Gene list
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COG category: Replication, recombination and repair
Organism: Shigella flexneri
Number of genes found: 121
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Shigella flexneri | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
S0001 | IS2 orf2, fragment | virulence plasmid pWR501 | CDS | 191 | 303 | - | 0.49505 | |
S0002 | putative resolvase, fragment | virulence plasmid pWR501 | CDS | 485 | 465 | + | 0.509677 | |
S0009 | IS3 orfB, fragment | virulence plasmid pWR501 | CDS | 5742 | 423 | - | 0.536643 | |
S0010 | ISEc8 orf | virulence plasmid pWR501 | CDS | 6200 | 303 | - | 0.458746 | |
S0014 | orf, hypothetical | virulence plasmid pWR501 | CDS | 10177 | 375 | - | 0.528 | |
S0015 | orf, hypothetical | virulence plasmid pWR501 | CDS | 10377 | 378 | - | 0.537037 | |
S0017 | IS3 orf2, fragment | virulence plasmid pWR501 | CDS | 11888 | 120 | - | 0.441667 | |
S0018 | IS21 orf, fragment | virulence plasmid pWR501 | CDS | 12158 | 228 | - | 0.438596 | |
S0021 | putative transposase | virulence plasmid pWR501 | CDS | 13334 | 285 | + | 0.533333 | |
S0022 | IS4 orf | virulence plasmid pWR501 | CDS | 13629 | 1347 | - | 0.539718 | |
S0023 | putative IS orf, fragment | virulence plasmid pWR501 | CDS | 15084 | 336 | + | 0.547619 | |
S0028 | putative transposase, fragment | virulence plasmid pWR501 | CDS | 17861 | 207 | + | 0.444444 | |
S0033 | IS3 putative transposase, fragment | virulence plasmid pWR501 | CDS | 21502 | 585 | + | 0.528205 | |
S0035 | IS100 orfA, fragment | virulence plasmid pWR501 | CDS | 24774 | 432 | + | 0.525463 | |
S0036 | IS100 orfB, fragment | virulence plasmid pWR501 | CDS | 25321 | 663 | + | 0.496229 | |
S0037 | IS1 InsB | virulence plasmid pWR501 | CDS | 25999 | 390 | + | 0.520513 | |
S0041 | putative transposase, fragment | virulence plasmid pWR501 | CDS | 29145 | 366 | + | 0.464481 | |
S0042 | putative reverse transcriptase | virulence plasmid pWR501 | CDS | 29915 | 1218 | - | 0.481938 | |
S0046 | IS3 orfB, fragment | virulence plasmid pWR501 | CDS | 33050 | 408 | - | 0.490196 | |
S0048 | IS150 orfB, fragment | virulence plasmid pWR501 | CDS | 35074 | 246 | - | 0.443089 | |
S0049 | IS150 orfA | virulence plasmid pWR501 | CDS | 35316 | 522 | - | 0.45977 | |
S0050 | IS100 orfA, fragment | virulence plasmid pWR501 | CDS | 35875 | 384 | + | 0.450521 | |
S0052 | IS2 orf2, fragment | virulence plasmid pWR501 | CDS | 37531 | 288 | + | 0.5 | |
S0055 | IS110 orf | virulence plasmid pWR501 | CDS | 39414 | 1197 | - | 0.578112 | |
S0073 | putative IS orf, fragment | virulence plasmid pWR501 | CDS | 51722 | 393 | + | 0.531807 | |
S0078 | IS1650 orfA | virulence plasmid pWR501 | CDS | 58473 | 330 | + | 0.506061 | |
S0079 | IS1650 orfB, fragment | virulence plasmid pWR501 | CDS | 58682 | 516 | + | 0.523256 | |
