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# Chlamydophila pneumoniae CWL029, CWL029

>gid:14862  CPn0007  hypothetical protein
MRKLRILAIVLIALSIILIAGGVVLLTVAIPGLSSVISSPAGMGACALGC
VMLALGIDVLLKKREVPIVLASVTTTPGTGSPRSGISISGADSTIRSLPT
YLLDEGHPQSMRKLRILAIVLIVFSIILIASGVVLLTVAIPGLSSVISSP
AGMGACALGCVMLALGIDVLLKKREVPIVLASVTTTPGTGSPRSGISISG
ADSTIRSLPTYPLDEGHPQSMRKLRILAIVLIVFSIILIASGVVLLTVAI
PGLSSIISSPAEMGACALGCVMLALGIDVLLKKREVPIVVPAPIPEEVVI
DDIDEESIRLQQEAEAALARLPEEMSAFEGYIKVVESHLENMKSLPYDGH
GLEEKTKHQIRVVRSSLKAMVPEFLDIRRIFEEEEFFFLSARKRLIDLAT
TLVERKILTEQLERNNLRKAFSYLYQDSIFKKIIDNFEKLAWKFMILSKS
ICRFTIIFENHEHGVAKSLLHKNAVLLEKVIYRSLQKSYRDIGMSSAKMK
ILHGNPFFSLEDNKKTIMKEHAEMLESLSSYRKVFLALSDENVVDTPSDP
KKWDLSGIPCRDALSEISRDEQWQKKAHLKHQESLYTQARDRLTDQSSKE
NQKELEKAEQEYISSWERVKKFEIERVQERIRAIQKLYPNILEREEETTG
QETVTPTVQGTTASSDLTDILGRIEVSSREDNQNQESCVKVLRSHEVEMS
WEVKQEYGPKKKEFQDQMGSLERFFTEHIEELEVLQKDYSKHLSYFKKVN
NKKEVQYAKFRLKVLESDLEGILAQTESAESLLTQEELPILATRGALEKA
VFKGSLCCALASKAKPYFEEDPRFQDSDTQLRALTLRLQEAKASLEEEIK
RFSNLENDIAEERRLLKESKQTFERAGLGVLREIAVESTYDLRSLTNTWE
GTPESEKVYFSMYLNYYNEEKRRAKTRLVEMTQRYRDFKMALEAMQFNEE
ALLQEELSIQAPSE
>gid:14864  CPn0009  hypothetical protein
MWLDRYADKFILREKEEKMERHELFHATMVRKASGHAYAKAKAAFEKERS
NENQRKVKDVEKWLSKGLAEFRNQESRRARERLRELQTLYPEVSVEERVL
ERQRTKKVNLENLYADIEKKYHHCVREQEHYWKEVENKEAEYRENGEKVL
SAEEVSECLQRLEDCLETWSKKLTKAEESVFEMKFDATEKLGNKVLSDVT
NRLEILCEDAEEMIFRIEEIEMTLRMVELPLLFMKNTFEKASLQYNSCKE
MLAKVEPQCKESPTYRSSQERLERLNQDLQTAYTNCQERLQGFSDLESKV
RTCRDHLREQMKHFEVQGLNFINEELLWVGAELFTQARLDLVATVPYMEF
YLQYHNIKREKVRSQWMAKTERYREIRQAFQGVMKEDLLAEDTILKEEDY
WLLRDDWLLRDERKNRQRRLICNKIAAAQQRVKGF
>gid:14866  CPn0010.1  frame-shift with CPn0010
MLDPYRQERMDEITFHELYEKTTFLKRLHRKCALAKTTFEKKRSKKNLQA
VEEANARRLKYVRDWYDQEFQKAGERLEKLHALYPEVSVSIRENKIQETR
SNLEKAYEAIEENYRCCVREQEDYWKEEEKREAEFRERGNKILSPEELES
SLEQFDHGLKNFSEKLMELEGHILKLQKEATAEVENKILSDAESRLEIVF
EDVKEMPCRIEEIEKTLRMAELPLLPTKKAFEKACSQYNSCAEMLEKVKP
YCKESLAYVTSKERLVSLDEDLRRAYTECQKRFQGDSGLESEVRACREQL
RERIQEFETQGLDLVEKELLCVSSRLRNTECDCVSGVKKEAPPGKKFYAQ
YYDEIYRVRVQSRWMTMSERLREGVQACNKMLKAGLSEEDKVLKEEEYWL
YREERKNKEKRLVGTKIVATQQRIQEFQPSDIVESSNEKVSLMDKARFLF
NREDHS
>gid:14894  CPn0041  hypothetical protein
MLLLISGALFLTLGIPGLTAGVSFGLGIGLSALGGVLVVSGLLCLLVKRE
VSKVCPEEIPAVQPEETPEGVPVTPFEKPALDEAQKEQKTQKILDQLPQE
LDQLDRYIQEAFACLGPLKDLKYEDQGFLQDVKEEFQVFDFVQKDMIAEF
VELQQILCQEGRLLEFVINQTRYIGRDLFKREDSLYKLWEWLGYLPSGDV
RGERLKKSAREVVDRFMRTTCNIRKIAMTFDRHVYSVAKTAFEKAFGALE
TCVYESMRESYREAFCEYEKAKLLGDEEKSAHAEQRFQDIKNRWEDVKDA
FFWVKEDGKIEIDDAIGNSCKWSERYEEHRITRARWYKVAEHQLFNATMR
VKDSLREHNEARVAFEKERSKENQRQVQKKKEKRLRDLKELHDQELPRAQ
ERLRELQALYPEIAVSVVEARREVASDLEKAHESIDKHYQSCVREQELY
>gid:14896  CPn0043  hypothetical protein
MQVPLSPQLPPPPPDHSVGASFCLSKFRVLAITFLVLGVLLLISGALFLT
LGISGVSLGVGLGLSALGSVLVISGFLLLLERREVSGVGLEGIPTGIPVG
PSAEPSSEEIQKKQKAKQILDQLPQELDQLDTDIQHVLSCLGKLKDLKCK
DRGLLKDAKEKLQVFDFVWKDMMMEFVELQQVMDQESRYLEGLIHEVQSI
AHKLFVDDVNIRSHLGESCGYLPSEDVRGELLKRFAKEVVARFMKVTRDI
RKIAMAFNKNAYGAAKNAFDKAFGSLETCLYKSLTKSYRDTFCDYKRAKI
LPDENNSARAEQRFREVKDHWEDLKETVFWVKEDGRIDIEVLTAVGGWPD
RYPEHLILEKRKDKVMSHQLWEATMRVKEAEVTYSVARVAFEKDGSQQNQ
KKFQEKTKERLRCLKDLRDQECHRAQERLEKLTALYPEVSVSVVETERER
KFNLEKAYGNLEERYQSVVQDQEDYWTEQKNREAEFRAKGTKVRSMEEVA
EHLQILENLLEDCYKRLSKAETFALGVEREATEEIEYTILSDAANRLKVL
CEDIEDTLPRVEEIEMMLRMAERPLHPIKQAFTKAFVQYNRCKERLAKVE
PYYKESPAYVNSEERLQSLDQASQCIQRVPKGFKFRNGSMYI
>gid:14951  CPn0095  S/T Protein Kinase
MGEVYLAYDPVCSRKVALKKIREDLAENPLLKRRFLREARIAADLIHPGV
VPVYTIYSEKDPVYYTMPYIEGYTLKTLLKSVWQKESLSKELAEKTSVGA
FLSIFHKICCTIEYVHSRGILHRDLKPDNILLGLFSEAVILDWGAAVACG
EEEDLLDIDVSKEEVLSSRMTIPGRIVGTPDYMAPERLLGHPASKSTDIY
ALGVVLYQMLTLSFPYRRKKGKKIVLDGQRIPSPQEVAPYREIPPFLSAV
VMRMLAVDPQERYSSVTELKEDIESHLKGSPKWTLTTALPPKKSSSWKLN
EPILLSKYFPMLEVSPASWYSLAISNIESFSEMRLEYTLSKKGLNEGFGI
LLPTSENALGGDFYQGYGFWLHIKERTLSVSLVKNSLEIQRCSQDLESDK
ETFLIALEQHNHSLSLFVDGTTWLIHMNYLPSRSGRVAIIVRDMEDILED
IGIFESSGSLRVSCLAVPDAFLAEKLYDRALVLYRRIAESFPGRKEGYEA
RFRAGITVLEKASTDNNEQEFALAIEEFSKLHDGVAAPLEYLGKALVYQR
LQEYNEEIKSLLLALKRYSQHPEIFRLKDHVVYRLHESFYKRDRLALVFM
ILVLEIAPQAITPGQEEKILVWLKDKSRATLFCLLDPTVLELRSSKMELF
LSYWSGFIPHLNSLFHRAWDQSDVRALIEIFYVACDLHKWQFLSSCIDIF
KESLEDQKATEEIVEFSFEDLGAFLFAIQSIFNKEDAEKIFVSNDQLSPI
LLVYIFDLFANRALLESQGEAIFQALDLIRSKVPENFYHDYLRNHEIRAH
LWCRNEKALSTIFENYTEKQLKDEQHELFVLYGCYLALIQGAEAAKQHFD
VCREDRIFPASLLARNYNRLGLPKDALSYQERRLLLRQKFLYFHCLGNHD
ERDLCQTMYHLLTEEFQL
>gid:14983  CPn0126  hypothetical protein
MVFSYYCMGLFFFSGAISSCGLLVSLGVGLGLSVLGVLLLLLAGLLLFKI
QSMLREVPKAPDLLDLEDASERLRVKASRSLASLPKEISQLESYIRSAAN
DLNTIKTWPHKDQRLVETVSRKLERLAAAQNYMISELCEISEILEEEEHH
LILAQESLEWIGKSLFSTFLDMESFLNLSHLSEVRPYLAVNDPRLLEITE
ESWEVVSHFINVTSAFKKAQILFKNNEHSRMKKKLESVQELLETFIYKSL
KRSYRELGCLSEKMRIIHDNPLFPWVQDQQKYAHAKNEFGEIARCLEEFE
KTFFWLDEECAISYMDCWDFLNESIQNKKSRVDRDYISTKKIALKDRART
YAKVLLEENPTTEGKIDLQDAQRAFERQSQEFYTLEHTETKVRLEALQQC
FSDLREATNVRQVRFTNSENANDLKESFEKIDKERVRYQKEQRLYWETID
RNEQELREEIGESLRLQNRRKGYRAGYDAGRLKGLLRQWKKNLRDVEAHL
EDATMDFEHEVSKSELCSVRARLEVLEEELMDMSPKVADIEELLSYEERC
ILPIRENLERAYLQYNKCSEILSKAKFFFPEDEQLLVSEANLREVGAQLK
QVQGKCQERAQKFAIFEKHIQEQKSLIKEQVRSFDLAGVGFLKSELLSIA
CNLYIKAVVKESIPVDVPCMQLYYSYYEDNEAVVRNRLLNMTERYQNFKR
SLNSIQFNGDVLLRDPVYQPEGHETRLKERELQETTLSCKKLKVAQDRLS
ELESRLSRR
>gid:15075  CPn0215  hypothetical protein
