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# Enterococcus faecalis V583, V583

>EF2688 Snf2 family protein
MKWSIPERIVEQGREYMQEGRVLSIVQNPEKRIWLSEVLGEELYLVELDG
TAKEQDVCECQYWMEHGYCKHTVAVELALKQRGVSRIIQANQTVSFEKTN
RSTAEMFTKGFAKLSKASAEVPLQPLRLEFHLDVIETNNYYPELSTIGLS
LKIGLEGTKPKTYIVKNIGDFLQAYEKEMTFMVNKQHQFTLLHDSFSMEI
QEILTELAAIYHTSQLLGANGIQVKGKIDKRYLLLPIDRSQSLVEKMNRT
GQFILTNQTHKYRYLTFKETSLPLTFTVQKTEEQSFKLTIQNPITTFLAH
YHWAIADQTVYLLTEEQEAIYTTLLQLMKRLEEPSIIYEKETVSDLFSEV
LPLLEKIGRVSVEESVEELVVHHPLKAVFIFKKIKGRINARIDYHYGEVI
FSTNPKYAQLPEVNQEIVRDKAKETAIKQQFQQFAYQQTTTGFEKVLPAG
ESLYYFFKAEVPAFRQLGEVRMGRKLRELYLDAQHHQPTIEVAEGDSWLD
IRFDVTGIDETEIDAVLTSLLRNDAFYTLKSGEILAFDSEEFFHTSAILT
KLRKNMHQEDNVIHVPKNQGLMIESLLEDNERAHFSDSFKKMVTDLTHPE
NFEAQVPKTLQATLRHYQETGYKWLKMLSHYQFGGILADEMGLGKTLQTI
TYLLSEKEEERLKGTALIVAPASLTYNWLAEVKRFAPTLNVQVVSGNRQE
RAALLQNSTEDILITSYASMRQDVQLYQEMRVGYLILDEAQMVKNSGTKT
AQALKSLKVPQRFALSGTPIENNLDELWSIFQMILPGLFPGKKAFREIKP
EEIAKMIQPFILRRDKKTVLADLPEKIENNMYSVLTEEQKTVYLAYLKQM
QADVSQMDQATFKKNRMSILAGLTRLRQICCDPRLFIEDYTGGSGKVEQV
KDFLVAAKENNRRVLLFSQFTSMLSILEKELNELGLETFYLRGSTKPQDR
LTMANAFNEGEKDVFLISLKAGGTGLNLTGADTVILYDLWWNPAVEEQAA
GRAHRMGQKKVVEVWRMIAEGTVEEKMNSLQQEKRELFQKVIQGNEEQLA
KMTEEDIRTILSIGE
>EF0595 ISEf1, transposase
MNDFTTEIVQTLVTKGDLNELFRSHLEKAINTLLRTELTAFLDYEKYDRT
GFNSGNSRNGSYFRSIKTEYGELTLEIPRDRNGEFKQQTLPAYKRTNDTL
ETTIIHLFEKGVTMSEIADLIEKMYGHHYTPQTMSNMTKVLTEEVNAFKS
RALNDKYVAIFMDATYIPLKRQTVSKEAIYIAIGIREDGTKEVLSYAIAP
TESTYVWNELLQDINSRGVQEVLLFITDGLKGMKDTIHQIYPKAKYQHCC
IHVSRNIAHKVRVKDRKEICDDFKAVYQANSKEEANTFLSGMIEKWKKNY
PKVTQSLIENQDLLTFYDFPPSIRRTIYSTNLIESFNKQIKRYSRRKEQF
QNEESLERFLVSIFDTYNQKFLNRSHKGFQQVTDTLVSMFTE
>EF2114 adenine methyltransferase, putative
MDIKVQKTEDLIPYEKNPRHNEGAITAVAKSIEKFGFKVPIVVDASNVIV
NGHTRLKAAKYLGLKEVPTIIADDLTPEQIKAFRLADNKVGEIATWDEEL
LNAELDELADLDLDFDMTEFGFDLPDIEGEEVEVIEDEFEEELPAEPISK
LGDIYQLGRHRLMCGDSTNSLEVEKLMGNKKADLLITDPPYNVAYEGKGK
EALTIKNDSKETNEFHSFLYEAFSAAINNMKLGSSFYVWYASSEVVNFHT
ALEEAGFLVKQELIWNKNSMVLSRQDYHWKHEPCLYGWASGGSHSWYSDR
KQTTILNFDRPTVNKEHPTMKPVALFDYQIKNSSKQGDCILDLFGGSGTT
LIACEQNEREAYLMELDPRYVDVIIARWEAFTGEVAVKISGNDTAVVDGG
>EF2187 IS256, transposase
MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKE
YERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNE
KALMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNE
WQNRLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIG
FMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVS
WQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHD
YIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRR
EKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
>EF2409 DNA repair protein RecO, putative
MALGETKGIILFTKDFKEKDKLVKIFTESYGKLMFFVKGAHRKNNPLLPA
ILPFTEAVYIGNFREEGLSFLNSSKEVQPFRNIQQDIFINAYGTYILNLV
DAAIEDQHYDPNLFQFTHMALSALNEQKDPEIITNIFEIQLLERFGVRPE
WHHCVACGETQGKFDYSSKYSGVLCEKHWHLDEQRYHADPRAIHFIRLFS
QVSYEKVQNIQVKEETKKSIRETIDMLYDEYVGLHLKSKKFIDQMKTWEN
TLKIPPRKKEEK
>EF0841 conserved domain protein
MSVAHLLTVLENDEFIERIQKRPEAFIGTTGLVGLENLLVQTINGLLEFF
IEKNQGKIAIQLSRQQISFQVSSTRPLVFEQKQVDLEPPFLYLSVLQAFS
KQVGISIDQEKQRTIFIYHQGQLKKRLLLPIEETQERIEVLFWPDTQIFG
TESLSYMRVLQQCQQIAMLNPGLKILLTQEEEQKNLCYYPKGLSNYLFEK
DNPLTRKAAPIIQAKQTELALVQFILSKNHAPQVQKTFVNGHYPSLGGTH
YEGFLDGVVAAFNQFLEEQHYSLSVTADSFLAEFDFVLAITIPKPRYTDA
TKTILRNTELYEVVKEVVFDELQHYFQRHPKWLEQGRIEGNE
>EF_B0058 site-specific recombinase, resolvase family
MAKIGYARVSSVDQNLDRQLELLSQCDKIFTDKASGKDTNRDGFQEMMKF
IREDDIIVVTELKRLGRNNKELTETMNLIQLKKATLEVLNLPALTGITDD
NLRRLLNNLIIELYKYQAEEERRYIRETQQQGITLAKAKGKYKGGKPKYR
ENDPRLQLAFKLFLDGCTDKEVEQQTGINRRTFRRYRMKYGITNSLRHKN
D
>EF_B0026 conserved domain protein
MPMTHAQRQKVLEEIERKSIVDVAESLGITLVRQGQSYTWSEHDSFVLTP
KKNSFYWNSRQVGGGSIKLVQVIKECTHAEALQYLQTVEAGAIETLKEPT
PTNFHYYMKEHTQQNATIDYLLQERKLSRETIDFFFEQNLMAQSTYTDKE
TGQSEPVIVFKHVGLEEKIKGVALQGIWENKKLHGERGRLKRVWGNGYYG
LTVRVGYPPKIAEATSEKPIKIIVFEAPIDLMSYYELKKETIGDAVLFCA
NGLKKGAVSTLIANEIGSYVKEEEKPTVLEQLEKSKLTTEKVQLVLAVDN
DEAGKKFIQQFSNNWCPITLDQPKLIEGKSKTDWNDILKKTKNETKKKEA
KLKRQEAKKRSRERNKEMSEKTQMKQKSQPEITLEEIIKKKDYQKLSQHL
NDGIKEYLTSDTFKNYLDFASKFHKYSSKNIRLLLAQNPNIRRVAGYNAW
KKLDRQVKKGSKALYVYAPYFKDKVDKNGKKVTDENGEIVKETRYFLTPV
FDVEQTTGAELPQLVYNLEENLSDGKTFTRTYNALVEICPVPVTVTSIAS
GANGYYDPTKKEIVLQQHLGEVMTLKVLLHEMTHAMLHPDSQAIFGDDVY
SRQEFEAESVAYIVSRHLGLDTSSYSFGYLSSWTKQGEKLEEFTQSLETI
TKEARTLIEKADHALSIEKGIQLPQNKFEERLLNAKKKETEVGKSQANEQ
KRHQNEPKISAQIANPTRF
>EF2128 conserved hypothetical protein
MKTTIPITPKPQSRPRFARRGKYVQAYEDSTMKTYKQQVKNYLRRAKPKL
IEKGPIMAHVTFYVQAPKSALSNKQKRLDVKLERKYCDKKPDLDNYFKAV
TDAAEGILYKNDGQIAVIVCQKLYSLRPRTELEIMKLEVDS
>EF0330 SNF2 domain protein
MKATLHPYQEYSKNFILDHPYCALMLDMGLGKTLSSLTAIDELLHTFEII
ENVLVIAPLSVAEKTWTDEIEKWDHLQHLTFSKVLGNPKQREEALFKKAD
VYLINRENVEWLVNYYQRNWPFKTVIIDELSSFKSSSAKRFKALRKVRPK
MERVIGLTGTPSPNSLMDLWAQMYLLDQGERLGKTITQYRNKYFVPAQKN
GHIVYSWQLIPGAEEAIYNKISDICVSMKAKDYLRLPPRTENIIELDLNP
TSWKQYKELEREYVLELEGTDVVASNAATLSNKLLQLSNGAVYDENGDGR
EIHQEKLNALERVIEDAQGQSVLVFYQYQHDLERIQARFKQAKALNVSDG
DIEKWNEGKISLLLAHPQSAGHGLNLQKGGHIIVWFGLTWSLEFYQQANA
RLDRQGQTQPVIIHHLVTKGTIDEQVIKALQAKEQGQSALMAAVKAKIEE
YRGDKLG
>EF1417 site-specific recombinase, phage integrase family
MASIKSYKLKNGQERWEYFVSNGRSNGTGRQQKIHKRGFRSHKEALKAAK
IIEGQIASEEFVKENPQKMTISKFMNIWINEYKNNVKEGSRIVYRDAIRM
YIDPYIGNYQLNKYKPADHQKFINSLFTNKELGKSKNGLSYNTVKIVNAA
LSNAFKKAQKLGYIKSNPTYFVEFPLDKVKEKTNKEKKLEFYTLEQENLF
LDTARNFDDFMWYVFFLIIFDLGLRKGEVMALRWFNFDFRDNILTFDKQR
LYRKEQPGQVILDDVKTDAGKRSLKMTNRVRNSVLELYSINYDLTSNVLP
MTNSNQDFLFINHRGKNVGLPIRQRSVDTAWHRIIQKANLPKIRIHDGRH
TNAARLRQAGVPLEDIKDMLGHKNVKTTEIYAHVSPEVKERAVNKLELYQ
MQHKKSGN
>EF0512 DNA-damage-inducible protein J, putative
MATTKKKPIHVNVDENLKEEAEQLFDDLGLNMTSAITIFLKQSINEQAIP
FMINKGNKETLQALKDIKEGNVHGGFSSVEDLMEDLNA
>EF_B0052 IS256, transposase
MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKE
YERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNE
KALMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNE
WQNRLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIG
FMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVS
WQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHD
YIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRR
EKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
>EF1152 conserved hypothetical protein
MTKEKTFKLVATAASGLEALVGKELRDLGIPCEVENGRAVFEGTVETIAT
ANLWLRTADRIKIVVGEFNAYSFDELFEKVKALPWEDYLPLDAEFPVAGK
SIKSKLYSVPDCQAITKKAIVNRLREVYHRPATVPLTETGALFKLEVALL
KDKVTLTLDTTGPSLFKRGYRIEKGGAPLKENMAAALVMLTNWRKDRPFY
DPVCGSGTICIEAALIGHNIAPGFNRSFTCETWDWVDPAIFEKVRNEAEA
KADYDVELDICGSDVDGRMIEVARANAEEVGLGDSITFKQLALKDFTTEK
EYGVMVANPPYGERLGEEESVRRLYKEMGHVFRPLTTWSKYILTSDLAFE
EYYGAKATKKRKLYNGALRTDLFQYWGTRPPRKPRED
>EF_A0062 IS256, transposase
MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKE
YERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNE
KALMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNE
WQNRLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIG
FMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVS
WQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHD
YIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRR
EKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
>EF2974 MutS2 family protein
MVCLESDTCQSSQLLNTSFKRGFFSNLYPMIKRTAVERCPLFSVETGFYL
KAPGILFVIERKKKQMNHETIQKLQFTTILKEVQTRAIGEYSKERLAKMV
PATRLETVQSRLTETTEARLIIDSGQHVPFMGLSQITRLLQQVKKGLILT
PNELIEVADFLRSSQRIQKFFEKNQYQTPRLFSYSQHLADFRAIEEQIYT
KIHNQKVATDASRQLRKIRRQINECQQEIETKVTKFLRNKNNQLYIQENM
MVKKGEHYTVPIKASYKNKVSGTIIEQSNKGQTVFIEPVAISKLNEQLTL
LKAEETAEEYQILAELTGLINEQERLVDQAVDTMTTLDIIFARGKYSREI
GGITPKVNKEERLRIVQGKHPLLLEHAVPLTFSLGAEYRGLVITGANAGG
KTVVLKTVGLLTVMTQFGLQIPAQAGTEIPVLDEIFVDIGDQQNLENALS
TFSGHMKNIAEMLRNVKRHTLVLLDEIGSGTEPNEGAGLAIAIMETMYQK
GALVVATTHYGEIKRFAQEHDDFVPAAMAFDRETLTPKYQLKIGEVGDSQ
ALWIARKMKMEPQLIEKAAHYIQRKEYPTNRSLFKPLKAKETTFATFVEE
THRYQKGDRVLLTETQQIGLVFTDEGEQEIQVFVNDKIENVPRRRLKLQA
KAQDLYPQDYDLESLFTDFHERKKLKDIERGSKKAQKQLRKEAEKRAARR
DK
>EF2452 methylase, putative
MRVISGEYGGRRLKALDGDNTRPTTDKVKESIFNMIGPYFDGGMALDLYS
GSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDA
NRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCE
TDKTVKLPETIGTLKKTRETVYGITQVTIYRQEA
>EF0479 site-specific recombinase, phage integrase family
MKLRANIIEKRGTLQVIVSYKDSNGKIRQKWKDTKLKKKGNKKRAEKIRD
EFLLELESQLAMECECANPDLLFYDYLLNYLEVSKKQVAFNTYVGYKHYV
HNRIYKFFYPKKIKLNRLKPYHLQDFYQYMLNDDCTANTVIHYHAFIRKA
LQEAVITELISTNVADKVRKPKKKQFVSQVYNQHEILKLLDILSEEKLYL
VVLLTAFYGLRRSEVLGLKWSAIDFLNKKIMINHVIIENPENMSQLIKKD
QTKNSSSYRTLPLVETIERALVNQAKWQQDNRILLGEDYILKDSEYVFTM
EDGRLMKPQYVTHRLSKLIKKNGLKKIRFHDLRHSNASIMLDSGQNMKSI
QEWLGHASYSTTANLYTHLTAGVKERAAEALENAFGFKE
>EF1648 site-specific recombinase, phage integrase family
MEEKNWPELFARYLIVERGYSEKTKKAYQEDIQHFFSFLKTSGNDNYLTV
EHLDVRAYLSELYDQEYSRNSISRKIASLRSFYQFLLKNEAIQENPFSYV
HMKKKQLRLPRFFYEKEMDALFESAQGEQPLDLRNQALLEVLYGTGIRVS
ECANLTVDAVDFQASVLLVHGKGNKDRYVPFGSFAQDALKDYLENGRALL
MTKYQKKHPYVFVNHHGEQITPTGIEYVLNQLIKKSSLNAEIHPHMLRHT
FATHLLNNGADMRTVQELLGHANLSTTQIYAHVTKESLQKNYRTFHPRA
>EF2378 DNA polymerase III, alpha subunit, Gram-positive type
MTEKARDLFDKLMTQIQLDDTAKEHPLIQNGRIDKVIVHQQSRLWEFHLS
FDELMPVMLYQTFMQQLELAFQQIAQVSVQITTNQTTFTEEQLTDYWQLA
LLNSQCNTPLVQKVLKTQTPQFEDRKIILPVDNEAVIPYLKQQYLPIIEE
LYFSYGFPKFHIEPKMDQQQAAEVLKKFEEQKLEQAAAFQQQAAESLVKH
EQMKKEKQQQAPAFDGPIRLGRNIPNDEPIMPMGNILEEERRITIEGFIF
DKEVRELRSKRKILILKITDYTSSFVVKKFSNGEKDEQVFDAIQPQSWIR
VRGSVQEDTFMRDLVMNAQDLMEVAHAPRKDYAPEGEKRVELHMHSNMST
MDATNKVGDLVAQAGKWGHKAIAITDHGGAQAFPDAHAAGKKAGVKILYG
VEANIVDDGVPIAYNEEHIELTDATYVVFDVETTGLSAVYDTIIELAAVK
MHKGNVIETFEQFIDPGHPLSQTTINLTGITDEMVRGSKSEEEVLRMFKE
FSEGTILVAHNASFDMGFLNTSYGKHGIPEAANPVIDTLELSRFLYPHFK
SHRLNTLSKKFGVNLEQHHRAIYDSESTGHLCWIFLKEAKENHDMHFHDD
LNRHIGEGDSYKRARPFHATILATTQAGLKNLFKLISMSNVDYFFRVPRI
PRSQLSKLREGLLIGSACSNGEIFEAMMQKGVEEAKNRAKFYDYIEVMPK
PVYAPLIEQELVKNEADLEEIISNLVKIGDELGKLVVATGNVHYLNEEDA
IYRKILVGSMGGANPLNRHSLPKVHFRTTDEMLTEFQFLGQDIAKRIVVE
NPNKVADLCEEVIPVKDDLYTPKIPGSEQEITDLSYNRARELYGDPLPEI
VEKRLEKELNSINGNGFSVIYLISQKLVHKSNEDGYLVGSRGSVGSSFVA
TMTGITEVNPLAPHYYCPECQYSEFYEDGSYGSGFDMPEKACPKCGARLF
KDGHDIPFETFLGFHGDKVPDIDLNFSGDYQAEAHNYTKVLFGEEYVYRA
GTIGTVADKTAYGFVKGYERDHNLHLRGAEIDRLAKGSTGVKRTTGQHPG
GIIVIPDYMDVYDFTPIQYPADDQEAEWKTTHFDFHSIHDNILKLDILGH
DDPTVIRMLQDLSGIEPKTIPTDDPEVMRIFEGPDVLGVDAEQIYSKTGT
LGIPEFGTRFVRGMLEQTHPSTFAELLQISGLSHGTDVWLGNAEELIRRG
EANLAEVIGCRDDIMVYLIHAGLDSGMAFKIMETVRKGQWNKIPDELRDT
YLNAMKENNVPDWYIDSCSKIKYMFPKAHAAAYVLMALRVAYFKVYFPIL
YYCAFFSVRADDFDLVAMSQGKEAVKARMKEITDKGMDASTKEKNLLTVL
ELCNEMLERGYKFGMIDLYKSDAENFVIEGDTLIAPFRAVPSLGLNVAKA
IVAAREEQPFLSKEDLATRGKVSKTLIEYMNENGVLKDLPDENQLSLFDM
L
>EF2344 hypothetical protein
MKSMEIDVEHIFDCLDRYGKGELTEKQLTKGVTDDEKMFLIMHQGLLGGN
TDSEEEFNVLDWLGEEESFFMIVEINENLCRKAESILEEIGVEMPDVIES
FLKQLVETKQLPVVVND
>EF1855 transposase, IS256 family
MARKKRNPDAEKLAESILNAYQPESVDDMQDALKDVFGPLFEKMLQGELN
NHLGYDAHSKEPKEHDNRRNGYGTKTLKTSFGEVAIDVPRDREASFEPEL
IPKRKRDVSDIEGKVLSMYARGMSQRDIAATVEAIYGFDISHEMISDITD
AVLPELEEWQARPLAKCYAFLFVDCMYVTLRENYEAKEYAVYTILGYDLK
GNKEILGLWLNQTESKNRWMQVFDELKARGVEDVFFISMDGVSGLEEGAK
AIFPSVIVQRCIVHLVRNALRYIPSKDYKEVCRDMKKFYGASSLNAAHAA
FGSFQNRWSHYSGAVDVWKRNFAHVEQLFDYGSAIRKIMYTTNAVESVHS
SFRKVTKKGAFSNENALLKLLYLRTKELHAKWSGGRIQNWAMVLKQLMIN
ETFSSRMKSMRFTFRNNGRFIQLCVRSKFI
>EF_A0059 IS256, transposase
MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKE
YERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNE
KALMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNE
WQNRLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIG
FMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVS
WQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHD
YIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRR
EKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
>EF1874 transposase, IS256 family
MNDFTTEILKTLANKGDLNELFRVHLEKAVNTLLKTELTAFLDYEKYDRI
GFNTGNSRNGSYDRTVKTEYGELHLQIPRDRNGEFKQQTVPAYRRTNDTL
EETVIHLFRKGITMSEIADLIEKMYGHHYTPQTMSNITKSFTEEVTAFKG
RELHDRYAAIYMDATYIPLKRKTVAKEAIHIAVGIRPDGSKEVLSYAIAP
TESITIWEEILLDLQERGLKNVLLFITDGLKGMVGAISRFYPKARFQHCC
VHVSRNISHKVRVDDRKEVCDDFKMVYQTSSKKVALEARGAFAEKWKTSY
PKVVESILSNDHLLTFYDFPLAIRKSIYSTNLIESFNKQIKKYSHRKEQF
QNEESMERFLVSSFDTYNQKFLGRSHKGFQQAEGELEQMLSQLIEN
>EF0882 replication initiation and membrane attachment protein DnaB, putative
MKGNRQRIQPKNIFQAVIDSPLSDQEKEVLTFLYQPIVGANAFSLYWLLL
SETTDSEENGSLFHADLISLLDLSCQQLEEACYKLEGIGLLETYKKTDRE
LGDCYLYYLKAPETAARFFKDEVLALVLFNRVGQRKFDQLVQKFQPHPTK
TEGYQNVSASFQEVYAFKEEQIVSEANRLTTIQETFSQKEKSKKISVSTD
SFDWHYFVEGLHRLGLQLPEDEASFQEEVYVFHQLYGINELDMVDFASKS
FDYYTSRILPKELVRTIHQAFDPDKKPQSTNVVTNKQAQLTVEEQQTYRY
NALKMNGFSELDIQMIMDSEKNPPIQYLEALKNSRGGYTTPQERSLVKYL
VAKSGLPTSVINILINYVYNIQQQPTLKAEYVNRIANEWGQSGIHSPEKA
IEHVRELAKQSQTKQKQRQQNYSGKRQTVRQERLPEWADQPNDETKLSPE
EQAELDRQIQEFLNQGGDQ
>EF0325 DNA polymerase, putative
MKTLNIDIETYSDEDLTKVGVYKYADSPNFEILLFAYSVDGQPVECEDLT
ISEIPDEIVAALTDKNVLKIAFNAQFERVCLSKYLGIPYYLDPAQWHCTM
VHANELGLPASLGQCAKYLNIEQQKDTRGTQLINFFSKPCKPTKKNGMRT
RNLPEHAPEKWQTFIEYCIQDVNVEMAIANKLNRFPVPESEWKLYTLDQR
INDRGAEIDHELATAAIDIMADLSEAGLNEMKALTGLENPNSLAQLKKWL
EEQGTPFEKLGKEVVLKALALGNLPENVAEVLKLRLSLSNSSTKKYLMMD
NARCSDNRIHGILQFYGANRTGRWAGRLLQVQNLPRNYLSEIDFARQLVK
AKDVEGIELMYEDVPDTLKQLIRTGLVAKEGHRFIVSDFSAIEARVIAWY
AKQDWVLEVFRTHGKIYEATAAQMFHLGEVTDYDWKSHEGKDMRQRGKVA
TLALGYQGGPGALKAMGALENGIEEHELQDIVDRWRTANKRIKNFWHETQ
KAVIDCLQNGGIKKGPRGLKFYKKAGFLFIQLPSGRKLAYAKAHLKEGDY
GPAIFYEGQGDKVAFTEQQTYGGKLVENIVQATARDVLAEAMQRLEREGY
PIVFHVHDEAVAEVPEGEKSIEEMNKIMSVVPDWAEGLPLNAEGFETKYY
MKD
>EF2693 conserved hypothetical protein
MENKKSHYFYVLLCQDGSFYGGYTTEPERRLTEHNSGTGAKYTRLAKRRP
VIMIHTEKFETRSEATKAEAAFKKLTRKQKEQYLKTFH
>EF0534 site-specific recombinase, resolvase family
MNKFGAEKIFIEKQSGATITHRPIFQEALDFVRAQDIFIVEAIDRLGRNY
DEIIDSVNYLKKKNVRLIITSLPIMAEAIGNPLLDKFIKDLIIQILAMIA
EQERTESKRRQAQGIKIAKANGVYKGRPKLYSADTKDPQRRLVYKSIVQD
LKNGVAISKIAKDYNITRQTIYRIKKEIHELEIN
>EF2185 ISEf1, transposase
MNDFTTEIVQTLVTKGDLNELFRSHLEKAINTLLRTELTAFLDYEKYDRT
GFNSGNSRNGSYFRSIKTEYGELTLEIPRDRNGEFKQQTLPAYKRTNDTL
ETTIIHLFEKGVTMSEIADLIEKMYGHHYTPQTMSNMTKVLTEEVNAFKS
RALNDKYVAIFMDATYIPLKRQTVSKEAIYIAIGIREDGTKEVLSYAIAP
TESTYVWNELLQDINSRGVQEVLLFITDGLKGMKDTIHQIYPKAKYQHCC
IHVSRNIAHKVRVKDRKEICDDFKAVYQANSKEEANTFLSGMIEKWKKNY
PKVTQSLIENQDLLTFYDFPPSIRRTIYSTNLIESFNKQIKRYSRRKEQF
QNEESLERFLVSIFDTYNQKFLNRSHKGFQQVTDTLVSMFTE
>EF1595 MutT/nudix family protein
MNRNFEVELTTLCMIRNQKNEILVQERQKKDWPGWTFPGGHVEKNEGMET
AMVRELLEETGLVLKPQLVGVAEWLNDCSGARELATLFIAETADELPEET
EQPLFWVTEKELREGPLAGSLAELFPVFFGEKQFYFKNNTA
>EF3218 mutator MutT protein, putative
MKKEIRVVGAIIVEKGKVLCCQRGPERALANLWEFPGGKIENGETEVQAL
ERELQEELKIEVTIVKEEYAFCRYEYDFGFVNLTTFICYLESGEPQLTEH
LQIKWLTPNELNQLEWAPADIPTVEKLVEKGVGTEQNG
>EF0682 DNA repair exonuclease family protein
MKLLHTADLHMDRSFEGLTGIPTALAKRLREANQQLLMNIVTVAIREAVD
LVIFAGDTFHQSQTSISMQAQLMAALEQLKQAEIPVILTFGNHDYYKKDR
YWFSFPDNVFLFEKEMVETLYFETKAGEQVAVSGFSYEHPWIDENKALEF
PIKQAESDIHIGIYHGDTSRKAQQNYAPFTWKDLKATGYNYWALGHIHQP
QIVSEQPLIVYPGTPQGHTKKEQSLQGVAVVTLSQNQATVQFEKVAEIDW
TNEEVSLAQCRDTQSVLSYLETSLLTKWQAHQQQQLMALTLKETQHLDVT
VVQAIVNGELLSYLQQQLLQKTQGDFFVYRLILQAEEPTKEPIYLAASPN
LLTALEKTYLDPVIFEDTTKELLRYPEFAGIFSMDEQWRLESLRLAHEQI
NEDFTIQEDPL
>EF_A0012 replication protein
MFQNFINKFVGEKQMDLIKDCNTFLAFVTDKEQTKKKLYKNNMCKNRFCP
MCAWRRARKDALGLSLMMQYIKQEEKKEFIFLTLTTPNVKAEELEDEIKK
YNLSFGKLVKRKNVKAMMKGYVRKLEITYNKQRDDFNPHFHVLIAVNKSY
FKDSKVYISQKEWLEMWRDVTGMPEITQVHVQKIKQNNNKELYEMAKYSG
KDSDYLINQKIFDAYYKSLKGKQILVYSGLFKEARKKLKNGELDYLKEID
PTEYLYQIYYIWNQKEYLASELHELTEEEKRKINHQTINEIEEEK
>EF0615 transposase, IS200 family
MFTPKYRRKVIYGQLRRDIGKILRKLCEMKEVEIIEAHAMPDHIHMLVRI
PPKLSVSGFMGFLKGRSAVIIHERHANLKYNYGNRSFWSKGYYVSTVGLN
QKTIAKYIREQEAEDRVRDSINKREYKDPFRK
>EF1080 ImpB/MucB/SamB family protein
MKFDYEKEPSRDILCIDCKSFYASVECAERGLDPLKTMLVVMSNAENAGG
LVLSASPMAKKVLGVSNVTRKNQVPAHPDLYVVPPRMNLYMKKNQEINNL
YKKFVADEDHSVFSVDESFLDVTASLSYFHCETAYKMARIIQRVVYNHVG
IYVTVGIGDNPLLAKLALDNGAKHSPDFIAEWRYDRVPDTVWQLPSLTDF
CGIGRRMAKRLNRLGIDSVYELAQANPHLLQETFGMMGLQLYAHSWGIDR
TFLGKKAPHKAEKSFGNSQILPRDYARRDQIELVLKELTEQVAARLRKAH
CQTECITVYVGYSKGQIDREGRTGWRKQQTIPATNNTKVLITYVLALFRE
HYLAGTDVRQLGLSYGKLVWNESLQLDLFSEPEEQISEMELNYLIDKIRQ
KFGFQALIHTSSLLEGATAIHRSGLVGGHAGGNVGLGG
>EF0780 MutT/nudix family protein
MKKEFSRVLLKNQSDEILILKDRPDTWNFPGGKQELGESALECAIREMKE
ELAVEITELEEIFTGPLVFDSIVWQGHFYFAKQAQGKVTLNEPNKIKGVQ
FIKRFEEVNFSPGLAPLFDYLARSDYLKLNKTNWK
>EF1886 transcriptional regulator, Cro/CI family
MVQRNLDYRLLKDRRNEYGISQNKLATACGLSRPYLNQIENGGVTASTKT
MRKIFNQLESFNPDLPLSLLFDYVRIRFPTTDARKIIQEILHLKFDYMLH
EDYAFYSYQEQYVMGDIVVMLSHEEDKGVLLELKGRGCRQFETFLLAQKR
SWYDFFEDCLKAGGVMKRLDLAINDLVGLLDIPDLTKKCQKEECISLFRT
FKSYRSGELLKADEKDGMGNTLYIGSLKSEVYFCLYEKDYEQYIKLGIPL
DKTETKNRFEIRLKNDRAYHAIQDLLKGRSIESTTFSIINRYLRFADKVE
GKRRTNWPLNEQWGRFIGRNRKEIQLTSEPKPYTIERTLNWLGRQVAPTW
KMAKELDRLNQTTYIQDMVQNARLSDRHKKILEQQSMAIENLII
>EF2826 hypothetical protein
MRVLIRSSASGSEYWDTEEKRNVFVPKGQEPDFEVTENPESMLSKEADLH
VGGLPITVGNVTIDTDGIKGERLLTTASAADDEEQDELVPSDDESVVLEE
MNVKELREYAKRKGIEIPSAVRAKGEILNIIKESE
>EF2130 DnaD domain protein
MARPLKQGIDYFPLSVDFLRDIKVRKIKRACGPYTVEILLCLLGNIYRET
GYYIGWDEDTMFLVADEVGAKEGLVEETVNKAVQVGFFNQEKFNEYRILT
SNGIQKRYLEATKKRKEVVISDIYLVNDTIKDEETLVNGVDNEQSKVNKS
KVDKSKVNKNNKEKPAVQLSSEKDFLENPLGDKKTAELIAYYSKNVSLAT
PVNMTNLAYDLKDFNGDLDLLKEAINICSSNVKTYAYFAGILKQWRANGI
NTHADFLKKVNKKSKQKNKRDSEPPLNDYSGLF
>EF2255 site-specific recombinase, phage integrase family
MSKRGENIYKRKDGRWEGRFPRGRKIDGKLKYGYIYGSTYQEVRQKLYVA
KANQQTIYQSRGQGAFTLNEWIEQWLVIVKKEVKLSTFASYSYKLSNYVL
KTMGDSALNEIDDLRLNKLVEDLIAQGLSKSTICVIFGILSRALNHAVKA
KHLKSNPCSTISLPKPKRRHIRALDIEEQKKLENVAYKNPQQQGLSVIVA
LHTGLRIGELAALRWEDINFKKDTIHVKHTFQRVSVSSFGESTQLYYDCT
KTINSERIIPMSNTVKNALKCQKEHSQGKFVFSRNNKPCEPRLLTYYFHK
LRDKVQLDKVHFHQLRHTFATRCLESTSDIVSVSALLGHSSTQMTLDIYA
DSLLEQRIKAIKRMERTIA
>EF_A0073 site-specific recombinase, resolvase family
MAIYGYSRVSTSNQDYKTQIQKLEKAGAEKIFSEKYTGIKKEGRKELEEL
LSIVKPGDKVLVTKIDRLARSIVDLNSIISSLNNSGVTITFLDNALTFEP
NKSDSMQTLMMNMLGSFAQFERDLIVTRTQEGKQWHRANNKNYREGRPKR
VLNDKYKHALELMETNSMREVERKTGISLSTLKRIKKQAKEEQLLSEK
>EF0846 ATP-dependent RNA helicase, DEAD/DEAH box family
MKTPETRKKSFFPKQNLGGYHLKFKELGLAPELLSAVERAGFEEATPIQS
ETIPLALAGKDVIGQAQTGTGKTAAFGLPMLNKIDADNRVIQGLVIAPTR
ELAIQTQEELFRLGRDKKIRVQAVYGGADIGRQIRGLKDRPHIVVGTPGR
LLDHINRRTLKLETVETLVLDEADEMLNMGFLEDIEKIISQVPEQRQTLL
FSATMPPAIKNIGVKFMKQPEHVKIKAKEMTADLIDQYYVRSKDFEKFDI
MTRLLDVQTPELTIVFGRTKRRVDELARGLEARGYKAEGIHGDLSQQKRM
SVLRSFKNGNLDILVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGR
TGRAGKGGMSVTFVTPNEMGYLHVIENLTKKRMTPLRPPTEKEAFKGQLS
AAVETIESDLEENGLDKYLESAEALLEKYSATDLAALLLKTVAKDPADAV
PVKITPERPLPSNKKGFNKNGRGGGGGNNRNRNRGGNGKGGSYRGNKNHK
DGDRNYKNSDRKNKDQRGGKRHNDKKRGFVIRENAK
>EF_C0007 IS1216, transposase
MTMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIY
RWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGL
TLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEY
GFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRG
LYKKTRKEGTLFGFSVCTEIKVLLGIPA
>EF_A0009 IS1216, transposase
MTMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIY
RWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGL
TLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEY
GFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRG
LYKKTRKEGTLFGFSVCTEIKVLLGIPA
>EF_C0006 ImpB/MucB/SamB family protein
MLFMFDYSKEPVNDYFLIDMKSFYASVECIERNLDPLTTELVVMSRGDNT
GSGLILASSPEAKKRYGITNVSRPRDLPQPFPKTLHVVPPRMKLYIKRNM
QVNNIFRRYVADEDLLIYSIDESILKVTRSLNLFTTEGTRSQRRKKLAQM
IQERIKEELGLIAAVGVGDNPLLAKLALDNEAKNNEGFIAEWTYQNVPDK
VWNIPEMTDFWGIGSRMKKRLNQMGIMSIKDLANWNPYTIKSRLGVIGLQ
LYFHANGIDRTDIAIPLEPSKEKSYGNSQVLPRDYTRRNEIELVVKEMAE
QVAIRIRQHHCKTGCVHLHIGTSILETRPGFSHQMKIPITVLLQSFKSTI
K
>EF_A0063 IS1216, transposase
MTMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIY
RWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGL
TLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEY
GFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRG
LYKKTRKEGTLFGFSVCTEIKVLLGIPA
>EF1425 hypothetical protein
MSMSVILRKSLIEVLNKKNEKKKDVAREISTSQQSLSDWTSQNNVKPVTI
ENALRLSDHFRDSTFTMEVIHQFFGMFKTCDGDVYRKDPSSLDRLQKIES
NERKALKHDIERIVLKNPEYLSEQDISKIVAYANEYLDEVIVEITLLSSL
CDLASIDIRYLSEQRFPYWEQLGYMRKENTNGTRSY
>EF3215 IS256, transposase
MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKE
YERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNE
KALMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNE
WQNRLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIG
FMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVS
WQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHD
YIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRR
EKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
>EF0913 transposase, putative
MKALKAYKYRLYPTSKQEEFIQKTFSCVRLVYNLMLQDRIDIYKEMRKNP
QQTFKMPTPAKYKKQYPVLREVDSLALANAQVYLDRAFKNFYREKGMGFP
KKKKKETVHSYTTNNQHGTVKILDNRYLKVPKLKSLIKMKVHRQPLGEIK
SVTISMSASHNYYVSILCEAPIETKTKQQKMVGICSSREKFALLSNGESF
EKSYCSKHLKQKLRQEERKLNKRKMIALEKGVDLSQAKNYQKQKIKVAKI
REKIANQRTDILNKITTELVSSYDVICIEKAHHSNERPPKHDRSELAWSL
FLAKLLYKAQWYGKELICIESEEIETELSFSESTENSEYLRSQKILERGL
SKRETL
>EF0166 site-specific recombinase, phage integrase family
MVKFKKDKRGKYYFTASLGFDEVTGKRVQKMRSGFSTIKEAREAYAEIIN
NFGKEAYSSNSTMLYEEFFYTIFLPYYKGRVKERTYNNRLSMIKNTFAYF
FKMKLKSIAPVHIQKWQNELLEQYENTYVRNIYGLFQMSLDRAVVLGMIS
SNPAKIVGNVKKSKKEIDFWTKEEFEKVVKTFYVEDYYQNFSFICIWLLF
MTGMRIGEATALTWKDVNLDRRYLTVKKSLYYKNAQTYELVSPKTRASIR
TIYLDEDTVHYLRDWKKRQDDVGGIEFILSYNSVPTQKHTVRHIIKRHAK
LAEVHDIRIHALRHSHASLLISMGTNALLIKERLGHEDVQTTLGTYGHLY
PSSSTEIANELKGIVNVEFTNQNMASEVTNQFTKGVKK
>EF2832 conserved domain protein
MQLRPYQEESRSAVQNEWENKKKKTSLVLPAG
>EF0196 site-specific recombinase, resolvase family
MKRIGYARTTIIEDDLKNQLTTLQSFGCDDIFQETFDPQAEISVLDEVEK
LLSAGDTLIVCKLHHLGKTTRQLTDFMKMLKEKQVDFVSISEGIDTHLPT
GEAYFQLMESLSAMECALIKERTLVGLHKARENGKVGGRPKIDGRTVRKI
RALYYENKETIQFISNKCGVSVGTCYKYINLPETDVERLYS
>EF1652 DNA processing protein DprA, putative
MEILQRQLLFKLAVCQGIGNLGILKVLQEAIAQKRVDFSSTEIIRIAEIK
KYRELFEQSWLHHTIHSEALYIRQCQHQFMTILDAVYPKLLREIYNPPAI
LFYRGNLQLLSRRKIGIVGARYATSYGLRVTEALVPKIVKEGFTIVSGLA
KGIDSRSHEMAIQNGGQTIGILGTGLDVYYPYEKKELQQTMKQNQLVLTE
YVNGSGPKKYHFPARNRIIAGLSLGVCVMEARKNSGSLITAQAAMDYGRE
VFAVPGSIFQSFSTGCHELIQDGAKCVQTIDDICEEL
>EF2020 hypothetical protein
MLEALFWDHNGDFQSATAAAAVALIGAIISAVFSWLSYKNSVKTAERQYI
MEQKKIDANLKAKARIEWIIGVRDKTSELVSLLLSLQKEKTVFYEQWLEI
EKVSELLKLYFNSKMNKKVNSEIYIEQNKIIISETATSIVLKENNNINKH
AYIKKYIECLVELYKDDNYKNISNKIRFYHDSINKLYEDNFEYWMSHEQS
ELEKIKNTPPEKLEGEDYDYVAAEKNIEHYQRKIKDIEVSLTNYHKAIDF
FTTVISLYLKIEWDKAKEGQ
>EF0125 IS256, transposase
MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKE
YERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNE
KALMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNE
WQNRLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIG
FMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVS
WQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHD
YIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRR
EKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
>EF_A0040 hypothetical protein
MRERLKQAQPLVIVLLLVLLTTLGGGYFNEKKENAQIKNQKEKEQQVLKK
TLEEKNGQLNDLSRKIEQLLDEKEDPVNEPLTKAVNALFSLVFDYDSSNK
EQTVAKRKEKATVYATEQGLSGVFPRDSDKVVPSVVTVSQLDKAPEIYRT