S0080 | IS630 orf | virulence plasmid pWR501 | CDS | 59312 | 1032 | + | 0.531008 | |
S0082 | iso-IS1-insA | virulence plasmid pWR501 | CDS | 60525 | 285 | + | 0.484211 | |
S0083 | iso-IS1-insB, fragment | virulence plasmid pWR501 | CDS | 60935 | 183 | + | 0.546448 | |
S0089 | orf, hypothetical | virulence plasmid pWR501 | CDS | 67364 | 234 | - | 0.495726 | |
S0090 | orf, hypothetical | virulence plasmid pWR501 | CDS | 67638 | 504 | - | 0.541667 | |
S0094 | IS100 orf | virulence plasmid pWR501 | CDS | 69698 | 663 | + | 0.496229 | |
S0099 | orf, hypothetical | virulence plasmid pWR501 | CDS | 76494 | 300 | - | 0.53 | |
S0101 | IS1650 orfB | virulence plasmid pWR501 | CDS | 77379 | 516 | - | 0.525194 | |
S0102 | IS1650 orfA | virulence plasmid pWR501 | CDS | 77774 | 540 | - | 0.507407 | |
S0108 | IS600 orfB | virulence plasmid pWR501 | CDS | 81597 | 819 | - | 0.510379 | |
S0109 | IS600 orfA | virulence plasmid pWR501 | CDS | 82451 | 303 | - | 0.462046 | |
S0117 | putative IS orf | virulence plasmid pWR501 | CDS | 86376 | 573 | - | 0.507853 | |
S0118 | putative IS orf | virulence plasmid pWR501 | CDS | 86945 | 351 | - | 0.547009 | |
S0125 | IS1353 orf | virulence plasmid pWR501 | CDS | 91521 | 243 | + | 0.497942 | |
S0126 | IS1353 orf | virulence plasmid pWR501 | CDS | 91818 | 282 | + | 0.521277 | |
S0128 | putative transposase for IS110 | virulence plasmid pWR501 | CDS | 93347 | 1197 | - | 0.579783 | |
S0129 | IS100 orfA | virulence plasmid pWR501 | CDS | 94735 | 1005 | - | 0.526368 | |
S0168 | IS600-like, orfB | virulence plasmid pWR501 | CDS | 129282 | 750 | - | 0.521333 | |
S0169 | IS600-like, orfB | virulence plasmid pWR501 | CDS | 130043 | 819 | - | 0.512821 | |
S0170 | IS600-like | virulence plasmid pWR501 | CDS | 130897 | 303 | - | 0.462046 | |
S0171 | IS600-like, orfA | virulence plasmid pWR501 | CDS | 131310 | 303 | - | 0.458746 | |
S0172 | IS600-like, orfB, fragment | virulence plasmid pWR501 | CDS | 131698 | 189 | + | 0.455026 | |
S0174 | IS3 orf, fragment | virulence plasmid pWR501 | CDS | 133589 | 366 | - | 0.565574 | |
S0183 | putative transposase, fragment | virulence plasmid pWR501 | CDS | 138720 | 231 | - | 0.463203 | |
S0186 | putative reverse transcriptase, fragment | virulence plasmid pWR501 | CDS | 140636 | 240 | - | 0.520833 | |
S0187 | putative reverse transcriptase, fragment | virulence plasmid pWR501 | CDS | 140907 | 201 | - | 0.557214 | |
S0188 | IS3 putative transposase, fragment | virulence plasmid pWR501 | CDS | 141022 | 243 | - | 0.559671 | |
S0200 | putative reverse transcriptase, fragment | virulence plasmid pWR501 | CDS | 152066 | 804 | - | 0.549751 | |
S0201 | putative reverse transcriptase, fragment | virulence plasmid pWR501 | CDS | 152882 | 201 | - | 0.532338 | |
S0203 | IS1650 orfB | virulence plasmid pWR501 | CDS | 154397 | 516 | - | 0.517442 | |