MSSAIARDCFPSPSPQPSSTLGVHPPKYKSLILSVSLIVLGVLLLCVGML
LLVNAIFSFSVLTVGLGGAGVFLGSLLLILGLIFFVSYHRKLSEATRSLE
QKITLEYQPWADLRKELNEVQEWSNFLLDEWEDFKEVVAQHKSQFATFEG
DLLLFGREVEKYETIWKELDGRDVALLTELKNIWGPLEFLRKKGDRLQCE
IDKLRKEVMKVGKSGLKLACELTKFKSALKDVKIEQECYRDKRKVEKLEV
FPEGYRRELLEVLKTRLSVEKEIQLFEEVVSAFEEKLASLHRTVFSEEEL
QEALDKAKAELLDIQVRKSVVEDLSCEPTLIQYHLLRLYEVQCRIVEQFL
TQTFSSEQEKVLEEYEALKARIRKTLRVKLDQVRANVAFVASTTDLLSES
ESLDGNDSVFEDAHDDFLD
>gid:15211  CPn0350  CT066 hypothetical protein
MAVEQSHIKEEIEKLIGKAIKRVCGNKENDLCRYLPGPSGGYMHHFTLKK
MKSAAPEQLLKMLKTFILESETPRTINPKPRAPRGSKKRRDFINFTKTDI
ERVLELARQVGDKDLLARFSPKKPLTSLKRELIRSIRNGIVSVELWNAYV
EAVKAVSSPNLEVTSPFV
>gid:15245  CPn0383  CT047 hypothetical protein
MTLPMQKSLTSFDDFSQAYAEKVPAIALIGSALEDDKDALIELLVSESFK
ELGGQGLMPATLMSWTETFALFQEHETLGIIHAEKFPLATKEFLSRYARN
PQPHLTILIFTTKQECFRELSKALPSALSLSLFGEWPADRQKRIIRLLLQ
RAERVGISCSQSLASLFLRALASTSLPDILSEFDKLLCSVGKKTSLDHSD
IKELVVKKEKASLWKFRDSLLKRDPVEGHQQLHFLLEDGEDPLGIITFLR
TQCLYGLRSIEEGSKENKHRMFVLYGKERLHQALNSLFYAETLIKNNVQD
PIVAVETLVIRMVNL
>gid:15334  CPn0473  hypothetical protein
MAVGGVGGSRSPSPIPPNRRNSEDGKVSPKDNLGEHTVSSSDSSLASQGP
TIEERKAQLGGTDKIPLPSVKEPGDSQTSGRSGVLQRIWKGVKGVFKKTP
QARPEVSSPRLPSHVQHGQRLPGLEGFRDRIQKRSENPEADLGKMKRSYS
DGDLDRVGHDSNEDSTEDSRSEGGEPSSKSSSFLSGVRGAVSKVHGALGD
IKGKFQRSASEDDLTTQGEDSAGDTVKERRSEEAEASSKSSSFLSGVRGA
TSTVQGALGDAKEKVSAFGEQAAGAIRSAPGNIRTRFQRSSSEGDLSNVN
KAAKHLRKALENLEKVAPEQVSPEVASRVQSLLARMEQLTHQEPPTVEDL
ITFVESNVGSDSVEYASIVPQDGSQAPAETAEAPETGGVEGSAAQGAWKA
LRDFVVSIFQAVASFFRAIASRLSSARRESAVDDLASESNTQWFVEQEGV
SNPSAAPSLSFAEEIARRAAEMSNRNAQSLEKLESGNVTDPVIQQGLGLA
RSFAPEGQ
>gid:15366  CPn0505  3-methyladenine DNA glycosylase
MLQEHFFLSEDVITLAQQLLGHKLITTHEGLITSGYIVETEAYRGPDDKA
CHAYNYRKTQRNRAMYLKGGSAYLYRCYGMHHLLNVVTGPEDIPHAVLIR
AILPDQGKELMIQRRQWRDKPPHLLTNGPGKVCQALGISLENNRQRLNTP
ALYISKEKISGTLTATARIGIDYAQEYRDVPWRFLLSPEDSGKVLS
>gid:15455  CPn0589  CT470 hypothetical protein
MQICVTGVVLRSRPLGKNHTLTTLFTPEGLFTFFAKQGQTLQCDYRETLV
PISLGKYTLHRNGSRLPKLTHGDILNAFEAIKQTYALLEASGKMIQALLA
SQWKEKPSHKLFSLFLNFLHRIPESSNPEFFAAIFVLKLLQYEGILDLTP
ACSLCKASLPYACYRYQGHKLCKKHQHKQAISIEKEEEQILQAIIHAKQF
SELLAIAEFPIAIAEKIFYLFDSLQEEKKSERNSSEDPYHEILRLSKVVH
PY
>gid:15543  CPn0673  CT552 hypothetical protein
MSIALNREEVWDNPHHLMFILMQFQQFSGEQDRFGSFLEATIRDRVSFLV
LQEKIATLK
>gid:15577  CPn0703  S/T Protein Kinase
MDCRGGIPLPEPQVIGGYHVKKILSKKLRSRVVHGLHPETRHSTVIKVFS
PSPSFTSRSVYNFLKEAQSLHQITHPNIVKFHRYGKWQDCLYIAMEYIEG
ISLREYILAQFISLPQAIDIIFDIAQALEHLHSRNILHKDIKPENILITP
QGKIKLIDFGLADWDTEIQRAHPSVIGTPYYMSPEQRQGESHSPASDIYA
LGLLAYELILGHLSLGRVFLSLVPERISKILAKALQPSPNNRYSSTREFI
QDIHHYRMSGDMQEDLRIKDHTVALYEQLQTQRFWLAPETLRFPDFISGV
LYHQGYPLYPHAYDTLLEGDVFNLWLGYSPISNATIALSVVKSLVCQQDL
QRPLLDRVCEINECLIRMKIPIDEMGISILCLEISKENKELSWIACGKTV
FWIKRQGRVVQDFESFSPGLGKITSLQIRETKVAWEIGDEAVVCTLELEE
SVASLKTLSLAELQDRRQKAIFCPIESIHGGIQSRQHGSNSPSTLISLKR
IR
>gid:15580  CPn0706  CT670 hypothetical protein
MAKYPLEPVLAIKKDRVDRAEKVVKEKRRLLEIEQEKLREKEAERDKVKN
HYMQKIQQLRDLLDEGTTSDAVLQIKSYIKVVAVQLSEEEEKVNKQKEVV
LAASKELEKAEVNLAKRRKEEEKTRLHKEEWMKEALKEEARAEEKEQDEM
GQLLFQLRQKKKRESGGS
>gid:15714  CPn0835  SWI/SNF family helicase_1
MVLEALAIFRQDAMQHLLKHRKEIVVDFCEDSYTIRIPDEEAPEGYWLST
LKLQDIDRLTFASCSCPDGECCLHLMTAYFAVYDALGLHPLHDKFRHSFW
YAVFSHFFLDSIPLQAQGEMVYTLESPHITLTIECLSEEVFQDWLRTIHA
SEEPTVFTNKTFLKSALYRTAKKFFFLNEEGAELTIGENSQGFPSHFSLQ
WQGLVFKAEILDFPTLEDIFPKLELAHTSLENVSHDISITNVTVCAEEAK
VNFTLSPVIHKKDRENHPKTRIGSVEYVAKTHEMITGPKAIALPIYAIPL
LADKFKDQLLSLLCYDSLEYRLRYDIRLLRDASFSFSAYLVTPGDLDNGS
LIYPNYCYSPTKGLMQVVGMLSPKQAFIVKSEQVEDFLNERGHLIQEPGF
QTFINERPEGHLTYNVTEQGVLLFHYDVGDPSSTEIRFGTWTYYTNQGFF
LEKKNDLPIQDGLIVEPQDIPAFIVKNDAALRRLPNFFSSPPNLKDLLIE
VHRQSRGKGLDLKPILVGLGESRCWLFGVFLYREDIGFSLIPTPLQGLCF
LPRVIPPENVPQFLTQYAQHERILFPNPQTRPPESYELVIQSIHRPHPAS
PLHLQLELKTNLGSVPIGIALQGLKSKHTFLFTQAGFLDLKQNLFQFLKQ
FLSTQKCVIAENTVIANITDVFKLDALAPLSVTDDTIANPEDLQFFSQLK
AACLPPIPQNLFSSDHQLRPYQNSGLLWMWFLYNHRLSGLLCDEMGLGKT
HQATALLDIVFQSSQPSARPKFLIVCPTSVLPHWEHILSNHLPGVSIFSF
HGPNKPSELPPADILLTSYGTLRQNYDKFYKIAFTIVVFDEIHMAKNKSS
QIHKILCRIDAQMKLGLTGTPIENNLLEFKGLLDIILPNYLPSDALFKKL
FTKRCSSEELEEIIPSQDLLLKLTRPFILRRTKKLVLPELPDKVESIIAC
SLSPDQEKLYMATLQREKSHIQKLETPEEPATNFLHIFALLNHLKQICDH
PAVFFKDPDQYKNYESGKWNAFVKLLKESLNAGYKVVVFSQYIHMIRIIT
LYLEEIGIKYASIQGKSLNRKEEIETFTTDPNCQVFVGSLLAAGTGINLT
AGNVVIMYDRWWNPAKENQALDRVHRIGQKNTVFIYKLITEDTLEERIHY
LIEKKIRLLDKVIASQDSNILHMLNREDLLTILSYKDEHGTSDSEESPVD
APVEDDTGVLPPEDS
>gid:15729  CPn0849  SWI/SNF family helicase_2
MLNFRKLRRDFSANILQDGKKLFEQGAVIDAKILSMNGETVCISAQVRGL
YDNIYECEIEVDRSESDTVDSNCDCSYNYDCQHIVALLFYLEQYFNEMVV
AYARSADLETDHEINEEVKKELKETFVAAATKEEERKDREHQKEILREYV
HAANALSANPFFLPLEYLEKDSAELAVLFVSVNEDTFAPANQPIEFQLVL
RLPCRSKPFYISNIRTFLEGVLYQEPIVLNGRRFFFTMQSFNASDRKLID
LLIRYVRYPNHTTEEKLLKSAYLMPPALGVILAKMFEHQLADRGGGSLGE
KESFSGLFCGNLEEPLCWSLTPAKMKFNLDFFDMPYKALLMTPVILVDDD
EVQPEQTMLLESDAPGIIHHFVYHRFSPQIKRAHLRSFSRLRDIAIPEAL
FGSFRENALPVFQEYAEIANVHLLNSFVTLPYVDEVRAICDMSYLDGELE
AKLHFLYGSLRVPAASLALQYQDVRAFISDEGILARNLVEERKMLEEVFS
GFIYDERDGAFRVKSEKKIVEFMTETIPANQHRITFNCPENLSGQFIYDE
TIFELSFREGSDINYYEADLKVHGLLKGVPLDLLWDCISAKKRFLELPKA
GQQSKGTRRGKVNSGKLPCILVLDLEKIAPVVQIFNEIGFKVLDDLVQKC
PLWSLTGISLDQFEALPVNFSMSERLIEIQKQIRGEIEFDFQDVPQQIQA
TLRSYQTEGVHWLERLRKMHLNGILADDMGLGKTLQAIIAVTQSKLEKGS