TQKDTGKEKTALVRLEYSVRIAGSQAQRGNFIYKVTFNEESKKFTTIENL
GEENQ
>EF_C0009 site-specific recombinase, resolvase family
MAIYGYSRVSTSNQDYKTQIQKLEKAGAEKIFSEKYTGIKKEGRKELEEL
LSIVKPGDKVLVTKIDRLARSIVDLNSIISSLNNSGVTITFLDNALTFEP
NKSDSMQTLMMNMLGSFAQFERDLIVTRTQEGKQWHRANNKNYREGRPKR
VLNDKYKHALELMETNSMREVERKTGISLSTLKRIKKQAKEEQLLNEK
>EF2663 helicase, putative, RecD/TraA family
MVTLFGEDEEKAFIVGTVQAIFFENPSNFYKVVLVNVTDTNTDYLEKEIV
VTGSFGQVQEEEPYRFFGHFVDHPRYGRQFQVDSYQQERPTSASGVVNYL
SSDKFPGIGKRTAEKIVEVLGESAIDRIIDDPSVLEEVTVLNEKKRQVIV
ETIRLNHGMEQVIVGLNRYGFGSQLAFSIYQTYQEETLSVIQENPYQLVE
DIEGVGFKRADNIAEQIGIQADSAVRIRAAILHEVFEHSIRSGNTYVQAD
VLLEEAIRTLEASRPVEISPDQVANEIITLVEHGKIQQEETKLFENSLYF
SEWGIGTSIQRLLSRKKEIHYEEEEVQKNIRMIEKRLNIQYGDSQQAAIE
EAIKSPLFILTGGPGTGKTTVINGIVSLFAELNGLSLDLKDYTQEMFPIL
LAAPTGRAAKRMNETTGLPASTIHRLLGLTGREKNPSLTAKELEGGLLIV
DEMSMVDTWLANTLLKAIPTNMQVIFVGDKDQLPSVGPGQVLHDLLQINE
IPKCELNEIYRQGDGSSIIPLAHEIKEGKLPADFQKNQKDRSFFASDIGH
IEEYIRQIVTKAKAKGFTPQDIQVLAPMYRGAAGIDALNKMMQEIFNPND
GKKKEVKWNDTVYRIGDKVLQLVNTPELNVFNGDMGEIVGITLAKDSEDK
VDELVLQFDNNEVTYKRNEWNKITLSYCCSIHKAQGSEFRMVLLPMVHQY
SRMLQRNLLYTAVTRSKELLILLGEVSAFETCVKNESASRMTMLKERIVN
AEQMTLTTRTQLEAYEEGLTADHPFTETETKAVFYETEQQSTKADQIKET
DEQLVDTTVQEVSLFADEGEESTSPAEPQKEEQLPENPVLSIQEIQENKI
NPMIGMAGTTPYQFM
>EF1750 endo/excinuclease amino terminal domain protein
MKEYLKEKAHQLPLTPGVYLMKDATDTIIYVGKAKKLKNRVSSYFINSNQ
HSRKTMRLVKQIIDFDVLHTDTELDALLLECQLIQQYRPRYNRQMNAYEQ
YSYVSVAVNERQLEIKLLNIPTKENCFGPYSIRRKLNRLKIILDSIYDLV
PTNYWHQTFQKESAIPTELFQQELFDFFHNQGREPIKRIAQQMQEAAEKQ
AFEKAAKLKEDWLFLTRFANQNQRISQANQRDWQLMWLPCQKKIKYYLIY
QGLVVATRVVTKQTFQKYSPLELAKKIMPKKPPKTIEHYSKQQVDFLNIL
YGYISRHPECHLENLTIEKA
>EF2855 site-specific recombinase, phage integrase family
MATFKQYTKKGKKYWKVTAYLGVDYLTGKQINVTIRNCNTKKEAQLKLNQ
KKLDFDNGNLANEHTRLTTFEEVYYMWLDEYKKTVRESTFIATERRMKKH
ILPTFGKMRLERLTVKIVQKSVNEWYKKNEMGKVLLSYASRVCDYAVGLE
IIDSNPFKKITKPSSLKKLEKNTKRKFYTKDELEHFLNTADSIANQAKEE
SLVLKYYADLDCAIFRLLSFTGIRVGEALALNWNDIDLKKQVVNINKTTA
ISTNGLTINDPKTPNSIRKISFDNKTAYILKKWKLRQHEALMKKGGFKTQ
LIFTKIDGTMSRSQDIYQRSKRLAEKANLHSIGCHGFRHTHATLLFESDN
VRSKIIQERLGHSSLQITMDTYTHVSDEVTKEATDAFSSYVNF
>EF0659 phage SPO1 DNA polymerase-related protein, putative
MHYPEHLKKAVLAKAKDLPLEGFVEGQGPQQPKVMLIGEAPGKEEIKENV
PFIGRSGQLLMEQLQQVGLSRETVYITSAVRSRPFSVKTKQIAKTGERVT
KFPNRTPTKEEIKIFAPLLDWEIAVCQPELILTLGNIGLQRLLGPKPTIT
AVHGTVIQSPIQTFDEQSQNYHWTQKTYQIIPLFHPAAVFYNYRLKEVVK
EDWQVVQKQLQLLKKV
>EF1443 conserved hypothetical protein
MNKQEKEDLIQALYDIGGCEAEDEWARGYDDGVNAAIDVIKELKVQGKVI
FSHEEKFVADWLDGLKGKISDKKLSSGAAFMVFVGQQLECLYYNEYTLIT
DDVEGWLLHPENKVKLLNAIDNGYEVEKKQLYYVDFIKNDDVHKRLVFDH
ENGKYNIVDWSDNLIGLVQEIFTEQEIKAIDERYWPFAVKADGGE
>EF2315 hypothetical protein
MKIDRLKTDLAKAREKAAEWQARVRDLEKQITEQENLEILQVVRSVAASP
EELRGLLDMIRGAKMPMAGTARTFENMDKEEI
>EF2800 ISEf1, transposase
MNDFTTEIVQTLVTKGDLNELFRSHLEKAINTLLRTELTAFLDYEKYDRT
GFNSGNSRNGSYFRSIKTEYGELTLEIPRDRNGEFKQQTLPAYKRTNDTL
ETTIIHLFEKGVTMSEIADLIEKMYGHHYTPQTMSNMTKVLTEEVNAFKS
RALNDKYVAIFMDATYIPLKRQTVSKEAIYIAIGIREDGTKEVLSYAIAP
TESTYVWNELLQDINSRGVQEVLLFITDGLKGMKDTIHQIYPKAKYQHCC
IHVSRNIAHKVRVKDRKEICDDFKAVYQANSKEEANTFLSGMIEKWKKNY
PKVTQSLIENQDLLTFYDFPPSIRRTIYSTNLIESFNKQIKRYSRRKEQF
QNEESLERFLVSIFDTYNQKFLNRSHKGFQQVTDTLVSMFTE
>EF3068 conserved hypothetical protein
MDTLQFQKNPETAAKMSAYMKHQFVFAGIPAPERQALSKQLLKESHTWPK
EKLCQEIEAYYQKTEREYQYVAIDLALQNVQRFSLEEVVAFKAYVPQKAW
WDSVDAWRKFFGSWVALHLTELPTIFALFYGAENFWNRRVALNLQLMLKE
KTNQDLLKKAIIYDRTTEEFFIQKAIGWSLRQYSKTNPQWVEELMKELVL
SPLAQREGSKYLAKASE
>EF_C0015 ImpB/MucB/SamB family protein
MKFDYSKEPRRDVLCIDVKSFYASVECVERGLDPLKTMLIVMSGADNAGG
LVLAASPMAKKVLGISNVTRKDEVPDHPELLIVPPRMNLYMKRNSEINNL
LKRFVADEDHSVFSVDESFIDITASLKYFNCDTAYRLAKIIQRVIYNHMG
LYVTIGIGDNPLLAKLALDNEAKNTPGFVAEWRYEDVQEKVWSISPITEF
CGIGKRMAARLKMSGIESIYDLAQADPYLLKHRFGVMGLQLFAHAWGIDR
SFLGEKSQVAKEKSFGNSQVLPRDYARKDQIELVLKELSDQVATRLRNSN
CQTECVSIFVGYSKGQVDGLGRSHWRKQLKIARSNNTKVLTEHVLKLFRE
NYVPGMDIRNLGVSFGKLVWDTTLQIDLFSPPEEQIINNQLDFLIDKIRQ
KFGFKALIHASSLLEGATAVNRSGLVGGHAGGNVGLGG
>EF1279 DNA replication protein, putative
MAERRMFAKTIIDSDAFLDMPLSSQALYFHLAMRADDDGFINNPKKLQRM
VGCGEDDLKLLMVKKFILVFESGVIVIKHWKIHNYIRSDRYKPTLYQEEK
NQIVEKNSKAYTFKAESSVGGQPADYQRLPQESIVQSKLGQSQGSSSEND
CLKMIYHFYEENGFGTLASKTSQDFKYWLQDFIQKGASQEEACQLILHAL
GIAVDRNKRNYGYVNAILKSWEQQNYLSVHEVLVNDKKQVLEHAPQMTEE
YQELGF
>EF1203 conserved hypothetical protein TIGR00250
MRIMGLDVGSRTVGVAVSDLLGWTAQGIEIIRINEEEENFGFERLGELVK
EYEVTKFVVGLPKNMNNSIGPRAEASMAYGDKIQELFQLPVDYQDERLTT
VQAERFLVEQADASRAKRKKVIDKLAAVMILQNYLDAHSR
>EF2841 recT protein, putative
MSNDLTQITQRSLDEQVIGNLNRLQEQGLEMPPGYSPQNALKSAFFELTN
NSGGNLLQLAANNPETKTSISNALLDMVIQGLSPAKKQCYFIKYGNKVQL
MRSYFGTMAVLDRVTGGADITPVVVREGDVFEIAMDGPDLVVAKHETAFE
NLDNDIKAAYVVIKLANGKEVTTVMTKKQIDKSWSKAKTKNVQNDFPEEM
AKRTVINRAAKYLINTSNDNDLFVQAAKDTLENEFERKDVTPEREEQAAV
LEEKLFSNNIKAVDQENENERITRVADVPEQPDIEQAKPIEKDNLTKVAD
QILEEPVQETLDVMAGYETNQKESEADVSTIEEDDYPF
>EF1404 MutS2 family protein
MNQRILSTLGFDKVKQQLLQFIVTAQGTNEVSELLPIADENKIQSWLNET
QDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTS
ELTRFFDELSENEVDFERLYMWREQLEVLPELNRQLKQAIDDDGYVTDEA
SPALKAIRQNIRRSEQTIREELDSIIRGKNARYLSDALVTMRNERYVIPV
KQEYKNIFGGVVHDQSASGQTLFIEPKQILEMNNRLRQQQIAERNEITRI
LAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEISQANH
VVFKQARHPLLNPEKAVANDIVIGEEYQAIVITGPNTGGKTITLKTLGLL
QLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVS
VLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYP
ELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLD
NSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALH
KELKEAYQVFFEEREKELQKARKEANKIIAEAEENAETIISDIRKMQLES
GQQGGVKEHQLIDAKTQLSQLHHEETKLAKNKVLKKAKEQKKLKAGDEVI
VNTYGQRGTLLKDNGKGQWQVQLGILKMNVSEEDMTPVAPQKEAKPRVTT
VRSAESSHVGTQLDLRGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGT
GALRTGITEFLKNHRSVKSYEFAPQNQGGNGATVVKFQ
>EF1979 ATPase, AAA family
MQQPLAYRMRPRHLDEVVGQQHLVGPGKIIRRMVEAKMLSSMILYGPPGT
GKTSIASAIAGSTNYAFRMLNAATDTKKDLQIVAEEAKMSGTVILLLDEI
HRLDKTKQDFLLPHLENGRIIMIGATTENPYITINPAIRSRTQIFEVKPL
TETDIQQAIQEALTDSTRGLGDYPVHLEEKALQHLTRATNGDLRSALNGL
ELAVKSTPKNEQGEIKITLPIIEECVQRKALTHVKDGDAHYDVISAFQKS
IRGSDVDAALHYLGRLVEAGDLPIICRRLMVIAYEDIGLGNPAAAARTVT
AVQAAEKLGFPEARIPLASVVIDLCLSPKSNSAVTAIDAALADIRQGSVG
DVPDHLRDAHYAGAKELNRGIGYQYPHNFENGWVNQQYLPDKLKEARYYE
PIDIGKYEQALHQQLKRIQEWKQKK
>EF_A0056 IS1216, transposase
MTMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIY
RWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGL
TLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEY
GFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRG
LYKKTRKEGTLFGFSVCTEIKVLLGIPA
>EF_A0006 IS1216, transposase
MTMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIY
RWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGL
TLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEY
GFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRG
LYKKTRKEGTLFGFSVCTEIKVLLGIPA
>EF_A0013 IS1216, transposase
MTMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIY
RWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIDADGL
TLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEY
GFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRG
LYKKTRKEGTLFGFSVCTEIKVLLGIPA
>EF2145 site-specific recombinase, phage integrase family
MAEPKKLANGKWQLRFKYKDSITNEWKNKMITRSTKKACRDAETEFKSKI
MRGENTEAIKLLDFYDIWVDTFKKNKVSAGRMQKIALTRKNLHDFFGDKQ
LLKGVTKVKYQQWINWLAKPGNINEKGLAVETVSNRHNIVKSMFLEALDM
QYIHSNPTRNIKLTGQVPEKKSNKTISIDDLTKFKEALLSRENTTSKYFI
LVQLYTGARYQEVAALTWDSIDESNEVIKIKNAYKYDAGQYRIGPTKSEA
GVRNIDVPSSLFYYLKKYEMEQKKKILRGDLRNPQNFAFVSKKNSWPISN
SSVNKYIKETCELANIERISSHSFRHARSDLLILAEADPIYIKTQLGHKE
IIQSYEYASATEANRKKNKEKYENKYKDIL
>EF2096 tail protein
MAVENISIRIKDNIKDIEKELDSLDRRIAKLKGQRPAIEWNTTKLKKAKE
EIKNINVDIKKLQAQKATIKADVNTKDAKEKISTLNQQIKQLQSRKANLQ
IVTTQLQGSEAQLRKLDNEISRLNNRKAMLQIDSRGLGETGEESRKLQNS
LRSMSERTYKINVSSNLDKLSGLANNASNKILGAFNPLTSKLNQMLGVGL
AVKAVDKATSMITNSIDGSISRLDTLNNFEKVMSNMNISADQADIAKSKL
VKGLNGLPTTLDDAVASVQRFTANNKDVQKSADIFLALNNAILAGGMSRE
IQSSALEQISQSYSKGKPDMIEWRSLLTAMPAQVDQIGKSFGLTSDQLGE
ALRNGNISMDQFMDRIVEMNKNGAEGFKSFEEQARNSVGGVRTGMSIMNS
AITRGVTSIIDTFDKMAKDKGLGGIAGVFGKIGAAFEDNLKKIGAFAEEH
SDDIFRFFDKVVKFLSTIDYASFFEGLGKGIKGVKDDAVGLFNLLKPIFE
FLGKGDTLKGLGAFIPRLFEFGVALKFIAISAKGLSILSKVFGVFGKIKL
PKFGKGGGASEIVKPLESLKSIGTGFLKNAGNLALLFGAIKVLEEGAEAM
KQLDEKIPNDFTGLAKKTASMSLAISAIGGLAFIASKLNFTDNLKGIASI
ALISVDLMIASEAMNQLNEKVPNNIGIVAKKLGSLSIAIGAMAGLVVIAG
AFSSANPMMAISGLASVALLSLELMIASEALSQLNEKVPSDIATIAKKVA
NIGIAIGAMGLLVGVIGGLSIATFPAAIAGLAAVALLAGELMLVSESINQ
LNKKVPEDITSVKNKLESLEEVLSYMAKSSIGKISSLFKGIIGTFTASTY
VQVIDGLIEVSNGLKRLASASEDINSAKLVNNIYDINKAVEVIGGKDNIF
EKLGSLMKGKVDTAIFDEMENILNKMISLSNKMKTLQENKFSISDITSKV
TVIKDILEKLDPADWDIAKSGVVSSKIIDQADTTIFWLNKLSKKLAALSE
SKLETGSVQNVLQNIKGALRMLTNESWSDFIGGVVPKDFIDMTGQSVDGL
NSINKKLSKLSETSFDLGKTQTMIANLKSSLRMLQIKSWGDFDGGIVERG
TLDKLDTAVYWLSSIAKKFGTLSNFEFDGGKLQGIIANIKGALRLLQADS
WTDFNEGIVGKRLLDQLDTSIYWLNKVGSKLNELSNLPLETGKAQSVIQN
IKGSIRMLRIDSWSDFNDGFVDREMLSGLDVAVLWVTKVANRLTGLSGIN
IETDKINSTIASTKGALRMFQASSWRDYNEGIVKADFIKALDLVLINFIQ
LANRVNGLASITLENDKVHSTITAVKGVINRLTIDTFPDSNTMIGEDVID
KIDTTVYRLITLANRINQIPQLTLGVDELSNNIKSIKYVATEMAISKWQG
ISEGVISSETLGMIVSSVSKLGTISNKLSVLNALPFDWTSVLNNVNRMKS
IIELMNTFPSAKGLDSIPELVESFKNLLITLQGLESKFEPIGKSYGQQVI
NGFKNADVPSKIKKVIDDLITNLRNKDTEFNNVGKGFGDSLKSGFTNALQ
GLDSNIDSYVTSINNKISSIQTNLNSLTAPSLTVDVTENVKTRRVTRANG
GIIPQYRANGGSIMKHIFKSKGTDRVPAMLTAGEYVQRKKAVDHFGIDFM
ERINNLDLSGALASITNRFGNSQPVSNVMNRYYNTTKNTRNNNNTINQNI
SMTGNPNFANLRANRFLRGV
>EF1280 DNA replication protein, putative
MHATDQTFQILLSQLLEKVEDRCPECGSEQYVWQQKNKDGTERCAPTCWS
CGYKMLKKHEQQANQQRSQESFMARTQKFFHQGSLIADDALRQCRLTNYQ
TTELETRQAKERALAAVSAIVEGKPIHVIFSGKPGVGKSHLAISILVEVL
ERSAYQKYCLFVSYSELLEKLKMSMNESAKSQAKAQAYITRMKKADVLVL
DDLGAELGIKNKVSTDFNNDILNRILEARQNKATIFTTNFSGKQLVEAYG
TRIISRLMKHANGYVFQYKDTTDKRMRSVK
>EF0529 IS256, transposase
MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKE
YERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNE
KALMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNE
WQNRLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIG
FMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVS
WQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHD
YIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRR
EKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
>EF_B0029 conserved hypothetical protein
MENKQKLKRPIQRKIRFSKEENELINRKIEESFFPNFQNFALHLLIQGEI
RHVDYSELNRLTTEIHKIGININQMARLANQFHEISSEDIKDLTDKVQSL
NALVQSELNKLIKRKEQS
>EF2240 site-specific recombinase, phage integrase family
MRRIANVYKDEKRGTWYFSLTLGYDRFGKRIQPTRRGFKTQKEAKDAMEE
LKKNYSDSQEIYLQGITFREFYKKYFFPWYKLGTIEKTYVKTDKTLKRAL
AYFGKMQMEKIRPIHIQEFQQFLVQECFVTNKEGKIRPLSNNYIKQIFNK
LRIIFKRAMVLEVIDENPVDTIGKIRTQRSVVAFWTVDEFKKVYNCSYRC
DFQEAFYKRMMRFLFVTGLRSEELFALQWPDIDFHKGTCCVNKSLYIRTR
TDYDFSDTKNASSIRTITLDKQTIVDLREWKETQKTIGDDLGFIFTFDGL
PPSPKTFLGRVKKLAEIAGVKPIHLHGLRHSHVAFLIEHNNNIYAVSKRL
GHSSVKTTLDKYGHLYPNTNQTLADEFTKFEV
>EF3217 helicase, putative
MWELNKMDNLELALQKAFINKETLGDELTPKFIVNNPKKHDYLLNTLSKD
LKSCKTFFIAVAFITPSGLNAIKTQLADLALRGISGKILTSTYLNFNDPH
VFRALLNIPNVEVRVSKKEGFHSKGYLFEMEDYQSFVIGSSNLTMSALKL
NYEWNVRLTSRENGEMVSSIQKHLIQEWHEAQSLTLEWVDAFEKNYHPIV
NRKMLVQDVSENECLDTQYILPNSMQKEALRSLKALRETGATKGMIVSAT
GTGKTYLAAFDVQQFHPKRVLFIVHSELILMKALESFKLILGGKDDDYGV
LSGNSKNFDAKYLFGTIQTVSKSEYQERLGKEAFDYILIDEVHKAGAKSY
IKAIEFFNPKFLLGMTATPERTDNFNIFELFDYNVAYEIRLQAALEAELL
CPFYYFGVTDYEKDGEIIDETTDLKRLLQKERVDFLIKKINYYGYSGDSP
RGLVFCSRKDEARQLAEMFNDRGIPSAYLSGDHNFDKREKEIKRLDTGEI
HYIFTVDIFNEGIDIPKVNQVIMLRNTQSSIIFIQQLGRGLRKDPSKEFV
TVIDFIGNYKNNYMIPMALSGDSSQTKNSLRRDTIDVTYISGLSSINFEK
VARERIFKSIDQAKLDAMSELKASYFKLKNRLNRVPYLNDFQVLDGVDPL
