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2024-04-30 07:42:44

Gene list

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COG category: Replication, recombination and repair
Organism: Haemophilus ducreyi 35000HP, 35000HP

Number of genes found: 112

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Haemophilus ducreyi 35000HP, 35000HP
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA HD1532 hypothetical proteinchromosome CDS1267912 963 - 0.460021
NA HD1413 conserved hypothetical proteinchromosome CDS1158472 600 + 0.358333
NA HD1920 hypothetical proteinchromosome CDS1614444 891 - 0.3367
NA HD0935 conserved hypothetical proteinchromosome CDS744962 1446 - 0.459889
NA HD1795 conserved hypothetical proteinchromosome CDS1503175 417 + 0.386091
NA HD0504 hypothetical proteinchromosome CDS388412 390 + 0.435897
NA HD0985 converved hypothetical proteinchromosome CDS780561 594 + 0.393939
NA HD1287 probable ATP-dependent helicasechromosome CDS1049843 1920 + 0.399479
NA HD0905 IstB homolog, C-terminal fragmentchromosome CDS725682 327 + 0.382263
NA HD1695 possible transposasechromosome CDS1412935 468 + 0.423077
NA HD0841 ADP compounds hydrolase, MutT/nudix familychromosome CDS669718 546 - 0.371795
NA HD1529 hypothetical proteinchromosome CDS1266101 1266 - 0.434439
NA HD1530 hypothetical proteinchromosome CDS1267353 579 - 0.457686
NA HD0897 integrase/recombinasechromosome CDS719286 855 - 0.320468
NA HD0945 conserved possible DNA repair proteinchromosome CDS751351 474 - 0.400844
NA HD0650 conserved hypothetical proteinchromosome CDS514212 360 - 0.355556
NA HD1616 possible transposasechromosome CDS1334298 1065 + 0.432864
NA HD0432 hypothetical proteinchromosome CDS340212 543 + 0.292818
NA HD1936 putative deoxyribonucleasechromosome CDS1625962 789 + 0.416984
NA HD0356 putative deoxyribonucleasechromosome CDS276603 801 - 0.399501
NA HD0291 possible transposasechromosome CDS223368 468 - 0.423077
NA HD1296 conserved hypothetical proteinchromosome CDS1057641 1341 + 0.41387
NA HD0506 hypothetical proteinchromosome CDS388850 279 + 0.340502
NA HD0570 putatuve TatD family deoxyribonucleasechromosome CDS438648 753 + 0.38911
NA HD0295 hypothetical proteinchromosome CDS227282 354 + 0.39548
NA HD1049 conserved hypothetical proteinchromosome CDS834976 744 + 0.372312
NA HD0802 conserved hypothetical proteinchromosome CDS635818 381 - 0.404199
NA HD0413 conserved DNA topoisomerase I-related proteinchromosome CDS327703 537 + 0.363128
InsA HD1971 insertion element IS1 1/2/3/5/6 protein InsAchromosome CDS1645790 276 - 0.528986
InsB HD1970 insertion element IS1 1/5/6 protein InsBchromosome CDS1645368 504 - 0.545635
dam HD0420 DNA adenine methylasechromosome CDS333655 837 - 0.360812
deaD HD1590 cold-shock DEAD box protein-Achromosome CDS1311864 1821 + 0.403624
dnaA HD0851 chromosomal replication initiator proteinchromosome CDS678427 1347 - 0.368968
dnaB1 HD0973 replicative DNA helicasechromosome CDS766159 1377 - 0.433551
dnaB2 HD1372 replicative DNA helicasechromosome CDS1120452 1437 + 0.388309
dnaE HD0551 DNA polymerase III alpha subunitchromosome CDS419178 3477 - 0.405522
dnaG HD0690 DNA primasechromosome CDS544816 1740 + 0.421839
dnaN HD0850 DNA polymerase III beta chainchromosome CDS677306 1104 - 0.391304
dnaQ HD0223 DNA polymerase III epsilon chainchromosome CDS161456 771 - 0.394293
dnaX HD1819 DNA polymerase III subunits gamma and tauchromosome CDS1524362 2064 + 0.380814
fis HD0449 DNA-binding proteinchromosome CDS355260 297 + 0.377104
gcr HD0678 site-specific recombinasechromosome CDS535390 1971 + 0.390665
gyrA HD1748 DNA gyrase subunit Achromosome CDS1458547 2703 - 0.409545
gyrB HD1643 DNA gyrase subunit Bchromosome CDS1362720 2433 - 0.382655
hepA HD1764 RNA polymerase associated proteinchromosome CDS1473426 2922 - 0.393224
holA HD1130 DNA polymerase III delta subunitchromosome CDS897099 1026 - 0.355751
holB HD1935 DNA polymerase III delta' subunitchromosome CDS1624937 987 + 0.381966
holC HD0667 DNA polymerase III chi subunitchromosome CDS527767 462 + 0.409091
holD HD0211 DNA polymerase III psi subunit proteinchromosome CDS152892 405 + 0.382716
hupA HD1004 DNA-binding protein HUchromosome CDS797905 273 + 0.395604
ihfA HD1482 integration host factor, alpha chainchromosome CDS1218059 297 - 0.390572
ihfB HD1353 integration host factor, beta subunitchromosome CDS1107771 282 + 0.368794
kdkA HD1101 3-deoxy-D-mannooctulosonic acid kinasechromosome CDS878056 729 - 0.374486
ligA HD0830 DNA ligasechromosome CDS659456 2061 - 0.414362