GCSLIVCPTSLVYNWKEEFRKFNPEFRTLVIDGVPSQRRKQLTALADRDV
AITSYNLLQKDVELYKSFRFDYVVLDEAHHIKNRTTRNAKSVKMIQSDHR
LILTGTPIENSLEELWSLFDFLMPGLLSSYDRFVGKYIRTGNYMGNKADN
MVALKKKVSPFILRRMKEDVLKDLPPVSEILYHCHLTESQKELYQSYAAS
AKQELSRLVKQEGFERIHIHVLATLTRLKQICCHPAIFAKDAPEPGDSAK
YDMLMDLLSSLVDSGHKTVVFSQYTKMLGIIKKDLESRGIPFVYLDGSTK
NRLDLVNQFNEDPSLLVFLISLKAGGTGLNLVGADTVIHYDMWWNPAVEN
QATDRVHRIGQSRSVSSYKLVTLNTIEEKILTLQNRKKSLVKKVINSDDE
VVSKLTWEEVLELLQI
>gid:15802  CPn0917  hydrolase/phosphatase homolog
MMKTKYEYSFGVIPIKFFGTPDKNTLKACFICHTRGKHWGFPKGHSEDKE
GPQEAAERELVEETGLSVVNFFPKVLIEQYSFNNEEQVFVRKEVTYFLAE
VRGDIHADPMEICDSQWLSLQEGLRLLSFPELRDLTVEADKFINNYLFSS
>gid:15882  CPn0994  CT837 hypothetical protein
MKRSRRNFEQALENLEKLKEISLATSNDSYLNNPARFNQRKQTGSSVMEM
KEALKNVENYLLEISCVSKSHADKALKESDFLIAGVQNVFSFLENQEDLY
KSLLDEYSEVTKAYDEVKKNLKEVPTYDLSTDEETEEHKEPECFLNNLVE
VKRDRSYELFYMLDEQDKRFYNDALVQIIYKQNKLHETVNEGDPLTKTLL
WNSEEVKNIASSLVIVNDMPLRLFYQRALSHLDIEAVVKVHNAVMALFFS
RYEATMVFKSPKKHNIWYFNDFLLFLREAWKDLNNNVIDSQERKQTKLLA
SALSLGIFESKLVFEEASRYLYFNIQTKLENANGKKPLSPGQYLTDAYEE
LHRLISKYPNGPLFKAMDRVLEHESRPYDPMILGILPSLEGTLKLHGKSI
DIIRSPSPVTQSSILYANCNEEFLGFLNAKAHRSEVTLVLNIQNRISRKE
RARSRVIEEALEQEEHAPYVHAFSFPEPEELLQNLESIHGDIETFADFFS
ILQEEFHKPLLASSFFLTKELKEFVGSFLKEKLTALKDIFFAKKKILFRN
DKLLLLHLLSYLIVFKLIERTNPNSIVVVSKDGLDYVSVFIAGFAFFSRE
AFWDEHSLKLLLTNVLSPTLVARDRLVFVSHIELLSKFVNCLKKNRQGFS
SLKSFFKDDIEGWEFTGYLHELTEVSHKHNL
>gid:15943  CPn1054  hypothetical protein
MQVLLSPQLPPPPQHSVGSISSPSKLRVLAITFLVFGMLLLISGALFLTL
GIPGLSAAISFGLGIGLSALGGVLMISGLLCLLVKREIPTVRPEEIPEGV
SLAPSEEPALQAAQKTLAQLPKELDQLDTDIQEVFACLRKLKDSKYESRS
FLNDAKKELRVFDFVVEDTLSEIFELRQIVAQEGWDLNFLINGGRSLMMT
AESESLDLFHVSKRLGYLPSGDVRGEGLKKSAKEIVARLMSLHCEIHKVA
VAFDRNSYAMAEKAFAKALGALEESVYRSLTQSYRDKFLESERAKIPWNG
HITWLRDDAKSGCAEKKLRDAEERWKKFRKAVFWVEEDGGFDINNLLGDW
GTVLDPYRQERMDEITFHELYEKTTFLKRLHRKCALAKTTFEKKRSKKNL
QAVEEANARRLKYVRDWYDQEFQKAGERLEKLHALYPEVSVSIRENKIQE
TRSNLEKAYEAIEENYRCCVREQEDYWKEEEKREAEFRERGNKILSPEEL
ESSLEQFDHGLKNFSEKLMELEGHILKLQKEATAEVENKILSDAESRLEI
VFEDVKEMPCRIEEIEKTLRMAELPLLPTKKAFEKACSQYNSCAEMLEKV
KPYCKESLAYVTSKERLVSLDEDLRRAYTECQKRFQGDSGLESEVRACRE
QLRERIQEFETQGLDLVEKELLCVSSRLRNTECDCVSGVKKEAPPGKKFY
AQYYDEIYRVRVQSRWMTMSERLREGVQACNKMLKAGLSEEDKVLKEEEY
WLYREERKNKEKRLVGTKIVATQQRVAAFESIEVPEIPEAPEEKPSLLDK
ARSLFTREDHT
>gid:15944  CPn1055  hypothetical protein
MLFLISGALFLTLGISGLSAAISFGLGIGLSALGGVLVVSGLLCLLAKRE
VPTVRPEEIPEGVSVAPSEEPALQATQKTLAQLPKELDQLDRYIQEVVSC
LGKLKDLRCEDQGLLKDAKEKLQVFDFVWKDMMTEFVELQQIMDQEGWYL
KCLIQEMRDIGSTLFMSQVSLFKLWEWLGYLPSGDVRGERLKKSAREVVD
RFMRRICDTRKVAMTFDRNAYGVAKTAFEKAFGALETCVYKSMTESYREA
FCEYKKTKILRDEEKILRICYLELRR
>gid:15945  CPn1056  hypothetical protein
MMLRVIELPLLPIKQALEKAFVQYNSYKAKLTKVEPCFRESPAYITSEER
LQSLDQTLERAYKEYQKRFQEPSRLESEVSGCREHLREQVKQFETQGLDL
IKEELIFVSDVLFRKMVSCLVSTVHVPFMEFYYEYFELHRLRLRAQWMAN
AEIYSKVRKAFPEMLKETLEKAKAPREEEYWLLCEERKSKEKRLILNKIE
AAQQRVKDLEPPPIKETGKQKRKKEYSFFIRLKS
>gid:15947  CPn1058  CT355 hypothetical protein
MKLYQTLRGIVLVSTGCIFLGMHGGYAAEVPVTSSGYENLLESKEQDPSG
LAIHDRILFKVDEENVVTALDVIHKLNLLFYNSYPHLIDSFPARSQYYTA
MWPVVLESVIDEFLMVADAKAKRIATDPTAVNQEIEEMFGRDLSPLYAHF
EMSPNDIFNVIDRTLTAQRVMGMMVRSKVMLKVTPGKIREYYRKLEEEAS
RKVIWKYRVLTIKANTESLASQIADKVRARLNEAKTWDKDRLTALVISQG
GQLVCSEEFSRENSELSQSHKQELDLIGYPKELCGLPKAHKSGYKLYMLL
DKTSGSIEPLDVMESKIKQHLFALEAESVEKQYKDRLRKRYGYDASMIAK
LLSEEAPPLFSLL
>gid:15463  ada  methyltransferase
MADDTLIPKLMKNSLSQACSEGLLIAKYPPLQVIVHFDNNLVVKTHLSVA
PVFSCLFLGPAAHKAMQEIVLWCSRYANKEHPPFSSHFAKDLIPSQYLEI
LNCVAEIPFGEQQTYAEIAKKTDTHPRTVGAACKQNPFLLFFPCHRVVGS
HGERNYVLGPVIHEILLKFENSY
>gid:15173  dnaA_1  Replication Initiation Factor
MRAWEEFLLLQEKEIGTNTVDKWLRSLKVLCFDACNLYLEAQDSFQITWF
EEHIRHKVKSGLVNNNNKPIRVHVTSVDKAAPFYKEKQMQQEKTAYFTMH
YGSVNPEMTFSNFLVTPENDLPFRVLQEFTKSPDENGGVTFNPIYLFGPE
GSGKTHLMQSAISVLRESGGKILYVSSDLFTEHLVSAIRSGEMQKFRSFY
RNIDALFIEDIEVFSGKSATQEEFFHTFNSLHSEGKLIVVSSSYAPVDLV
AVEDRLISRFEWGVAIPIHPLVQEGLRSFLMRQVERLSIRIQETALDFLI
YALSSNVKTLLHALNLLAKRVMYKKLSHQLLYEDDVKTLLKDVLEAAGSV
RLTPLKIIRNVAQYYGVSQESILGRSQSREYVLPRQVAMYFCRQKLSLSY
VRIGDVFSRDHSTVISSIRLIEQKIEENSHDIHMAIQDISKNLNSLHKSL
EFFPSEEMII
>gid:15287  dnaA_2  Replication Initiation Factor
MLTCNECTTWEQFLNYVKTRCSKTAFENWISPIQVLEETQEKIRLEVPNI
FVQNYLLDNYKRDLCSFVPLDVHGEPALEFVVAEHKKPSAPVASQKESNE
GISEVFEETKDFELKLNLSYRFDNFIEGPSNQFVKSAAVGIAGKPGRSYN
PLFIHGGVGLGKTHLLHAVGHYVREHHKNLRIHCITTEAFINDLVYHLKS
KSVDKMKNFYRSLDLLLVDDIQFLQNRQNFEEEFCNTFETLINLSKQIVI
TSDKPPSQLKLSERIIARMEWGLVAHVGIPDLETRVAILQHKAEQKGLLI
PNEMAFYIADHIYGNVRQLEGAINKLTAYCRLFGKSLTETTVRETLKELF
RSPTKQKISVETILKSVATVFQVKLNDLKGNSRSKDLVLARQIAMYLAKT
LITDSLVAIGAAFGKTHSTVLYACKTIEHKLQNDETLKRQVNLCKNHIVG
>gid:15484  dnaB  Replicative DNA Helicase
MIVLGCMLTGVHYLNLAANQLYEEDFYYLEHKIIFRVLQDAFKQDKPIDV
HLAGEELKRHNQITVIGGPSYLITLAEFAGTAAYLEEYVDIIRSKSILRK
MISTAKEIEKRALEQPKNVAEALDEAQNSFFKISQSTSVSQYTLVADKLR
GLTTTTDKPYLVQLQERQELFLQNAQGDNKSFFTGIPTHFIDLDQLIHGF
SPSNLMILAARPAMGKTALALNIAENLCFQNRLPIGIFSLEMTVDQLIHR
MICSRSEVDSKKISIGDLSGHDFQRIVSVINEMQEHTLLIDDQPGLKVSD
LRARARRMKESYDIQFLIIDYLQLLSGSGTLRATESRQTEISEISRMLKT
LARELNIPILCLSQLSRKVEDRANHRPMMSDLRESGSIEQDSDLVMFLLR
REYYDPNDKPGTAELIIAKNRHGSIGSVPLVFEKELARFRNYSAFECIS
>gid:15536  dnaE  DNA Polymerase III Alpha
MTWIPLHCHSQYSVLDAMSSIKDFVAKGQEFGIPALALTDHGNLYGAVDF
YKECTQKGIQPIIGCECYIAPGSRFDKKKEKRSRAAHHLILLCKNEQGYR
