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2024-05-18 10:08:58

Gene list

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COG category: Replication, recombination and repair
Organism: Coxiella burnetii RSA 493, RSA 493

Number of genes found: 133

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Coxiella burnetii RSA 493, RSA 493
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA CBU_0006 IS1111A, transposase chromosome CDS6759 1020 + 0.489216
NA CBU_1109 hypothetical protein chromosome CDS1055237 1428 - 0.357843
NA CBU_0554 IS1111A, transposase chromosome CDS502168 1020 + 0.489216
NA CBU_1750 DNA-binding protein HU, putative chromosome CDS1681196 450 + 0.504444
NA CBU_1189 ATPase, AAA family domain proteinRecName: Full=Replication-associated recombination protein A; chromosome CDS1132456 1284 - 0.457165
NA CBU_0388 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS348584 4179 + 0.369466
NA CBU_0954 MutT/nudix family proteinSubName: Full=Phosphohydrolase (MutT/nudix family protein); chromosome CDS904685 747 - 0.400268
NA CBU_0625 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS569281 408 + 0.392157
NA CBU_0523 IS1111A, transposase chromosome CDS465851 1020 - 0.489216
NA CBU_1990 IS1111A, transposase chromosome CDS1898589 1020 + 0.489216
NA CBU_1640 IS1111A, transposase chromosome CDS1580306 1020 - 0.489216
NA CBU_0473 DNA-binding protein HU, putative chromosome CDS416228 318 + 0.446541
NA CBU_0664 transposase, ISAs1 familySubName: Full=Transposase; chromosome CDS605781 1146 + 0.421466
NA CBU_1571 IS1111A, transposase chromosome CDS1519268 1020 - 0.489216
NA CBU_1230 UvrD/REP helicase family proteinSubName: Full=ATP-dependent nuclease subunit A; chromosome CDS1181936 3333 + 0.423642
NA CBU_1090 IS1111A, transposase chromosome CDS1034726 1020 + 0.489216
NA CBU_1112 conserved hypothetical protein chromosome CDS1058109 288 - 0.378472
NA CBU_1961 IS1111A, transposase chromosome CDS1876234 1020 - 0.489216
NA CBU_0040 IS1111A, transposase chromosome CDS36695 1020 + 0.489216
NA CBU_0724 transposase, IS30 familySubName: Full=Transposase; chromosome CDS669705 993 - 0.391742
NA CBU_0061 conserved hypothetical protein chromosome CDS54653 1197 + 0.40518
NA CBU_1717 IS1111A, transposase chromosome CDS1646211 1020 + 0.489216
NA CBU_0392 hypothetical protein chromosome CDS356007 1155 - 0.378355
NA CBU_1677 conserved hypothetical proteinSubName: Full=Hypothetical cytosolic protein; chromosome CDS1611108 435 - 0.374713
NA CBU_1531 hypothetical protein chromosome CDS1481477 876 + 0.415525
NA CBUA0011 conserved domain protein pQpH1 CDS12830 171 + 0.426901
NA CBU_0340 conserved hypothetical proteinSubName: Full=Hypothetical cytosolic protein; chromosome CDS308186 939 + 0.444089
NA CBU_1998 DNA processing protein DprA, putativeSubName: Full=DNA processing protein; chromosome CDS1904012 927 + 0.502697
NA CBU_1544 transposase, IS30 familySubName: Full=Transposase; chromosome CDS1492282 993 - 0.391742
NA CBU_0384 IS1111A, transposase chromosome CDS345078 1020 + 0.489216
NA CBU_0591 conserved hypothetical proteinSubName: Full=Hypothetical cytosolic protein; chromosome CDS541051 825 + 0.414545
NA CBUA0039 repA protein, putative pQpH1 CDS35056 1290 + 0.342636
NA CBU_1898 IS1111A, transposase chromosome CDS1819240 1020 + 0.489216
NA CBU_1759 IS1111A, transposase chromosome CDS1689495 1020 + 0.489216
NA CBU_1492 transposase, ISAs1 familySubName: Full=Transposase; chromosome CDS1444367 1146 + 0.421466
