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2024-05-02 16:10:16

Gene list

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COG category: Replication, recombination and repair
Organism: Prochlorococcus marinus subsp. marinus str. CCMP1375, CCMP1375; SS120

Number of genes found: 87

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Prochlorococcus marinus subsp. marinus str. CCMP1375, CCMP1375; SS120
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Pro0867 Predicted endonucleasechromosome CDS790024 462 - 0.396104
NA Pro1056 Uncharacterized proteinchromosome CDS974080 351 + 0.378917
NA Pro0812 Predicted proteinchromosome CDS735265 510 - 0.360784
NA Pro0848 Uncharacterized membrane proteinchromosome CDS775100 300 - 0.386667
NA Pro0245 Mismatch repair ATPase (MutS family)chromosome CDS241674 2418 + 0.394955
NA Pro0883 Predicted proteinchromosome CDS803155 282 - 0.287234
NA Pro0722 Uncharacterized proteinchromosome CDS657874 378 - 0.277778
NA Pro0478 cyanobacteria-specific proteinchromosome CDS456362 519 + 0.396917
NA Pro1411 Uncharacterized proteinchromosome CDS1310635 321 - 0.34891
NA Pro0887 Zn-ribbon proteinchromosome CDS806335 204 + 0.313726
NA Pro1127 DNA helicase related to phage enzymechromosome CDS1055744 1440 - 0.370139
NA Pro0548 Uncharacterized proteinchromosome CDS522339 774 + 0.447028
NA Pro1274 DNA helicasechromosome CDS1174866 1935 + 0.320413
NA Pro1601 Uncharacterized membrane proteinchromosome CDS1458214 1101 - 0.409628
NA Pro0524 XisA-like site specific recombinase from phage integrase familychromosome CDS500108 1161 - 0.352283
NA Pro0113 Predicted proteinchromosome CDS119846 330 - 0.309091
NA Pro0279 Predicted endonucleasechromosome CDS273455 438 + 0.317352
NA Pro0344 Predicted proteinchromosome CDS331924 189 - 0.380952
NA Pro0065 Predicted N6-adenine-specific DNA methylasechromosome CDS75660 1149 + 0.332463
NA Pro1016 Uracil-DNA glycosylasechromosome CDS933636 609 - 0.348112
NA Pro0629 DNA helicase, predicted restriction/modification system component, ortholog of BS_yeeBchromosome CDS589776 2064 - 0.362888
NA Pro1555 Uncharacterized conserved proteinchromosome CDS1419086 297 - 0.377104
NA Pro1141 N6-adenine-specific methylasechromosome CDS1072868 603 + 0.331675
NA Pro0317 NUDIX/MutT family pyrophosphohydrolasechromosome CDS308737 561 - 0.4082
NA Pro0070 Uncharacterized conserved proteinchromosome CDS78441 381 + 0.404199
NA Pro1276 Predicted proteinchromosome CDS1177675 552 + 0.336957
NA Pro1621 Superfamily II RNA helicasechromosome CDS1474361 2778 - 0.396328
NA Pro0612 Retron-type reverse transcriptasechromosome CDS571900 1419 - 0.360113
alkB Pro0802 Alkylated DNA repair proteinchromosome CDS726553 564 + 0.320922
cpeT Pro0342 CpeT homologchromosome CDS330805 588 - 0.294218
dinG Pro1718 Rad3-related DNA helicasechromosome CDS1569396 1431 - 0.396925
dinP Pro0759 Nucleotidyltransferase/DNA polymerasechromosome CDS690057 1272 - 0.382075
dnaA Pro0567 ATPasechromosome CDS537957 1386 + 0.393939
dnaB Pro1835 Replicative DNA helicasechromosome CDS1692385 1416 + 0.388418
dnaE Pro0751 DNA polymerase III alpha subunitchromosome CDS681024 3507 + 0.356145
dnaG Pro0757 DNA primasechromosome CDS687410 2061 + 0.402232
dnaN Pro0001 DNA polymerase III beta subunitchromosome CDS174 1158 + 0.309154
dnaQ Pro0777 DNA polymerase III epsilon subunitchromosome CDS703846 711 + 0.412096
dnaX Pro1818 DNA polymerase III gamma/tau subunitchromosome CDS1675533 1680 + 0.335119
gyrA Pro0005 Type IIA topoisomerase, A subunit, ParCchromosome CDS5992 2487 - 0.315239
gyrA Pro1137 DNA gyrase A subunitchromosome CDS1067068 2628 - 0.378615
gyrB Pro1796 DNA gyrase B subunitchromosome CDS1647189 1977 - 0.368741