NLCILTSLAFTEGFYYFPRIDKDLLRQYSEGLICLSGCLSSSVSDAALKS
PEALLLELQWFQDLFKDDYFTEVQLHKMSEESIAGFKEEWLKQEYYSLIE
KQIKVNTAVLEASKRLGIPTVATNDIHYINANDWQAHEILLNVQSGETVR
IAKQNTHIPNPKRKVYRSREYYFKSPAQMAELFKDIPEVISNTLEVAKRC
DFTFDFSKKHYPIYVPESLKTLNSYTEEDRYQASAVFLKQLAEEALPKKY
SSEVLAHIAKKFPHRDPIDIVKERMDMEMAIIIPKGMCDYLLIVWDIIHW
AKANGIPVGPGRGSGAGSVLLFLLGITEIEPIRFDLFFERFINPERLSYP
DIDIDICMAGRERVINYAIERHGKDNVAQIITFGTMKAKMAVKDVGRTLD
MALSKVNHIAKHIPDLNTTLSKALETDPDLHQLYINDAESAQVIDMALCL
EGSIRNTGVHAAGVIICGDQLTNHIPICISKDSTMITTQYSMKPVESVGM
LKVDLLGLKTLTSINIAMSAIEKKTGQSLAMATLPLDDATTFSLLHQGKT
MGIFQMESKGMQELAKNLRPDLFEEIIAMGALYRPGPMDMIPSFINRKHG
KEIIEYDHPLMESILKETYGIMVYQEQVMQIAGALASYSLGEGDVLRRAM
GKKDFQQMEQEREKFCKRACNNGIDPELATVIFDKMEKFAAYGFNKSHAA
AYGLITYTTAYLKANYPKEWLAALLTCDSDDIEKIGKLIREAQSMGIPIL
PPHINVSSNHFVATDEGIRFAMGAIKGIGRGLIESIVEERDHHGPYESIR
DFIQRSDLKKVSKKSIESLIDAGCFDCFDSNRDLLLASVEPLYEAIAKDK
KEAASGVMTFFTLGAMDRKNEVPICLPKDIPTRSKKELLKKEKELLGIYL
TEHPMDTVRDHLSRLSVVLAGEFENLPHGSVVRTVFIIDKVTTKISSKAQ
KKFAVLRVSDGIDSYELPIWPDMYEEQQELLEEDRLIYAILVLDKRSDSL
RISCRWMKDLSIVNENIIYECDQAFDRIKNQVQKMSFTMSTSGKETKAKG
NKPNENGHTQALAPVTLSLDLNELRHSHLCILKKIVQKHPGSRTLVLVFT
QDNERVASMSPDDAYFVCEDIEELRQELVTADLPVRVITV
>gid:15827  dnaG  DNA Primase
MYTEESLDNLRHSIDIVDVLSEHIHLKRSGATYKACCPFHTEKTPSFIVN
PAGAHYHCFGCGAHGDAIGFLMQHLGYSFTEAILVLSKKFQVDLVLQPKD
SGYTPPQGLKEELRHINSEAETFFRYCLYHLPEARHALQYLYHRGFSPDT
IDRFHLGYGPEQSLFLQAMEERKISQEQLHTAGFFGNKWFLFARRIIFPV
HDALGHTIGFSARKFLENSQGGKYVNTPETPIFKKSRILFGLNFSRRRIA
KEKKVILVEGQADCLQMIDSGFNCTVAAQGTAFTEEHVKELSKLGVLKVF
LLFDSDEAGNKAALRVGDLCQTAQMSVFVCKLPQGHDPDSFLMQRGSSGL
IALLEQSQDYLTFLISEKMSSYPKFGPREKALLVEEAIRQIKHWGSPILV
YEHLKQLASLMMVPEDMVLSLANPQVTAEPQNIPIKQKVPKIHPHIVMET
DILRCMLFCGSNTKILYTAQFYFVPEDFKHPECRKLFAFMISYYEKYRKN
VPFDEACQVLSDSQILQLLTKRRLNTEALDTIFVQSLQKMADRRWREQCK
PLSLNQNIQDKKLEILEDYVQLRKDRTIITLLDPESELIP
>gid:15202  dnaN  DNA Polymerase III (beta chain)
MKFVVSRNELGNLIKKIQSVVPQNTPIPVLTHVLIETYNDELVFTATDLT
VSTRCVTKAKVYEKGAISIPSKRFFQLVKELTEANLEISSSAGEMAQITS
GSSCFRLLSMEKEDFPMLPDIQNALRFSLPAEQLKTMLQRTSFAVSREES
RYVLTGVLLAIANGVATIVGTDGKRLAKIDAEVTLDKSFSGEYIIPIKAV
EEIIKMCSDEGEAAIFLDQDKIAVECDNTLLITKLLSGEFPDFSPVISTE
SNVKLDLHREELITLLKQVALFTNESSHSVKFSFLPGELTLTANCTKVGE
GKVSMAVNYSGELLEIAFNPFFFLDILKHSKDELVSLGISDSYNPGIITD
SASGLFVIMPMRLHDD
>gid:15272  dnaQ_1  DNA Polymerase III Epsilon Chain
MSSQTMDVLIFYDTETTGTQIERDRIIEIAAYNSVTDESFLTYVNPEIPI
PDEASKIHGITTDAVLSAPKFPEAYEGFRKFCGEDSILVAHNNDGFDFPL
LGKECRRHSLEPLTNRTIDSLKWAQKYRPDLPKHNLQYLRQVYGFAENQA
HRALDDVVILHKVFTSLIGDLPPQQVLDLLQQSYHPKVFKMPFGKYKGQP
LVDIPKSYFEWLENQGALDKPENKDIKAAIALLHQPT
>gid:15524  dnaQ_2  DNA Polymerase III Epsilon Chain
MSLLKDTVFTCLDCEMTGLDVKKDRIIEIAAVRFTFDSVISSIEFLINPE
RVVSAESQRVHHISNAMLRDQPKIAEVFPQIKAFFKEGDYIVGHSVGFDL
QVLAQEMERIGETFLSKYTIIDTLRLAKEYGDSPNNSLESLAVHFNVPYD
GNHRAMKDVEININIFKHLCKRFRTLEQLKQVLAKPIKMKYMPLGKHKGR
CFSEIPLAYLQWASKMDFDSDLLFSIRHEIKHRQKGTGFSQVNNPFMEL
>gid:14893  dnaX_1  DNA Polymerase III Gamma and Tau
MTLQPYQASSRKYRPQIFREILGQSSVVAVLKNALVFNRAAHAYLFSGIR
GTGKTTLARILAKALNCVHLSEDGEPCNQCFSCKEIASGSSLDVLEIDGA
SHRGIEDIRQINETVLFTPVKAKFKIYIIDEVHMLTKEAFNALLKTLEEP
PQHVKFFFATTEIHKIPGTILSRCQKMHLQRIPEKTILEKLSLMAQDDHI
EASQEALAPIARAAQGSLRDAESLYDYVISLFPKSLSPDTVAQALGFASQ
DSLRTLDNAILQRDYATALGIVTDFLNSGVAPVTFLHDLTLFYRNLLLTN
STTSKFSSQYKTEQLLEIIDFLGESAKHLQNTIFEQTFLETVIIHIIRIY
QRPVLSELISSIKSRQFEGLRNIKEPTLTQQVSAPQPQPTYKEQSFLEKK
NQPAAEGKIISVEVKSSASIKSAAVDTLLQFAVVEFSGILRQ
>gid:15136  dnaX_2  DNA Polymerase III Gamma and Tau
MHLEEENQGWEALLRKVYHQEVPPAILLHGFTLPVLQDKAEQLASEILLS
SSPGSEHKVSQKIHPDIYQFFPEGKGRLHSIDLPRGIKKQIYISPFEANY
KIYIIHEADRMTLAAISAFLKVFEEPPKHAVIILTTAKVQRLPKTIISRS
LSIFIERGEKILCSKETFSYLFRYAQCEIPVTEVSQIIKESSETDKQVLR
DKVQRFMEVLLELYRDRYTLNLGLKASALNYPEHVKEILQLPLLPLDKVL
LIVESACRSLNNSSSAASVLEWVAIQLVSLQYKEKELVSVSPGQDLSN
>gid:15007  dnlJ  DNA Ligase
MKEENSQAHYLALCRELEDHDYSYYVLHRPRISDYEYDMKLRKLLEIERS
HPEWKVLWSPSTRLGDRPSGTFSVVSHKEPMLSIANSYSKEELSEFFSRV
EKSLGTSPRYTVELKIDGIAVAIRYEDRVLVQALSRGNGKQGEDITSNIR
TIRSLPLRLPEDAPEFIEVRGEVFFSYSTFQIINEKQQQLEKTIFANPRN
AAGGTLKLLSPQEVAKRKLEISIYNLIAPGDNDSHYENLQRCLEWGFPVS
GKPRLCSTPEEVISVLKTIETERASLPMEIDGAVIKVDSLASQRVLGATG
KHYRWALAYKYAPEEAETLLEDILVQVGRTGVLTPVAKLTPVLLSGSLVS
RASLYNEDEIHRKDIRIGDTVCVAKGGEVIPKVVRVCREKRPEGSEVWNM
PEFCPVCHSHVVREEDRVSVRCVNPECVAGAIEKIRFFVGRGALNIDHLG
VKVITKLFELGLVHTCADLFQLTTEDLMQIPGIRERSARNILESIEQAKH
VDLDRFLVALGIPLIGIGVATVLAGHFETLDRVISATFEELLSLEGIGEK
VAHAIAEYFSDSTHLNEIKKMQDLGVCISPYHKSGSTCFGKAFVITGTLE
GMSRLDAETAIRNCGGKVGSSVSKQTDYVVMGNNPGSKLEKARKLGVSIL
DQEAFTNLIHLE
>gid:15138  gyrA_1  DNA Gyrase Subunit A
MFNKDEIIVPKNLEEEMKESYLRYSMSVIISRALPDIRDGLKPSQRRVLY
AMKQLSLSPGAKHRKCAKICGDTSGDYHPHGESVIYPTLVRMAQNWAMRY
PLVDGQGNFGSIDGDPPAAMRYTEARLTHSAMYLMEDLDKDTVDIVPNYD
ETKHEPVVFPSKFPNLLCNGSSGIAVGMATNIPPHNLGELIEATLLLLAN
PQASVDEILQVMPGPDFPTGGIICGSEGIRSAYTTGRGKIKVRARLHVEE
NEDKHRESIIITEMPYNVNKSRLIEQIANLVNEKTLAGISDVRDESDKDG
IRVVLEIKKGESSEIIINRLYKFTDVQVTFGANMLALDKNLPRTMSIHRM
ISAWIRHRKEVIRRRTRYELNKAETRAHVLEGYLKALSCLDALVKTIRES
GNKEHAKERIIESFGFTEPQALAILELRLYQLTGLEAEKIQKEYEELLNK
IAYYKQVLSDEGLVKDIIRNELQDLLKHHKVARRTTIEFDADDIRDIEDI
ITNESVIITISGDDYVKRMPVKVFKEQRRGGHGVTGFDMKKGAGFLKAVY
SAFTKDYLLIFTNFGQCYWLKVWQLPEGERRAKGKPIINFLEGIRPGEEL
AAILNIKNFDNAGFLFLATKRGVVKKVSLDAFSNPRKKGIRALEIDEGDE
LIAACHIVSDEEKVMLFTHLGMAVRFPHEKVRPMGRTARGVRGVSLKNEE
