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Gene list

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COG category: Replication, recombination and repair
Organism: Pseudomonas putida, NCIB 9816-4
Gene type: CDS

Number of genes found: 10

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# Pseudomonas putida, NCIB 9816-4

>gid:1156384    putative ligase fragment
MQLLANACRMQLEGIVEKRDGRRYSSARNGAWVKLKCDNRQEFVISGFTR
AATGVGSLLLRAPLYELITALLAQTAWNNWSKSAIKVPLSMNALSKGLLG
LGAMPLTLLGSFAVFPVFNAPSQGNWIVAGTVAAAGALGAWFIEWTERKV
VAIASSST
>gid:1156409    putative transposase
MYMTNRNDKGGELLGQERRRRWSPEQKLAMVRESLQPGQSVSVVARQNGV
NANQLFQWRKLYQSGSLSAVSAGESVVPASELADALKQIRELQRMLGKKT
MQVEILQEAVEIARSRKWIAHSPLLPGDDQ
>gid:1156408    putative transposase
MDCALTLVAGGRPVKLISESLGVARSQLTVRLNPNAQVERRRPALDDAAL
VEEIQAEVSELPSYGYRRVWGLLRRRREKQSQAPINVKRVYRVMRDHQLL
LERRIKQPGVARRHEGRIAVATSDTRWCSDGFEFRCDDNAKLSVTFALDC
CDREAIGWVASPTGYSGDDIRDLMLEAVEKRFGEEAPATPVQWLSDNGSA
YIAEQTRQFARQIGLQPLTTPVRSPQSNGMAESSS
>gid:1156382  intA  putative integrase
MSKLTPKFVKDVDQPGSYQDGRGLILRVSATLRKSWVFRYMLAKQRHDLA
LGTFPALSLRDARLEADKYRLDIARGVDPVAERVKAKAAKASRATTSHTF
RASAERYIRTHSSSWSKRHHQQWQNSLTKHVYPVIGGFRIAEVDTDDILD
VLTPIWSKIPVTANRVRNRIELVLDAAKALKLRQGENPARWRGHLDKLLP
KQSHTVVPFPSPTPSRTAELLARLDSLDGAAARAVEFAILTATRNQEVSG
AQWPEIDWEEKVWYIPAERMKAGKAHRVPLTEQMLEVLRQQIGKHDKWIF
LNSWRTGPIPGNAMARVLDQLQVDGVVPHGFRSTFRTWAAEETDHQREVC
EMALAHTLNSKVEAAYNRGDLLDKRRALMKDWGDFLVVNAPQVNGEVSDL
VSELAPDAGSDLAKVQPAA
>gid:1156373  res1  putative resolvase
MFVRAYLRASTEDQDASRARDQLEEFVASHGKVIAASYMENISGTLADRP
ELQRLLNDARRGDIILVEAIDRLSRMNDQDWRALITAIDSRGLRIVAVDL
PTSYQGLTLPSGDEFTDRMLASINSMMTDMMAAIARKDYLQRRHRQSQGI
TKAKAAGVYKGRPADLALRKRVSELLAAGLGIRAIARHAVCSTTTVMRIR
DELVESLSS
>gid:1156380  ruvB1  putative ultraviolet light resistance protein B
MSVDLSNDPMLNQADQVRSPDFMDGFKQNFADCTSTEVFENVTKNAHVAN
YKTCERVVDQGGNVEFLHDYKVGVIEYVSGQPNFQSCGPGCLYIWVGMVG
DNYWSGNCKIYEEYTRFRVIAKDAIISATVDRAVFDESFVRLEDQREPLV
DVGRAIQARVLQWVALPVGVGIGHTKTLAKAAQHASKIWREKTGGVVDLR
KPEAVEWLLRRMPVEEVWGIGRRMRDNLAGEGIKTAWELSHAEPRTMGRK
YSVVLERTIRELRGESCIDMEQSPPDTQTICSSKMFGQRVHTIEGLGQAL
