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2024-05-03 06:24:30

Gene list

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COG category: Replication, recombination and repair
Organism: Thermus thermophilus HB27, HB27

Number of genes found: 122

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Thermus thermophilus HB27, HB27
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA TTC0784 uracil-DNA glycosylasechromosome CDS767637 660 + 0.719697
NA TTC0638 probable ATP-dependent DNA helicasechromosome CDS625498 2574 - 0.741259
NA TTC1075 excinuclease ABC subunit Achromosome CDS1043081 2859 + 0.682756
NA TTC0461 DNA polymerase III epsilon chain-like proteinchromosome CDS447153 1875 - 0.729067
NA TTC0258 hypothetical conserved proteinchromosome CDS248633 876 - 0.711187
NA TTC0206 hypothetical conserved proteinchromosome CDS192404 744 + 0.717742
NA TTC0005 hypothetical conserved proteinchromosome CDS3973 339 + 0.672566
NA TTC1509 putative DNA polymerase III subunitchromosome CDS1433281 807 - 0.742255
NA TT_P0186 hypothetical conserved proteinpTT27 CDS183597 288 + 0.631944
NA TTC1169 probable DNA-binding proteinchromosome CDS1135672 954 + 0.686583
NA TT_P0117 hypothetical conserved proteinpTT27 CDS109073 1188 + 0.704545
NA TT_P0191 putative helicase superfamily IpTT27 CDS187660 1656 + 0.730072
NA TTC1654 DNA-3-methyladenine glycosylase IIchromosome CDS1569179 558 - 0.725806
NA TTC0990 DNA gyrase subunit Achromosome CDS971723 2418 + 0.682796
NA TTC0985 hypothetical proteinchromosome CDS967412 843 - 0.739027
NA TTC0176 hypothetical proteinchromosome CDS159510 237 + 0.620253
NA TT_P0135 hypothetical conserved proteinpTT27 CDS137044 1152 + 0.645833
NA TTC1531 excinuclease ABC subunit Bchromosome CDS1452220 2007 - 0.666168
NA TTC0732 NAD-dependent DNA ligasechromosome CDS715856 2031 - 0.66519
NA TTC0610 DNA integration/recombination/invertion proteinchromosome CDS592188 942 - 0.701699
NA TT_P0205 probable DNA-binding proteinpTT27 CDS204207 333 - 0.663664
NA TT_P0196 hypothetical conserved proteinpTT27 CDS192879 978 - 0.638037
NA TT_P0101 hypothetical proteinpTT27 CDS92454 273 + 0.659341
NA TTC0366 uracil-DNA glycosylasechromosome CDS352109 618 - 0.666667
NA TT_P0120 hypothetical proteinpTT27 CDS111756 777 + 0.72973
NA TTC1535 A/G-specific adenine DNA glycosylasechromosome CDS1460265 978 - 0.718814
NA TT_P0104 hypothetical conserved proteinpTT27 CDS95616 726 + 0.662534
NA TTC0290 transposasechromosome CDS279959 516 - 0.676357
NA TT_P0126 hypothetical proteinpTT27 CDS117873 543 - 0.64825
NA TTC1478 yqgf-Family proteinchromosome CDS1400580 408 - 0.70098
NA TTC1876 DNA integration/recombination/invertion proteinchromosome CDS1778579 1179 - 0.696353
NA TTC1892 endonuclease IIIchromosome CDS1799785 663 + 0.701357
NA TTC1174 conserved hypothetical proteinchromosome CDS1141900 1587 - 0.646503
NA TTC1806 DNA polymerase III alpha subunitchromosome CDS1712094 6204 + 0.682463
NA TTC1588 DNA polymerase III holoenzyme tau subunitchromosome CDS1502604 1590 + 0.720755
NA TTC0577 probable transposasechromosome CDS561059 624 - 0.668269
NA TT_P0107 hypothetical proteinpTT27 CDS98388 1395 + 0.705376