NA CBU_1685 conserved domain proteinSubName: Full=Uncharacterized protein; chromosome CDS1616280 1422 + 0.305907
NA CBU_1742 conserved hypothetical protein TIGR00252RecName: Full=UPF0102 protein CBU_1742; chromosome CDS1676269 363 + 0.38292
NA CBU_1186 IS1111A, transposase chromosome CDS1128768 1020 + 0.489216
NA CBU_1899 methyltransferase, putativeRecName: Full=Ribosomal RNA small subunit methyltransferase D; EC=2.1.1.171; chromosome CDS1820580 582 - 0.427835
NA CBU_1555 transposase, ISAs1 familySubName: Full=Transposase; chromosome CDS1504001 1146 + 0.421466
NA CBU_0175 serine/threonine protein kinase domain proteinSubName: Full=Serine/threonine protein kinase domain protein; chromosome CDS156814 741 + 0.395412
NA CBU_0207 conserved domain protein chromosome CDS193096 276 + 0.333333
NA CBU_0532 comE operon protein 1, putative chromosome CDS477103 342 + 0.406433
NA CBU_0598 MutT/nudix family protein chromosome CDS545874 546 + 0.468864
NA CBU_0715 transposase, IS30 familySubName: Full=Transposase; chromosome CDS661506 993 + 0.391742
NA CBU_0604 hypothetical protein chromosome CDS549964 495 - 0.345455
NA CBU_1679 hypothetical protein chromosome CDS1612446 309 + 0.33657
NA CBU_1785 IS1111A, transposase chromosome CDS1715771 1020 + 0.490196
NA CBU_0021 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS18337 2430 + 0.360082
NA CBU_1551 MutT/nudix family proteinRecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; chromosome CDS1498601 687 - 0.480349
NA CBU_1734 conserved hypothetical proteinSubName: Full=DnaA-related protein; chromosome CDS1669895 714 - 0.407563
NA CBU_1104 transposase, IS30 familySubName: Full=Transposase; chromosome CDS1051234 993 + 0.391742
NA CBU_0910 hypothetical proteinSubName: Full=Hypothetical membrane associated protein; chromosome CDS859205 975 + 0.434872
NA CBU_1086 transposase, IS30 familySubName: Full=Transposase; chromosome CDS1031508 993 + 0.391742
NA CBU_0502 hydrolase, putative chromosome CDS441463 678 + 0.417404
NA CBU_1379 protein kinase, putative chromosome CDS1329044 1056 - 0.375947
NA CBU_2094 conserved hypothetical protein TIGR00250 chromosome CDS1993843 432 + 0.460648
NA CBUA0010 site specific recombinase, phage integrase family pQpH1 CDS11375 1221 - 0.38493
NA CBU_1363 exodeoxyribonuclease I, putativeRecName: Full=Exodeoxyribonuclease I; EC=3.1.11.1; chromosome CDS1312773 1377 + 0.413943
NA CBU_0316 ribonuclease HRecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; chromosome CDS282596 465 + 0.488172
NA CBU_0930 conserved hypothetical proteinRecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; chromosome CDS879827 681 - 0.39207
NA CBU_0835 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS786933 270 + 0.37037
NA CBU_1270 IS1111A, transposase chromosome CDS1220091 1020 - 0.490196
NA CBUA0005 integrase/recombinase, phage integrase family pQpH1 CDS1722 570 + 0.464912
NA CBU_1524 hypothetical protein chromosome CDS1471693 660 + 0.413636
NA CBU_1427 hypothetical protein chromosome CDS1373490 5205 - 0.394813
NA CBU_2007 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1912769 1188 - 0.357744
NA CBU_0670 ATP-dependent RNA helicase RhlE, putative chromosome CDS610590 1236 + 0.4911
NA CBU_1329 conserved hypothetical proteinSubName: Full=Radical SAM superfamily protein; chromosome CDS1275290 1071 - 0.422035
NA CBU_1218 IS1111A, transposase chromosome CDS1163425 1020 + 0.489216
NA CBU_1229 conserved hypothetical proteinSubName: Full=ATP-dependent nuclease subunit B; chromosome CDS1179351 2589 + 0.436076
