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2024-05-12 06:18:08

Gene list

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COG category: Replication, recombination and repair
Organism: Helicobacter hepaticus ATCC 51449, ATCC 51449

Number of genes found: 82

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Helicobacter hepaticus ATCC 51449, ATCC 51449
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA HH0793 Histone-like DNA-binding protein HU (HupB)SubName: Full=Histone-like DNA-binding protein HU (HupB); chromosome CDS768908 288 + 0.347222
NA HH0484 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS469382 879 + 0.368601
NA HH0797 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS772873 3060 + 0.336275
NA HH0257 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS254722 1338 - 0.304185
NA HH1419 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1360016 942 + 0.27707
NA HH0703 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS683552 249 + 0.321285
NA HH1358 DNA helicase IISubName: Full=DNA helicase II; chromosome CDS1313613 2115 + 0.353191
NA HH0799 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS779190 1320 + 0.269697
NA HH0341 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS335719 567 - 0.359788
NA HH1322 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1281447 798 + 0.37594
NA HH1096 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1066084 465 - 0.352688
NA HH0321 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS317822 1683 - 0.368984
NA HH1145 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1111580 357 + 0.32493
NA HH0260 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS257124 1791 - 0.292574
NA HH1025 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1002152 2511 + 0.3636
NA HH0750 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS733628 2253 + 0.42166
NA HH1640 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1565151 1236 - 0.368932
NA HH1445 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1394487 327 + 0.321101
NA HH0269 integraseSubName: Full=Integrase; chromosome CDS263405 846 - 0.371158
NA HH1663 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1591489 927 - 0.387271
NA HH1050 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1027876 1014 - 0.37574
NA HH0871 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS849434 663 - 0.368024
NA HH0287 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS280153 399 - 0.33584
NA HH0535 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS517329 1011 + 0.327399
NA HH0196 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS188600 690 + 0.313043
NA HH0769 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS745179 306 + 0.349673
NA HH1044 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1022471 759 - 0.393939
NA HH1244 adenine-specific DNA methylaseSubName: Full=Adenine-specific DNA methylase; chromosome CDS1209054 684 + 0.343567
NA HH0617 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS595982 435 + 0.328736
NA HH1365 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1320660 327 - 0.336391
NA HH1751 conserved hypothetical proteinRecName: Full=UPF0102 protein HH_1751; chromosome CDS1677044 333 + 0.342342
NA HH1038 type II R/M systemSubName: Full=Type II R/M system; EC=2.1.1.72; chromosome CDS1016511 1236 + 0.293689
NA HH1643 putative helicaseSubName: Full=Putative helicase; chromosome CDS1567835 2916 + 0.319959
NA HH0294 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS286290 2559 - 0.321219
NA HH0238 DNA adenine methylaseSubName: Full=DNA adenine methylase; EC=2.1.1.72; chromosome CDS228126 861 - 0.349593
NA HH1229 conserved hypothetical proteinRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS1195122 417 + 0.419664
NA HH0302 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS293312 933 - 0.336549
NA HH1235 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1200719 1026 - 0.331384
NA HH1553 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1488866 591 + 0.338409
NA HH0025 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS26504 2193 - 0.347013
NA HH0929 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS900423 630 + 0.344444
deaD HH1768 ATP-dependent RNA helicase DeaDSubName: Full=ATP-dependent RNA helicase DeaD; chromosome CDS1690505 1593 + 0.351538
dnaA HH1110 chromosomal replication initiator protein DnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS1080619 1371 - 0.316557
dnaB HH1658 replicative DNA helicaseSubName: Full=Replicative DNA helicase; chromosome CDS1585869 1464 + 0.362022