LIIGKEKTYYNFLERIGETEAKLSEEENGALKFVSVELLSGIRPHELYVI
EEFLMTDKEQLSLEEITALFDTFNLTYTTDTLASVVKVLDLSFYESTIRK
RYLLSQMFKMKENCLQITEKFREFKKNSYFINLMLDVIHTGINKSMEYDL
SQPLNLYKKYRRKDVLRLLNMNFNQNEQSIGGYTNSNNHFAIFVTLDKGK
DFKAARIAYEDEFIDERTFHWYTKAPRNLRSPEVQLLRNPGEYKFHLFVK
RKYNQKENETDFYYLGEVAPLQETIQQVEKQDKEGKKKSVVKLDFTLETP
VEPNMYEFLTQNTN
>EF_C0004 IS256, transposase
MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKE
YERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNE
KALMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNE
WQNRLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIG
FMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVS
WQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHD
YIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRR
EKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
>EF2043 site-specific recombinase, phage integrase family
MAKLNWSKKYKYVFSYSNKKGTFWGYRYPYYNSLKHRKEASKRGFESERA
ANKALLKIQYDLETQNTSFVENKQLTIDEWIKVWIPYAQDNWSVSTKQNI
ESAVKFHISPLIGNQKLSSLNKITYKREFIDKLRQENKYTESTIQTWHKI
VMRMINAAVHNQIIPSNTLTGFKFDLSNNVRSFSKKELQRFVAVLENEDI
QTQVIFLTLLKSGMRKGELMGLRWSDIDLTEKYFDINSTRGDYGENKPKT
KTSIRKVYFDNSLLTLIKKYKNHEKERLFREGIILSDKDYFILSSRNLPI
KQSRITYMFRLLCEKAEVQNITVHGLRHTHATFLIEAGANIKYVSTRLGH
KNINITLDVYSDVLKEEEKETADMMDKLIENL
>EF1377 ATP-dependent RNA helicase, DEAD/DEAH box family
MPSFKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGS
GKTHTFLLPLMDKVKPTIDEVQIVITAPSRELANQIYQEAQQLARFSQPE
IRVSNFVGGTDKQRQLNKLKHQQPHVVIGTPGRILDMMNEQALKVHTAFA
FVVDEADMTLDMGFLAEVDQIAGRLPEKLQMLVFSATIPEKLRPFLKKYL
ENPVIEHIKPKAVISETIDNWLISTKGKNSNKIIYQLLTIGHPYLAIVFA
NTKQRVDEITDYLKDQGLKVAKIHGDITPRERKRVMRQVQNLDYQYVVAT
DLAARGIDIEGVSHVINAEVPHELDFFIHRVGRTGRNGLNGTAITLYSPA
DDEAITQIEQLGVSFKPKEIKNGEIVETYDRNRRTKREKSREELDPTLIG
LVKKKKKKIKPGYKKKINWAIEDSNKKKRKIERRQKDRSARKAKKNSSN
>EF2546 site-specific recombinase, phage integrase family
MITKKENGYFVDVSLGIDPISGKQRRKRLTVSTKKEAQQIESKYLRLYHE
NKLTTNSDLTLKDIYEVYEEKYTQNLKPSYKQTQERIFKNYIEPYFKNTQ
IKLIKKQQIYDFQQFLLTSKPKRKETLSNKTINMIIIHLQKLFNVAMKEG
LSYENPCNQIDKLKVQKKEIDFWTLDEFTTFISHIDKNKPFLKVFYQFAF
FTGMRAGEMIALTWSDIDFYNQTVRINKSAKLINGNYVTTTPKTESSNRY
ITINSKITAMLKKWQEIQPKLLIDNFQNIDSDKLLVFQYSEKHPSSDYYS
KQIKKIIVKNNLNLKPIRLHDFRHSHVALLIHNNEKNTTIKERLGHSSIT
TTIDTYGHLYPNSQKSMSDKFDNYDIFEL
>EF3100 IS256, transposase
MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKE
YERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNE
KALMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNE
WQNRLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIG
FMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVS
WQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHD
YIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRR
EKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
>EF2810 conserved hypothetical protein
MVKWQATLSTTEPYNYIGIQNVRQGNRNTEVLEAILVENALPLDLTGCEV
FFESVIDNKYPIQRAAKIVNAKKGIIQYTFDEYSMQSLHRQEAYFSIHKG
DNLIGSTQNFSYFVVNAASKTEGEMGSYWQSIEDLIADMTAFINENKGDF
TAWMNARKEEFEKWRKNQQDTFEAWRNGQETDYLKWFESIKDILKTIDPG
GTMLAELMDARVDIQGVRHNSLSERLLADMNYLYHRLEERLYTIKYGNVN
TLEILEDDSFSKNHEVEVLGTVNHPIEEGALIIATVDDSKQNVFTIEGVD
NG
>EF0935 primase-related protein
MKVAEIIVVEGKDDTRRIQEVVAADTIETIGSAINDEILTQIEHAQETRG
VIIFTDPDYSGEKIRKTIMEVVPDAKHAFLSRKVAVPKKNGGSLGVEHAS
DEAIIEALKKVVTPVQADEDYQEIPRQTLVEYGLIAGANAKKYRELLGDD
LRIGYTNSKQLVKRLSMFRITEAELKESMTRILKELANEE
>EF1009 ATP-dependent RNA helicase, DEAD/DEAH box family
MRFLEQLPEAWQEQWQASGFNEPSTIQEKSFTPLREGENVLGISPTGTGK
TLAYMLPLLLTVEKGQGNQLLIIAPSQELAMQIAEVARTWAKPLQLKVQT
LIGGANVSRQIDKLKKRPEVLIGTPGRILELMKNKKVKAQLLKTIVMDEV
DQLFQEEELSLTKQILTHTPTEYQLVFYSATADRVVNQAQSLSQKLQVID
VTEEDTSAGQVAHYFIRLAPRKKADYLRRLAHTEAFRSMVFFNQVADLGA
AEEKLVYENVPAIGLASDQSKQLRKLAIDQFKAERVKLLLTTDIAARGLD
FTGVPYVVNVDVPLTEESYIHRSGRVGRMGAQGAVITFINDGTKRDYQRL
MKQLAIPYQEIFLYDGALHEQPKAKDELEKKNVVKDTYSEKKSTKERKPE
TVNSVVKEPQETRKKKKNKKKNTKNKGARKAKK
>EF1162 helicase, putative
MKSTRKIAVRQVVEFILRRGSIDSRHVSEHTPQEGSRLHRMLQKEAGSLY
QKEVSLKIEVPLNGHNYCVEGRADGIFVKETGQVVIDEIKTSEPAFEELP
PEKVELFWYQAMCYGHMYCQQEQLSEITLQLTYYQTTTKQITRQERHFTE
AALAEFFTDLMKRYEQWVIFKEEWRILRNKSLKNLSFPYGEYRKGQRELA
VAVYKTILSKQRLFVEAPTGTGKTMSTLFPAMKAIGEEEGERIFYLTAKT
ITRQVAEDAVKALSEKQAQTKSITLTAKDKICFLTERNCTPEHCPFADGY
YDRLNEGLWDLLQHENHLTREVIERYAQKHQLCPFELSLDASLWCDLIIG
DYNYLFDPTVYLRRFFEEPQSAEENIFLVDETHNLVNRSREMYSAAISRN
AVLQIQKRLQKESVQLKRACQKVLTTFDDIEAICEEKDTDFFAQRAPIDS
LVKQIHRLTEVIAEWLPENQHIEELASILSFYFDCLSYLRISEYYDNGFY
TSISLRNYDCVVKQFCVDPAYLLSQRLDKGKASILFSASLTPLNYYQEVL
GGGEESLRYRIPYPFPEENQLLMIGSHLQTTYKNREKSYPQISELLGKLS
ETKTGNYLIFFPSYAYMDDVYQVFSQRYPQVKTQIQGTDLNEKEREAFLA
EFKENPQETFIGFCVLGGIFSEGIDLKGTRLIGTIIVSVGLPQMNPEQEL
IRTFYQEERGQGFQFAYQIPGMNKVLQAAGRVIRDAQDKGFVLLLDERFE
LPSVQRFFPPHWLAHRKANTNEQLIQQVKQFWLKNKENKGGNK
>EF1452 adenine methyltransferase, putative
MQIEKMKLSDLKAADYNPRVDLKPGMQEYEKLKQSILEFGFVDPPIYNIQ
TGNLVGGHQRVAVAKELGLFNEIEVSVVDLPLDKEKALNVALNKISGRWD
EEKLSILLNELDDEAVNLTGFDTEEVDSLLASFNYEEDIEKPIIEDDFQV
NEFIENHHEAKTKLGQLWKLGNHYLLCGDATKLSDVEKLLQGKKANLVVT
DPPYNVAVKSDNKELNESGREKIMNDDMSDEEFDQFLMSVFQNYSNAMRD
DSAIYVFHGSSYQREFENSMNAAGIVVRSQCIWVKNNATFGWSQYRWQHE
PVFYAHKKKQAPSWYGDRKQTTIWQDDLLEDLPATIWKVPRDDVATYYHP
TQKPLSLIAIPVRNSSKRQDIVLDLFGGSGSTLMTCEQLNRICYTLELDP
LFCDVIIERFEKSTGIIAELVE
>EF1434 DnaD domain protein
MTLNYLQQILAFDDYLLYKQKLSSGQIALWRALMSINNKAGWATWFTAAN
ATLESLSGLSRSGINKNRNALKQLGLIDFKSNGRKATSYKVCVLYTLNSA
QESTQQSNDKVTLKSTTQSTNSGTLIKHKQNINTNNSFSPETDKNKLNIY
AAVEQNFGRPLSPIEMEMIKQWQTEDGYPDDLIQLALKEAVLNQAFSLKY
MDRILLSWERKGIKTKNQAIKKISEYNMRNDQEEISVDSIPKVTMHNWLN
PEGN
>EF_C0002 IS1216, transposase
MTMNPFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIY
RWVQEYGKLLYQIWKKKNKQSFYSWKMDETYIKIKGKWHYLYRAIDADGL
TLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEY
GFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRG
LYKKTRKEGTLFGFSVCTEIKVLLGIPA
>EF2632 IS256, transposase
MTQVHFTLKSEEIQSIIEYSVKDDVSKNILTTVFNQLMENQRTEYIQAKE
YERTENRQSQRNGYYERSFTTRVGTLELKVPRTRDGHFSPTVFERYQRNE
KALMASMLEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLEPMVNE
WQNRLLSEKNYPYLMTDVLYIKVREENRVLSKSCHIAIGITKDGDREIIG
FMIQSGESEETWTTFFEYLKERGLQGTELVISDAHKGLVSAIRKSFTNVS
WQRCQVHFLRNIFTTIPKKNSKSFREAVKGIFKFTDINLAREAKNRLIHD
YIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQEVRRR
EKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
>EF2374 DNA polymerase III, epsilon subunit/ATP-dependent helicase DinG
MKGVKSLKDKQVYAVVDLETTGTDPTSDRIIQFGCVLVQDGKIIANFATD
VNPNQVVPKQIQSLTGISNTQVQKAPYFEDVAHTIYHYLEDTIFVAHNVH
FDYNFLARELVRCGTPPLTIPAIDTVELAQIFLPTEKSFRLSDLSESLGL
SHENPHQADSDAQVTAELLLLIQEKMKSLPLVTMEKIAELSQQTARETSA
FIQQTYEQMKKQVTPLNPAYQVVSGIALRKKEVPLFEETFYQTSTYPKTK
KAKEKLFGERFAYRAEQSRMMNLVYDHFTEGTTKDLFIEAATGTGKTLGY
LLPMSYLATPEKPVIISTVSIVLQNQLVEKDLPLANQICQGKLRGIVIKS
HRHYLDLQCFKATLNQPTPQKQYALYQMGVLVWLLETETGDLDELQLTNL
NHLFWKEVTHRGLDFLSKKDELYEVDFLRHLYKKVAQSNVLIVNHAFLAQ
ESLRKQPLLPESPWLIIDEAHHLPDIASRMASERVNSVILKKQVTHFIEK
EQLFVALQQIFQQFSEEQRFVKIYQQGLLDFVDEWQDFLFELHRLFSKTQ
KRIDHQELLLTKERIDYLSAAGEKHSQTLQLLLQELLTIQSKLQQTIMSQ
LETFSLADRIVFVRLFQFFDEIERIHHCFTIYLDDWRPRWVKEYLPQNED
HGLIEIHDLEASLLPETKWYPRYERIIYTSGTLKFGNNKKYLPQRLGLTE
VTFKTLPTPYNYAENARVYVPEEAVAIQNASSYEMGQYISDTIEKLMAQE
ERSMLVLFTSHELLSTVYHQVQPRLLEKGQEVLAQGISGSREKILKRFSN
GKPNVLLGADSFWEGVDLPGTALQLLIVTRLPFENPKRPLVQAKYAYLEA
EGIQPFAQEAVPKAALRLRQALGRLIRSEEDRGALLILDRRLVTAKYGKR
LIKAFPKGLSVKEAPMPEILEELKEFLNK
>EF1978 DNA-3-methyladenine glycosylase
MVKEMKETINIFNTKTTEEVAQYLLGMYLEHETATGVLGGYIVDAEAYLG
PDDEAAHSFGLRKTPRLQAMYDKPGTIYLYTMHTHLILNMVTQEQGKPQG
VMIRAIEPVEGVDKMIENRQGRQGVELTNGPGKLVAALGIDKQLYGQSIF
SSSLRLVPEKRKFPKKIEALPRIGIPNKGRWTELPLRYVVAGNPYISKQK
RTAVDQIDFGWKDEENEKSNNAHILRGTT
>EF2340 C-5 cytosine-specific DNA methylase
MYDITSVSDEFIQSLGPVDILCGGFPCQAFSIAGKRQGFSDTRGTLFFEI
ARFAALLQPKFLFLENVRGLLNHEGGATFETILRTLDGLGYDVEWQVLNS
KAYVPQSRERVFLIGHSRDICTEQVFPIIESSATSDQNLRNLLNTNPSNR
GMSEQVYGSDEFAPTVTGDEGIKIALPVNDGISVVGMLPGNFEQGNRIYE
VTGTAPTLSTKQGGTKIMIRKNKIEYQEVKPEGSVNLAFPHSKSRRGRLE
KQSVHTLLTGDQQAVITDQYQIRKLTPRECWRLQGFPDWTFDRASQVNSD
SQLYKQAGNSVTVPVIFDIAKRLKEVKTDDL
>EF0934 hydrolase, TatD family
MIFDTHTHLNAEQFNDDIPETIAHAQELGVTEMAVVGFDEPTIEKSLLLS
QEYANIYSIIGWHPTEAGSYTPEVERRLQEQLTLPKIVALGEIGLDYYWM
EDPKEVQEKVFRRQIAIAREMNLPFSVHTREALEDTYRILKDEKISDIGG
IMHSFSGDAEWMKKFLDLGLYISFSGVVTFKKALDVQEAAMAVPLERMLV
ETDAPYLAPVPYRGKRNEPGYTRYVVEKIAELRQLTFEEVAEQTRVNAHR
LFRIDK
>EF2258 conserved domain protein
MTEKKFIQDPWAKMTTRNGLAGDEVISALQKSIRRGKEKDACEFAYEMYI
TSPQFEEKLWRRLLAISVEDIGMGNPIAALMINNLNMMRKEFQYNESDRA
MFFFHAIRYLCGSEKDRSSDLLKNIVIKSFAMGYVPEIPDIALDKHTTRG
QEMGRGSEHFLHEASKVIPQAKVENDYKEQYEEIIKKYDPNHVVPSTFVF
NPWQV
>EF0143 transcriptional regulator, Cro/CI family
MILSHFSTKVVTFFGSRFKAVRGVDLKRYRKELKLKQQELASKLGIERSL
ISKIESGKRVISKELEQKIINVLNLDGGHASVEAKIDFLRIRFKTLDVRT
VIEKLLHMDMNWFTHESRGFYHYTETFSYSSIRIFRNPENVNMGIMLDLS
GEGCRQLEEIFEEDNNRSWTEFFRSLYDDDIFGQGILVDTKITRIDIALD
ELIVKGQENFDLYVLKEKMEQGLVDTTFKNFDFSGGFVYENKKMVNKGLS
LYFGSRQSPLYFNFYQKDYELARKESMSVEEAREKHEIKNRYEIRLSDEK
AFLFVEYFLSSGESLDWLVKEIINQSLTVYDIEDDMKVYCKSWHDVVDKL
EGLKLSVQGEKPSIEKTLRWLSNYLAPSLKMIKEIDNLLGTNELMERIDL
AELKEKHEEIIEMVSVDAKDLLFTNRDNKSVRSYMEREFELEEMYPF
>EF2528 transcriptional regulator, Cro/CI family
MRGVDLKRYRKELKLKQQELASKLGIERSLISKIESGKRVISKELEQKII
DVLNLDGGYASVEAKIDFLRIRFKTLDVRTVVEKLLHMDMNWFTYEPRGF
YHYTETFSYSSIRIFRNPENVNMGIMLDLSGEGCRQLEKIFEEDNKRSWT
EFFRSLYDDDIFGQGVLVDTKITRIDIALDELIVKEQENFDLYVLKEKME
QGLVDTTFKNFDFSGGFAYENKKMVNKGLSLYFGSRQSPLYFNFYQKDYE
LARKESISVEEAREKHEIKNRYEIRLSDEKAFLFVEYFLSSGETLDWLVK
EIINQSLTVYDIEDDMKVYCKAWYDVVDKLEGLKLSVQGEKPSIEKTLRW
LSNYLAPSLKMIKEIDHLLGTNELMERIDLAELKEKHEEIIEMVCVDAKD
LLFTTNQNSSVRSYMEQEFDLEEVYPF
>EF2088 hypothetical protein
MSIGEIITIITFVGGIIGFLIKNYTLLQKLDETVNKLNLLIDQTKEKQGL
VEDEVIKLNEQIKSLWNNLKENNERIRDLERRGK
>EF2129 DNA replication protein, putative
MMNTKVALKQLMATHFITVDVPCPECGGAMTAWKEPTPDTPPRCPPVCME
CGYRSVKKKEATTAKNLYESSLIKKAKDYFLNGSVLTDRKSLHKKISNYY
PSNQESTKAKNISMEFCEKTLLGEIHHLILTGGVGVGKSHLAIGCLNEIL
VKSNYSKKVLFVSYRELLEQLKFAMNDEEARKAITGVAMSEIKAADVVVL
DDIGAELGDFNKRDEKGNLILSRASNFDIDTLTGILESRIDKPTIITSNL
KSKEIKYCYGERIVSRMATHSNGFMHRFTNTKDYRLKTA
>EF2696 MutT/nudix family protein
MVKDMLNYEDFEEKTLQRREIFKGKIIDVFLDDVALPTGGTAKRELVFHS
GAVAMIPLTAEGKIVLVKQFRKPLEQVILEIPAGKIDPGEENQLETTAMR
ELEEETGYRAGQLTYINSMYLSPGFANEKLALYLATDLQKVENPRPQDED
EILELYELTIAEAKAEVAKGTICDAKTLFAIQYWELYLLQRQFKEDTQ
>EF1445 replicase domain protein
MKIIARDRGTGKTTELVKESARTGQYILASNKSHVRAIEQIAKKAGVTIP
YPVTVDEIVSMDRFTCASSIQRDGLLVDEAIMVLSKLIGLKITGATISLE
GEQQC
>EF_A0078 ImpB/MucB/SamB family protein
MNLTFDYTKEPSRDVFCIDVKSFYASVECVERGLDPLKTMLVVMSNSENS
GGLVLAASPMAKKVLGISNVTRKNEVPDHPNLIIVPPRMKLYMKKNQEIN
NLYKRFVSDEDHSVFSVDESFLDVTASLTYFKCDTAYKLAKIIQRVIYNH
MGLYVTIGIGENPLLAKLALDNEAKNAPGFVAEWRYEDVPEKVWPISPLT
EFCGIGNRMAARLKKLGIRSIYDLAHIEPYMLKERFGIMGLQLYAHSWGI
DRSFLGQKAGRPTEKSFGNSQVLPKDYANKEQIKLVLKELSDQVASRLRM
ASCQTTCVSLFVGYSKGQTDKYGQTGWRRQMKVEPSNNTKVLTEHVLRLF
EENYAPGVDVRNLGVSYGRLVWNKNLQLDLFSVPEEQIHETDMYFLIDKI
RQKFGFKALIHASSLMEGATAISRASLVGGHAGGTVGLGTTK
>EF2736 exonuclease
MNFYAFDFETASYDKHSACSIAIVKVENSRIVDEFYTLIKPETPFFWRNT
QIHGIHESDVVNAPKFPEVWQQIQHCFQPNRLVVAHNASFDCSVLAGCLD
YYGLEQPNYLSLCTVKTSRKLFPEFPNHKLNTVCENLNITLNNHHDALED
SRACAEILLQQEQRFGVEPLKKLVLVK
>EF_A0016 transposase, IS6 family
MKNQFKGKQYDYRIIIEAIGLYYHFSLSYRDCAKIMRKFSVGVDHTTIYR
WNKEYGKILYHLWNKRRSLSKSWRIDETYVKVKGQDRYLYRAIDSKGNTL
DMWLRNHRDTVSTKAFFKRLIRVYGQPRSIVTDKYAPSLKAIKELKEEGI
LYQKVKHWKSKYLNNILEQDHRQLKGKLPYGNNFQSTYTAAVTIKGIEVV
SALYKESRREIGLFDFSPWEEIDTLFKSA
>EF1154 DNA replication protein DnaD, putative
MLSIREYLEAGETTISNLLFDHYQKIGLKDDEFLFLLQLFRSQNAGDLFP
DLMAIAETMGKTPDTIYKLLNQLVSRGFIRIETQQNQKGQMMDTYDLLPV