mfd HD0975 transcription repair coupling factorchromosome CDS768923 3483 - 0.38731
mutH HD0544 DNA mismatch repair proteinchromosome CDS413865 681 - 0.403818
mutL HD0743 DNA mismatch repair protein MutLchromosome CDS583842 1797 - 0.423484
mutM HD0710 formamidopyrimidine-DNA glycosylasechromosome CDS563452 825 + 0.403636
mutS HD2024 DNA mismatch repair protein MutSchromosome CDS1683966 2601 - 0.421376
mutT HD1786 mutator MutT proteinchromosome CDS1496301 399 - 0.388471
mutY HD2004 A/G-specific adenine glycosylasechromosome CDS1667582 1089 - 0.408632
nfo HD1062 endonuclease IVchromosome CDS844116 846 + 0.387707
nth HD1115 endonuclease III, DNA (apurinic or apyrimidinic site) lyasechromosome CDS888520 636 - 0.371069
ntpA HD0598 probable dATP pyrophosphohydrolasechromosome CDS458348 456 - 0.357456
nudH HD0172 (Di)nucleoside polyphosphate hydrolasechromosome CDS115108 594 + 0.410774
ogt HD1077 methylated-DNA--protein-cysteineS-methyltransferasechromosome CDS858836 558 - 0.403226
parC HD1587 topoisomerase IV subunit Achromosome CDS1305968 2247 - 0.384068
parE HD0870 DNA topoisomerase IV subunit Bchromosome CDS694332 1917 - 0.400626
polA HD1236 DNA polymerase Ichromosome CDS1001515 2889 + 0.386293
priA HD0623 primosomal protein N'chromosome CDS483603 2145 + 0.394406
priB HD1046 primosomal replication protein nchromosome CDS833673 375 + 0.336
radC HD0732 DNA repair proteinchromosome CDS576722 672 - 0.386905
rdgC HD0392 recombination associated proteinchromosome CDS310898 903 + 0.366556
recA HD0410 RecA proteinchromosome CDS325753 1119 + 0.393208
recB HD1076 exodeoxyribonuclease V, beta subunitchromosome CDS855164 3597 + 0.3603
recC HD0186 exodeoxyribonuclease V, gamma subunitchromosome CDS124536 3342 + 0.327648
recD HD0626 exodeoxyribonuclease V, alpha subunitchromosome CDS487021 1947 + 0.363636
recF HD0849 DNA replication and repair protein RecFchromosome CDS676162 1083 - 0.372115
recG HD1921 ATP-dependent DNA helicase RecGchromosome CDS1615543 2094 + 0.423591
recJ HD1342 single-stranded-DNA-specific exonuclease RecJchromosome CDS1098531 1722 + 0.391405
recN HD0815 DNA repair proteinchromosome CDS646402 1680 - 0.369643
recO HD1604 DNA repair protein RecOchromosome CDS1325435 723 - 0.387275
recQ HD0475 ATP-dependent DNA helicasechromosome CDS373282 1806 + 0.37763
recR HD0325 recombination DNA repair proteinchromosome CDS258535 606 - 0.40099
rep HD0571 ATP-dependent DNA helicasechromosome CDS439517 2019 - 0.367509
rnhA HD1206 ribonuclease Hchromosome CDS981501 462 + 0.354978
rnhB HD1026 ribonuclease HIIchromosome CDS816071 594 - 0.402357
rnt HD0611 ribonuclease Tchromosome CDS470479 645 + 0.392248
ruvA HD1758 Holliday junction DNA helicase RuvAchromosome CDS1469533 606 - 0.39604
ruvB HD1757 Holliday junction DNA helicase RuvBchromosome CDS1468473 1005 - 0.429851
ruvC HD0593 crossover junction endodeoxyribonucleasechromosome CDS456253 579 - 0.404145
sbcB HD1412 exonuclease Ichromosome CDS1156909 1542 + 0.373541
seqA HD1270 DNA replication inhibitor proteinchromosome CDS1030863 561 + 0.363636
smf HD1888 smf proteinchromosome CDS1586846 1143 - 0.392826
srmB HD0213 ATP-dependent RNA helicase proteinchromosome CDS153787 1329 + 0.410083
ssb HD1285 single stranded DNA binding proteinchromosome CDS1046317 531 - 0.423729
ssb2 HD0962 single-stranded DNA-binding proteinchromosome CDS760133 417 - 0.429257
tnpR HD0908 transposon gamma-delta resolvasechromosome CDS727649 585 + 0.369231
topA HD1385 DNA topoisomerase Ichromosome CDS1132309 2604 + 0.390553
topB1 HD0954 DNA topoisomerase IIIchromosome CDS755180 1512 - 0.433201
topB2 HD1276 DNA topoisomerase IIIchromosome CDS1038166 1920 + 0.394792
traC HD0917 probable DNA primasechromosome CDS732982 945 - 0.392593
ung HD1066 uracil-DNA glycosylasechromosome CDS846314 672 + 0.418155
uvrA HD1286 excinuclease ABC subunit Achromosome CDS1046994 2829 + 0.417462
uvrB HD1416 excinuclease ABC subunit Bchromosome CDS1159958 2028 + 0.386095
uvrC HD1812 excinuclease ABC, subunit Cchromosome CDS1518134 1839 - 0.378467
uvrD HD1032 DNA helicase IIchromosome CDS821593 2190 + 0.4
xerC HD1940 integrase/recombinase XerCchromosome CDS1628667 915 - 0.415301
xerD HD0013 integrase/recombinase XerDchromosome CDS16486 894 + 0.370246
xseB HD1323 exodeoxyribonuclease small subunitchromosome CDS1078211 225 - 0.395556
xthA HD1718 exodeoxyribonuclease IIIchromosome CDS1432567 804 + 0.374378
yfgE HD0785 conserved probable chromosomal replication initiator proteinchromosome CDS622394 711 + 0.320675