S0204 | IS1650 orfA | virulence plasmid pWR501 | CDS | 154792 | 450 | - | 0.528889 | |
S0205 | orf, hypothetical | virulence plasmid pWR501 | CDS | 155287 | 402 | - | 0.41791 | |
S0215 | IS1328 transposase, fragment | virulence plasmid pWR501 | CDS | 161422 | 654 | - | 0.493884 | |
S0217 | putative IS orf | virulence plasmid pWR501 | CDS | 163173 | 573 | - | 0.507853 | |
S0218 | putative IS orf | virulence plasmid pWR501 | CDS | 163742 | 351 | - | 0.547009 | |
S0219 | putative IS orf | virulence plasmid pWR501 | CDS | 164089 | 675 | - | 0.502222 | |
S0230 | putative IS orf, fragment | virulence plasmid pWR501 | CDS | 169609 | 570 | + | 0.577193 | |
S0231 | putative IS orf, fragment | virulence plasmid pWR501 | CDS | 170197 | 381 | + | 0.580052 | |
S0243 | IS4 orf | virulence plasmid pWR501 | CDS | 176449 | 1320 | + | 0.537121 | |
S0248 | IS3 transposase, fragment | virulence plasmid pWR501 | CDS | 179456 | 219 | + | 0.579909 | |
S0249 | orf, hypothetical | virulence plasmid pWR501 | CDS | 179662 | 2913 | - | 0.509097 | |
S0254 | IS630 orfA | virulence plasmid pWR501 | CDS | 187108 | 957 | - | 0.535005 | |
S0255 | IS600 orfB | virulence plasmid pWR501 | CDS | 188076 | 819 | - | 0.5116 | |
S0256 | IS600 orfA | virulence plasmid pWR501 | CDS | 188930 | 303 | - | 0.462046 | |
S0266 | IS600 orfB | virulence plasmid pWR501 | CDS | 197674 | 819 | - | 0.5116 | |
S0267 | IS600 orfA, fragment | virulence plasmid pWR501 | CDS | 198528 | 126 | - | 0.420635 | |
S0276 | conserved plasmid hypothetical protein | virulence plasmid pWR501 | CDS | 207312 | 168 | + | 0.511905 | |
S0285 | IS600 orfA | virulence plasmid pWR501 | CDS | 216081 | 303 | + | 0.458746 | |
S0286 | IS600 orfB, fragment | virulence plasmid pWR501 | CDS | 216419 | 189 | + | 0.529101 | |
S0288 | IS911 orfA | virulence plasmid pWR501 | CDS | 217023 | 339 | + | 0.439528 | |
S0289 | IS911 orfB | virulence plasmid pWR501 | CDS | 217388 | 840 | + | 0.546429 | |
insA | iso-IS1 orfA | virulence plasmid pWR501 | CDS | 175762 | 276 | - | 0.528986 | |
insA | IS1 orfB | virulence plasmid pWR501 | CDS | 169292 | 276 | - | 0.528986 | |
insB | iso-IS1 orfB | virulence plasmid pWR501 | CDS | 175340 | 504 | - | 0.527778 | |
insB | IS1 orfB | virulence plasmid pWR501 | CDS | 168870 | 504 | - | 0.529762 | |
insB | IS1 transposase | virulence plasmid pWR501 | CDS | 38650 | 504 | + | 0.529762 | |
ipaB | invasion protein | virulence plasmid pWR501 | CDS | 104273 | 1743 | - | 0.379805 | |
spa32 | invasion protein | virulence plasmid pWR501 | CDS | 123962 | 879 | + | 0.315131 | |
tnpC | IS629 orf | virulence plasmid pWR501 | CDS | 50368 | 648 | + | 0.546296 | |
tnpC | IS629 orf | virulence plasmid pWR501 | CDS | 43125 | 669 | + | 0.544096 | |
tnpC | IS629 orf | virulence plasmid pWR501 | CDS | 68114 | 792 | - | 0.556818 | |
tnpC | IS629 orf | virulence plasmid pWR501 | CDS | 138070 | 648 | + | 0.54784 | |