FQKIQLFLQTSKEKQVVANHEDEIKQLYQGFEKEFGRPLSPIELEMIGQW
LNTDHYSPELIRLALREAVLNQAYSLKYIDRILLAWERKNITTKEQVAAD
QKKRKDSMIQNEIEQQGQTQESLPKVTLHNWLNPEDSE
>EF2955 site-specific recombinase, phage integrase family
MTQINKYTKKDGTTAYMFNAYVGRHPKTGKNVYRKRQGFKTKKQAQIALA
EILKDIEENGLDNKPSVLTFKQLYEKWLAQQRLTIKPSSIAVNKRFAEKH
ILPYLGDCKLDEITVIQCQDLVNKWFNQGHKQYSFYRKLTAQIMRYGESM
ELMNTNPMRKTILPKWKEEETKLEYYTKQELNHFFDCLKQYGNFKQLAFF
RLLAFTGCRKSEVLALQWKDLDITNKSVYIGKTVAQDEFYNILTQTPKTA
SSTRSISLDNETLQIMAKWRTIQRSDYFQMGFNTSSEEQYIFTNNHNKLL
SPNVVNIWLNCLIKKYDLPSITPHHFRHTHASLLLQSGVPIKEVAERLGH
TSTAITDRIYSHVMPEEKEKTADKFAQFVGF
>EF_B0060 ImpB/MucB/SamB family protein
MKFDYSKEPRRDVLCIDVKSFYASVECVERGLDPLKTMLIVMSGADNAGG
LVLAASPMAKKVLGISNVTRKDEVPDHPELLIVPPRMNLYMKRNSEINNL
LKRFVADEDHSVFSVDESFIDITASLKYFNCDTAYRLAKIIQRVIYNHMG
LYVTIGIGDNPLLAKLALDNEAKNTPGFVAEWRYENVEEKVWTISPITEF
CGIGKRMAARLKMSGIESIYDLAHADPYILKQRFGVMGLQLYAHSWGIDR
SFLGEKRQVAKEKSFGNSQVLPRDYARRDQIELVLKELSDQVATRLRNSN
CQTECVSIFVGYSKGQVDGLGRSGWRKQLKIARSNNTKVLTEHVLKLFRE
NYVPGMDIRNLGVSFGKLVWDTTLQLDLFSPPEEQIINTQLDFLIDKIRR
KFGFKALIHASSLLDGATAVNRAGLVGGHAGGNTGLGG
>EF2838 DNA replication protein DnaC, putative
MQSASDGFSKMIKTLLYITPDPCPECGGNLYAWRAKNKDGSDRCPPTCME
CGYKARKKAEDLETEKMFNDSLKARAINYLKYSSLYTDKNLINCRFKTYK
TVDTETKLAFEIANRATTEILLNKPIHMILSGKSGVGKSHLAMSTAWEVL
EKSNYDKRCLFISYAELLEQLKFAMNDEQARKEITGSLMAEIKSADLVVL
DDLGAELGVKQIDDRNKSTNFNNDTLNRIVEARQNKATIFTTNLTGKEMS
QAYGERILSRIMSNSQGFVMKIEGTSDKRVAGI
>EF2338 transcriptional regulator, Cro/CI family
MAQRNLDYRLLKDRRNEYGVSQNKLAIACGLSRTYLNLIENGGVTASTKT
MRKIFDQLESFNPDLPLTLLFDYVRIRFSTTDVRKIIQELLHLKFEYMLH
EDYAFYSYQEQYVMGDIVVMLSHEEDKGVLLELKGRGCRQFETFLLAQKR
SWYDFFEDCLKTGGVMKRLDLAINDRVGLLDISDLTKKCQKEECISLFRT
FKSYRSGELLKADEKDGMGNTLYIGSLKSEVYFCLYEKDYEQYIKLGIPL
DQTETKNRFEIRLKNDRAYHAIQDLLKGRSIESTTFSIINRYLRFADKVE
GKRRTNWPLNEQWGRFIGRNRKEIQLTSEPKPYTIERTLNWLGRQVAPTW
KMAKELDRLNQTTYIQDMVRNARLSDQHKKILEQQSMAIENLIV
>EF2446 conserved hypothetical protein
MELQKALKEVREQKIAPVYLLIGTELYLTELFKTTLMKELLTEEDDQFNF
FSFDMEETPLSAAIAEAETIPFFGDYRLVFVENPYFLTAERKTNGVEHDV
NLLLNYLESPSPTTVLVFMASYEKLDERKKITKALKKNATVVDVNPMDEK
AIRQYISQTIESEGYTIRSDAFDLLLQLTDLNLSKIMGELQKLYLYALET
KTITRGAVQELVPKSLEHNVFDLTNEVLSGNSEKAVQLYEDLLLQGEETI
KLNAILLNQIRLFLQTKILAKMGYQQANIADTLKVHPYRVKLALQQVRRF
ELSRLERLYDELVENDYRMKTGQMDKELLFQLFILKLTAQAK
>EF1847 site-specific recombinase, phage integrase family
MENMSRFKKHITATGKITWYFQAFRTTRRGFNSKREAQLAYLEMEKQHRN
KQKRLASNDKFSVVSQKWFEYYRSLNEQKVATYDKREEQVKILNRWIGGK
KLSSLSSEELQKFLFILKEKGIDGVNVGYAKNSLQSLVQVLNMVFNYCKK
KNLINENPMKFVKMPKYQLSLKDLKESVNSLEDKFLTVDELRAFLNYGIV
YEELPMSVLFHVLFYTGCRVSEALALQPQDIDFERNEILFYKQTAVKGKS
KDFRIETTKTVSSARRVPVTPLVMEKLQELIDVLNKTKRNSNFVVDETYL
FVYLDPGKRGVPYRREYVNDHVKRCVERCGINKDFHTHLARHTMASLVAE
YCSWDVLKDRLGHTDSTTSKIYRHLTSTEKLKPLTAFNSLEG
>EF2132 recT protein, putative
MGNELIVSVQNRIQEMQHGEGLRLPTGYSVGNALNSAYLILSDNSKGKSL
LEKCHPTSVSKALLNMAIQGLSPAKNQCYFVPYGDQCTLMRSYFGSVSIL
ERLSNVKKVHAEVIFEGDEFEIGSEDGRTVVTNFKPSFLNRDNPIIGAFA
WVEQTDGIKVYTIMTKKEIYKSWSKAKTKNVQNDYPQEMAKRTVLSRAAK
MFINSSSDNDLLVKAINETTEDEYDNNQPRKDITPNPPNIEKLEKSIFNQ
DENKKIAQDMIDSIDLNQADKDLQEELNIEFPDPSKNYLATGEVNGDVEN
EDGPYPF
>EF1537 integrase/recombinase XerD, putative
MEEQLVDYLHYLQIERGLSNNTRRSYERDLKKYVAFLQEQGLHSWDEVDR
YMITEFLQSLHEEQQASASVIRMISSLRGFHQFLRQERLSEHNPMQHIDS
PKKVQKLPSTLSVDEVTRLIETPDTSKPLGMRNRAILEVMYATGLRVSEL
IEIKLGDLHLSIGLLQTIGKGDKERIIPLGDYAIQWIERYMNEARPQLIK
NHPNETHLFVNHHGEPLSRQGIWKNLKQIVREAQIEKNITPHTLRHSFAT
HLLENGADLRIVQELLGHADISTTQIYTHITKQRMADVYKEHFPRA
>EF2173 ISEf1, transposase
MNDFTTEIVQTLVTKGDLNELFRSHLEKAINTLLRTELTAFLDYEKYDRT
GFNSGNSRNGSYFRSIKTEYGELTLEIPRDRNGEFKQQTLPAYKRTNDTL
ETTIIHLFEKGVTMSEIADLIEKMYGHHYTPQTMSNMTKVLTEEVNAFKS
RALNDKYVAIFMDATYIPLKRQTVSKEAIYIAIGIREDGTKEVLSYAIAP
TESTYVWNELLQDINSRGVQEVLLFITDGLKGMKDTIHQIYPKAKYQHCC
IHVSRNIAHKVRVKDRKEICDDFKAVYQANSKEEANTFLSGMIEKWKKNY
PKVTQSLIENQDLLTFYDFPPSIRRTIYSTNLIESFNKQIKRYSRRKEQF
QNEESLERFLVSIFDTYNQKFLNRSHKGFQQVTDTLVSMFTE
>EF0363 ISEf1, transposase
MNDFTTEIVQTLVTKGDLNELFRSHLEKAINTLLRTELTAFLDYEKYDRT
GFNSGNSRNGSYFRSIKTEYGELTLEIPRDRNGEFKQQTLPAYKRTNDTL
ETTIIHLFEKGVTMSEIADLIEKMYGHHYTPQTMSNMTKVLTEEVNAFKS
RALNDKYVAIFMDATYIPLKRQTVSKEAIYIAIGIREDGTKEVLSYAIAP
TESTYVWNELLQDINSRGVQEVLLFITDGLKGMKDTIHQIYPKAKYQHCC
IHVSRNIAHKVRVKDRKEICDDFKAVYQANSKEEANTFLSGMIEKWKKNY
PKVTQSLIENQDLLTFYDFPPSIRRTIYSTNLIESFNKQIKRYSRRKEQF
QNEESLERFLVSIFDTYNQKFLNRSHKGFQQVTDTLVSMFTE
>EF1454 terminase, small subunit, internal deletion
MARSEKEPSNKTKERYDLFVDCYLQTFNATQSAIKVGYSQKTARQQGHKL
LTNAYIKEKIQLEMKRLRDRMKDEGLRSFSMLLDIAMQTEGKIQDHNEAE
IAIDKIKSELSDLELEMLKANNDLEKVQKAADAIDGRKKEMRSHKRSLLE
QIDSIKKEYFELNLERVVLLNELSKHQSRYLDAKEWEKLQSLKKSIFQDI
LDRGGFKAIDQIQHSGKVDVNPLANLSEEELRRLANGPRAT
>EF2326 group II intron reverse transcriptase maturase
MPVLTSGQQERKSKQRKIRNSEYYDMEGTFDRLYAESKKDKTFNHLMEII
ESEENIKLAYRTIKKNTGSDTSGVDKRTIADLAKLSEEEYVRLIRKQFSN
YHPGPVRRVEIPKPNGKTRPLGIPTIVDRIVQQCILQVMEPICEAKFSEN
SNGFRPNRSAETAIAQCMRLIQVQHLYHVVDLDIKGFFDNISHTKLIRQI
WALGIRDKKLLCIIKEMLKAPVVLPNGEKTYPARGTPQGGILSPLLANIV
LNELDWWIASQWEEMPTKTKFKTRSNAQGTEIKSHAYRALRRSRLKEMHA
VRYADDFKIFCATHEDAVRAYKATELWLKDRLGLEISPDKSKVVNLKRQY
SDFLGFKLKVRKKGKKYVVRSHMSDKAYKKAHEKVSEEVKKLAYSSDDNA
QFMQLQKYNSVVAGLHEYYCISTEVSHDFSRLAFSINKQLRNRLKGDLSK
KGQLRNGFIKEKYGASRQMRFLHGRPVVPLGYVQSKNAQHKRKSINKYTV
KGREQIHKNLAIDTATMLWLMRNPVKGRTIEYADNRISLYAAQYGKCAVT
GIPMNSHDIHCHHKVPVSNGGSDEYANLILVSKAVHILIHASSEPTIEKY
LKSLNLDNKQIEKLNKLRSMAEMPPIIL
>EF0303 phage integrase
MWVEKKKDKKGNITYQYRERYTDPRTGKTQKVTTTLAKNTKQAENAARRE
LEIKIQKILTDYEEEKRLENLIKNEGVIPNDKTLEDMIKEWFDYIQDPKS
KERKKGSTLSGYSYGIDSLLNEFLVIEKDKRIQDLTFDDIQAFYDRMIFD
FEYQKSYIKRFRAIIRGAFTLAYKKRYIKNLDAINLSKIVTPAKTVDDLI
NEQVPRYLEKAEAEQIFQVLNGYNPLYTQILELQFHTGMRFGELIALESK
NFHDGFLLDIHGTYDHATRSHTRGQKVPPKTRKSFRTIELGDAAVQIIKD
RMYHNHFIKNKNSDFLFVTSNDRPYDLGTINSFIASHQIEFNTSTKVSTH
VFRHTHISMLAEKSIPIQVIMDRVGHEDRETTEKIYMHVTKKQKTDLVKT
LNEL
>EF2089 hypothetical protein
MDKIKIWITMDENQMLTDYSFIAKKNYIEIEVNEEPKDYLNWGLRNGKLV
HYPDDLNGLTNNRTTSFVGNVMLNFAVISWALSYIPLIGKVILDYPKYAD
IKAEYGLLGLTDDNMKTFVSYKRITEKQYEEITGNSYKK
>EF1318 hypothetical protein
MDFEQLKETLPDAKPQTFLQAILSQPQEEDAELTFSEEIDEQFVENCKFL
ASPETISETDVEHWREQEFLVVAQSLDGDYLAGTLEQTFVIPSSLYKEDI
EQFDKQLIDFFIAYENKEITSAILPKEL
>EF1141 MutT/nudix family protein
MKTPTFGKREETLTYQTRYAAYIIVSKPENNTMVLVQAPNGAYFLPGGEI
EGTETKEEAIHREVLEELGISVEIGCYLGEADEYFYSNHRQTAYYNPGYF
YVANTWRQLSEPLERTNTLHWVAPEEAVRLLKRGSHRWAVEKWLAAAS
>EF0144 conserved domain protein
MDKELIKKNIKLMDATIEKMIHVMSSIHKLQLSVKELEDSNELTVSYVKR
ECTKLEERVKELRPSISRCVFMYREYVEEFETKLRDRIVTEKFFRIKRFY
GKEVLAFKEFQEKYQNYIPKDIIDIKKQVRQKLEEVGYEIDGAFEGDFTS
WVGVYARPKDKPTYLDPANAEEVVLQEKYSVNGFKQDFSEWFEFEIKDNV
VYGI
>EF0492 hypothetical protein
MRERLKQAQPLVIVLLLVLLTTLGGGYFNEKKENAQIKNQKEKEQQVLKK
TLEEKNGQLNDLSRKIEQLLDEKEDPVNEPLTKAVNALFSLLFDYDSSNK
EQTVAKRKEKATVYATEQGLSGVFPRDADKVVPSVVTVSQLDKAPEIYRT
TQKDTGKEKTALVRLEYSVRIAGSQTQRGNFIYKVTFNEESKKFTTIENL
GEENQ
>EF2283 site-specific recombinase, resolvase family, putative
MREQQNYRAAIYCRLSSEDGADHESMSIGNQRALLAEYVQKQGWEIVDTY
IDDGFSGTNFDRPGFQRMIADIEKGRINLVITKDLSRLGRNYIMCGQYTE
IYFPERHVRYIALNDGVDTLNQTSSMDITPFKHILNDMYAKDISTKIKST
LHTKAKRGEYLGALDPYGYLRHPDDKHKLIINEETAPVVRRMFEMCAAGI
GSKSIATTLNREGILSPTEYTRFRKHNPERDGEFERRSFWTRTYVQFMLK
NEIYVGSMVQGRQYTPSYRSKKREPIPKKDWIVVPNMHEPIVSRELFDEA
QKRMGARKKTIKAKDEPDLFAGLFFCEACGTSMVPKVSQQKYFYYTCGRS
HAIGNLACSAHYINRDTFHQAVLEDIRRNARLFSEDTEKAAQKLMELKCA
DQQKQTAAMKRDLASAKKRLADLDVKLKRTYEDNMSGKLPDHIFAMFIAD
YDTERETLKAKVAELEKALEKVRDAKADIDRFAALIQKYTSFEKLDRFML
HELIDRITIYETPGMGRCRKGKEKRITIYYKFVGTIQ
>EF2839 DnaD domain protein
MAIGGWIKLYRTIQDHWIWENPQYLKWWLDLIFMANHQDRKILFDGELKT
VKVGERITSEKKLSERWEVSRNTVRKFLDLLVKDDMIELSRSRQNGTWYK
VSNYAEYQNFSEIKKQRTEQRREQQAAHQTEQRTEHKQEPKEPKNLRNNN
NNNKGAFIRSIWENNGFGLMSSKTMTDFDYWISDFEKIGASQKEAEQLIV
KAIEIAIDANARNYNYINAILKDWEQRGFKSVEEREAARKQKKTTKKQKS
NTGHSDYDDLGF
>EF1884 transposase, IS116/IS110/IS902 family
MKLFVGLDVSSEKLDACFMTDDSTCSVLKEASYGNSQLGASQIKEYILEF
SQKFEIESLVIGMEATSLYSFHPAMFFKEDLELNQLNLMVSVEQPNKIKK
YRDIFEENKNDQIDAFYIADYFRIQRQVNSIIKEEEYLALQHLTRTRYQL
IKQLVRTKQHFIENIYYKCNTLSKELKAEGGSVLSATLVTLMTEDYTMDQ
LAELSLEEFANLIQKLGKYRFKNPEGIAKAISKAIRSSYRLGKVHQDSVD
IVLGVLAKEIRSLEKLIKDLDKAIDDLVVVLPEYQCLTSIPGIGPVYAAG
ILAEIGPINRFSDESKLAKYAGLYWRQNQSGNSEYENTPMAKRGNRYLRY
YLVEATNSVRRYEPEYHAYYKKKYAETPKHKHKRAIVLTARKFTRLVDTL
LRNHQLYMPPRSVIDK
>EF2449 comEA, competence protein comEA
MDWLKQLPKKWLLLGSGVFMVILITLLVGIYLMVNKELQVDTTMWEETSL
TTTTEVATDATKERAETMIYVDIKGAVKVPGIYQLKNQQRIWDALALAGG
VSEEADTTQVNYAQKVKDQMIIYVPKKGEPVAQSLETLQESAPAQQNQEE
KINLNTATEAELQTISGIGAKKAQEIIRFRDEQGPFKTVEELKNVPGIGE
KTVERLKDMLTVTG
>EF1767 comFA, competence protein F
MEDLHGRKIIIEETERSIQTKLVYLPTMLERSPLTIQCQRCGEVVSKKEN
RLATNVYYCHACIQLGRVTSCQKFCHLPERPNSPRTVFFEWSGQLTKGQQ
AISVELCETAKARENRLVWAVTGAGKTEMLFAVLHQTLQEGGRIALASPR
VDVCLELFPRIQAVFPHEAIALLHGNNQESYRYTKLVICTTHQLLKFHQA
FDLLIVDEVDSFPFVNNEHLYYGVRNARKKRSSLVYLTATPTKELRKLLQ
QKKLAASILPARYHRRPLPVPRRFWVQSWQRLSSKNIKIIAHHLKRLLVR
NSVLLFCPSISLIHQLHALIAERFSDKEVVAVYGSDELRLEKVQAMRQQK
TDILITTTILERGVTFDAVSVIVYGANHRVFTSSTLVQIAGRVDRRQEFN
YGEVLFLHDGETRDMKEAIRQIKQMNRLASKRGMLDGL
>EF2756 dinP, DNA-damage-inducible protein P
MMSELRFPLKKDTSRKIIHIDMDAFFASVEERDHPELVGHPLVIARHPSD
TGGKGVVTTANYIARQYGIHSAMSAQKAYELCPSAIFKPGNYQKYSEISQ
EIREIFRRYTDVIEPVSIDEAYLDVTENKVNSKSAIKIAKMIQYDIWHEL
QLTCSAGVSYNKFLAKLASDFQKPKGLTVVLPEEAEDFLKALPIEDFHGI
GKKTVPKMHELGIFTGADLYKQDEMTLIRLFGKMGYSLYRKVRGIHDAPV
QVTRDRKSVGKEHTYGTPLTTEEQVTAQLRQLAAGVERALQRVQKHGKTV
VLKVRYTDYTTITKRVTLPEYISKKEELFYQANLIWEDILGLEQGIRLLG
ITLTNLDPLAYENIVLPLWEKS
>EF0001 dnaA, chromosomal replication initiator protein DnaA
MPDVESFWHSLEEAYQAILSAPSFDAWIKTTRPLKLDNNQLWLEVPSAVH
RDYWEKNLSAKIVETGFKLTGAEVMPHFVVADEKDAALAQELEEPAEEEV
VFSEQSKKAMLNPKYTFDTFVIGKGNQMAHAAALVVAEDPGSIYNPLFFY
GGVGLGKTHLMHAIGHQMLVNQPDAKVKYVSSETFTNEFINSIQTKTSEQ
FRKEYRNVDLLLVDDIQFLAEKEATLEEFFHTFNDLYNENKQIVLTSDRP
PNDIPKLPERLVSRFAWGLSVDITPPDLETRIAILRKKADAERLEIPDDT
LSYIAGQIDSNIRELEGALVRVQAFATINGEDITTSLAADALKSLKSVGS
KNQLSILQIQEEVSKYYHVPLKDLKGKKRVKTIVVPRQISMYLAREMTDN
SLPKIGAEFGGKDHTTVIHAHEKIQQLLEKDPAIQKEVSEIKNLLNS
>EF0013 dnaB, replicative DNA helicase
MNELLQDRVPPQNIEAEQAVLGSIFLDADVLIEAMEYVEPKDFYRRSHQL
IFQTMMTLSDRNEAIDVVTIKDRLEQENLLEDVGGLSYLSDLALAVPTAA
NVIYYAKIVEQKSLLRNLIQTATEIVTKGFEQGEDVESILDDAERSILEV
SEKRNRSGFLSISDVLNTTIANIDQLYQNDEEITGLPTGYQALDKMTAGL
QAEELIILAARPAVGKTAFALNIAQNVGTKTDKAVAIFSLEMGAESLVNR
MLCAEGSIEASHLRTGQLSEEEWQNLIIAMGSLSRANIYIDDTPGIKITE
IRAKCRKLAQEKGNLGLILIDYLQLIEGTGKENRQQEVSDISRQLKKLAK
ELKVPVIALSQLSRGVEQRQDKRPVLSDIRESGSIEQDADIVAFLYRDDY
YDRGEGEDGDHEPPEVDNVVEVIIEKNRSGARGTVELLFIKEYNKFSSLS
PRTEF
>EF1044 dnaE, DNA polymerase III, alpha subunit
MSFPQLHTVTSYSLLSSTVRIRSYVKQAKALGYQTLAITDINVLHGAVEF
YEACQEAGIQPIIGLRLEYTPAEKEGHSELLLFAKNLKGYQQLMQLSSSK
MTTEGPFYLAEHQSLLSDLFAVTLSAKGEVAQTFFEDEQQAVHAFQQLAS
YFDPQSLFVEHSFSMNQQRNPALFSFYQREQLPGVALQEVRHLTREEGFA
VTVLESIKENNQLNITSQTPEIEGLNYLREAETTMEQMLQIAGAEVVQNT
IQLAENCRVDIPLHQKLLPHFPVPDNQTAGSYLRTLCLEKLPERVPHLNE
VYQKRLEKELTIIHNMGFDDYFLIVWDVMDFCHNNQIVTGAGRGSAAGSL
VSYVLSITDVDPIKYDLLFERFLNPERYTMPDIDLDIPDNRREEVLAYVS
QKYGHYHMAQIATFGTMAAKMVLRDVARVFGLSQSEANRWSAAVPNKLKI
TLEEAYQESKRMQELVNFSPNNQLLYKTAVQLEGLPRHVSTHAAGVVISD
ENLLNLVPLQPGSNEILLTQFTMNDVEKIGLLKMDFLGLRNLSIIDDTLT
AVKRVYNRTIRLNQIPLDDETTLALFRKGETSGVFQFESAGIRNVLRKLG
PTSIEDIAAVNALYRPGPMQNIDVFIRRKKGLEQISYPEPSLAPILENTY
GIIVYQEQIMQVAAKMAGFSLGQADILRRAISKKKKDVLDEERNHFVNGA
LQQGYPQETANQVYDYIERFANYGFNRSHAFAYSFIGFQMAYLKVHYPSA
FYVALLHSVRHNPTKIKEYIGEARKNKQTILQPSINQSHYSFYLNQQQQI
LFGFSSLKGIRRDFIQNILNERRENGPYKTFDEFLLRIDRKWLKVENIEP
LIAIGAFDEIAPNRRQLAVGLESNIQSILLSGGSMDLLETLKPKEEEIAD
YPLEERLEQEEQYLGVYLSGHPTEEFKKTRLAKQTQLVHELVENQPTKLL
IYVKNIRTIRTKKGEQMAFVDGDDTTGSISLTLFPTVFRQLRQSVEKGQV
YYVEGKVERSTYNQELQILVQRIEKAQQVETSISDETCFIRITKDVEQTD