hepA Pro0047 Superfamily II DNA/RNA helicases, SNF2 familychromosome CDS46600 3189 - 0.368768
himA Pro1401 Bacterial nucleoid DNA-binding proteinchromosome CDS1300942 276 - 0.438406
holA Pro1807 DNA polymerase III delta subunitchromosome CDS1660814 1017 + 0.343166
holB Pro0151 ATPase involved in DNA replicationchromosome CDS151418 951 - 0.299685
lig Pro1841 NAD-dependent DNA ligasechromosome CDS1698178 2058 + 0.36103
mGS1 Pro0091 ATPasechromosome CDS102410 1341 + 0.389262
mfd Pro1000 Transcription-repair coupling factorchromosome CDS916759 3513 + 0.325648
mpg Pro0263 3-methyladenine DNA glycosylasechromosome CDS259376 663 - 0.371041
mutS Pro1805 Mismatch repair ATPasechromosome CDS1657339 2745 + 0.351184
mutY Pro1789 A/G-specific DNA glycosylasechromosome CDS1641463 1203 - 0.354115
nei Pro0370 Formamidopyrimidine-DNA glycosylasechromosome CDS358620 852 - 0.357981
nth Pro0880 Endonuclease IIIchromosome CDS800525 654 - 0.345566
polA Pro1234 DNA polymerase I 3'-5' exonuclease and polymerase domainschromosome CDS1136320 2958 + 0.375592
priA Pro0497 Primosomal protein N' (replication factor Y)-superfamily II helicasechromosome CDS473544 2259 + 0.419212
psb28 Pro0771 Photosystem II reaction centre W proteinchromosome CDS699968 354 - 0.384181
recA Pro1716 RecA recombinasechromosome CDS1567932 1140 + 0.421053
recB Pro1092 ATP-dependent exoDNAse beta subunitchromosome CDS1014658 3771 + 0.366216
recC Pro1090 Exonuclease V gamma subunitchromosome CDS1010770 3312 + 0.356884
recD Pro1093 ATP-dependent exoDNAse alpha subunitchromosome CDS1018431 1695 + 0.345723
recF Pro1728 Recombinational DNA repair ATPase (RecF pathway)chromosome CDS1579064 1068 - 0.404494
recG Pro0828 RecG-like helicasechromosome CDS750391 2526 + 0.35867
recJ Pro0984 Single-stranded DNA-specific exonucleasechromosome CDS901954 1881 + 0.320574
recN Pro1882 ATPasechromosome CDS1745611 1689 - 0.322084
recO Pro0395 Recombinational DNA repair protein RecOchromosome CDS379491 771 - 0.402075
recR Pro1098 Recombinational DNA repair proteinchromosome CDS1024995 510 + 0.378431
rnhA Pro0226 Ribonuclease HIchromosome CDS224331 498 - 0.385542
rnhB Pro1658 Ribonuclease HIIchromosome CDS1520802 576 + 0.385417
ruvA Pro0754 Holliday junction resolvasome DNA-binding subunitchromosome CDS685286 669 - 0.339312
ruvB Pro1775 Holliday junction resolvasome helicase subunitchromosome CDS1629988 1071 - 0.394958
ruvC Pro1147 Holliday junction resolvasome endonuclease subunitchromosome CDS1077035 468 + 0.384615
sbcC Pro0702 ATPasechromosome CDS642819 2715 - 0.353591
sbcD Pro0703 DNA repair exonucleasechromosome CDS645540 1185 - 0.4
srmB Pro1094 Superfamily II DNA/RNA helicasechromosome CDS1020284 1812 + 0.379139
ssb Pro0502 Single-stranded DNA-binding proteinchromosome CDS478656 459 - 0.418301
ssb Pro1784 Single-stranded DNA-binding proteinchromosome CDS1637412 390 + 0.348718
tatD Pro1641 Mg-dependent DNasechromosome CDS1499696 789 - 0.395437
topA Pro0432 Topoisomerase IAchromosome CDS414514 2619 + 0.39328
ubiC Pro1837 Predicted chorismate lyasechromosome CDS1695924 507 + 0.400394
uvrA Pro1881 Excinuclease ATPase subunitchromosome CDS1742609 2955 - 0.361083
uvrB Pro1809 Helicase subunit of the DNA excision repair complexchromosome CDS1663657 2034 - 0.343166
uvrC Pro0954 Nuclease subunit of the excinuclease complexchromosome CDS870346 1923 + 0.312533
uvrD Pro0335 Superfamily I DNA/RNA helicasechromosome CDS323818 2424 - 0.370875
xseA Pro0111 Exonuclease VII, large subunitchromosome CDS118373 1155 + 0.369697
xseB Pro0112 Exodeoxyribonuclease VII small subunitchromosome CDS119561 285 + 0.252632
xthA Pro0483 Exonuclease IIIchromosome CDS460386 831 - 0.371841