NA TTC1222 DNA gyrase subunit Bchromosome CDS1184740 1923 + 0.672907
NA TT_P0197 hypothetical conserved proteinpTT27 CDS193847 585 - 0.664957
NA TTC1191 ribonuclease Hchromosome CDS1155420 501 + 0.690619
NA TT_P0136 hypothetical conserved proteinpTT27 CDS138185 351 + 0.660969
NA TTC1182 excinuclease ABC subunit Cchromosome CDS1148519 1893 + 0.696778
NA TTC0665 transposasechromosome CDS651891 1176 + 0.696429
NA TTC1161 putative DNA repair and genetic recombination proteinchromosome CDS1127602 1587 + 0.747952
NA TT_P0058 deoxyribodipyrimidine photolyasepTT27 CDS52504 1263 + 0.729216
NA TTC0160 ADP-ribose pyrophosphatasechromosome CDS142512 513 - 0.660819
NA TTC1523 ATPasechromosome CDS1444538 1266 + 0.71643
NA TT_P0208 hypothetical proteinpTT27 CDS205468 966 + 0.712215
NA TTC1859 bis(5'-nucleosyl)-tetraphosphatase(asymmetrical)chromosome CDS1764535 465 - 0.705376
NA TTC1005 serine protease-like proteinchromosome CDS984175 762 + 0.724409
NA TT_P0114 hypothetical proteinpTT27 CDS105710 411 - 0.720195
NA TT_P0119 hypothetical proteinpTT27 CDS111140 345 + 0.715942
NA TT_P0210 transposasepTT27 CDS207699 1629 - 0.677103
NA TTC0289 transposasechromosome CDS279441 624 - 0.666667
NA TTC1720 hypothetical conserved proteinchromosome CDS1636619 786 - 0.759542
NA TT_P0118 hypothetical conserved proteinpTT27 CDS110276 861 + 0.713124
NA TT_P0157 hypothetical proteinpTT27 CDS158973 234 - 0.666667
NA TTC0959 DNA mismatch repair enzyme (predicted ATPase)chromosome CDS937414 1638 - 0.730769
NA TT_P0154 hypothetical proteinpTT27 CDS156490 1587 - 0.638311
NA TTC0984 putative DNA binding proteinchromosome CDS967096 294 + 0.629252
NA TTC1880 hypothetical proteinchromosome CDS1786343 1233 + 0.515815
NA TT_P0116 hypothetical conserved proteinpTT27 CDS107991 1086 + 0.732044
NA TT_P0195 hypothetical conserved proteinpTT27 CDS192598 285 - 0.642105
NA TTC0922 hypothetical proteinchromosome CDS902448 2901 - 0.744571
NA TT_P0128 hypothetical proteinpTT27 CDS119270 4950 - 0.696566
NA TT_P0052 probable UV endonucleasepTT27 CDS47979 843 + 0.70344
NA TTC1157 putative methyltransferasechromosome CDS1123478 1008 - 0.742063
NA TT_P0215 hypothetical proteinpTT27 CDS213734 264 - 0.685606
NA TTC1519 bis(5'-nucleosyl)-tetraphosphatase(asymmetrical)chromosome CDS1442115 381 - 0.703412
NA TTC0559 methyltransferasechromosome CDS545110 558 + 0.72043
NA TTC1788 ribonuclease HIIchromosome CDS1695850 612 + 0.720588
NA TTC1942 primosomal protein N'chromosome CDS1849794 2112 + 0.732481
NA TTC0572 probable transposasechromosome CDS556245 624 + 0.668269
NA TTC1741 single-strand DNA binding protein (SSB)chromosome CDS1653827 792 + 0.69697
NA TTC0578 probable transposasechromosome CDS561577 516 - 0.682171
NA TTC0896 DNA primasechromosome CDS874715 1773 + 0.71348
NA TTC1230 serine/threonine protein kinasechromosome CDS1191943 1959 - 0.717713
NA TT_P0187 putative transposasepTT27 CDS183962 786 + 0.701018
NA TT_P0106 hypothetical proteinpTT27 CDS97223 1155 + 0.695238
NA TTC1895 heat resistant RNA dependent ATPasechromosome CDS1802867 1554 + 0.725225
NA TTC0445 hypothetical proteinchromosome CDS432592 1587 - 0.640832