VFQKMKEVLSRHAGHIPVIVYFEKTGKKIVLNEENWVAHTSASQQQLAYV
LGEQNVIFK
>EF1521 dnaG, DNA primase
MAQRIPQEVIEEVRHRTNIVDIIGQYVQLKKSGKNYMGLCPFHEERSPSF
SVAEDKQIFHCFGCGKGGTVFNFLQEIEGISFPESVKRVADLEHLSVDFD
WSEPREVADTPENQQRRSLLQLHSKAAELYHHILVNTKIGEPALNYLLER
GLTQELIETFQIGFAPQKRDFLSQVFKNEQLDETLFEPSGLFVQRDNGTF
LDRFYQRIMFPINDPQGNVIAFSGRLLKTADFPGDEMPKYLNSPETTLFN
KRETLFNFDRARKEIRKENTVLLFEGFMDVIAAWQSGVKSGVASMGTSLT
NEQIRRLERVAKEVVICYDGDNAGVQATNRAIQLLQENSHFDLSIVSIPE
KLDPDEYVRKYGAEAFQNLANHGRETVFSFKMNYHRLTRNMNNEKEQLDY
VNELLRELTNVQSPLERDRYLNQIAQEFQLSVHSLEEQFNQLKQEQRSVQ
RQERQQFYQDEMMPPPMEEPVFEENHVQNKLPLTQVQKAERSLLFRLMNE
QGVRQTIQQLPDFSFAHDEYQELYFLLESYATLHQSFDIADFINFLQDNQ
TKQLAIEIAYQNLSEESSEREVADLLHVIALSSIAEAIEQKKIQQQEAKR
VGNQQLEAELTMEIIQLARQLKAQRTFT
>EF0883 dnaI, primosomal protein DnaI
MMEDVGKEMSKIIQKRDINERYEELVNEVLKDQDVQAFIQANRERLTDED
IRKSYAKLYEFVQEKKKFQVNDPAMIAPGYEPRLMLNFHYIDVTYVPTAD
LIARQKEEEIRNRVRAMDMPKDVREANLRDFDPSSQGRAKALAEAMQFLR
EYPATPKEFHKGLYLQGPFGVGKSFLLGAMANALAERGFTTTIVHFPTFT
VEMKQAIGRDQVGEKLDAVKKSPILMIDDIGAESMTSWIRDDVLSVILQY
RMQEQLVTFFSSNLDLKALEEHLTVTQRGEQEPLKARRIMERVRYLSKEI
TMTGNDRRNG
>EF0002 dnaN, DNA polymerase III, beta subunit
MKLTVKRSVFLQELQTVQRAISSKTTIPILTGVKIVLSEDGLSLTGSNAD
ISIESFLSKDDEKAQMTIERTGSIVLQSRFFGEIIRKLPEDMFTMEVLDN
NQVAITSGKADFTVNGLDADNYPHLPVIDTQNQMKLPVHLLTKIISETGF
AVSMHESRPILTGVHFILENQKLLAVATDSHRLSQRVIPTEQAVEDFNIV
IPGKSLTELSRSLTNEEEMVEISIMENQVLFKTETMYFYSRLLEGNYPDT
NRLIPTSHNTQIEFYVPELLSAIERASLLSHEGRNNIVRLSISPDSVVLY
GNSPEIGKVEEALNYENVSGEALDISFNPDYMKDALRAFGDMNITVKFLS
PIRPFTLEPTETELDFIQLITPVRTN
>EF0053 dnaQ, DNA polymerase III, epsilon subunit
MQTEVKEFIAFDIETTGLDFHQDAVIQISAARYVDGIEVDYFDTLVNSDY
IPDEITKLTGITNDQVLNAPTLDEVMPYLFDYLGDTILVGHNIKSFDFPF
LKAKGYNIAEGHEIYDTRYFAATRKHGAVNNQLTTLKLLFGIDAISHNAL
NDVRISAIVFMELLKIEPQEKSSTLKKSSLDSFELDDDTTPFFEGMSFVV
TGAFDDSKYNRKQIETLIKQHGGRVSSSLSAKTDYFIQGIQISSQLKDGK
HSSKELKYIELREKGVDIYKFNGNQFYELITNYRKLRKN
>EF2781 dnaX, DNA polymerase III, gamma and tau subunits
MAYQALYRVWRSQRFDDVVGQKAITQTLKNAIVQKKTSHAYLFTGPRGTG
KTSAAKIFAKAINCKHSQDGEPCNVCETCVAITEGRLNDVIEIDAASNNG
VEEIRDIRDKAKYAPTQAEYKVYIIDEVHMLSTGAFNALLKTLEEPPQNV
IFILATTEPHKIPLTIISRTQRFDFKRISTQDIVDHMAHIMQEMALDYEE
QALYVIGRAAEGGMRDALSILDQTISFSDEKVTLEDAMQVTGSLTYEMMD
HYIQCCVAGDVERALEGLESILGEGKEARRFLEDLLLYCRDLLMYQQAPK
LLAEKAGTLTEAFKELATQTPAEKIYQLIQILSDTQNEIRFTNNANIYLE
VATVKLAKTVQPNKHNTPETANQDGSAEGNPELADLQNQIGQLKKELAEL
KKHGVAAKEADAPRQQARPQAPKSSFRVPTERVYQVLNEATRTHLMNVKN
VWEDLLQTLSVTQRAMLKASEPVAASPKGIVVAFDYEIVCARATDDEEMQ
LAFNNNLSRLMDYTPEMVCITRESWPKLRQSFINQNQGSLNHSEPENEMA
RLADEPPVTNEHSQENPVVDEAIAMFGEELVEVLDD
>EF1032 drrC, daunorubicin resistance protein
MEWIEIKHATQNNLKNISVNIPKKQLTVVTGLSGSGKSSLVFDTLAAESR
RELNDTFSSFVQNYLPKYGRPEVEKIENLPVAIVIDQKKVAGNSRSTVGT
YTDIYTFLRLLFSRAGSPFVGYSDTFSFNHPDGKCPTCDGLGKITEINLH
QLVDYDKSLNKGPIDFPTFTVGNWRWKRYAHSGLFDLDKKIKDYSPEELA
LFLYAPQQKLANPPKEWPHTALYEGIVPRMQRSILHTDEGKRHQKYLNHF
VTVKRCPDCLGSRVNERVRSCKINQKSIADAVDMPLTELHSFIRSMDLSL
IKTIQEELLVRLEALINIGLSYLTLGRATETLSGGEAQRIKIAKYVNSAL
NDIMYILDEPSAGLHPKDIERISRALLNLKNKGNTVVLVEHNPQLIREAD
FIIDIGPFAGENGGHVQFSGTYDAFLVSKTLTSQALQEPLPLNDQPRKAR
KSLSIEHATLHNLNNLSVEVPLGVLTVICGVAGSGKSSLAEEIYQKAQAD
NQEIIHLSQKSITANLRSTPMTYLNIFDKVRKLFAEENHVSPALFSYNSK
GACPTCKGKGIIVSDMSFMEDVTSICETCHGTRYKEEVLHYLYNGKNIVE
VLALSVKDGYDFFKDQPFALSLKNLLEVGLSYLKLNQSLSTLSGGELQRV
KLADTLHQKKAIYLMDEPTDGLHLIDIQQSLQLFNRMVEEGNSLILLEHH
IDVIKSADWLIELGPEGGKNGGQLLFTGTPANMLNSTHSITKGYL
>EF1728 ebsB, EbsB protein
MLRIYVDAATKGNPGESGGGIVYLTDQSRQQLHVPLGIVSNHEAEFKVLI
EALKKAIANEDNQQTVLLHSDSKIVVQTIEKNYAKNEKYQPYLAEYQQLE
KNFPLLLIEWLPESQNKAADMLARQALQKFYPNKK
>EF2735 exoA, exodeoxyribonuclease
MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLELPGY
HQYWSYAEKKGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEFF
MVTCYTPNSQAELKRLAYRMTWEDAFRAYLNELNQEKPVILCGDLNVAHQ
NIDLKNWKTNQKNAGFTPEERQKFTELLDSGFTDTFRYFYPEAEGIYSWW
SYRFNARKNNAGWRIDYFVVSESLNERLVSAKIHTDILGSDHCPVEVVLD
F
>EF0879 fpg, formamidopyrimidine-DNA glycosylase
MPELPEVETVRKGLEKLVVGKTIQEVIVFWPRIIESPEVDVFQGQLAGQT
IEGIERRGKFLIFKLSDNDMISHLRMEGKYEFHQADDEIAKHTHVMFTFT
DGTQLRYLDVRKFGRMTLVPKNQGHQYKGILALGPEPTPDVFQLATFQQG
LKKHHKAIKPLLLDQKLVTGLGNIYVDEALWQAQIHPEQPADSLKPAEVA
TLYQAIIDVLARAVEAGGTTIRTYLNALGEAGTFQVALNVYGQTGLPCNR
CGTPIVKTKVAQRGTHYCPQCQQLKGRRLK
>EF0006 gyrA, DNA gyrase, A subunit
MSEEIKENIQDVNLTSEMKESFIDYAMSVIVARALPDVRDGLKPVHRRIL
YGMNELGVTPDKPHKKSARIVGDVMGKYHPHGDSAIYESMVRMAQPFSYR
AMLVDGHGNFGSVDGDGAAAMRYTEARMSKIALEMLRDINKNTVDFQGNY
DDSEQEPVVLPARFPNLLVNGTTGIAVGMATNIPPHNLSEVIDATSLLMD
NPDVTTNELMEVLPGPDFPTGGLVMGKSGIRRAYETGKGSITVRAKVELT
EMPNGKERILVTELPYMVNKAKLIERISELHRDKRIEGITDLRDESSREG
MRIVIDVRRDVSASVVLNNLYKMTALQTSFGFNMLAIEKGVPKILSLKRI
LENYVEHQKEVITRRTIFDKNKAEARAHILEGLRIALDHIDEIIAIIRGS
QSDDEAKATLIERFEFSDRQAQAILDMRLRRLTGLERDKIENEYQELLKF
IADLEDILARPERVIEIIKTELNDVRTKFGDARRTELLVGEVLSLEDEDL
IEEEEVVITLTNNGYIKRMANSEFRAQRRGGRGVQGMGVHDDDFVKNLVS
CSTHDTLLFFTNTGKVYRAKGYEIPEYGRTAKGIPVINLLGIDSAEKIQA
IISVEGKAEAGKYLFFTTLKGTVKRTAVTAFSNIRSNGLIAISLKEDDEL
VNVVTTNGNQKMIIGTHAGYSVTFDENTVRDMGRTASGVRGIRLRENDYV
VGAAILDENKEVLVITENGYGKRTKASEYPVKGRGGKGIKTANITEKNGP
LAGLTTVNGDEDILLITNKGVIIRFNVDSVSQTGRATLGVRLMRMEDGAK
VVTMAVVEPEEVEEEIVEVVETTENETTSETEE
>EF0005 gyrB, DNA gyrase, B subunit
MRERAQEYDASQIQVLEGLEAVRKRPGMYIGSTSGEGLHHLVWEIVDNSI
DEALAGFAKSIQVIIEPDDSITVIDDGRGIPVGIQAKTGRPAVETVFTVL
HAGGKFGGGGYKVSGGLHGVGSSVVNALSTSLDVRVYKDGKVYYQEYRRG
AVVDDLKVIEETDRHGTTVHFIPDPEIFTETTVYDFDKLATRVRELAFLN
RGLHISIEDRREGQEDKKEYHYEGGIKSYVEHLNANKDVIFPEPIFIEGE
QQDITVEVSMQYTDGYHSNILSFANNIHTYEGGTHESGFKTSLTRVINDY
ARKQKLMKENDEKLTGEDVREGLTAVVSIKHPDPQFEGQTKTKLGNSEVR
TVTDRLFSEYFTKFLMENPTVGKQIVEKGMLASKARLAAKRAREVTRRKG
ALEISNLPGKLADCSSKDPEKCELFIVEGDSAGGSAKQGRSREFQAILPI
RGKILNVEKASMDKILANEEIRSLFTAMGTGFGEDFDVSKARYHKLVIMT
DADVDGAHIRTLLLTLFYRFMRPIVEAGYVYIAQPPLYGVKQGKNITYVQ
PGKHAEEELAKVLEELPASPKPSVQRYKGLGEMDDHQLWETTMDPEKRLM
ARVSVDDAIEADQIFEMLMGDRVEPRRAFIEENAHYVKNLDI
>EF3167 hexA, DNA mismatch repair protein HexA
MPQKTKNTPMMEQYLSIKAQYKDAFLFYRLGDFYELFYEDAINAAQILEL
TLTSRNRNADDPIPMCGVPYHAAQGYIDTLIEQGYKVAICEQVEDPKTTK
GMVKREVVQLVTPGTVMNSKGLEAKDNNYLTAVLTDGNQFGFAYVDLSTG
ELKTAVLADEEGVLNEASALQTKEMVLGSGIPESLKENLSLRLNIIFSTQ
ETVEENAEFSFLTNELINPLEIEITGKLLSYLSVTQKRSLSHIQKAVEYQ
PDHFLKMDHYSKFNLELSQSIRTGQKKGTLLWLLDETKTAMGGRLLKQWL
DRPLIQERQIKARQEMVQSLLNAYFERLDLQAALTNVYDLERLAGRVAFG
SVNGRDLIQLRTSLEQVPTIRQLIVGINQGEWDDLLVDLNPVEDLVALIA
TAINEEAPLQITEGKVIKDGYNDQLDEYRDAMRNGKQWLAELEAKERQET
GIKNLKIGYNRVFGYFIEITKSNLANLEEGKYERKQTLANAERFITPELK
ELERLILEAEEKSVELEYQLFLAVREQVKTNIDRLQTLAKTISAVDVLQS
FATISERYQYVRPTLRSNTKNLAIVEGRHPVVEKVLGHQEYIPNSIRMNP
ETDILLITGPNMSGKSTYMRQLALTVVMAQIGCFVPAESAEMPIFDQIFT
RIGASDDLIAGQSTFMVEMMEANQALRHATPNSLILFDELGRGTATYDGM
ALAQAIIEYIHREVQAKTLFSTHYHELTVLDETLKGLKNIHVGAVEKDGE
VVFLHKMMEGPADKSYGIHVAKIAGLPSPLLERAATILSALEAEETTIPI
SVHHEEVSEVHEETEQLSLFKEVSTEELSVIDTLKKMNLLEMTPLDALNM
LHQLQKRI
>EF3166 hexB, DNA mismatch repair protein HexB
MGKIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEA
GLKTIQIIDNGEGIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEAL
PSIASVSEMIVETATAEEEEGSYVILKGGKVEENRPAALRKGTKMTVSNL
FYNTPARLKYVKTIQTELANIGDIVNRLALSHPKVAFRLVHDGHKMMSTT
GNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSLPEVTRASRNYL
STIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNVH
PTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLRFKKKLPPEPK
AEQMEIPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVN
QTERAVDPMDDPFAPPVPESTSVAEETSAYETSSAAADSANHWETASNEQ
QVIAEETKITEVPDSEPSLRSSEAADEVFQEEMKLHPEFDANSAASQREL
KQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQERI
KYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLE
DFGQNSFIVRAHPTWYPAGEEESIVREMIDMLLTTGSVSVKKFREATAIM
MSCKRSIKANHYLNEQQARVLLKDLALCENPFNCPHGRPVLIHFTNSDME
RMFKRIQDPH
>EF2762 holB, DNA polymerase III, delta prime subunit
MNEAQQLQQMQPLLYKQLQKSFEHGRLAHAYLFEGDTGTGKQEFGLWMAK
HVFCTNLVNQQPCNECHNCVRINENEHPDVLRIAPDGQTIKVNQIRELKA
EFSKSGVETAKKVFLIQEADKMSTGAANSLLKFLEEPEGQILAILETTSL
SRILPTIQSRCQTLHFQPLVKKTLIDRLIKQGIGEKTATLLAELTNSFEK
AVEISQDEWFNEAREIILQWFNYLKSNDLQAFIYVQKKMVKVFKEKEQQA
LSFDLLMVYYRQLLEESVATQQAKKVTEEQAERLALILKARQKWTANVSW
QNVCEQLVIQMIHPKS
>EF1550 hup, DNA-binding protein HU
MANKAELIENVASSTGLTKKDATAAVDAVFSTIQETLAKGEKVQLIGFGN
FEVRERAARKGRNPQTGQEIQIAASKVPAFKPGKALKDAVK
>EF0722 ligA, DNA ligase, NAD-dependent
MEQQPLTLTAATTRAQELRKQLNQYSHEYYVKDQPSVEDYVYDRLYKELV
DIETEFPDLITPDSPTQRVGGKVLSGFEKAPHDIPMYSLNDGFSKEDIFA
FDERVRKAIGKPVAYCCELKIDGLAISLRYENGVFVRGATRGDGTVGENI
TENLRTVRSVPMRLTEPISVEVRGECYMPKQSFVALNEEREENGQDIFAN
PRNAAAGSLRQLDTKIVAKRNLNTFLYTVADFGPMKAKTQFEALEELSAI
GFRTNPERQLCQSIDEVWAYIEEYHEKRSTLPYEIDGIVIKVNEFALQDE
LGFTVKAPRWAIAYKFPPEEAETVVEDIEWTIGRTGVVTPTAVMAPVRVA
GTTVSRASLHNADFIQMKDIRLNDHVIIYKAGDIIPEVAQVLVEKRAADS
QPYEMPTHCPICHSELVHLDEEVALRCINPKCPAQIKEGLNHFVSRNAMN
IDGLGPRVLAQMYDKGLVKDVADLYFLTEEQLMTLDKIKEKSANNIYTAI
QGSKENSVERLIFGLGIRHVGAKAAKILAEHFGDLPTLSRATAEEIVALD
SIGETIADSVVTYFENEEVHELMAELEKAQVNLTYKGLRTEQLAEVESPF
KDKTVVLTGKLAQYTREEAKEKIENLGGKVTGSVSKKTDIVVAGEDAGSK
LTKAESLGVTVWNEQEMVDALDASHF
>EF0257 mfd, transcription-repair coupling factor
MENSRKEGPCLNIIERISQTEIAKSWRSQLMTTGTRQLITGLSGSAKTLL
MAGALQKTHQKIVIAVPNLYYANQLVDDFLNILPSEQVHLFPVDEVLSAE
MAFSSPEARADRVSALNFLMTANAGIVVVPVAGLRKYLPTKETWQNAQLY
WEIGTEVEPEILAQRLVLMGYERQAMVGKPGEFSIRGSIVDVYPLNAEYP
VRVELFDVEIDSIRYFEADTQRSLENLEEVTISPMTDLVFSKADMNHGMT
RLQDALEKRLATAKDQTETDFLEEYFGQLLSSWEQGIPTENAHYYTDFLY
QQKTTLLDYLPENSLLFVDDYSRMMETEREIAREEAEWQTLKIEEMRVFS
EQTFGVDFHDQLRKTARNTTFFSLFQKGMGNLRFQEVHNFQYRSMQQFFG
QMPLLKAEVDRWQKQNQTVVVFVPTKERIQKVEELFQDFDIPSVVSNWDQ
LLDGHVQIVQGALQTGFELPKNKLVAITEKEIFHTTTKKRARRQTISNAE
RLKSYSDLKTGDYVVHANHGIGKYIGMETLEVDGVHQDYMTILYQNDDKL
FIPVTQLNLIQKFVASESKTPKINKLGGSEWTKTKRKVASKIEDIADDLI
LLYATRESEKGYAFPPDDAYQKEFEEAFPYSETDDQLRSAAEIKHDMEKS
RPMDRLLVGDVGFGKTEVALRAAFKAVSNNKQVAFLVPTTILAQQHYETI
QERFEGFPVEIGLLSRFRTKKQQNETIEKIKHGQVDIVIGTHRLLSQDIN
FSDLGLLIIDEEQRFGVKHKERLKQLRSQVDVLTLTATPIPRTLHMSMLG
VRDLSVIETPPENRYPIQTYVMENNPGAIREAIEREMARDGQVFYLYNRV
DTIERKVEELQALVPDARIAYAHGQMTEVQLENTLFDFIEGQYDILVTTT
IIETGVDIPNANTLFVENADYMGLSTLYQLRGRVGRSNRVAYAYFMYEQQ
KILNEVSEKRLEAIKDFTELGSGFKIAMRDLSIRGAGNLLGAQQHGFIDS
VGFDMYSQMLSEAVARKQGKNIQDQKTSVEIDLGIDAYIPGTYITDERQK
IEIYKRIRQLENMDMYEELEADLLDRFGEYPDEVAHLLTTGRIKMDGDRA
LLESIRKRDQKVKFVLSKIGTKTYSVEQLFEALSATSLKADLAVEKEQMT
ISLKLPKDCKEAVWIQEIAAFTTALRQEKYKHSQGTDSL
>EF2704 mutY, A/G-specific adenine glycosylase
MTNKEPWEAWSPAKVSSFQEDFLAWYEREKRNLPWRANTDAYRIWISEIM
LQQTRVDTVIDYFYRFMEWFPTIQDLAEAPDDKLLKAWEGLGYYSRARNL
KVAAQQIVSEFGGKMPDTIEDIRSLKGIGPYTAGAIGSIAFNLREPAIDG
NVMRVVSRLFEIDADIAKASSRKVFEAAMLKIIDRERPGDFNQALMDLGS
AVCTPTSPKCESCPLQQYCAAYQADKMTAYPVKSKKVKPKDVYYVGTIIE
NKKQEFLLEQRPETGLLANMWLFPIEEISKKQFQQLQKLAQPAETEKQLT
LELEPVTEPLVAEEPVNFFTDYETVVWQKRTLGEVVHIFSHLKWHILVFY
GRNTGELATLESQRWVAAQQFSDYVFPKPQQKMVELFKKEHEKK
>EF1736 nfo, endonuclease IV
MLLGSHVSMSGKKMLLGSAEEAASYGSTTFMIYTGAPQNTRRKPIEEMNI
EAGQAFMKEHNLSNIVVHAPYIINLGNTIKTENFGFAVDFLRQEIERAQA
LGATQITLHPGAHVGAGPEAGIKQIVKGLNEVLWKEQIPQIALETMAGKG
TEIGRTFDELAAIIDGVTLNDKLSVTLDTCHINDAGYNVKDDFDGVLVEF
DKIIGLDRLKVIHVNDSKNPMGSHKDRHANIGFGTIGFEALNGVVHHEKL
TALPKILETPYVGEDKKNKKAPYGFEIAMLKNQTFDPELLEKIQGQN
>EF1155 nth, endonuclease III
MLSKEKTMEAIEIMYEMFPNAECELKHKNPFELLIAVILSAQATDVSVNK
ATPGLFAAFPTPEALAAAPVEEIIAKIKTIGLYRNKAKNIKACAQQLLER
FNGEVPQTRDELVSLPGVGRKTANVVMGDAFGEPAFAVDTHVERVSKRLR
ICKLNANVTEVEQTLMRKVPKELWVKTHHTMIFFGRYHCLARAPKCEACP
LLYMCQEGKERMKGK
>EF0511 nuc-1, thermonuclease precursor
MKKLIGKKWLLLTAVATFLLSGCASLEQKAQDSVKEVTENVTQTISNDQR
IPADFVRHVDGDTTVLKIDGKEQKVRFLLIDTPETVKPKTKVQPFGLEAS
KRTKELLSTASEITFEYDKGDKTDRYGRALGYIFVDGTLLQKTLVSEGLA
RVAYVKEPTTKYLAELEQAQEQAKNESLGIWSIPGYVTQRGFSK
>EF_B0045 nuc-2, thermonuclease precursor
