYDQSHPRARRDR
PRKA
>MCA0396 xerD, tyrosine recombinase XerD
MSEVLPDAGAVREADLLAIQRFVESLWVEEGLSPHTLKAYGSDLRLFAAW
LATNRCAELTALTGEDIEAYLGWRHSRKSKSRTSARVLSSIRHFCAYRLR
RGEITGDPCALIAPPKLGRFLPDTLTESEVEALLAAPDVDTPLGFRDRAM
LEMLYATGLRVSELVGLSFGQISLRQGVVRISGKGDKDRLVPVGEEALDW
LERYLDKVRPVTLKGRQSDFLFVTDRGGAMTRQAFWHLIKRYAGQAGISK
PLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQERLKE
LHTRFHPRG
>MCA1818 xseA, exodeoxyribonuclease VII, large subunit
MNLRSSPDGRPEFVYTVSRLNREARITLSSHFGTLWVEGEVSNLAAPASG
HLYFTLKDAEAQVRCAMFRSSGRLLGFKPTNGDHVLARAQVGLYEPRGDY
QLIVDLLEEAGDGVLHRAFEALKKRLDAEGLFDPARKKPIPRFPTCIGVV
TSPTGAAIRDILTVLARRYPAASVIIFPAKVQGSEAPAELIRALQQADAS
GWCDVLLLARGGGSMEDLWAFNDESLGRAIVACQTPVVTGIGHEVDFTIA
DFAADLRAPTPSAAAEAVTPDRIDLGVRLQRLESQLRRSFLGRLETVQQR
LDFVERRLRQCHPKQRLGRQAQRLAELKHRLARNAAARLNLERQRLQGLE
LRLVRHDPAQRVIHLTGKLDSLESRLRRSASLLLERRRERLQALGQRLDT
VSPLATLARGYSIALRAADDAVVHSWEDIQPGELLYTRLAEGSLISRVEK
AEPGDPPVFPGQSPRGR
>MCA0819 xseB, exodeoxyribonuclease VII, small subunit
MARKPPSFEEALTELEQLVERMEQGNLPLEESLKLFERGIELTRTCQKSL
QDAEQKVQILLEENSLPTLKPFRDEP
>MCA0321 xth-1, exodeoxyribonuclease III
MRIITLNVNGIRSAARKGFFDWLPKQNADIVCLQEIKAQTTQLNDELFWP
ESYACYYLEAEKKGYSGVALYARKEPDDVIQGLGWDDMDTEARYLEARFG
ELSVVSLYIPSGSSSEQRQAVKFGFLDRFLPFLDDCARSGRQYIFCGDWN
IAHKPIDLKNWRSNQKNSGFLPEERAWLDRVFEEAGWVDAFRAVNPEPEQ
YTWWSNRGQAWAKNVGWRIDYQVVSPGLRELIRSAAIYKEERFSDHAPLI
IDYDLTL
>MCA3070 xth-2, exodeoxyribonuclease III
MKIATWNVNSLRVRLPQVLDWLDSVQPGVLAVQETKLTDDAFPVEALRAV
GYHAVYSGQKTYNGVAVLSKAPVEDVLTDPPNLDDPQRRILAVTAGPLRI
INLYVPNGSEVGSDKYAYKLDWLAKVRDFIAEEMAAHPHTVVLGDFNIAP
EDRDVHDPESWREKILCSTPERDAFRAWAGLGLSDLFRRFEQPEGSFSWW
DYRAAGFRRNLGLRIDHILASLPLAGRCTACSIDKTPRSLERPSDHAPVI
AEFDGF