NA CBU_1591 IS1111A, transposase chromosome CDS1537463 1020 - 0.489216
NA CBU_1076 IS1111A, transposase chromosome CDS1021147 1020 - 0.490196
NA CBU_0985 hypothetical proteinSubName: Full=Hypothetical cytosolic protein; chromosome CDS934557 759 + 0.367589
NA CBU_1934 DNA ligase, ATP-dependent chromosome CDS1850970 2346 + 0.383205
NA CBU_1700 IS1111A, transposase chromosome CDS1633085 1020 + 0.488235
NA CBU_0891 hypothetical proteinSubName: Full=Hypothetical exported membrane associated protein; chromosome CDS842764 939 + 0.463259
NA CBU_1712 conserved hypothetical proteinSubName: Full=Hypothetical cytosolic protein; chromosome CDS1641294 291 + 0.333333
NA CBU_1168 protein kinase, putative chromosome CDS1110854 1557 + 0.360951
dinP CBU_0280 DNA-damage-inducible protein P chromosome CDS252559 1074 + 0.425512
dnaA CBU_0001 chromosomal replication initiator protein DnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS140 1356 + 0.446903
dnaB CBU_0868 replicative DNA helicase precursorSubName: Full=Replicative DNA helicase; EC=3.6.1.-; chromosome CDS821430 1833 + 0.470813
dnaE CBU_1337 DNA polymerase III, alpha subunitSubName: Full=DNA polymerase III alpha subunit; EC=2.7.7.7; chromosome CDS1283012 3432 - 0.435606
dnaG CBU_1595 DNA primase chromosome CDS1539492 1662 + 0.460289
dnaN CBU_0002 DNA polymerase III, beta subunitRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1639 1110 + 0.436036
dnaQ CBU_0317 DNA polymerase III, epsilon subunit chromosome CDS283490 699 + 0.463519
dnaZX CBU_0659 DNA polymerase III, gamma and tau subunitsSubName: Full=DNA polymerase III subunit gamma/tau; EC=2.7.7.7; chromosome CDS602929 1530 - 0.459477
dotC CBU_1644 DotC proteinSubName: Full=DotC; chromosome CDS1582781 825 + 0.466667
fis CBU_0337 DNA-binding protein FisSubName: Full=DNA-binding protein fis; chromosome CDS303992 312 - 0.458333
gyrA CBU_0524 DNA gyrase, A subunit chromosome CDS467161 2547 + 0.451512
gyrB CBU_0004 DNA gyrase, B subunit chromosome CDS4128 2427 + 0.469716
hipB CBU_1738 integration host factor, beta subunitRecName: Full=Integration host factor subunit beta; chromosome CDS1673605 339 + 0.436578
holA CBU_0557 DNA polymerase III, delta subunitSubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; chromosome CDS504608 1020 - 0.444118
holB CBU_0500 DNA polymerase III, delta prime subunitSubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; chromosome CDS440250 960 + 0.417708
hupB CBU_1464 DNA-binding protein HU-betaSubName: Full=DNA-binding protein HU; chromosome CDS1418495 285 - 0.45614
ihfA CBU_1320 integration host factor, alpha subunitRecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; chromosome CDS1267417 312 - 0.448718
ligA CBU_0542 DNA ligase, NAD-dependent chromosome CDS487927 2013 + 0.436662
mfd CBU_1148 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1091438 3474 + 0.425734
mutL CBU_1083 DNA mismatch repair protein MutL chromosome CDS1026287 1725 - 0.428406
mutS CBU_1056 DNA mismatch repair protein MutS chromosome CDS999586 2580 + 0.435659
mutT CBU_0148 mutator MutT proteinSubName: Full=7,8-dihydro-8-oxoguanine-triphosphatase; EC=3.6.1.-; chromosome CDS135489 414 + 0.415459
mutY CBU_0940 A/G-specific adenine glycosylaseSubName: Full=A/G-specific adenine DNA glycosylase; EC=3.2.2.-; chromosome CDS890594 1065 + 0.456338
nth CBU_1697 endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS1629409 657 + 0.414003
