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2024-05-08 20:37:24

Gene list

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COG category: Replication, recombination and repair
Organism: Lactobacillus johnsonii NCC 533, NCC 533

Number of genes found: 130

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Lactobacillus johnsonii NCC 533, NCC 533
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LJ1170 topoisomerase IV subunit Bchromosome CDS1089612 1959 + 0.366003
NA LJ0270 probable RNA helicasechromosome CDS303542 1455 + 0.358763
NA LJ0843 COMF operon protein 1chromosome CDS739552 1188 + 0.330808
NA LJ1004 hypothetical proteinchromosome CDS904260 990 + 0.307071
NA LJ0622 transposasechromosome CDS1745031 1050 + 0.382857
NA LJ1751 hypothetical proteinchromosome CDS1639830 807 - 0.314746
NA LJ1240 DNA-damage-inducible protein Jchromosome CDS1166334 276 + 0.311594
NA LJ0004 DNA gyrase subunit Bchromosome CDS4229 1968 + 0.394309
NA LJ0471 DNA polymerase IVchromosome CDS515775 1122 + 0.36631
NA LJ0479 DNA mismatch repair protein MutSchromosome CDS523849 2367 + 0.365864
NA LJ0642 transposasechromosome CDS1719813 1050 - 0.382857
NA LJ0275 transposasechromosome CDS308537 1050 - 0.382857
NA LJ1160 hypothetical proteinchromosome CDS1080153 1263 + 0.361837
NA LJ1541 primosomal protein N'chromosome CDS1415060 2397 - 0.347101
NA LJ1198 probable endonuclease IIIchromosome CDS1124690 630 - 0.353968
NA LJ1219 hypothetical proteinchromosome CDS1153008 465 - 0.339785
NA LJ1039 hypothetical proteinchromosome CDS936757 375 - 0.328
NA LJ0468 Holliday junction DNA helicase RuvBchromosome CDS512694 1020 + 0.39902
NA LJ1726 transposasechromosome CDS1610727 1050 + 0.382857
NA LJ0697 3-methyladenine DNA glycosylasechromosome CDS586717 567 + 0.283951
NA LJ0989 hypothetical proteinchromosome CDS889455 2376 + 0.344697
NA LJ0649 hypothetical proteinchromosome CDS1713728 963 - 0.354102
NA LJ1082 integrase/recombinase XerDchromosome CDS986914 891 + 0.350168
NA LJ1203 hypothetical proteinchromosome CDS1130740 3615 - 0.333057
NA LJ1647 hypothetical proteinchromosome CDS1522050 1341 - 0.344519
NA LJ1230 hypothetical proteinchromosome CDS1160977 630 - 0.263492
NA LJ1056 hypothetical proteinchromosome CDS956224 1596 + 0.298246
NA LJ1692 hypothetical proteinchromosome CDS1567493 246 - 0.361789
NA LJ1150 excinuclease ATPase subunitchromosome CDS1068391 2523 + 0.370591
NA LJ1106 ribonuclease HIIchromosome CDS1011011 753 + 0.379814
NA LJ1646 primosomal protein DnaIchromosome CDS1521136 900 - 0.347778
NA LJ0007 single-strand binding proteinchromosome CDS9213 519 + 0.400771
NA LJ1174 ATP-dependent DNA helicase RecQchromosome CDS1096388 1797 + 0.33222
NA LJ0064 transposasechromosome CDS86234 1278 + 0.322379
NA LJ0476 hypothetical proteinchromosome CDS522460 432 + 0.384259
NA LJ0863 excinuclease ABC subunit Bchromosome CDS764997 2016 + 0.352183
NA LJ0322 Lj965 prophage putative minor tail proteinchromosome CDS353489 6066 + 0.381635
NA LJ0998 hypothetical proteinchromosome CDS899236 549 + 0.367942
NA LJ0252 methylated DNA-protein cysteine methyltransferasechromosome CDS282916 489 + 0.361963
NA LJ1549 exonuclease VII large subunitchromosome CDS1422460 1371 - 0.350839