MKLFIGKKWLLLTAATLLLSGCASLEQKAQDISNDGTGNFTQTISNDNRI
PAEFVRHVDGDTTVLRIDGKEQKVRFLLVDTPETVKPKTKVQPFGLEASN
RTKELLSTASEITFEYDKGDRTDRYGRTLGYIFVDGMLLQETLVRDGLAR
VAYVKEPNTKYLLELEEAQEKAKNESLRIWSIPGYVTERGFK
>EF0277 ogt, methylated-DNA--protein-cysteineS-methyltransferase
MTDAGLAFVGSANQSIEELKNWYPQAQLEASEKKTAPYKEALISYLNQHS
TTFACPIDIEGTPFQKEVWQALQEIPYGVTMTYQEISEKIGRPRAVRAVG
TAIGKNPLLMVIPCHRVIGSKGQLTGYRGGLAMKQALLTFEQS
>EF1614 parC, DNA topoisomerase IV, A subunit
MEKRQEVQELTLEEVMGDRFGRYSKYIIQERALPDIRDGLKPVQRRILFS
MNKDGNTFDKGFRKSAKSVGNIMGNYHPHGDSSIYEAMVRLSQDWKLREV
LIEMHGNNGSMDGDPPAAMRYTEARLSQLSGELLKDIDKNTVDFVWNFDD
TEKEPTVLPAKYPNLLVNGSTGISAGYATEIPTHNLAEIIDGTVYLIDHP
NASLEKLMEYIPGPDFPTGGILQGKAEIKKAYETGRGKVILRAKTKIEPL
KGGKQQIVISEIPYEVNKATLVKKMDEIRLNKKVDGIAEVRDESDRTGLQ
IVVELKKDVNAEGILNYLFKNTELQINYNFNMVAIDNMTPQQVGLKRILE
SYITHRKSVIINRCQFELDKARKREHIVAGLIKALSILDKVIATIRGSKD
KKDAKKNLVSDYAFTEEQAEAIVTLQLYRLTNTDITDLQEEAKTLEQQIA
ELLNILNNEKELFSVMKKELREVKKQYGNPRLTQIEEEIQEIKIETAVLV
AQEDVVVTVTHEGYIKRSSIRSYTASKPEEIGMKEGDFLLYAGEVNTLDH
LLLVTNKGNMIYRPVHELPDLRWKEIGEHISQTILNLAIDESIIAVYPYK
ELSPTKTFVFITKAGMIKQTKMADFEPWRTYKSRPTSCMKLKSDQDEITN
VYLTNDQDLLDVFLVSNRGFGLRYPLYEVPVVGSKAAGVKSMNLKEDDYV
VNGLLVHSEGDTPIVIVTQRGGVKRMLAQELTQLGRAKRGLMVLRELKKN
PHRVVFMSESTDLDLLVTTQKGTQEVIQSKNYPISERTSNGSFVIDEQKD
GQVMEVHEMHSAVIEEEQTN
>EF1615 parE, DNA topoisomerase IV, B subunit
MAKKINNEYNDASIQVLEGLEAVRKRPGMYIGSTDSRGLHHLVYEIVDNA
VDEALSGYGNEINVTIQKDNSICVADSGRGMPTGMHASGIPTVEVIFTVL
HAGGKFGQGGYKTSGGLHGVGASVVNALSKWLEVHIVRDGVEYMERFEDG
GKPVGTLKKIGKTKKRNGTSVTFLPDDTIFSTTNFSYEILAERLRESAFL
LKGVKITLTDERGEEPKEEVFHYEEGIKEFVAYLNEEKDTLTPVVYFSGA
KEGIEVELAYQYNDGYSENVLSFVNNVRTKDGGTHEVGMKTSMTKAYNEY
ARKVGLLKEKDKNLEGSDFREGLAAVLSIRVPENLLQFEGQTKGKLGTPL
ARTVVDNVVGEQMGFYLQENSEMSQSLIRKAIKAREAREAARKAREESRN
GKKRKKGESLLSGKLTPAQSRNPKKNELYLVEGDSAGGSAKQGRDRKFQA
ILPLRGKVINTEKAKMQDILKNEEINTMIYTIGAGVGPEFSIEDCNYDKI
IIMTDADTDGAHIQVLLLTFFYRYMKPLIEAGKVYIALPPLYKVSKGTGK
KSVIEYAWTDGELAEVIDKVGKGYMLQRYKGLGEMNAEQLWETTMDPETR
TLIRVRIDDAAQAERRVTTLMGDKVEPRRKWIEQHVQFTLEEDGSILDRS
EEDTSAPTGESLLDAEKTKEAEQTDDTEISLFDIE
>EF0721 pcrA, ATP-dependent DNA helicase PcrA
MTQKHALVQGMNPRQEEAVLHTEGPLLVMAGAGSGKTRVLTHRIAYLIEE
KEVNPWNILAITFTNKAAKEMKERVNKLLETGGEDVWVSTFHSMCVRILR
RDVDQIGYNRNFTIIDPSEQKTLMKRILNDLNIDSKKYDPRSILGTISNA
KNELQTPEKVAEMQGSLYEEIVAKCYEAYQKELRKNQCMDFDDLIMNTIR
LFNEQPDTLAFYQNKFHYIHVDEYQDTNHAQYTLVNLLAARFKNLCVVGD
ADQSIYGWRGADMQNILDFEKDYPDASVILLEQNYRSTKNILAAANDVIK
NNRNRREKELWTENIDGEKIVYYRGDTERDETQFIVSQIQKEMRENDRIY
GDFAVLYRTNAQSRVVEEMLLKSNIPYTMVGGHKFYDRKEIKDILAYLSL
IANPDDSISFERIVNEPKRGIGKSSIEKLRLFADTHGWALLEAAQNVDLA
NISGKAGKELGNFGMMIQDLTKTVPYLTITELVKETLQRSGYREALMAQN
NLESQARLENLDEFLSVTQEFDKRFEAQNNDDPNGEETKLADFLTDLALV
SDLDNLEESSSQVTLMTLHAAKGLEFPVVFLMGLEEGVFPLSRAMLEESE
LEEERRLAYVGITRAEEALFLTNAYSRTLYGRTQYNRPSRFLEEIEAERL
MKQGAAANLQKAPARTFDPKVFKPSASKPAYTQPATKSVSNKVASGGEKV
SWQAGDKVQHKAWGVGTVVRVGGSAKDLELDIAFPEKGIKRLLAAFAPIE
KI
>EF1598 phrB, deoxyribodipyrimidine photolyase
MKRVIWFRRDLRLQDNKALAHALQNSAADELILLFQMNPQQFIQESANHN
AFFASLASFKERIDQEAHLQIMVGEPLDLFSRLKRKLPDWQAIYFNEDTC
GFGAKRDQQAMRFFEENNIQSFSFQDAYLHGSEEIKKNDGSKYQVFTPYY
NKWKEAPKETPIPVSYTAEKIFSACLFPEEEAAYREQIARIPLTHYSVGE
ETARRRLNTFIDQKLQSYENKRDFPYQDQTSHLSTFLRTGELSIRTIWQE
LASVPSSLSKETFKKELAWRDFYNMIYSAFPQQKEEAIQEKFRYIQWTND
PEMFVKWQKGETGYPIIDAAMRQLNQTGWMHNRLRMITASFLVKNLHIDW
RWGEKYFQKMLIDYDAANNIGGWQWAASTGTDAVPYFRIFNPIIQSKKFD
NDGQFIKKYVPELKQVPQKYIHQPNLMNEALQTQYHVHLGENYPKPIVDY
ASSKKQTLFLYEASKEIHQEMNNPRFQ
>EF0878 polA, DNA polymerase I
MTKKKLLLVDGNSVAFRAFFALHNSLERFKNKNGLHTNAIYAFNNMFENV
MQKEMPTHVLVAFDAGKTTFRTEFYSEYKAGRSKTPGEFKEQMPYIRELL
EGLGVKYYELPNYEADDIIGTLANKVDKDEFDVVVLSGDRDLTQLATDTV
KVDITVKGVSDIESYTPEHIAEKYDGLTPKQIIDMKGLAGDTSDNIPGVT
KIGEKTAIKLLKQYGSVEGVYENIDEMKKSKMKENLINDKEQAFLSKRLA
TIEVNAPVEVNVEDLAYEGKNLEKLVPFYKEMDFKQFLAKLDITEEPVEM
EDILFEVVEDQLTNEMFTDDMALYVEMMEDNYHTSPIVGLAWGNNKKIYT
TNNLAVFESQPFIDWLMDETRKKNVYDAKRTYVALNRYVGKMTGIAFDVL
LAAYLLDTNDNNADIEGVAQHYGYDAIQSDEAIYGKGAKKGLPEDEEVFF
GHLARKIKAIQFLTSKLDSELTEKNQADLFYKMELPLSRILGDMEITGIR
VDATRLKEMQVEFSERLKEIEEKIYAEAGEEFNLNSPKQLGVILFEKMGL
PVIKKTKTGYSTAVDVLEQLKEQAPIVADILTYRQIAKIQSTYVEGLLKV
IQPDNKIHTRYVQTLTQTGRLSSVDPNLQNIPIRLEEGRKIREAFVPRED
NWLIFSSDYSQIELRVLAHISNDEHLKEAFVEGQDIHASTAMRVFGVEKA
EDVTPNMRRQAKAVNFGIVYGISDYGLSQNLGITRKQAQQYIDTYFEKYP
GVKQYMEEIVRDAKDKGYVETLYHRRRYLSDINSRNFNLRSFAERTAINT
PIQGSAADILKIAMIEMARRLKEEKLQATMLLQVHDELVFEVPESELEQL
NQLVKEVMEHAVSLHVPLITDSSWGKTWYEAK
>EF3125 priA, primosomal protein n'
MQKVAKVIVDVPTMQTDQPFTYLVPENLNEQLAVGMRVEVPFGNGNRHVQ
GFVLAIEPVAATVLDETNVQLKELVAVLDLKPVLNTEMLALADYMKEKTF
AFKITCLQTMLPSVMRADYQKYIYLTDELSEELQDQLFYGLEEISWDQAQ
ERGLLPQLMALRKQQKVDIRYEVTTRNKVKMVRFIQAAKEFEQLEEIRLG
LRKGAKKKEQLLYYLQRLGTEKVTAVKEMKELGFSTALLNEAAKNGWLTF
IEKEAYRDPFANQTFEKTTALSLNAEQQVAVETILQSVQEQQSQTYLLEG
ITGSGKTEVYLQVIAEVLNQGKTAIMLVPEISLTPQMVQRFKSRFGEHVA
VMHSGLSQGEKYDEWRKIERGEAEVVVGARSAIFAPIENIGVIIVDEEHE
ASYKQEETPRYHARDLAIWRSEYHHCPVVLGSATPSLESRARAQKNVYQR
LRLTQRANQAATLPTIDVVDMRQEVENGNVSSFSMSLQEKLQERLEKNEQ
SVLLLNRRGYSSFVMCRDCGYVLPCPNCDISLTLHMDSKTMKCHYCGHEE
RIPYRCPNCGQDKIRYYGTGTQKVEEELQTLLPDSRILRMDVDTTRRKGA
HEKILRTFGEGQADILLGTQMIAKGLDFPNVTLVGVLNADTALNLPDFRS
SERTFQLLTQVSGRAGRAEKPGEVIIQSFNPEHYAIQLAKAQDYEDFYTK
EMYIRHRGDYPPYYFTVQITASHPEENEAAKQMFQIATKLKQGLSPQAIL
LGPTPNAIMRVNNRYFYQVIIKYKQEPMLQPLLKEILTDTQRATARGLKL
SIDAEPMNFI
>EF2926 radC, DNA repair protein RadC
MQVSDLFIREMPSDCLPRERLLAIGEKALSNQELLAILLRTGSKEADVMT
VAATLLKQFKQLSYLQQATLNELMAIKGIGQVKAIELRAAIELGCRIYQS
SQIKFGKVTSSQQVAQRLLQEMKGLQQEHLICIYLNTKNDIIQQKTIFKG
SLNQSIAHPREIFREAVKYSSARILLAHNHPSGNPTPSPQDIQFTKRMEE
CGEMMGIQLLDHIILGDSGYISLREENFFASE
>EF3171 recA, recA protein
MADDRKVALDAALKKIEKNFGKGSIMKLGEKADQKISTIPSGSLALDVAL
GVGGYPRGRIIEVYGPESSGKTTVSLHAIAEVQRNGGTAAFIDAEHALDP
QYAEKLGVNIDELLLSQPDTGEQGLEIADALVSSGAIDIVVIDSVAALVP
RAEIDGEMGASHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGV
MFGNPETTPGGRALKFYATVRLEVRRAEQLKQGTDIVGNRTKIKVVKNKV
APPFKVAEVDIMYGQGISQEGELLDMAVEKDLISKSGAWYGYKEERIGQG
RENAKQYMADHPEMMAEVSKLVRDAYGIGDGSTITEEAEGQEELPLDE
>EF0004 recF, DNA replication and repair protein RecF
MRLNELTLQHYRNYETVSLDFPKTLNLFLGENAQGKTNLLESIYVLAMTR
SHRTSNEKELIGWEQAAAKISGVVEKKTGTVPLEILISNKGRKTKVNHIE
QKRLSAYIGQLNVILFAPEDLSLVKGSPQVRRKFIDMELGQVSPIYLYDL
VQYQSVLKQRNQYLKQLAEKKQTDTVYLDILTEQLAEFGGKVLYARLGFL
KKLEHWANLLHQKISHGRETLTIDYASSIPIDNTDLSLEALQNQLLQQLM
NNRKRELFKANTFLGPHRDDLLFIVNGQNVQTYGSQGQQRTTALSIKLAE
IDLMHSETGEYPVLLLDDVMSELDNERQIHLLETIEGKVQTFLTTTSLDH
IKDKLTVEPDIFYVQQGKIERNSAT
>EF3113 recG, ATP-dependent DNA helicase RecG
MDITDLVSVLPGVGPKRAENLQELGIATIEDLLTYYPFRYDDIQEKDLSE
IQDQEKVTLKGLVVSEAVVSRYGYKKSRLTFRMMQEHAVINVSFFNQPFL
KDKVVLSEEIAVYGKWDAKRKSLNGMKILASKGDNEDFAPIYHVNKKVRQ
STLVQLIRTAFEEYGSLVEEILPNDLLEKYRLMPRKEAMWAMHFPSNPEE
SHQAKRRVVFEEFFLFQLKMQGLKKQEKAEKNGLAIQYDVDRLKTFTQGL
PFELTGAQKKVTNEICRDLRSPKHMQRLLQGDVGSGKTVVAAIALYATMT
AGFQGALMVPTEILAQQHMESLQQLFDPLEVRTALLTGSTKTKERRLILE
ELANGEIDIVVGTHALIQQDVSFHQLGLVITDEQHRFGVNQRKILREKGL
KPDVLFMTATPIPRTLAITAYGEMDVSIIDEMPAGRIPIETRWIRPPQLD
TVLEWMEKELARGHQAYIICPLIEESEALDVKNATEIFEHMQSFYSPRYQ
VGLLHGKMKNQEKDDIMQEFKDNQLQLLVSTTVIEVGVNVPNATVMLIMD
ADRFGLAQLHQLRGRVGRGSSASYCILVANPKNEMGVERMKIMTETTNGF
VLSERDLELRGPGEVFGARQSGVPQFAVGDIVTDFNILEVARQEASALWK
VKEWWQYPAYQGLANRVKPQDEAAQFFD
>EF1688 recJ, single-stranded-DNA-specific exonuclease RecJ
MKKSNYQWQLQTKTELPVEFIEQLKKEEINPLIGQLLWHRNIRTEEALRK
FLHPTIEDIYDPFLMHDMEKAVARIQQAVEAGEQILVYGDYDADGITSTT
VMKEAIELVGGMVQYFLPNRFVHGYGPNKDVFAEQIEQGVQLIVTVDNGV
AGHEAINYAMAQGVDVIVTDHHELPEQLPEAYAIVHPRHPQGDYPFGDLA
GVGVAFKVATALLGELPIELLDLVAIGTIADLVSLTDENRTFVKMGLQMI
QTGDRIGLDVLLQEAGVKKEAVSEESIGFTIGPRLNALGRLGEAAPGVEL
MTTFDEEQALEIAKYIDQQNNERKDIVTTIAKEALDLFDPNAPVHILAKQ
GWHEGVLGIVAGRIMQETGKPTIILAIDESGTTAKGSGRSISALNLYEAL
NEVREQFTHFGGHHMAAGMTLPVENIPFVQEHLAHFIEKNQIDMANGQEL
LISESLAVSQATTTFIDQLRILAPFGTDNTVPTFVFKEITPTQIRQIGAD
NAHLKFQMNQEGAQLDAIAFQMGPQADELAQGTADVAGQLSINEWNGRKK
PQLMVTDFAVLGRQLFDFRGKNNQTKPIPSEATAYLLFDEKNQKFISDPT
ANIIVWSNQEELVEAVSQNQIEQLVFVDCPVEAITVKEIVEATEIQRIYM
MFISPEEAYLNGMASREQFATLYKFILQQKEVNLRSQLSKVANYLNIQEK
LLIFMIQVFFDLGFVTIESGVLNSIEKPDNRPLTESQVYQQRLKKIKTEE
FLLYSDCQTIQQWLWNEEDK
>EF0984 recN, DNA repair protein RecN
MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRG
SSDYIRQGANKCTLEGLFSMPKSQELKKLLEELGIETEEDSLVIQRDISA
SGKNVCRVNGRIVNITNLKRIGEYLVDIHGQNEHQELMQSERHIDMLDEF
GGKKLLAVKEKYTQAYQEYRALEAKVRKRQKNEKEFAQRMDMLHFQSDEI
ASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGEDDSSLDKIGT
SMNELASIESLDSEYKTLSDTVQNAYYLLQEASGDLSRLIDGLELDEGRL
NEVENRLELIRQMKRKYGDSIETILSYYEEITKELAEADFLEGGTGDLEA
LLAEKQQAAHQQALALRKERKRLAKELEQQILTELKELYLERTEFEVRFT
ELEHLQENGLDGVEFYITTNPGEPLKPLVRVASGGELSRVMLAMKTIFSQ
TQGITSIVFDEVDTGVSGRVAQAIADKIYQISENSQVLCITHLPQVAAVA
DEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEITKLTIEHAQE
LLAMAKK
>EF1545 recQ-1, ATP-dependent DNA helicase RecQ
MLLTLEQELFTQFGYAAFKPGQKEVITNLLDGMNTLAVLPTGTGKSLCYQ
FVGQKLEGLTVIVSPLLSLMEDQMRQLQRQGIKGAVALNSTLQYSEKRYI
LAKMFQYDYLFLSPEMLLQQEVLSVLQRQKIALFVVDEAHCVYQWGVDFR
PEYSKLDLVQKQLDFPLTLALTATATPVVQHAIIKQLFSHGSYQEVLSSV
NRKNIGLFVKETSEKEEVLLDYLSKTAGKIIIYCATRNKTEQISQLIQAK
TSFKVAYYHGGLEASERSRLQEQFIDNQIDILCATNAFGMGIDKPDVRGV
IHFDLPDSLENYLQEIGRAGRDGQKSWALLLYKKGDEFIHRFFLEETRAN
RATLKSLIEGEEQAGLLENATELQQKWVQGYLAKDYSFEELEHRLEEKEK
DRQAQLRGMLTYIETTTCRRTLIQTYFQEPIVKQSPETCCDNCALFFDIY
QDSIVKSNKTSNQNEEGWRSKFLKLFKERD
>EF2459 recQ-2, ATP-dependent DNA helicase RecQ
MSALQELLKDTFGYDDFRPGQETIIRHVLRQENVLGIMPTGGGKSICYQL
PALLLDNLTLVISPLISLMKDQVDALNLMGIPATYINSTISYQEMNHRIQ
LAVNKEVKLLYVAPERLESYDFQQMLTHVPIDLLAVDEAHCISQWGHDFR
PSYLRLAEIIDQFQQQPTVIALTATATPQVAEDIVKQLRIPSENEIKTGF
ARENLSFQVVKDQNRDVFLLEYLKMNTGQSGIIYASTRKEVERIYHLLES
KKIAAGMYHGGMSEQLRSENQEAFLYDQVQVMVATNAFGMGINKSNVRFV
IHAQVPGNIESYYQEAGRAGRDGLPSDAVLMFAPQDLQIQQYFIEQSEMT
IDYKQKEYLKLREMSQYANAQMCLQKYILRYFGEEGTDCGRCSNCLDNRE
LVDITVDAQKVLSCVKRMGERFGKGLVGKVLTGSKDQKIDQWHFDRLPTY
GLMKGRTQKEVTQLIDYLTAERYLIPSDGQFPLLSVSTEGVQVLLGERKV
FRKEDQKVRKVAVDDALFERLRELRMDMAQEAGVPPYVVFSDSTLKEMCE
KLPQTTIQLLQIKGVGQNKLDKYGTAFLEVIKEYQETKK
>EF2766 recR, recombination protein RecR
MNYPEPIAKLIESYMKLPGIGQKTATRLAFYTIDMKEEDANAFAKALISV
KRDLHFCSICGNITEEDPCEICQDKNRDRSIILVVEEPKDVMSMEKMREY
QGLYHVLHGVLSPMEGTGPEDINIASLIKRLHDDEVKEVIIATNATTEGE
ATAMYLSRLIKPAGITVTRLAHGLSVGSDIEYADEITLLKAVEGRREI
>EF1113 rexA, exonuclease RexA
MSKTIPLRPANEQFTDSQWQAVFDGDENILVSASAGSGKTTVLVRRVIEK
VKSGVDIDRLLIVTYTEAAAREMKERIQVALQKAMNEEQDPERRRHFSRQ
IALLPTANISTLHAFCLTVIRRFYYLIDIDPVFRMLTDETETLLLKEDVW
DALREQFYAENQEAFYQLTANFSNDRSDDGLTNLIFSFYEFAKANPDPEA
WINGLTQAYEVGDQLGESKLFQTYLKPLAVETLQRTLQRYEEMVTLTEGE
EKLQKIWYLAQNEKEQTKQFLQFLERNDLESAYNLTELLSFDRYPTVRAE
ELKPTAEQAKQLREQNKKALNDLKKQLFTLSPDAMKQVLKEATPIVQEMA
HVGKQFMEAYGAEKRLKNLVDFNDLEHYTLAILAKNQADGWHASEASVYY
REKFDEVLVDEYQDINQLQESILYWLRRPLSTEGNLFMVGDVKQSIYSFR
LADPTLFIEKYNQYGQGKEGKRIILAENFRSRKDVLDFTNLVFSQLMDER
VGQIAYDESAALVHGFDQFSEAADYSTELLIYEKKATESVEFPELQSPEL
LIEDKTEGELYVTALKIRELIDQNFLIYDKKLKTDRPITYQDIVLLTPTK
KNNLTILDVFKSLEIPVQVNDAQNYFQATEIRTMIALLQLIDNPYQDIPL
AAVLRSPIVGLKENELVLIRLANKETSYYEAFLTFNQKMEPTMEEAVVQE
KTIRFAESLEKWREQARRNQISNLLWTIYRETAYLDYVGGLPVGKQRQAN
LYALVDRAAAYEKTTFRGLFQFVRFIEKMQEKDKDLAEPVVLSEENAVRV
MTIHASKGLEFPVVFVLDMTKEFNVSDLNERYIFEENLGVGIRYLQPEER
VMYDTLPFLAIKQVRLRKLLSEEMRKLYVALTRAEQKLFLVGSYKDQAAM
WKEWLKVGDVETLVLPAENRLQSKSSLMNWVGMTLVRHQKADEYQQEVVV
SNVPQVKKHPANFHIQWFNEEQLRAAIQQLQLPERQAEDLAEKAQLSADK
INRGLARLSFNYPFEVATRTTSYQSVSEIKRVFDDPDNKEIGKIEVREDN
TIQAQPLIVNRMIEGDLSKPKFLDTVQAPSAAEIGTATHYLLQLIDLSKQ
PSYEEVRAVQERLVENKLILPAIAEKMNLEQIVAFFDTALGKQLIQHHQT
VRREQPFSMLIEAEELIQNYPETTQDDLLIHGIIDGYIELDNQCILYDYK
TDHVKGTSPQAISEIVERYRGQMNLYRRALQEATHKEVSHVYLILLNGGV
IIDMQTGNVVDFIK
>EF1112 rexB, exonuclease RexB