DKVVSCQIVTENQSVLIVCDQGFGKRSLVEDFRETNRGGVGVRSILINER
NGNVLGAIPVTDHDSILLMSSQGQAIRINMQDVRVMGRSTQGVRLVHLKE
GDALVSMEKLSSNENDDEVLSGSEEECSDTVSLR
>gid:15590  gyrA_2  DNA Gyrase Subunit A
MRDVSELFRTHFMHYASYVILERAIPHILDGLKPVQRRLLWTLFLMDDGK
MHKVANIAGRTMALHPHGDAPIVEALVVLANKGYLIDTQGNFGNPLTGDP
HAAARYIEARLSPLARETLFNTDLIAFHDSYDGREKEPDILPAKLPVLLL
HGVDGIAVGMTTKIFPHNFAELLKAQIAILNDKKFTVFPDFPSGGLMDPS
EYQDGLGSITLRASIDIINDKTLVVKQICPQSTTETLIRSIENAAKRGTI
KIDTIQDFSTDVPHIEIKLPKGSRAKEMLPLLFEHTECQVILYSKPTVIY
ENKPVECSISEILKLHTTALQGYLEKELLLLQEQLTLDHYHKTLEYIFIK
HKLYDSVREVLAINKKISADDLHQAVLHALEPWLHELATPVTKQDTSQLA
SLTIKKILCFNEEACTKELLAIEKKQAAIQKDLGRIKEVTVKYLKGLLER
HGHLGERKTQITNFKTAKTSILKQQTLI
>gid:15139  gyrB_1  DNA Gyrase Subunit B
MDPKEKNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSI
DEAMAGYCSRIDVRILEDGGIVIVDNGRGIPIEVHERESAKQGREVSALE
VVLTVLHAGGKFDKDSYKVSGGLHGVGVSCVNALSEKLVATVFKDKKCYQ
MEFSRGIPVTPLQYVSVSDRQGTEIVFYPDPKIFSTCTFDRSILMKRLRE
LAFLNRGITIVFEDDRDVSFDKVTFFYEGGIQSFVSYLNQNKESLFSEPI
YICGTRVGDDGEIEFEAALQWNSGYSELVYSYANNIPTRQGGTHLTGFST
ALTRVINTYIKAHNLAKNNKLALTGEDIREGLTAVISVKVPNPQFEGQTK
QKLGNSDVSSVAQQVVGEALTIFFEENPQIARMIVDKVFVAAQAREAAKK
ARELTLRKSALDSARLPGKLIDCLEKDPEKCEMYIVEGDSAGGSAKQGRD
RRFQAILPIRGKILNVEKARLQKIFQNQEIGTIIAALGCGIGADNFNLSK
LRYRRIIIMTDADVDGSHIRTLLLTFFYRHMTALIENECVYIAQPPLYKV
SKKKDFRYILSEKEMDSYLLMLGTNESSILFKSTERELRGEALESFINVI
LDVESFINTLEKKAIPFSEFLEMYKEGIGYPLYYLAPATGMQGGRYLYSD
EEKEEALAQEETHKFKIIELYKVAVFVDIQNQLKEYGLDISSYLIPQKNE
IVIGNEDSPSCNYSCYTLEEVINYLKNLGRKGIEIQRYKGLGEMNADQLW
DTTMNPEQRTLIHVSLKDAVEADHIFTMLMGEEVPPRREFIESHALSIRI
NNLDI
>gid:15589  gyrB_2  DNA Gyrase Subunit B
MAAYTEASILSLASLDHIRLRAGMYIGRLGNGSQKEDGIYTLFKEVVDNG
IDEFIMGHGKSLKISASDKQISIQDQGRGIPLGKLIDCVSKINTGAKYTQ
DVFHFSVGLNGVGLKAVNALSEIFSVRSVRKKKYHLATFHRGVLQESKQG
STKDPDGTFVSFTPDPSIFPEFTFNHDFLKDKIRQYTYLHSGLEIRFNDE
VFISHNGLKDLFDAEITEPPLYSPLFFQNEDLTFIFSHLEGNTERYFSFV
NGQETLDGGTHLTAFKEAIVKGVNEFFGKTFVSNDIREGIVGCIAIKIAS
PIFESQTKNKLGNTQIRSSLIKDVKEAIVQALRKDKVAPELLLEKIKFNE
KTRKNIQFIKQDLKSKQKKVHYKIPKLRDCKFHYNDRSLYGEASSIFLTE
GESASASILASRNPLTQAVFSLRGKPMNVFSLEETKMYKNDELFYLATAL
GITQNEIQHLRYNKVILATDADVDGMHIRNLLITFFLKTLLPLVENNHLF
ILETPLFKVRNKTTTLYYYSEQEKMQALQQFGKKDSSLEITRFKGLGEIS
PKEFAAFIGPEIRLTPVTITSLESISSILQFYMGKNTKERKQFIMDNLIT
DF
>gid:15278  himD  Integration Host Factor Alpha
MATMTKKKLISTISQDHKIHPNHVRTVIQNFLDKMTDALVKGDRLEFRDF
GVLQVVERKPKVGRNPKNAAVPIHIPARRAVKFTPGKRMKRLIETPNKHS
>gid:15775  mfd  Transcription-Repair Coupling
MAMDFNPVNLDFSISKEFKEETLPLLLENIHPGATAFLAAKMFHDCRASV
IMITTPARLDDLFENLRTFLDQAPVEFPSSEIDLSPKLVNIDAVGKRDHL
LYSLNQHRAPIFCVTTLKALLEKTRSPQATSQQHLDLAVGDVLDPEATTE
LCKSLGYSQVMLTSEKGEFSCRGGIVDIFPLSSPEPFRIEFWGEKIISIR
SYNPSDQLSTGKVSKISISPAYTEEASGGNYSHSLLDYFSTPPLYLFDNL
EILEDDFADISGTLSSLPDRFFSIGTLYDRISTSNQVYFSETPFPNVKNL
KENRVIIEAFHRNMEASRQAIPILYPEQIIQNDENPLLAFLQHLQEYMPP
HGKPLKLAIYSTKTKSLKEARALAETVARGDVEIYEKTGNLTSSFALVNE
AFAAISLSEFASTKVLRRQKQRTHFSVTTEEVFVPIPGETVVHIHNGIGK
FLGIEKKPNHLNIETDYLVLEYADKARLYVPSNQAYLISRYVGTSDKAAD
LHHLNSSKWKRSRDLTEKSLIVYAEKLLQLEAQRSTTPAFVYPPHGESVI
KFAETFPYEETPDQLKTIDQIYNDMMSPKLMDRLICGDAGFGKTEVIMRA
AVKAVCDGHRQVIVMVPTTILATQHYETFKERMAGLPIEIAVLSRFSQAK
VQKLICEQVASGQIDIIIGTHKLINKSLEFKNPGLLIIDEEQRFGVKVKD
NLKERYPMIDCLTVSATPIPRTLHMSLSGARDLSVIAMPPLDRLPVSTFV
MEHNTETLTAALRHELLRGGQAYVIHNRIESIYTLAETIRNLIPEARIGV
AHGQMGAEDLSNIFTKFKNQKTDILVATALIENGIDIPNANTILIDHADK
FGMADLYQMKGRVGRWNKKAYCYFLVPHLDRLSGPAAKRLAALNKQEYGG
GMKIALHDLEIRGAGNILGTDQSGHIGTIGFNLYCKLLKKAVSALKKHTS
PLLFNDDVKIEFPYNSRIPDTYIETGSMRIEFYQKIGNAESSEELTAIQE
EMRDRFGPLPQEICWLFALAEIRLFALQHGISSIKGTANALYVQKCLSKS
EQTKKTLPYALSPTPELLVKEVIESIERGFLINAS
>gid:15691  mutL  DNA Mismatch Repair
MSTRRPIQLLDPLTINQIAAGEVIENSVSVVKELIENSLDAGADEIEIET
LGGGQGAIIIRDNGCGFRAEDIPIALQRHATSKIREFSDIFSLNSFGFRG
EALPSIASISKMEIQSSIEGDEGVRTVIHGGDIVSCEPCARQLGTTVIVN
SLFYNVPVRRGFQKSMQSDRLGIRKLIENRILSTANIGWSWISEGHHEIQ
IAKQQGFQERVAYVMGDHFMQDALTIDKEANGVRIVGVLGSPSFHRPTRQ
GQKIFINDRPIESLFISKKVGDAYALLLPLHRYPVFVLKLYLPSSWCDFN
VHPQKIEARILKEELVGDCIKEAIVETLACPPGILCRTHQEIEESDSVPL
PMFRMLETSDVQEEESVEFDQNLFAYSSEDVSLEKQEYTSRGPKSQMDWI
YSSDVRFLTSLGRVVLAEDLEGVHIIFTAAARKHLFFLSLMQENSRMYQS
QALLIPLRLQVTPEEAFFFSHHGRTLCDLGIEISQVGPCVFSIESTPTVI
GEEELKEWLLLLAARGSTDINSEALTALMKETLTQATFSKHQHVFDVSWL
KLLWSVGKPEKGFDGARIRRLILDSDFMEG
>gid:15826  mutS  DNA Mismatch Repair
MTEKKPTPMMEQWHQCKEKAGDSVLLFRMGDFYEAFYDDAVLLSQHLELT
LTQRQGIPMSGIPVSTVDTYVDRLIGKGFKVAVAEQFGEPAKEKESKKIG
PMARDIQRFVTPGTLLSSTLLQEKFNNYIVAINRIGSLFGFACLDLSTGS
FFIEECENTKELVDEICRLAPSEVLSCNKFYNKETAIVMQLQQHLKLTLS
TYADWAFEHKFASQKLTTHFQVASLDGFGLKGLVPAINAAGGLLSYIQDK
LLLPTKHIAIPQTRGKQQKLLIDTASQVNLELLAPLNDPQGKNSLLRIMD
HTSTPMGGRLLRQILISPFYNPKEILVRQDAVEFFLRQVTLRKNIKTYLC
QVRDIERLMTKVTTGLAGPRDIGTLRDSFSAGAQIYEQLASATLPEFFID
KCSLDTKLASLIALLSKSLNGDLPLRVSDGNIFVDEFHNDLKRLRHNQEH
SQEWIWEYQERIRKETGIKKLKICFAQALGYYIEVSSEFAPQLPKDFIRR
QSRLHAERFTTIELQQFQDDMSNISEKLQTLETQFFKDLCSHILQLRTEI
LALSQSLADLDYIISLADLAHAQGYCRPHVDMSDTLCIYRGCHPVAKTLV
DTGKFIPNDTEMRGSQTRMILLTGPNMAGKSTYIRQIALLVIMAQMGSYI
PAKSAHIGVIDKIFTRIGAGDNLSKGMSTFMVEMAETANILHNATDRSLV
ILDEVGRGTSTYDGLAIAQAVVEYLLFTDKKKAKTLFATHYKELTTLEDH
CPHVENFHAGVKDKAGQPVFLYEILKGHSQKSFGIHVARLAGFPLCVVSR
AQQILRQLEGPESITRPAQDKMQQLTLF
>gid:15264  mutY  Adenine Glycosylase
MTKIAFSEKAKNFPVEALKKWFEKNKRSLPWRDNPTPYSVWVSEVMLQQT
RAEVVIDYFNQWMERFPTIESLAAAKEEDVIKLWEGLGYYSRARHLLEGA