ATYIHKAAEKLRKQRSLCGGLRIGIQTSFHGDGPKYANAATVIPDYPTDD
VRVLTKHALRALEGIYRPGFAYSKAEVMLMDLRKRGEYTQDLFTPSQPAR
TDALMSVMDKINRRWGHDCLRTAAVPLSPDWGMRRALLSPSYMTSWDQMW
TVQC
>gid:1156426  ruvB2  putative ultraviolet light resistance protein B
MNFEPRRPVFSLVDANKFYCSCERIFRPELRGKPVVVLSNSDGCIVACTN
EAKELGLKMGDPYFKIRAFLERNGVAAFSSNYTLYGELSHRMAMATASLV
SAVEQYSIDDALGYVLSLNLYRRQLTVAQRALIAAELSSLRGSSTITVDL
EKAAGQELCLCCGCSKEAGESGEGKNAGP
>gid:1156431  ssb  putative truncated single strand binding protein
MARGVNKVILIGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVE
KTERHRVSLFGKVAEIAGEYLRKGSQVYIEGKLQTREWEKDGIKRYTTEI
VVDMQGTMQLLGGRPQNQDGTNQAQQQRRPQQPAPQPQPAYDPMDDDIPF
MDPYRFSCLLQ
>gid:1156420  tnpA  transposase
MKQMTFADAEYAGKRKQTRKELFLIEMDRVVPWKGLIALIEPHYPKGEGG
RPAYPLMAMLRVHLMQNWFGYSDPAMEEALYETTILRQFAGLSLERIPDE
TTILNFRRLLEKHELAAGILAVINGYLGDRGLSLRQGTIVDATLINAPSS
TKNKDGKRDPEMHQTKKGNQYYFGMKAHIGVDDESGLVHSVVGTAANVAD
VTQVDKLLHGDENMVGADAGYTGVEKRPEHEGREVIWQIAARRSTYKKLD
KRSALYKAARKIEKAKAQVRAKVEHPFRVIKRQFGYVKVRFRGLAKNTAQ
LVTLFALSNLWMARRHLLANAGEVRL
>gid:1156442  traC  putative TraC protein
MFNVTSIKGSNQYAAAGYYTAADDYYAKESPGEWQGIGAELLGLDGPIDQ
KELAKLFDGKLPNGELMPKPVNKETGQIVNRRMGLDLTFSAPKSVSMQAL
IAGDKDVVAAHDRAVTKAMEHVEKLAQTRRKEHGKSMLERTGNLIIGKFR
HELSRAKDPQLHTHAVVMNATRRADGKWRAIHNDDIFKIQPQIDAMYKGE
LAKELRELGYEIRVLDKDGNFELAHISRDQIEAFSSRSKVIEEALAKDGK
TRSNATALEKQIIAMATRPRKDERDRHLVKEYWVIKARDLGIEFGGRSQL
DNREYGRRSESIHAEHNLPEGITAGQAVVQYAINHLTEREQVVGESDLRT
AALRRAVGLASPSEVDDEIKRLVKQGTLIESPPTYTMATGKDGTALSPAG
WRALLKEQKGWTDKEAQQYVKMAITRGSLVEAEKRYTTQRALKREKAILA
IERSGRGLVAPLLSKEQVAKALEGSTLSAGQYQAVEVIVSTSNRFVGIQG
DAGTGKTYSVDRAVKLIESVNNAMTERTTTTDAVFRVVALAPYGNQVTAL
KNEGLDAHTLASFFHTKDKKLDERTIVVLDEAGVVGARQMEHLMRIIEQS
GARLVQLGDTKQTEAIEAGKPFAQLQQNGMQTARIKEIQRQKNQELKIAV
QHAADGNPGKSLEHVNHVEEFREPGQRHQAIVRDYMSLTPEERKEVLIVA
GTNKDRKQINAMTRESLGLVGNGKELPTLNRVDTTQAERRYAPSYKKGMI
VQPEKDYIRTGLSRGELYTVDQALPGNVLVVKDKNGNRVEFNPRKLTKLS
VYNLEKPEFSVGDLVRITRNDQKLDLTNGDRMRVVGNANGVIELASLKEK
DGTPERVVALPTNRPLHLEHAYSATVHSAQGLTNDRVMISINTKSRTTSQ
NLWYVAISRARHEARIYTDSIAGLPAAIANRYDKTTALSLQQARERQRNE
SIKPRTVLDGKALERKQRSALDGPSAGKSGV