NA TTC0982 endonuclease Vchromosome CDS965652 681 + 0.757709
NA TTC1584 putative CoA pyrophosphatase/phosphohydrolasechromosome CDS1500433 471 + 0.698514
NA TT_P0124 hypothetical proteinpTT27 CDS115800 381 - 0.748031
NA TTC0482 endonuclease IVchromosome CDS470956 813 - 0.719557
NA TT_P0199 hypothetical proteinpTT27 CDS195797 2301 + 0.648848
NA TTC0571 probable transposasechromosome CDS555835 516 + 0.682171
NA TT_P0213 transposasepTT27 CDS211680 954 + 0.686583
NA TT_P0100 probable transposasepTT27 CDS91589 516 - 0.682171
NA TTC1199 putative methylated-DNA-protein-cysteine methyltransferasechromosome CDS1162330 444 - 0.736486
NA TTC1609 DNA polymerase III, beta chainchromosome CDS1524642 1128 + 0.715426
NA TTC1220 modification methylasechromosome CDS1183034 1215 + 0.714403
NA TTC0533 transcription-repair coupling factorchromosome CDS514876 2937 + 0.695948
NA TTC0918 protein kinase-like proteinchromosome CDS897267 783 + 0.713921
NA TT_P0182 transposasepTT27 CDS180192 990 - 0.60303
NA TT_P0099 probable transposasepTT27 CDS91071 624 - 0.666667
NA TTC0664 hypothetical conserved proteinchromosome CDS651303 468 + 0.611111
NA TTC1931 DNA topoisomerase Ichromosome CDS1840330 2475 + 0.721616
NA TTC0041 methyltransferasechromosome CDS38022 927 + 0.660194
NA TTC1432 transposasechromosome CDS1356338 1158 - 0.602763
NA TTC1170 hypothetical proteinchromosome CDS1137482 225 - 0.657778
NA TTC0690 DNA polymerase Ichromosome CDS671122 2505 + 0.67984
comE TTC1602 competence protein/comEA-related proteinchromosome CDS1516644 228 + 0.719298
dnaA TTC1608 chromosomal replication initiator protein dnaAchromosome CDS1523000 1341 + 0.673378
dnaB TTC1106 dnaB replication fork helicasechromosome CDS1077043 1335 - 0.686142
dprA TTC1873 competence protein dprAchromosome CDS1775457 1005 - 0.723383
ecJ TTC0803 single-stranded DNA specific exonuclease RecJchromosome CDS782782 2001 + 0.728636
mutM TTC1454 formamidopyrimidine-DNA glycosylase mutMchromosome CDS1372708 804 + 0.746269
mutS TTC1282 DNA mismatch repair protein mutSchromosome CDS1235685 2235 - 0.703803
mutS TTC0960 DNA mismatch repair protein mutSchromosome CDS939048 2436 - 0.69376
mutT TTC1576 mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)chromosome CDS1495550 468 - 0.730769
mutT TTC0511 phosphohydrolase (mutT/nudix family protein)chromosome CDS495418 549 - 0.690346
recA TTC1466 recA proteinchromosome CDS1389891 1023 - 0.703812
recF TTC1721 recF proteinchromosome CDS1637362 1032 - 0.748062
recG TTC0902 DNA helicase recGchromosome CDS882252 2313 + 0.695633
recR TTC1236 recombination protein recRchromosome CDS1198960 585 + 0.733333
ruvA TTC1696 holliday junction DNA helicase ruvAchromosome CDS1609248 576 - 0.708333
ruvB TTC0038 holliday junction DNA helicase ruvBchromosome CDS35266 1011 - 0.69634
ruvC TTC0725 crossover junction endodeoxyribonuclease ruvCchromosome CDS710141 501 + 0.714571
sbcD TTC0923 putative exonuclease sbcDchromosome CDS905329 1119 - 0.722967
tatD TTC1084 sec-independent protein tatDchromosome CDS1053614 756 + 0.715608
uvrD TTC1062 DNA helicase uvrDchromosome CDS1031047 2079 - 0.713324