RMVMEEFHGKIPDDAISLAQIRGVGPYTVHAILAFAFKRRAAAVDGNVLR
VLSRIFLIETSIDLESTRTWVSRIAQALLPHKSPEVIAEALIELGACICK
KVPQCHRCPVRQACGAWRENKQFVLPVRHARKKVIFLHRLVAIVLYDGSL
VVEKRRPKEMMAGLYEFPYIEVEPEEGLQDIEGFTKKMELSLESPLEFLG
NLKEQRHAFTNHKVHLCPIIFKATSLPQFGELHLLSDIDHLAFSSGHKKI
KDALLIYLGDVRSRESIGV
>gid:15607  nfo  Endonuclease IV
MKVLPPPSIPLLGAHTSTAGGLKNAIYEGRDIGASTVQIFTANQRQWQRR
ALKEEVIEDFKAALKETDLSYIMSHAGYLINPGAPDPVILEKSRIGIYQE
ILDCITLGISFVNFHPGAALKSSKEDCMNKIVSSFSQSAPLFDSSPPLVV
LLETTAGQGTLIGSNFEELGYLVQNLKNQIPIGVCVDTCHIFAAGYDITS
PQGWEDVLNEFDEYVGLSYLRAFHLNDSMFPLGANKDRHAPLGEGYIGKE
SFKFLMTDERTRKIPKYLETPGGPENWQKEIGELLKFSKNRDS
>gid:15716  nth  Enodnuclease III
MKQFILRTLNALFPNPKPSLEGWSSPFQLLIAILLSGNSTDKAVNSVTPQ
LFAKAPDAQSILDLPPGKLYQLIAPCGLGERKSAYIYQLSQILVRDFHGE
PPNDMALLTQLPGVGRKTASVFLGIAYGKPTFPVDTHILRLAQRWKISEK
KSPSAAEKDLARFFGHENTPKLHLQLIYYARQYCPALHHKIDNCPICSYL
AKEANSTRT
>gid:15479  polA  DNA Polymerase I
MKKLFVLDASGFIFRAYFALPEMKNHQGQATQAVFGFIRSLNKLIKEFSP
EYMISVFDGPNNKQSRQAIYADYKSNRQKKFEDIPPQIALVKEYCSLIGL
AYLEKESVEADDVIASIAKKAREENYKVYVCTADKDLLQLVNDHVVAWNP
WADQGVVGISEVIERYGIPPGNIPDYLALVGDSSDNIPGLPGCGPKKAAA
LLKQFGSVEGLLENLDAVKGLSQTMLSERQETLKLSKRLALLDSNIPIPV
PIESLTFPQHPVDEEKLIHFYIQQGFKTLVPSKQTEAATVDVQIIKDAES
LTNILNLVQGGDIAFAVAYTGNHLLSLKLEGLALTQGSGVFFIALEEEGT
KILPILKDFFLREDLTFYGYNLKRDCHALLNAGIVIREISYDLALAEHLT
NGGGKISFQSLLVNHGFTETAHRFAKEWGNSGLPIGRLPEQPEQYFGEFV
AYLPIIKDAILEEINRKNLNHILSDIEMPLEKVLFSMERAGVPLDVEELA
ILEALFETELAVLTEEIYDLSGRPFNIKSPKQLSDILYNELGLRPIDKAK
STRAEVLEALRSEHPIIEKLLAFRTIEKLLSTYVKALPKQVDSHTQRIHP
SFDQTGAVTGRLACRDPNLQNIPIRSERGILLRKAFRLSEKNSYFLSADY
SQIELRFLAHLSQDKSLKFAFESGEDIHAFTASQVFHVPLEQVSKEQRMQ
AKTVNFGIVYGQQAFGLAKVLKISIGEAQELIQAYFSRYPEIAHFVEETI
QQAAKDLRVTTMLGRERIIDSWNEFPGSRAASGRFAVNTRIQGSAAELIK
LAMLDISQAIKQQQMKSRMLLQIHDELLFEVPEEEIEEMQRLVREKMESA
MTLSVPIVVNILIGKNWAEC
>gid:15809  priA  Primosomal Protein N'
MGYIESSTFRLYAEVIVGSNINKVLDYGVPENLEHITKGTAVTISLRGGK
KVGVIYQIKTTTQCKKILPILGLSDSEIVLPQDLLDLLFWISQYYFAPLG
KTLKLFLPAISSNVIQPKQHYRVVLKQSKAKTKEILAKLEVLHPSQGAVL
KILLQHASPPGLSSLMETAKVSQSPIHSLEKLGILDIVDAAQLELQEDLL
TFFPPAPKDLHPEQQSAIDKIFSSLKTSQFHTHLLFGITGSGKTEIYLRA
TSEALKQGKSTILLVPEIALTVQTVSLFKARFGKDVGVLHHKLSDSDKSR
TWRQASEGSLRILIGPRSALFCPMKNLGLIIVDEEHDPAYKQTESPPCYH
ARDVAVMRGKLAHATVVLGSATPSLESYTNALSGKYVLSRLSSRAAAAHP
AKISLINMNLEREKSKTKILFSQPVLKKIAERLEVGEQVLIFFNRRGYHT
NVSCTVCKHTLKCPHCDMVLTFHKYANVLLCHLCNSSPKDLPQSCPKCLG
TMTLQYRGSGTEKIEKILQQIFPQIRTIRIDSDTTKFKGSHETLLRQFAT
GKADVLIGTQMIAKGMNFSAVTLAVILNGDSGLYIPDFRASEQVFQLITQ
VAGRSGRSHLPGEILIQSFLPDHPTIHSAMRQDYSAFYSQEITGRELCEY
PPFIRLIRCIFMGKCPKQTWEEAHRVHNILKEQLESTNPLMPVTPCGHFK
IKDTFRYQFLIKSAYVIPVNKKLHHALMLAKLSPKVKFMIDVDPMTTFF
>gid:15640  recA  RecA recombination protein
MNLPDRKKALEAAVAYIEKQFGAGSIMSLGRHSATHEISTIKTGALSLDL
ALGIHGVPKGRVIEIFGPESSGKTTLATHIVANAQKMGGVAAYIDAEHAL
DPSYASLIGVNIDDLMISQPDCGEDALSIAELLARSGAVDVIVIDSVAAL
VPKSELEGDIGDVHVGLQARMMSQALRKLTATLSRSQTCAVFINQIREKI
GVSFGNPETTTGGRALKFYSSIRLDIRRIGSIKGSDNSDIGNRIKVKVAK
NKLAPPFRIAEFDILFNEGISSAGCILDLAVEYNIIEKKGSWFNYQEKKL
GQGREFVREELKRNRKLFEEIEKRIYDVIAANKTPSVHANETPQEVPAQT
VEA
>gid:15613  recB  Exodeoxyribonuclease V, Beta
MKPFNIFDSNSSIQGKFFLEASAGTGKTFTIEQIVLRALIEGSLTHVEHA
LAITFTNASTNELKVRIKDNLAQTLRELKAVLNSQPASLPTYLDINCNVK
QIYMQVRNALATLDQMSLFTIHGFCNFVLEQYFPKTRLIHKNPALTHSQL
VLHHITNYLKQDLWKNVLFQEQFHLLAVRYNITSKHTSSLVDKLLASYTQ
PISSYFSSRVERLEQISLWHQQIYNSLLEIPKQVFLDQLTAHISGFKKQP
FSILDDLHHFVDLLYTSETHSSLFSFFKIAETFNFKHRLARYKPCAAFTV
LENMSWVERTLEFCNLDRIFNTLLVDLQEYLKQNYTPWLSPDESVFALEK
LLSSSEAQPVVQALREQYQLVLIDEFQDTDKQQWSIFSNLFISPKFTGSL
FLIGDPKQSIYEWRSADLPTYLTAKSSFSEDKQLQLVNNYRSTPKLMEAI
NQIFGKISPFLEIPGYLPIEYHALNPQSSETFENPPHAPIHFFFYETIKD
QALWIFSEALRLQKEQKIPLGNMVVLVSDSNQAFELISYATIPVSFSKNK
SIFHLTETHILTTALLEAILHPENYEKISKILFSSLFGLSLDEVTTKKED
FTIYFQSLHSYISHHGLLATFYRVMTTQGNVLFSSPRGDLIFQEMEKLCG
YLDTISSYPYHQLLHLKNFSETGRWEEELAISSYSEDLETLKITTIHSSK
GLEYDIVFCPGIEKSKKNKSSSELLREMYVACTRAKKQLYLPISTQPPSL
QRSSALTNYVKLEGTQSSAYDLAIHLHQEHPDLFSYSLPKDHGHATTVLN
LPLLETFALKVTPPKTIFSFSSTKFLLDTHKDSQSIPYSKLPISKQQLPL
GEKTGILIHKILESIQFSLLQDTEYLMSTIMRFIKHTHLEGFEETILKLL
SKTFFSPLTFSSQTFSLSQVLPNKIFRETSFLFLENQELWQGVIDLFFEH
EGKYYIIDWKTSFLGETNSDYSKSNLSIYIKQEKLDYQGRIYVKAVRKFL
NQFEIDDDVELGVIFIRGIDTQGNGFFALNSSEDIPNFNPKAIQKCQAYH
>gid:15612  recC  Exodeoxyribonuclease V, Gamma
MNATKHCRASFSNSPRHLLAQLAEDITSTHQKPFTKRWILVANATTGHWI
KNQLVHVLSDHIFMGSTIFTASDSIVKHLFLGSGCSQPNIPDYLTLPLLI
NNILEEISKASKFENGREFLSPPTYETTKKLAAAFKQFHTFSQRPTKNAS
HYQELFQILESHFSSYEEMFTTILNNRTQEEDCSLHIFGYAHLPKHLAEF
FINLSTYFPVYFYCFSPCREYFGDLLSDRAIDFFWNQLPDSPIKNAWEHY
VLSDRQALLANLAHKSQSSQNFFLDREIDYQEMFLPSKHDSSLGVIQNSI
LDLKPTSPQDFSQTKQTICIYRALNIPREVQEVFCKVTELLHRGVSPEEI
FILSSHIESYKVHLNAIFNPHVPIYFTDEVDPRAEDLRNKILLLSSILQT
QGDLHYILQLLTHPQLQQPIDQNKVPYLIKKLSSEWGKISSKDRASGQQM
KALGDLILEEYPFHQEGGRVSQVEVWETTVPLIYFIQERINLYLSSSQHS
YEDLFQNVFSCLEKIFVLSPEETSFITTLRNSLFPTFATSSCSLLFFTDF
CLDFLLHFHKPSPLYDKPGPYIGSLSSLSLIPKGYVFILGANKTTSSDIF
DLLNRTTTHEELAFSSTEDEENFHFLQILVSTKHELHISYISSAAQFNLP
SPFLNHIKETLDLPVETLPTQPYLSAFFKNKACLHTSQEYNYSLAHAFYS
KKALLPSLFIPTVKQVNLPQHLSLNEIIKGIFSPLDLFLKTNYNLRISYP
EHLKKQQKLFPTKHQIEDFWNECFVDKEHDLIPSISPHAEELFTYYREKT
ILLRNGLDKDPKHSPYTVTFSSSIFEERPYHESYLFPPLSLSFQGNPVQI
HGTIHGVCNEGLYLCSIDPRDSLKKTTRTLGSLPETSSEQKQLLERYVAL
AVLQMSQHLSSDSALIKLTSFNTKENHHPPFSDPEGYLRKVLEVYHLMSS