dnaE HH1270 DNA-dependent DNA polymerase IIISubName: Full=DNA-dependent DNA polymerase III; EC=2.7.7.7; chromosome CDS1231084 3657 - 0.366967
dnaG HH1199 DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS1166413 1560 - 0.364744
dnaN HH1126 DNA polymerase IIIRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1094815 1062 + 0.314501
dnaQ HH1347 DNA polymerase IIISubName: Full=DNA polymerase III; EC=2.7.7.7; chromosome CDS1302588 801 + 0.355805
dnaX HH1077 DNA polymerase III gamma and tau subunits DnaXSubName: Full=DNA polymerase III gamma and tau subunits DnaX; EC=2.7.7.7; chromosome CDS1048157 1596 - 0.379073
dprA HH1227 DNA processing protein DprASubName: Full=DNA processing protein DprA; chromosome CDS1193930 792 + 0.377525
gyrA HH1633 DNA gyraseRecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS1557237 2475 + 0.376162
gyrB HH1127 DNA gyrase (topoisomerase II)RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS1095901 2319 + 0.343251
holB HH0620 DNA poymerase III subunit delta'SubName: Full=DNA poymerase III subunit delta; EC=2.7.7.7; chromosome CDS598268 621 + 0.334944
lexA HH0928 exodeoxyribonuclease LexASubName: Full=Exodeoxyribonuclease LexA; EC=3.1.11.2; chromosome CDS899641 759 + 0.363636
lig HH1803 DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS1725150 1953 + 0.362519
magIII HH1787 3-methyladenine DNA glycosylaseRecName: Full=Endonuclease III; EC=4.2.99.18; chromosome CDS1709942 714 + 0.354342
mfd HH0458 transcription-repair coupling factorSubName: Full=Transcription-repair coupling factor; chromosome CDS438504 3006 - 0.355289
mutS HH0375 mismatch repair ATPase MutSRecName: Full=Endonuclease MutS2; EC=3.1.-.-; chromosome CDS366104 2223 + 0.367971
mutY HH1242 A/G-specific adenine glycosylaseSubName: Full=A/G-specific adenine glycosylase; EC=3.2.2.-; chromosome CDS1206415 1053 - 0.369421
nth HH1575 endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS1506171 693 + 0.340548
ogt HH1037 methylated DNA-protein cysteine methyltransferaseSubName: Full=Methylated DNA-protein cysteine methyltransferase; EC=2.1.1.63; chromosome CDS1015879 513 + 0.473684
polA HH1317 DNA polymerase ISubName: Full=DNA polymerase I; EC=2.7.7.7; chromosome CDS1275810 2739 + 0.366557
priA HH1551 primosomal protein N'SubName: Full=Primosomal protein N; chromosome CDS1486408 1914 + 0.375653
recA HH0633 RecA proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS611572 1038 - 0.398844
recG HH1156 ATP-dependent DNA recombinase RecGSubName: Full=ATP-dependent DNA recombinase RecG; chromosome CDS1120604 1887 - 0.36407
recJ HH1351 single-stranded DNA-specific exonucleaseSubName: Full=Single-stranded DNA-specific exonuclease; chromosome CDS1307193 1569 + 0.388783
recN HH1295 DNA repair protein RecNRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS1254904 1542 - 0.373541
recR HH1518 recombination protein RecRRecName: Full=Recombination protein RecR; chromosome CDS1457046 588 - 0.384354
rep HH0931 ATP-dependent DNA helicaseSubName: Full=ATP-dependent DNA helicase; chromosome CDS903972 2031 - 0.359921
rnhA HH0698 ribonuclease HISubName: Full=Ribonuclease HI; EC=3.1.26.4; chromosome CDS678422 447 + 0.360179
rnhB HH0006 ribonuclease HIIRecName: Full=Ribonuclease; EC=3.1.26.-; chromosome CDS6282 624 - 0.370192
ruvA HH0514 holliday junction DNA helicase RuvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS494637 591 - 0.345178
ruvB HH0506 holliday junction DNA helicase RuvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS488672 1011 - 0.409496
ruvC HH1111 holliday junction resolvase RuvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS1082089 558 + 0.351254
ssb HH0537 single-stranded DNA-binding proteinRecName: Full=Single-stranded DNA-binding protein; Short=SSB; chromosome CDS518865 513 + 0.389864
topA HH1798 DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS1718740 2250 + 0.369333
ung HH1249 uracil DNA glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS1212762 708 + 0.399718
uvrA HH0132 excinuclease ABC subunit ASubName: Full=Excinuclease ABC subunit A; chromosome CDS126488 2832 - 0.374294
uvrB HH1548 excinuclease ABCRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS1483878 1977 - 0.383915
uvrC HH0019 excinuclease ABC subunit CRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS18792 1866 + 0.346195
xerD HH1845 integrase/recombinase XerDSubName: Full=Integrase/recombinase XerD; chromosome CDS1765915 1089 + 0.345271
xseA HH1732 exonuclease VIIRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; chromosome CDS1656817 1254 + 0.373206