tnpC | IS629 orf, fragment | virulence plasmid pWR501 | CDS | 216647 | 366 | - | 0.521858 | |
tnpC | IS629 orf, fragment | virulence plasmid pWR501 | CDS | 141237 | 564 | - | 0.562057 | |
tnpC | IS629 orf | virulence plasmid pWR501 | CDS | 148540 | 648 | + | 0.54321 | |
tnpC | IS629 orf | virulence plasmid pWR501 | CDS | 31835 | 669 | - | 0.542601 | |
tnpC | IS629 orf | virulence plasmid pWR501 | CDS | 178315 | 669 | + | 0.544096 | |
tnpD | IS629 orf | virulence plasmid pWR501 | CDS | 137834 | 354 | + | 0.550847 | |
tnpD | IS629 orf | virulence plasmid pWR501 | CDS | 178100 | 354 | + | 0.550847 | |
tnpE | IS629 orf | virulence plasmid pWR501 | CDS | 137508 | 327 | + | 0.535168 | |
tnpE | IS629 orf | virulence plasmid pWR501 | CDS | 49911 | 327 | + | 0.544343 | |
tnpE | IS629 orf | virulence plasmid pWR501 | CDS | 69120 | 327 | - | 0.541284 | |
tnpE | IS629 orf | virulence plasmid pWR501 | CDS | 177774 | 327 | + | 0.535168 | |
tnpE | IS629 orf | virulence plasmid pWR501 | CDS | 147978 | 327 | + | 0.544343 | |
tnpE | IS629 orf | virulence plasmid pWR501 | CDS | 42689 | 327 | + | 0.535168 | |
tnpE | IS629 orfA | virulence plasmid pWR501 | CDS | 65652 | 327 | + | 0.535168 | |
tnpE | IS629 orf | virulence plasmid pWR501 | CDS | 32718 | 327 | - | 0.541284 | |
tnpF | IS2 orf2 | virulence plasmid pWR501 | CDS | 80254 | 906 | - | 0.551876 | |
tnpF | IS2 orf2 | virulence plasmid pWR501 | CDS | 165520 | 456 | - | 0.495614 | |
tnpF | IS2 orf2 | virulence plasmid pWR501 | CDS | 165950 | 906 | - | 0.549669 | |
tnpG | IS2 orf1, fragment | virulence plasmid pWR501 | CDS | 167327 | 219 | - | 0.420091 | |
tnpG | IS2 orf1 | virulence plasmid pWR501 | CDS | 166813 | 411 | - | 0.506083 | |
tnpG | IS2, orf1 | virulence plasmid pWR501 | CDS | 81117 | 411 | - | 0.508516 | |
tnpG | IS2 orf1 | virulence plasmid pWR501 | CDS | 164711 | 852 | - | 0.552817 | |
tnpI | IS600 orfB, fragment | virulence plasmid pWR501 | CDS | 43833 | 189 | - | 0.529101 | |
tnpI | IS600 orfB | virulence plasmid pWR501 | CDS | 90686 | 711 | + | 0.513361 | |
tnpJ | IS600 orfA | virulence plasmid pWR501 | CDS | 44057 | 303 | - | 0.458746 | |
tnpJ | IS600 orfA | virulence plasmid pWR501 | CDS | 90332 | 303 | + | 0.462046 | |
tnpR | Tn501 transposition resolvase | virulence plasmid pWR501 | CDS | 203504 | 561 | + | 0.655971 | |
traI | oriT nicking and unwinding protein, fragment | virulence plasmid pWR501 | CDS | 190564 | 4872 | + | 0.598933 | |
traI | oriT nicking and unwinding protein, fragment | virulence plasmid pWR501 | CDS | 190151 | 393 | + | 0.562341 | |
ycdA | orf, hypothetical | virulence plasmid pWR501 | CDS | 158917 | 684 | + | 0.559942 | |
yigB | orf, hypothetical, fragment | virulence plasmid pWR501 | CDS | 197451 | 195 | + | 0.482051 | |
yihA | conserved plasmid hypothetical protein | virulence plasmid pWR501 | CDS | 207773 | 591 | + | 0.494078 |