QPIPLLSPLCWKTLDDEEKFHQAVLSAISEEAKNPSLPIFWQFHNRNIEE
ILNHVGASERLKILSLFRGPCEAV
>gid:14980  recD_1  Exodeoxyribonuclease V (Alpha Subunit)
MEKICGYLEQILVENKDSGDITAYIKIPNKTTPILIKGKLPQPLELGSPI
QIYGVWSHSPSNTKYFQIHSYDSPLLYEYRGVFHYLTSKLIKGIGPKIAE
KIIEKFQEKTCYVLDITPERLSEVSGISETRCVSICKQLCEQKILRKTLL
FLQEYNIPIHYGVRIFKKYQEKSIEKICEDPFLLAREMEGIGFKTADFIA
MKLGVPRNSESRLCAGIQHSLEELQEEGHTCYPIELLIDVVAKLLNQDVF
DTPITLEEIDTQILNMQKRKLLHIQDISGTLHVWTRYLHLAEKTIVSDLK
RILFSSRRIRSIDGEKAIAWVEENLSIDLAEQQREAIKACFSEKLLIITG
GPGTGKSTITQAILKIFEQVTHKIILAAPTGKAAKRMTEITQKHSVTIHA
LLQYDFKTKSFRKNHDNPIDCDLIIVDESGMMDTHLLHHFLKALPDYTTL
VFIGDIHQLPSVGPGNILKDLITSNKMTVIRLNKIFRQVHDSGIVTNAHR
VNEGELPILYSETGRRDFLFFQKDDQEEALNHIIHLVTKFVPQKYHIYPQ
DIQVLAPMKKGTLGIYNLNKALKHALNPKKANLHGRFQSYAVGDKVMQIR
NNYNKEVFNGDIGYVSTINFEDKAVVVRMEGKHVGYSFSELDDLVLAYAT
SVHKYQGSESPCIIIPIHTSHFMMLYRNLLYTAITRGKKLVILVGTKKAI
AIATRNNRVQHRCTGLAEVLKELDTKKNYADL
>gid:15630  recD_2  Exodeoxyribonuclease V, Alpha
MHTEFAPFLEDLVHQQVISPLDIAFASKHISSDFEESFVFLAVSSALWRY
GHPFLSLEENRIRPSLGGISETDLYRGFHNLPKEARDKLFVVVSGRLYLR
SLYTIRSKLLDKLSLLCSATPNYFPPSIDSSILSEEQNFIFNKITQGCFS
IVSGGPGTGKTFLAAQLILSLVKQQPKLRIAIVSPTGKATSHIRQILMKY
NIFDDMVLMQTVHHFLQEYAYRRYNSIDVLLVDEGSMVTFDLLYSLVQTL
QGYEKDKKLYTSSLIILGDTNQLPPIGIGVGNPLQDLIGYFHENTFFLKT
SHRAKTGVVDQLTQSVLRGEMISFSPLPSISSAIEVLKNRFVKSLRQSEA
RLCVLTPMRHGPWGVLNLNTMIHQRLARSDPDLRIPIMVTSRYETWGLFN
GDTGLLCLKTQKLHFPQHEPIDSRALSQYVYNYVMSVHKSQGSEYDEVIV
IIPKGSEVFGVSILYTAITRAKYRVSVWGDPETLHKIIKKSNY
>gid:15427  recJ  ssDNA Exonuclease
MTNSDNASAAGLLWAHPKEDPAFLGMIIKEFHLPPTVAQIFISRGFQTIQ
EIHKFLYSHLSSLYDPGLFLDMSKAVERLLLARDRKEHVMIYGDSDVDGM
TGVALLVEFLRDIDVHVSYFFLGAILKQHGETSTLIAKLKEEGITLLITV
DCGITAGKEVSDITRQGIDVIITDHHMPTGKIPHCVATLNPKLRDHTYPN
RELTGVGVAFKLARGVLNALISRNLVPKSQGSLKKLLDLVTLGTITDVGV
LLGENRVMVRYGIKEIARGARPGLNKLCALCGVEKSEVTSTDIVLKIAPK
LNSLGRLDDPAKGVELLLTQDDERVDALIMELDNINRERQRIEAEVFQDV
QEILNSNPEILKQAAIVLSSTAWHARVIPIISARLAKTYNKPVVIIAIQR
GIGKGSARTIGSFPLLGVLKKCSSLLLSYGGHDFAAGVIMKEDKVEDFKK
KFVHLVNSSLKKGDTLPHLEIDAYADFDAIDYDLLASMELFEPFGKGNLM
PIFYSKVRQVRYPKVLPGNHLKLYLSQKERNLEGVAFGLGRHADALKASW
HYPLEIAYTPRLSQTSGSGVIHLLVRDFRISSEPRFSD
>gid:15163  recR  Recombination Protein
MTRYPDYLSKLIFFLRKLPGIGFKTAEKLAFELISWDSEQLKILGNAFHN
VASERSHCPLCFTLKESKEADCHFCREERDNQSLCIVASPKDVFFLERSK
VFKGRYHVLGSLLSPITGKHIENERLSILKSRIETLCPKEIILAIDATLE
GDATALFLKQELQHFSVNISRLALGLPIGLSFDYVDSGTLARAFSGRHSY
>gid:14976  rnhB_1  Ribonuclease HII
MNTSISEIQRFLSMIAFEKELVSEDFSVVAGIDEAGRGPLAGPVVASACI
LPKGKVFPGVNDSKKLSPKQRAQVRDALMQDPEVCFGIGVISVERIDQVN
ILEATKEAMLQAISSLPISPDILLVDGLYLPHDIPCKKIIQGDAKSASIA
AASILAKEHRDDLMLQLHRLYPEYGFDRHKGYGTSLHVEAIRRYGPSPCH
RKSFSPIKQMCAIV
>gid:15957  rnhB_2  Ribonuclease HII
MPPPFVVTLTTSAQNNLRDQLKEKNFIFSQPQNTVFQARSNTVTCTLYPS
GKLVIQGKGSEEFIEFFLEPEILHTFTHARVEQDLRPRLGVDESGKGDFF
GPLCIAAVYASNAEILKKLYENKVQDSKNLKDTKIASLARIIRSLCVCDV
IILYPEKYNELYGKFQNLNTLLAWAHATVINNLAPKPAGDVFAISDQFAA
SEYTLLKALQKKETDITLIQKPRAEQDVVVAAASILARDAFVQSIQKLEE
QYQVQLPKGAGFNVKAAGREIAKQRGKELLAKISKTHFKTFDEICSGK
>gid:15488  ruvA  Holliday Junction Helicase
MYDYIRGTLTYVHTGAIVIECQGIGYHIAITERWAIECIRALHQDFLVFT
HVIFRETEHLLYGFHSREERECFRILISFSGIGPKLALAILNALPLKVLC
SVVRSEDIRALASVSGIGKKTAEKLMVELKQKLPDLLPLDSRVETSQTHT
TSSCLEEGIQALAALGYSKIAAERMIAEAIKDLPEGSSLTDILPIALKKN
FSGVNKD
>gid:15252  ruvB  Holliday Junction Helicase
MTHQVAVLHQDKKFDVSLRPKGLEEFYGQHHLKERLDLFLCAALQRGEVP
GHCLFFGPPGLGKTSLAHIVAYTVGKGLVLASGPQLIKPSDLLGLLTSLQ
EGDVFFIDEIHRMGKVAEEYLYSAMEDFKVDITIDSGPGARSVRVDLAPF
TLVGATTRSGMLSEPLRARFAFSARLSYYSDQDLKEILVRSSHLLGIEAD
SSALLEIAKRSRGTPRLANHLLRWVRDFAQIREGNCINGDVAEKALAMLL
IDDWGLNEIDIKLLTTIIDYYQGGPVGIKTLSVAVGEDIKTLEDVYEPFL
ILKGFIKKTPRGRMVTQLAYDHLKRHAKNLLSLGEGQ
>gid:15489  ruvC  Crossover Junction Endonuclease
MSELIIGVDPGTIVAGYAIIAVEQRYQLRPYSYGAIRLSSDMPLPMRYKT
LFEQLSGVLDDTQPNAMVLETQFVNKNPQSTMKLAMARGIVLLAAAQRDI
LIFEYAPNVAKKAVVGKGHASKRQVQVMVSKILNVPEVLHPSNEDIADAF
ALAICHTHVARSPLCGVR
>gid:15248  ssb  SS DNA Binding Protein
MMFGHFAGYLGADPEERMTSKGKRVITLRLGVKTRVGMKDETVWCKCNIW
HNRYDKMLPYLKKGSGVIVAGDISVESYMSKDGSPQSSLVISVDSLKFSP
FGRNEGSRSPSLEDNHQQVGYESVSVGFEGEALDAEAIKDKDMYAGYGQE
QQYVCEDVPF
>gid:15651  ung  Uracil DNA Glycosylase
MQNATIDQLPVSWQEQLPLCWREQLKEEWSKPYMQQLLIFLKQEYKEHTV
YPEENCVFSALRSTPFDQVRVVILGQDPYPGKGQAHGLSFSVPEGQRLPP
SLINIFRELKTDLGIENHKGCLQSWANQGILLLNTVLTVRAGEPFSHAGK
GWELFTDAIVTKLIQERTHIIFVLWGAAARKKCELLFNSKHQHAVLSSPH
PSPLAAHRGFFGCSHFSKINYLLNKLNKPMINWKLP
>gid:14952  uvrA  Excinuclease ABC Subunit A
MKSLPVYVSGIKVRNLKNVSIHFNSEEIVLLTGVSGSGKSSIAFDTLYAA
GRKRYISTLPTFFATTITTLPNPKVEEIHGLSPTIAIKQNHFSHYSHATV
GSTTELFSHLALLFTLEGQARDPKTKEVLDLYSKEKVLSTIMELSEGVQI
SILAPLLRKDIAAIHEYAQQGFTKVRCNGTIHPIYSFLTSGIPEDCSVDI
VIDTLIKSENNIARLKVSLFTALEFGEGHCSVLSDEELMTFSTKQQIDDV
TYTPLTQQLFSPHALESRCSLCQGSGIFISIDNPLLIDENLSIKENCCSF
AGNCSSYLYHTIYQALADALNFNLETPWKDLSPEIQNIFLRGKNNLVLPV
RLFDQTLGKKNLTYKVWRGVLNDIGDKVRYTTKPSRYLSKGMSAHSCSLC
KGTGLGDYASVATWEGKTFTEFQQMSLNNWHVFFSKVKSPSLSIQEILQG
LKQRLSFLIDLGLGYLTPNRALATLSGGEQERTAIAKHLGGELFGITYIL
DEPSIGLHPQDTEKLIGVIKKLRDQGNTVILVEHEERMISLADRIIDIGP
GAGIFGGEVLFNGKPEDFLMNSSSLTAKYLRQELTIPIPESREAPTSWLL
LTEATIHNLKNLSIRLPLARLIGVTGVSGSGKSSLINNTLVPAIESFLKQ
ENPKNLHFEWGCIGRLIHITRDLPGRSQRSIPLTYIKAFDDIRELFASQP
RSLRQGLTKAHFSFNQPQGACIQCQGLGTMTISDDDTPIPCSECQGKRYH
SEVLEILYEGKNIADILDMTAYEAEKFFISHPKIHEKIHALCSLRLDYLP
LGRPLSTLSGGEIQRLKLAHELLFASPKQTLYVLDEPTTGLHTHDIQALI