NA LJ1110 probable integrase/recombinase CodVchromosome CDS1016225 924 + 0.353896
NA LJ0277 transcription-repair coupling factorchromosome CDS310370 3498 + 0.359348
NA LJ1092 DNA-binding protein HUchromosome CDS995481 276 + 0.423913
NA LJ1650 formamidopyrimidine-DNA glycosylasechromosome CDS1524460 831 - 0.361011
NA LJ0765 transposasechromosome CDS662960 1158 + 0.339378
NA LJ0466 DNA mismatch repair protein MutLchromosome CDS510189 1893 + 0.350766
NA LJ0883 uracil-DNA glycosylasechromosome CDS787736 696 + 0.357759
NA LJ0033 transposasechromosome CDS42139 1026 - 0.418129
NA LJ0420 hypothetical proteinchromosome CDS465795 822 + 0.311436
NA LJ1171 topoisomerase IV subunit Achromosome CDS1091587 2481 + 0.348247
NA LJ0288 Lj965 prophage integrasechromosome CDS327894 1176 - 0.317177
NA LJ1599 transposasechromosome CDS1473424 1278 + 0.322379
NA LJ1040 truncated transposasechromosome CDS937890 486 - 0.327161
NA LJ0811 hypothetical proteinchromosome CDS704851 1230 + 0.337398
NA LJ1107 SMF proteinchromosome CDS1011816 846 + 0.355792
NA LJ1306 transposasechromosome CDS1233280 1278 + 0.322379
NA LJ0911 hypothetical proteinchromosome CDS810585 1002 + 0.330339
NA LJ0949 hypothetical proteinchromosome CDS846398 1296 - 0.373457
NA LJ0372 transposasechromosome CDS404511 1050 + 0.382857
NA LJ1193 hypothetical proteinchromosome CDS1118745 1125 - 0.365333
NA LJ1440 Lj928 prophage portal proteinchromosome CDS1314777 456 - 0.315789
NA LJ0864 excinuclease ABC subunit Achromosome CDS767027 2868 + 0.358089
NA LJ1475 hypothetical proteinchromosome CDS1340756 2271 - 0.341259
NA LJ1548 exonuclease VII small subunitchromosome CDS1422234 246 - 0.341463
NA LJ1530 ATP-dependent DNA helicase RecGchromosome CDS1403323 2040 - 0.363235
NA LJ0886 hypothetical proteinchromosome CDS789977 534 - 0.372659
NA LJ0307 Lj965 prophage terminase small subunitchromosome CDS343363 855 + 0.367251
NA LJ0961 DNA repair protein RadCchromosome CDS862980 612 + 0.338235
NA LJ0445 hypothetical proteinchromosome CDS488764 453 + 0.333333
NA LJ1060 hypothetical proteinchromosome CDS961911 441 + 0.324263
NA LJ1545 DNA repair protein RecNchromosome CDS1418861 1680 - 0.33869
NA LJ0692 transposasechromosome CDS581866 1338 - 0.381166
NA LJ0236 hypothetical proteinchromosome CDS269849 822 + 0.36253
NA LJ0203 hypothetical proteinchromosome CDS235251 774 + 0.382429
NA LJ1421 Lj928 prophage proteinchromosome CDS1294097 222 - 0.351351
NA LJ0005 DNA gyrase subunit Achromosome CDS6207 2490 + 0.386345
NA LJ0982 hypothetical proteinchromosome CDS884212 291 + 0.309278
NA LJ1721 ATP-dependent DNA helicase PcrAchromosome CDS1605634 2247 - 0.368936
NA LJ0813 transposasechromosome CDS707627 1278 - 0.322379
NA LJ0036 exodeoxyribonucleasechromosome CDS45106 828 + 0.363527
NA LJ1318 DNA primasechromosome CDS1243920 1812 - 0.36479
NA LJ0092 methylated DNA-protein cysteine methyltransferase ribonuclease-like domainchromosome CDS113494 336 - 0.321429
NA LJ1749 hypothetical proteinchromosome CDS1637990 1203 - 0.303408
NA LJ1298 transposase fragmentchromosome CDS1227014 228 + 0.285088
NA LJ0609 exodeoxyribonuclease Achromosome CDS1768093 786 - 0.347328