MSVQFIRGTAVADLEAPLIQATKQWLEEDAQHEVFYLVPNHIKFEQEIQV
LQKLRQLQTTTSDSITSTRLQVFSFYRLAWYYLQHTPFYSADVLSDAGAA
MIFRKILVEAEEELQIFRGEINKPGFIQQLFQLYQEMREGNIEIAELYPF
LEKQTENPKGQDLQLKFQDLTLIFTRFQLQMSQYGYESAEIIQHLSEYLQ
TVDLSNVQFVISGYQQFTARELKLIEVLMAQAGSVKVALLLDKQYPHDLP
DPRSLFYEAGQTYHQLYQLARQKQIPILSDYVEKKEVLITNPDLQGLNDY
WIQSQEHLPPLSTADWRGDGLFLWRAENVKEELTHVATEIRRLVVEEGYR
YKEIQVLTRDLDCYENLLEPIFAEHEIPVYVDRDMAMDRHPLVEWIESLF
AIHSYNYRYRDVLRFLRTELFMPMNQLATSEESLTDWLNQRNAWRRKVDI
TENVVLAYGYEGYYWSQEKDWEFIRYDFEAEEQEDVATMEEESNAIRQSL
QRLLPSYFQAMISAKTGLEAATVFYHFLLQSGVATQLKMWRLQAIEAGQL
ETARNHEQTWDALMSLLDEYVTVYGESSFDFTTFQEIFVSGLEGLHYSKV
PTAIDQVQVRAMDLTRPGAAKVTFAIGMTEEIFPQKIENKTLLSDEERQT
INDTLTENQYLRGTTGRKIAQEPYVAYLVFSSARERLYLTYPSVKDTAQE
VKPSPYFKNIQKDLNLPVFEKNETTIFDDETTSLAHISTYRTLIGELTRL
KRQRKETQEGLLPFWLNMEKALMNQSIAPLAKQVFESLTHQNIPEKIDEV
LAEPLYGKDIYTSVSRMESFYRCQYQYFSRYGLRLKERDVFGLSPAATGE
FFHEALDQFFKLLIMNQRNLSELTDQEVNLLAEEVLNSILGDARFSVLTT
SSRMNYIRYQLSQTIKKVSWALKRQSQRSGMTTVQTEVLFGQIAAKKGIS
GLELPLKNQGKIHVRGKIDRIDQLVTPESTYLGVIDYKSSHRKFNMTEAY
YGLAMQMLTYLDVALMDAVQLVGQEAKPAGSLYLHVHNPTLSYEGKDDIE
QQMLKKYQFDGLLMKDPDLLDHLDTSLQAKQSSLLFPIEESAKEQIKPGR
RQEDKFVTEPELGALLSHNRNKFIEAGNQIIGGEVQLNPAYQGKERIACR
YCPFRSVCDFDVMLKENNYHRIENLSKEEIMARLLNKDEEGATEDE
>EF1653 rnhB, ribonuclease HII
MAKESIQAIKEALLTVTDATDERLASWREDERSGVQQAIKQWERRQLAKE
KEWQLFKEMSQFEEAAYKKGHRLIAGIDEVGRGPLAGPVVTAAVILPKDC
QLLGLNDSKKLSAKKRETLYNQIQEQAVAIGLGIADQGVIDQINIYQATK
QAMKMAIDDLAFTPDYLLIDAMQLDVPQPQESLIKGDARSISIAAASIIA
KVTRDRLMEEYDELYPGYGFKNNAGYGTKEHLLGLEKYGVTPIHRRTFAP
IKDMI
>EF1267 rnhC, ribonuclease HIII
MAQNHVIKVSKKTLAEMTTVYQPNRLNKTVPYTVFVAKVGTTTITAYQSG
KVMFQGPQAEKEAARWEGTSTTPKKKVSPQTTTLPADFGNWSVIGSDEVG
NGSYFGPVTVCAAYVDKSMISKLKSLGVRDSKELTDPQIIQLSHVIKELI
PYKLLIVEPKKYNEIQPNYNAVHMKVALHNQAIYLLLQELAPTKPEGILI
DQFTPENNYRKYVRNEKNQVTEKLFFVTKGEQYHVAVAAASIISRAAFLE
ELDKESAELGFSVPSGAGSKSDQVAARILKKGGLDLLANYAKLHFANTQK
AQKLL
>EF0066 ruvA, Holliday junction DNA helicase RuvA
MYEYIIGKVTFVSPYYIVVETNGIGYQISVDNPYRYSGKMDTDIKLYLHQ
VVREDAQLLFGFGSLEEKQLFLKLISVSGIGPKSGLAIMASVADHGGLIN
AIEGEDVTYLTKFPGVGKKTAQQMILDLKGKLGELESSEAAVAAMTATEA
VTTSNQALAEALEALSALGYSDREIKRITKQLEALGETTTDVYLSNALKF
MMKR
>EF0067 ruvB, Holliday junction DNA helicase RuvB
MTEEERLLSAASQEAEASIEKSLRPQFLAQYIGQDKVKQELTIYIEAAKN
RNEALDHTLLYGPPGLGKTTMAMVIANEMNVNIRTTSGPAIERAGDLVAI
LNELEPGDVLFIDEIHRLPRVVEEMLYSAMEDFYIDIMVGQGTTAHPVHF
PLPPFTLVGATTRAGMLSAPLRDRFGIISHMEYYQEQDLKEIVLRSADIF
QTEIFEEGAFEIARRSRGTPRIANRLLKRVRDFAQVQSDGKIDRAIADKA
LTLLQVDHQGLDYVDQKLLKTMIDLYGGGPVGLSTLSVNIGEETETVEDM
YEPYLIQKGFIKRTPRGRIATPFAYAHFGYDYLEGRKN
>EF2689 sbcC, exonuclease SbcC
MKPLSLTLKNFGPYINETIDFTKFEDSSLFLISGKTGSGKTTIFDGMSYA
LFGESSGKLRLGKEMRSTFADPSEATEITLLFKHNEYLYELNRLPEQELF
KKRGTGVRKQSAKISLIVKDAQGKELRAYSKRREVDELIQELLHLNANQF
AQIVLLPQGEFRTFLIAKSDEKEKVLRNLFGTELYQLFSENLKERLKIAN
QEIQETQQKIELKTEQLHWSEEPEPTMTLFEKLQLLESQQQEAQQQLLVE
REQIATLKQAKQAKEQVRYAIEERQNLQQQKEELLEKKAKQAEQETVIER
LKEQIQQLKWSQKQQSLAEKVFEKRSEKQQKEQETKSKQQALMETQQALT
DWQAIMSELEEQQPLIAEKQERLQTIQRQLPQYQEYEQLAQQQIAEQANY
QAIQKEYESCQQEKITLADKVATAKQFIEQEGTLEKANFECSSVADHWQN
FVERWQKNQKAWQKISQNQGELHELTQRFAVEQQQKSAEEAKLQTKKSQW
ASLQIQRLSLLLEEGEPCPVCGSLEHPKQQTHQEVSLEEIDQAERELTEV
EKTVQRFTETLSALGAEKQQKESQLQEQEAAYTEEQEQLAAQFADLQLPL
TGLTFSQVTPAEIAEVESQLAKEKQQIAQKLTEISVEKDHLAELEEQVAE
NSQRFEVLRQQVETMQQSLERITIQQQMIASQLLDATVTYEEMTKQQTLL
QEELSAFERQKENVTTQGETLKKEEMILESTLTHLEKEQQTLQQTVAQLE
SQLNAVLTEQGVTEDQLTEWLKEVPTLESQQEQIALFEQEQTQLTIQLAE
IEKKLSSDTFPELSLITTEIEQITQQIEEQEKKYYQLHEKMQNNQQLVQE
INAQRTTIEDKFEEVAALQQLADTVNGNNPKKISFERYMLQTYLERVLTV
ANQRLDRLTNSRYQFELNHEAGSYRNQTGLEINIYDDNSGTVRSAHTLSG
GESFIAALALALSLAEVIQEQAGGVLIDALFIDEGFGSLDEEALEMAMEA
LETIENEGRMIGIISHIGELKARIPQQLQIKSNGNGQSTVHYQLA
>EF2690 sbcD, exonuclease SbcD
MKFLHTADWHIGKKLHGFDLLAEQREAFEQILAIAKEEQVDAVVIAGDLY
DRSVPAVEAVEIFNEMMIQMNLKEHFPVLAISGNHDSSTRLETGGPWFNQ
TQFHLNTRLEQAFQPIEIDNTQFYLLPYFEPIAARLYFEDETIRTIQAAM
EKVVAKMQESFLPNKKQVLVSHFFVAGSEKTDSETKLTVGGLDVVPTALL
EPFDYVALGHLHGKNALQAPNARYSGSPVKFSLSEMTQEKGVWLVETEAE
VHFQFRALKPLRDIQQLTGSFQQLTDPAFYQEVNRENYLHVQLTDRAIIP
NMMNQLRKIYPKIIGLERLNGRETSSGNQKKVVQIEQRSPEEHLHDFFND
VTGEALTEQQAQWVQEELSTLNQLERGK
>EF0008 ssb-1, single-strand binding protein
MINNVVLVGRLTKDPDLRYTASGSAVATFTLAVNRNFTNQNGDREADFIN
CVIWRKPAETMANYARKGTLLGVVGRIQTRNYENQQGQRVYVTEVVCENF
QLLESRSASEQRGTGGGSFNNNENGYQSQNRSFGNNNASSGFNNNNNSFN
PSSSQSQNNNGMPDFDKDSDPFGGSGSSIDISDDDLPF
>EF0499 ssb-2, single-strand binding protein
MINNVTLVGRLTKDPDLRYTQSGTAVGQFTLAINRNFTNANNEREADFIN
CVIWRKAAESLANYATKGTLIGLTGRIQTRNYENQQGQRIYVTEVVTESF
QLLESREVNEQRKEQATGKATFDKQSMDKPDPLDPFSPENSIVDISDNDL
PF
>EF0510 ssb-3, single-strand binding protein
MIKTSAVGRLTKSSELRVTSTGKAVANFALACKRERLDKEGNAQTTFIQC
VIWGKPAEVLAKYTQKGSLIAVNGELQSRSYDDQQGQTHYVTELVVAGFE
FLESKETVQNREQKQQMPEMANAEPFYGMDDMEPPAYH
>EF_A0019 ssb-4, single-strand binding protein
MIQLSAVGRLTKGAELRTTTNGKSVANVTLACKRKRPDTNGNVPTTFIQC
VLWGKPAQVFAKYTQKGALVGVNGELQTRSYDDQQGVTHYVTELVVEDFE
FLESKETVQKREEKQHAVPQGQSTPTVNEQPAMNQAPTQQNVYQQPSMNG
LSEYGYNQ
>EF_A0034 ssb-5, single-strand binding protein
MINNVTLVGRLTKDPDLRYTQSGTAVGQFTLAINRNFTNANNEREADFIN
CVIWRKAAESLANYATKGTLIGLTGRIQTRNYENQQGQRIYVTEVVTESF
QLLESREVNEQRKEQATGKATFDKQSMDKPDPLDPFSPENSIVDISDNDL
PF
>EF_B0043 ssb-6, single-strand binding protein
MINNVTLVGRLTKDCDLRYTSSGVAVAAFTLAVNRNFTNQNGEREADYIQ
CVIWRKPAETLANYTRKGTLIGLVGRLQTRNYENQQGQRIYVTEVVVESF
QLLESKEVSQQRGVNASNPTPVGQQESNTQQPFPDLEGSSIEISDHDLPF
>EF0278 tag-1, DNA-3-methyladenine glycosylase I
MNNYQWYTEQWGKPTREDDLLFLLLTVGVFQVGLSWKAAAGKKVAFMKNF
CQMKPEKVAALLPDEVDRIVADPDMIRNRRKIEATIKNAQAILKVQEEFG
SFANYLWQFVKNVPVLSIYEEAYQVPRTQLLSDNVAKDLKKRGFSFVGPI
VTNMFLKASGIIQVEILNPE
>EF3050 tag-2, DNA-3-methyladenine glycosylase I
MERCTWATNTTEEMQAYHDDEWGRPVHEEQQLFELLTLESMQAGLSWAII
LNKRETLRAAYDAFDYRKIARYDEEKILALLANPGVIRHRLKIQATITNA
QVFQEVQAEFGSFDRYLWNFVDQQPIVNHWQHPEEVPASTELSQQISRAL
KKRGFKFLGATTVYSFLQAAGLVNDHLETCQYK
>EF1650 topA, DNA topoisomerase I
MAYKYLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDLPKSKMGIDIENN
YEPHYISIRGKGDVIKSLKAAAKKAEKVYLAADPDREGEAIAWHLAYLLG
LDLKDKNRVVFNEITKEAVKAAFKEPRTINVDLVDAQQARRILDRLVGYS
ISPILWRKVKKGLSAGRVQSVALKMIIDRENEIREFKPEEYWSIDGNFQK
GRKKFKANFWGVDGKKKKLPNAEAVKEITSRIDGKDYDVTKVEKKERKRN
PALPFTTSSLQQEAARKLNFRTRKTMMVAQQLYEGIALGKQGTVGLITYM
RTDSTRIADSAKAEAAEFIEKTYGDEFSAHGGRKAKNTQGAQDAHEAVRP
SSVLRTPDEMKKYLDKDQLKLYTLIWSRFVASQMTPAILDTMKVTLQQNG
VTFIANGSKVKFKGFMQVYVEGRDDGKEDKENILPELVEGDVVKSVDIEP
KQHFTQPPARFSEATLIRTLEENGVGRPSTYAPTLETIQRRYYVKLTNKR
FEPTELGEIVNSLVSEFFPQIVDTHFTATMETDLDKVGEGQEKWVEVVDR
FYKPFEKELTNAEEKIEKIQIKDEPAGFDCELCGHPMVIKLGRYGKFYAC
SNFPDCRNTKAIVKEIGVTCPVCHEGQVIERKSKKNRIFYGCSRYPECDF
TSWDKPVGRPCPKCGQYLVEKKVKGGKQVVCINGDYEENVQK
>EF2064 topB-1, DNA topoisomerase III
MVAKQLIIAEKPSVAKDLSRVLGANQKNKNYYEGPNVIVTWALGHLLGLK
MPEDLNKEWQTWQMETLPMIPKNLGIKPLPKTGHQLKAIKQLANRKDVSE
AVIATDAGREGELVARWILEYVRFNKPVKRLWISSQTDKAIKDGFKKIRP
AKDYDNLYYSALARAKADWLVGLNVTRALTVKYQDNLSAGRVQTPTLAMV
RQQEKTIEQFKPQTYFTISLSVESEKAKMTQKNPYALKERQEAEQLVKEL
SKQKGLVTDIQEKVKTENAPLPYDLTEIQREANQRFQFSAKKTLSLVQSL
YETHKIVSYPRTDSKYLTTDMKGTMKERLQAIADFSPEVKGYLKNGAVVK
QQKVFQNAKVTDHHGLIPTEQRPRYEKLSNDEQKIYQMIVQRFLGLFAEP
NQTKQTKVTVAFGKETFVFHQNKVVVAGWKTTAEQPLSTVQWQKGMTVAP
NFTINKELTSPPKPLTEGTLLGKMEKHSLGTPATRAEIIEKLIKSELMER
TNSGLSVSAKGKQLLDLVNPSLVTPELTEKWEKSLEAIASGQQKSQLFLK
DIEEDTKKLVREIKQSEKKYQDFSITQKKCPDCGSNLREKNTKDGKIYVC
TNQECSYRRRKDPKVSNHRCPQCHKKMVIIEGKNGRSFKCKFCSITEKIP
DKKERKQKMTKHEERRLMKKYSQPDEPEESALAQALKAAMNQE
>EF2312 topB-2, DNA topoisomerase III
MQLVIAEKPSVGMALSKVLGAKSRGDGYMEGGGWLVSWCIGHLVELAPAD
AYDPRYSKWNYADLPILPKPWQFQVLPDTKKQFEVLKTLIHRADVTALIC
ATDAGREGELIFRLTYHLCGCTKPVKRLWISSMEEAAIQKGFDNLLDGKN
YDNLYAAALCRAKADWLIGINGTRLFTTLYQGKSLNVGRVQTPTLALLAE
REAAISGFQKEKFYTVELELEGFRAASERFASKTDAGRLRTGCVGKPATV
QTVSQKEKTERPPKLYDLTTLQREANRLFDYTAQQTLDYLQALYEKRLAT
YPRTDSRYLTEDMAAGLPALCQSVAAALPFAADLSLPVNAAQVIDNSKVT
DHHAILPTTEAAKTDLSALPSGEKNILFLVAARLLCAVGEPHTYAETAVT
LECGGAVFSAKGKTETAAGWTAMEQAFHATLKKKPKQPEPSPPLPALTKG
QKLTAGGASIKEGATSPPAHFTEDTLLSAMEHASAKEFAKLEDVEHKGLG
TPATRAGVIEKLVRSGFVERKKKQLFPTEKGTELIKVMPDTLKSVKLTAE
WEERLGAVERGELSPEDFMAGITAMLTELVKSYQGVTVASAALSASGRTV
IGICPRCGKNVVEGKKSFFCEGWNAAPACDFALWKNDRFFTSKHKELTRK
AAAALLKKGRVAMTGLFSEKKGVLYDAIVVMEDTGEKFVRFKLEFDNNTP
KKKGN
>EF0948 ung, uracil-DNA glycosylase
MKEIIHNSWQNILSAEFEKPYYQELREFLKKEYQTQTIYPDMYHLFSALE
LTPFEEVKVVILGQDPYHGPNQAHGLSFSVQPGVKVPPSLANIYKELQAD
LGYQPVNHGFLESWAKQGVLLLNTVLTVRAGQAYSHRGKGWEQLTDVIIE
KLNEREKPVVFILWGRPAQEKIKMIDTTRHVIIKSPHPSPLSAHRGFFGS
RPFSQANAALERLGETPIDWQLPETV
>EF0763 uvrA, excinuclease ABC, subunit A
MANDKIVIHGARAHNLKNIDVTIPRDKMVVVTGLSGSGKSSLAFDTLYAE
GQRRYVESLSAYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTV
GTVTEINDYLRLLFARVGHPICPNDHIEITSQSVEQMVDKVLELPERTKI
QILAPVVVKKKGQHKKVFEMIQREGYVRMRVDGETYDVSEAPELEKNKKH
DIAIVIDRIVVKEGIRSRLFDSFEAALRLAEGYAIVDVIGQEEMLFSEHY
ACPYCGFTVGELEPRLFSFNAPFGACPDCDGLGVKLEVDKDLVIPDPTKT
LREGAIVPWNPISSQYYPQMLEQAATSFGIDMDTPFEELPADQQEIILNG
SGEKNFHFHYENDFGGVRDVEVPFEGILKNIKRRYHETNSDFTRDQMRLY
MTELTCRSCQGYRLNPQALAVKINGTHIGEVSELAIKNAVQFFEGVSLSE
QETTIARPILKEVEDRLTFLKNVGLDYLTLSRAAGTLSGGEAQRIRLATQ
IGSNLSGVLYILDEPSIGLHQRDNDRLIDSLKKMRDLGNTLIVVEHDEDT
MMASDYLIDVGPGAGHLGGEIVAAGTPEEVAKNPHSLTGQYLSGKKVIPV
PKERRKGNGKAIKVTGASENNLKNVSVEFPLGEFVAVTGVSGSGKSTLVN
QILKKALAQKLNRNSNKPGKHKSITGYEAIEKIVDIDQSPIGRTPRSNPA
TYTSVFDDIRDLFAQTNEAKVRGYKKGRFSFNVKGGRCEACRGDGIIKIE
MHFLPDVYVPCEVCHGKRYNSETLEVHYKGKNISDILDMTVEDAVEFFKH
IPKIHRKLQTIVDVGLGYVTLGQPATTLSGGEAQRMKLASELHKNSNGKN
FYILDEPTTGLHTDDIARLLLVLERLVEAGNTVLVIEHNLDVIKSADHVI
DLGPEGGDGGGTIVATGTPEEVAKVKDSYTGYYLKRVLK
>EF0762 uvrB, excinuclease ABC, subunit B
MIERETSNTFHLASKYEPAGDQPAAIAELVDGVKGGEKAQILLGATGTGK
TFTISNVIQEVNKPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDY
YQPEAYVPSSDTYIEKDSSINDEIDKLRHSATSSLLERNDVIVVASVSCI
FGLGDPREYSQQVVSLRVGMEMDRNELLKSLVDIQFERNDIDFQRGRFRV
RGDVVEIFPASRDEHALRVEFFGDEIDRIREVDALTGEIVGETEHVAIFP
ATHFVTNEEHMEHAISQIQEELEARLKVLRSENKLLEAQRLEQRTNYDIE
MMREMGYTSGIENYSRHMDGRQEGEPPYTLLDFFPDDFLLVIDESHVTMP
QIRGMYNGDRARKQMLVDYGFRLPSALDNRPLRLEEFEQHVNQIVYVSAT
PGPYEMEQTETVVQQIIRPTGLLDPEVEIRPIMGQIDDLVGEIHERIEKD
QRVFVTTLTKKMAEDLTDYFKELGLKVKYLHSDIKTLERTEIIRDLRLGE
FDILIGINLLREGIDVPEVSLIAILDADKEGFLRSERSLVQTMGRAARNA
EGKVIMYADKITDSMQRAMDETARRRAIQEAYNEEHGIEPKTIIKEIRDL
ISISKTADKDETVVQLDKSYKDLSRQEKADLLMKLEREMKDAAKALDFET
AATLRDTILELKAAK
>EF1406 uvrC, excinuclease ABC, subunit C
MNERIKNKLALLPDQPGCYLMKDKNGTIIYVGKAKILKNRVRSYFRGSHD
TKTERLVSEIDDFEYIVTESNIEALLLEINLIHKNNPKYNIMLKDDKTYP
FIKITNEKYPRLMITRKVLKDKALYFGPYPDVNAANETKKLLDRLFPLRK
CNPSQKTPCLYYHLGQCLCPYAFDVDPQVYKDMVEEIKGFLSGGHTEIQD
RLQEKMAYAAAHMEFEKAAEFRDQIKAIETVMTRQKMTNVDLIDRDVFGY
AVDKGWMCVQVFFVRQGKLIERDVSIFPFYDDASEAFLTFIGQFYQENEH
FVPKEVLIPDDIDKESVEALLATKVLQPQRGEKKKLVKLASKNAAVALNE
KFDLIVRKQERTIGAVEKLGNAMNIPAPIRIEAFDNSNIMGTNPVSAMVV
FIDGRPAKNEYRKYKIKTVQGPDDYASMREVIYRRYSRVLKEGLPFPDLI
LIDGGKGQVDVAKDVLANQLGVDIPVAGLAKNDKHKTSELLFGPNLEVVP
LERNSQEFFLLQRIQDEVHRFAITFHRQLRSKNSFASKLDNIEGLGPKRK
KNLLKEFKSLKNITAASVEELRKAGLPETVAKNVYRHLHQETTSEIEK
>EF0979 xseA, exodeoxyribonuclease VII, large subunit
MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANAHQYFSLK
DDHAKISAIMFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHM
EPDGVGALYQALAELREKLGKEGLFEGPKQQLPRYPKRIAVVTSPSGAVI
RDIITTVKRRYPIAQLVLFPTLVQGEQAADDIVRNIQRADAQSDFDTMII
GRGGGSIEDLWPFNEEKVARAIHAATTPIISSVGHETDVTIADMVADVRA
ATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTERFQRLQNSY
VFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTP
KGQLRESQQQLAFLQRNLQTQMTQLFLNKQKQFTSAVQQLDLLSPLKIMG
RGYSYTTKEDRVVKTVTELQPADQLTIHYADGTVQANVETITAKKEEF
>EF0980 xseB, exodeoxyribonuclease VII, small subunit
MPAKEKTFEESLNALEEIVQRLERGDVPLEEALAAFQEGMALSKQCQDTL
EKAEKTLTKMMTENNEEIVFEESEEA