EVLLSLTYLGHTVLVIEHNMHVVKVCDYVLELGPEGGDLGGYLLASCTPK
DLIQLNTPTAKALAPYIEGSLDIPVVKSEPPSSPKSCDILIKDAYQNNLK
HIDLALPRNSLIAIAGPGASGKHSLVFDILYASGNIAYAELFPPYIRQGL
LKETPLPSVGEVKGLSPVISVRKCSSSNRSYHTIASALGLSNGLEKLFAI
LGEPFSPLTEEKLSKTTPQTIIDSLLKSYKDDYVTITSPIPLGSDLEIFL
QEKQKEGFIKLYSEGNLYDLDERLPLNLIEPAIVIQHTKVSPKNSSSLLS
AISVAFSLSSEIWIYISQKKQRKLSYSLGWKDKKGRLYPEITHQLLSSDH
PEGRCLTCGGRGEILKISLEEHKEKIAHYTPLEFFSLFFPKSYMKPVQKL
LKDENASQPLKLLTTKEFLNFCRGSSEFPGMNALLMEQLDTESDSPLIKP
LLALTSCPACKGSGLNDYANYVRINNTSLLDIYQEDATFLESFLNTIGTD
DTRSIIQDLMNRLTFISKVGLSYITLGQRQDTLSDGENYRLHLAKKISIN
LTNIVYLFEEPLSGLHPQDLPTIVQLLKELVANNNTVIATDRSCSLIPHA
DHAIFLGPGSGPQGGFLMDSDTEVCPSVDLHANVPQTEVCPKAPLSISKA
NHTRGSDRTLKVNLSIHHIQNLKVSAPLHALVAIGGVSGSGKTSLLLEGF
KKQAELLIAKGTTTFSDLVVIDSHPIASSQRSDISTYFDIAPSLRAFYAS
LTQAKALNISSTMFSTNTKQGQCSDCQGLGYQWIDRAFYALEKRPCPTCS
GFRIQPLAQEVLYEGKHFGELLHTPIETVALRFPFIKKIQKPLKALLDIG
LGYLPIGQKLSSLSVSEKTALKTAYFLYQTPETPTLFLIDELFSSLDPIK
KQHLPEKLRSLINSGHSVIYIDHDVKLLKSADYLIEIGPGSGKQGGKLLF
SGSPKDIYASKDSLLKKYICNEELDS
>gid:15680  uvrB  Exinuclease ABC Subunit B
MTFQLHAPFAPCGDQPEAIARLSAGVRNQVKSQVLLGTTGSGKTFTIANV
VANVNLPTLVLAHNKTLAAQLYQEFREFFPNNAVEYFISYYDYYQPEAYI
ARSDTYIEKSLLINDEIDKLRLSATRSILERRDTLIVSSVSCIYGIGSPE
NYTSMALVLEVGKEYPRNILTAQLVKMHYQASPIPQRSAFRERGSVIDIF
PAYESELALRLEFLNDTLTSIEYSDPLTMIPKESVPSATLYPGSHYVIPE
AIREQAIRTIQEELEERMAFFDDRPIEKDRIFHRTTHDIEMIKEIGFCKG
IENYSRHFTGAPPGAPPTCLLDYFPEDFLLIIDESHQTLPQIRAMYRGDQ
SRKQSLVEYGFRLPSAFDNRPLTYEEAQKYFRKVIYVSATPGDTEVQESS
GHIVQQIIRPTGIPDPMPEIRPATGQVDDLLEEIRLRLSQKHEKILVISI
TKKLAEDMAGFLSELEIPAAYLHSGIETAERTQILTDLRSGVIDVLIGVN
LLREGLDLPEVSLVAILDADKEGFLRSTSSLIQFCGRAARNINGKVIFYA
DQKTRSIEETLRETERRRQIQLDYNKEHNIVPKPIIKAIFANPILQTSKD
SESPKESQRPLSKEDLEEQIKKYEALMQRAAKEFRFNEAAKYRDAMQACK
EQLLYLF
>gid:15825  uvrC  Excinuclease ABC, Subunit C
MRIEDFSLKLIPSSPGVYLMKDVHDQVLYIGKAKNLKNRLASYFHEKGDS
RERIPFLMKKTASIETIVVSNETEALLLENNLIKQHHPKYNVLLKDDKTF
FCLAISLSHSWPKVEAIRTKAITSSQRQLIFGPYVSAEACHTLLEVISQW
FPLRTCSDREFALRKRPCILYDMKRCLAPCVGYCTPEEYQGTLDKAILFL
KGKIEEVVKDLEKVIQKASDNLEFEQAANYYRTLSLIKQAMAKQQVEKFH
FQNIDALGLYRHKQRTILTLLTVRSGKLLGARHFSFFENAQEDQDLLSSF
ILQYYVSQPYIPKEILTPLPLEFPTLSYVLNAESPPRLRSPKTGYGKELL
DLAYRNAKAYAATTLPSSTLPYQDFQNILRMSQYPYRIECYDNAHMQGAH
ATGVYIVFENNGFDPKQYRTFSIDSEKTQNDLALLEEVLLRRFHSLTTAL
PDMIVVDGGKTHYNKTKKIIQTLNLTGIQVVTIAKEKSNHSRGLNKEKIF
CETFPEGFSLPPTSNLLQFFQILRDEAHRFAISKHRKKRGKALFEQEKIP
GIGEVKRKRLLQKFKSWKQVMLSSQEELEAIPGLTKKDIAVLLARQKDFN
KSD
>gid:15650  uvrD  DNA Helicase
MTCISELNEAQRKAVTAPLNPVLVLAGAGAGKTRVVTYRILHLINQGIAP
REILAVTFTNKAARELKERIVNQCASTNEFDVPMVCTFHSLGVFILRRSI
NLLNRENNFTIYDQSDAEKLIKHALQQHNLKPNLASKIQAHVSQAKNRLL
FPEDLDPNDYIDPVVSIYQEYQKKLIEANALDFDDLLFLTVRLLRESPEA
QELYNQLWKALLIDEYQDTNHAQYTLMQLLSKQHRNVFAVGDPDQSIYSW
RGANIHNILNFENDYPNAKVLCLEENYRSYGNILNAANALIKNNASRLEK
ELRSVKGPGEKIRLFLGSTDREEADFVAAEILQLHRVGNIKLRDICIFYR
TNSQSRTFEDALLRRRIPYEIIGGLSFYKRKEIQDILAFLRIFISKSDIV
AFDRTVNLPKRGIGSTTIFALTQYAIAQGLPILKACQQALDTKDVKLSKK
QQEGLQEYLALFPQIEHAYNTLSLRDFIESVVRITGYLEILKEDADTFKD
RKSNLEELYHKALESEQQNPKTHLELFLDDLALKGSDDDLNLTADRVNLM
TLHNGKGLEFRVSFLVGLEEQLLPHANSLGGTYENIEEERRLCYVGITRA
QDLLYLTAAQVRSLWGTVRMMKPSRFLKEIPKDYMIQVR
>gid:14877  xerC  Integrase/recombinase
MIASIYSFLDYLKMVKSASPHTLRNYCLDLNGLKIFLEERGNLAPSSPLQ
LATEKRKVSELPFSLFTKEHVRMYIAKLIENGKAKRTIKRCLSSIKSFAH
YCVIQKILLENPAETIHGPRLPKELPSPMTYAQVEVLMATPDISKYHGLR
DRCLMELFYSSGLRISEIVAVNKQDFDLSTHLIRIRGKGKKERIIPVTSN
AIQWIQIYLNHPDRKRLEKDPQAIFLNRFGRRISTRSIDRSFQEYLRRSG
LSGHITPHTIRHTIATHWLESGMDLKTIQALLGHSSLETTTVYTQVSVKL
KKQTHQEAHPHA
>gid:15913  xerD  Integrase/recombinase
MTMPSTQFHTTILEQFSLFLSVDRGLCQQSIAAYRQDISSFLTISAISSP
QDISQNSVYIFAEELYRRKEAETTLARRLIALKVFFLFLKDQQLLPYPPI
IEHPKIWKRLPSVLTPQEVDALLAVPLQMEKNPRHLAFRDTAILHTLYST
GVRVSELCDLRLGHVSDDCIRVTGKGSKTRLVPLGSRAREAIDAYLCPFR
DQYQKKNPHEDHLFLSTRGHKLERSCVWRRIHNYAKQVTSKPVSPHSLRH
AFATHLLDNKADLRVIQEMLGHARIASTEVYTHVAADSLIEKFLAHHPRN
L
>gid:15951  xseA  Exodoxyribonuclease VII
MSSPPQAVASLTERIKTLLESNFCQIIVKGELSNVSLQPSGHLYFGIKDS
QAFLNGAFFHFKSKYYDRKPKDGDAVIIHGKLAVYAPRGQYQIVAHALVY
AGEGDLLQKFEETKRRLTAEGYFATEKKKPLPFAPQCIGVITSPTGAVIQ
DILRVLSRRARNYKILVYPVTVQGNSAAHEISKAIEVMNAENLADVLIIA
RGGGSIEDLWAFNEEILVKAIHASTIPIVSAVGHETDYTLCDFASDVRAP
TPSAAAEIVCKSSEEQVQVFEGYLRHLLSHSRQLLTSKKQQLLPWRRFLD
RAEFYTTAQQQLDSIEIAIQKGVQGKIHESKQRYDNISRWLQGDLVSRMT
CRLQSLKKMLSQALSHKALSLQVRCHQLKKSLTYPRQIQQASQKLSPWRQ
QLDTLISRRLHYQKEEYFHKHTRLKHAHNVLEQQLRSHVQKLELLGRRLS
RGCELNLQNQKIAYANVKETLATILERRYENSVARYSALKEQLHSLNPKN
VLKRGYAMLFDFNENSAMISVDSLQENARVRIQLQDGEAILTVTNIEICK
LIKG
>gid:15666  yabD  PHP superfamily (urease/pyrimidinase) hydrolase
MDLADAHVHLSDDAFEEDINSVLQRAQDSGVSLVVNVTTTEKELNRSFAY
AERFPKIRFCHVGGTPPQDVDQDIEEDYRNFHAAAHSKKLAAIGEVGLDY
CFATEEGIARQKEVLQRYLALSLECELPLVVHCRGAFNDFFRMLDQYYHN
DPRSRPGMLHCFTGTLEEAQELISRGWFISISGIVTFKNAQDLRDLVVEL
PLEHLLIETDAPFLAPVPYRGKKNEPAHVLHTINAVANVKGMFPQELAAL
AYKNVLRFLHG
>gid:15099  yggF  YggF Family hypothetical protein
MSKPSSCKAYLGIDYGKKRIGLAYAAEPLLLTLPIGNIEAGKNLKLSAEA
LHKIILSRNITCVVLGNPLPMQKGLYSSLQEEVSLLAEELKKLSTVEIIL
WDERLSSVQAERMLKQDCGLSRKDRKGKTDSLAATLILTSFLDSLPKKLT
L
>gid:15472  yhhF  predicted Methylase
MRILAGKYKGKSLKTFSNPHIRPTSGLVKEAFFSICREDIEGAAFLDLFA
GMGAIGFEALSRGAASVVFVDISIKAIQLIHTNSALLGEQLPVVIFRQDA
QSAIQRLIKQKRSFDLIYIDPPYELCNCYVETLLQKIVSGNILNPEGTLF
LENASDEEIACEGLTLRRRRKLGKTYLAEYIVEKDP