NA LJ1199 hypothetical proteinchromosome CDS1125329 645 - 0.333333
NA LJ1292 hypothetical proteinchromosome CDS1222381 495 + 0.331313
NA LJ0926 hypothetical proteinchromosome CDS827713 441 + 0.310658
NA LJ1077 DNA polymerase III alpha subunitchromosome CDS979865 3117 + 0.351299
NA LJ1108 DNA topoisomerase Ichromosome CDS1012727 2082 + 0.372238
NA LJ0002 DNA polymerase III, beta chainchromosome CDS1546 1131 + 0.340407
NA LJ1220 hypothetical proteinchromosome CDS1153473 822 - 0.306569
NA LJ1510 hypothetical proteinchromosome CDS1381480 420 - 0.314286
NA LJ0425 recombination protein RecRchromosome CDS469941 600 + 0.406667
NA LJ0450 hypothetical proteinchromosome CDS492358 759 + 0.374177
NA LJ1492 DNA polymerase III alpha subunitchromosome CDS1360658 4299 - 0.358921
NA LJ1070 excinuclease ABC subunit Cchromosome CDS970341 1803 + 0.358846
NA LJ1720 NAD-dependent DNA ligasechromosome CDS1603589 2007 - 0.356751
NA LJ1465 Lj928 prophage integrasechromosome CDS1329202 1176 + 0.320578
NA LJ0003 DNA replication and repair protein RecFchromosome CDS3104 1125 + 0.329778
NA LJ0473 probable RNA helicasechromosome CDS517883 1386 + 0.362193
NA LJ0012 replicative DNA helicasechromosome CDS13598 1374 + 0.374818
NA LJ1270 hypothetical proteinchromosome CDS1198318 675 - 0.328889
NA LJ0001 chromosomal replication initiator protein DnaAchromosome CDS1 1365 + 0.3663
NA LJ0186 transposasechromosome CDS218844 1278 - 0.322379
NA LJ0088 3-methyladenine DNA glycosylasechromosome CDS111467 627 - 0.379585
NA LJ0423 DNA polymerase III subunit gamma/tauchromosome CDS467788 1809 + 0.368159
NA LJ1651 DNA polymerase Ichromosome CDS1525310 2661 - 0.337091
NA LJ1204 hypothetical proteinchromosome CDS1134355 3477 - 0.329882
NA LJ1055 hypothetical proteinchromosome CDS954498 1737 + 0.295337
NA LJ0693 transposasechromosome CDS583303 465 + 0.382796
NA LJ0839 RecA proteinchromosome CDS734670 1083 + 0.392428
NA LJ0981 ADP-ribose pyrophosphatasechromosome CDS883656 564 + 0.336879
NA LJ0298 Lj965 prophage proteinchromosome CDS335237 900 + 0.316667
NA LJ0091 methylated DNA-protein cysteine methyltransferase DNA binding domainchromosome CDS113298 237 - 0.362869
NA LJ1850 hypothetical proteinchromosome CDS1980275 1863 + 0.357488
NA LJ1321 DNA repair protein RecOchromosome CDS1249032 753 - 0.335989
NA LJ0204 hypothetical proteinchromosome CDS236008 564 + 0.351064
NA LJ0772 transposasechromosome CDS669262 1050 + 0.382857
NA LJ1676 hypothetical proteinchromosome CDS1549304 1224 - 0.30719
NA LJ1177 hypothetical proteinchromosome CDS1100907 1071 + 0.322129
NA LJ1001 hypothetical proteinchromosome CDS901340 684 + 0.330409
NA LJ0467 Holliday junction DNA helicase RuvAchromosome CDS512087 579 + 0.35924
NA LJ0429 hypothetical proteinchromosome CDS471861 858 + 0.356643
NA LJ1067 hypothetical proteinchromosome CDS967749 798 - 0.309524
NA LJ1202 hypothetical proteinchromosome CDS1127899 2817 - 0.347178
NA LJ1509 hypothetical proteinchromosome CDS1380858 639 - 0.338028
NA LJ0465 DNA mismatch repair protein MutSchromosome CDS507610 2574 + 0.384227
NA LJ0037 hypothetical proteinchromosome CDS46005 2841 + 0.345653
ISLjo4 chromosome repeat_region662960 1158 + 0.339378