ogt CBU_0441 methylated-DNA--protein-cysteineS-methyltransferaseSubName: Full=O6-methylguanine-DNA methyltransferase; EC=2.1.1.63; chromosome CDS389985 516 - 0.48062
parC CBU_1866 DNA topoisomerase IV, A subunitRecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; chromosome CDS1794295 2262 - 0.467728
parE CBU_0064 DNA topoisomerase IV, B subunit chromosome CDS58768 1911 + 0.462062
phrB CBU_1176 deoxyribodipyrimidine photolyase-class ISubName: Full=Deoxyribodipyrimidine photolyase; EC=4.1.99.3; chromosome CDS1117997 1419 + 0.403101
polI CBU_1795 DNA polymerase I chromosome CDS1726293 2688 - 0.442336
priA CBU_1815 primosomal protein N'SubName: Full=Primosomal protein N; chromosome CDS1744998 1989 - 0.433384
recA CBU_1054 recA proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS997796 1032 - 0.469961
recF CBU_0003 recF protein chromosome CDS2723 1104 + 0.432065
recG CBU_0305 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; chromosome CDS271154 2115 + 0.44208
recJ CBU_0506 single-stranded-DNA-specific exonuclease RecJSubName: Full=Single-stranded-DNA-specific exonuclease; EC=3.1.-.-; chromosome CDS446222 1725 + 0.448116
recN CBU_1297 DNA repair protein RecNRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS1250469 1671 + 0.405147
recO CBU_1501 DNA repair protein RecORecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS1452327 696 - 0.405172
recQ CBU_0472 ATP-dependent DNA helicase RecQSubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; chromosome CDS414286 1806 + 0.431894
recR CBU_0657 recombination protein RecRRecName: Full=Recombination protein RecR; chromosome CDS601771 606 - 0.475248
rnhB CBU_1339 ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS1287713 609 - 0.441708
rnt CBU_1704 ribonuclease TRecName: Full=Ribonuclease T; EC=3.1.13.-; AltName: Full=Exoribonuclease T; chromosome CDS1637251 675 + 0.431111
ruvA CBU_1568 Holliday junction DNA helicase RuvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS1515403 603 + 0.499171
ruvB CBU_1570 Holliday junction DNA helicase RuvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS1517858 1056 + 0.474432
ruvC CBU_1567 crossover junction endodeoxyribonuclease RuvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS1514888 519 + 0.512524
ssb CBU_0271 single-strand binding proteinRecName: Full=Single-stranded DNA-binding protein; Short=SSB; chromosome CDS242391 477 - 0.450734
tag CBU_0383 DNA-3-methyladenine glycosidase I chromosome CDS344112 615 + 0.388618
topA CBU_2000 DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS1905417 2298 + 0.431245
ung CBU_0988 uracil-DNA glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS937019 690 + 0.463768
uvrA CBU_0274 excinuclease ABC, A subunitRecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS245376 2865 + 0.45445
uvrB CBU_0518 excinuclease ABC, B subunitRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS459984 2019 + 0.435364
uvrC CBU_1185 excinuclease ABC, C subunitRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS1126352 1830 - 0.473224
uvrD CBU_2054 DNA helicase II chromosome CDS1959167 2163 + 0.460934
xseA CBU_1243 exodeoxyribonuclease VII, large subunitRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; chromosome CDS1194822 1245 + 0.468273
xseB CBU_0468 exodeoxyribonuclease VII, small subunitRecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; chromosome CDS411228 249 - 0.425703
xth CBU_0297 exodeoxyribonuclease IIISubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; chromosome CDS263915 780 + 0.417949