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# Chromobacterium violaceum ATCC 12472, ATCC 12472

>CV1767 probable MutT/nudix family protein
MLHRLIRDDFWTLPGGRVEPDEEAPKTVEREMLEELGETMRCGNLVMLME
NFFAADGQRNHELGLYFQAHLAVDSALPGRAAPFIIEDGGACLEFDWYSR
EQLATLRILPLAVKDLLSGEDRSLRHVVNRE
>CV1020 probable DNA-directed DNA polymerase III (epsilon subunit)
MFAQPCAIIDLETTGGNIARDRITEVGMVLIDGERVERLSWLVNPGQPIP
PFIENMTGISNEMVAGAPPFSAQADELLDRLQGRLLLAHNARFDYGFLKN
EFRRHGLRFQARALCTVKLSRRLYPQHFKHSLDSLIARHGIDMPERHRAL
ADAEAVYRFIRIAEAELGEDRVAHEAAQLLSQPAELSSLPAELQQQIEDM
PDSAGVYALFGADGRALYVGRAPNLYRKALGHFAERKPGHKSHEVRIDEP
VARVEWRECLGEFGARLQELQWLGRLQPLHNPRARMMGEICTLQVQAGDD
GYVRPLPVSARDIDFSRTADLYGLFRHAREARKALAQIALAQGLCQSVLG
VEQVTSRKGAPCAAYRIRRCRGACVGDEGADSHNARLLAALQRLKVKPWP
FDGEVAVVERDEVCGDVTEHLFDRWCYLGSRRNGGELEGTPAFDLDYYKL
LEGWLRRPEPGGELRAPAEPAPAAARAAGRI
>CV4017 conserved hypothetical protein
MWKSLQPQFPLPPRPRGRGRPRLDDRAALNGILFVLTTSIPSEDLPQELG
FGSGMTCWRLLRNWQLKGLWDQLHRKRHPEAILTLTALLRRAAG
>CV1228 conserved hypothetical protein
MEDDDLLPLSALQHYLYCPRQCALIHLEQQWEDNAQTAEGRLLHERADKP
AMETRRGVRTASAMALASPRLGIAGVADIVEFHDWSDGERAYPVEYKRGR
PKAHRADEVQLCAQALCLEDMLGAAIPEGALYYGKTRRRRPVAFDNALRR
LTLETIAAARAMFDSRQTPRMGYEARRCDACSLLERCQPRLLDRAQSVDQ
WLKQQWDA
>CV1405 conserved hypothetical protein
MITDRAMQRAGLERHFTASAFVLNPHHEVLLLRHRKLGVWLYPGGHVERH
ETPDEAALREVREETGIHARLLGERDLALEDEEADVSALHRPYRVLCEYI
ADPKTPHYHLDLIYLCATPERRCPPGREAVEVGFFPRERLDALPMFANFR
RMLEGLYDDQAVWQAVQQGVR
>CV3671 probable methylated-DNA-[protein]-cysteine S-methyltransferase
MDYPVVIAAPFGRLGVRCEAGELRELRFLPAGMALRPPAPGSLEAEVARQ
LDAYYADPRHVFTVPRRLLGTPYQLRVWQRIAAIPCGETRRYQDLSRELS
SSPRAVGGACGRNPIPVIVPCHRVVASAGLGGFNQSTGDETLDIKKWLLR
HELG
>CV2550 probable mitomycin resistance protein
MHPSRCPPPDAATDLLQLPNVGPRAAADLRLLGFNHPADLRGRDPHQLYL
RLCDATGERHDPCVLDVLMSVCHYMDTGEARAWPSFTAERKRRWTV
>CV2316 probable transposase protein
MATTPTRSDVRHRLFRRVVPQDSGRRDVENKAVYLALGIRADGRKEVLGL
WVEQTEGAKFWLKVFNELKNCGLDDILIAVVDGLRGFPEEIKAVFPQAQI
QTSIVHLIRNSLNLASWKDRKGLAAVLKPIYQAATADAAAALLDEFAEGD
WGRKLPTVPAMWRRQWEQVVPFFAYPSEVRKIIYTTNAIESMHMQLRKIV
KNRGHFPSDEAASKLLYLALRNIEKDWRMPPITWKQAANQFAILFGERFT
DVLCLTDLSTQNS
>CV2359 probable uracil-DNA glycosylase
MSALADLLGEIAACRVCEAALPCGPRPALRAAAGARILLAGQAPGRKVHE
SGVPWDDASGKRLREWLAVDAETFYDPECFAIVPMGFCYPGTGPSGDLPP
RPECRRLWHPRLLPLLERVELVLAVGYYAQAYHLAARKRSLTETVAAWRE
YFPAVMPLPHPSPRNQMWLARNRWFESELLPALRARVAEVLGR
>CV1923 probable transposase
MPQARLLGSQLLPLAQQIRRNECLGGQASQGAGDRECAPEKTLGRDHARE
RDCQRSPEKKVVSAPSRRELVRHLVGKGLSERKSLRLAGMSPSSFRYQPA
TDRNAVLKAKIIALAQRHRRYGAGMIYLKLRQSGMVVNHKRVDRLYAEAG
LQIRRRKRKKIPVADRHPLARPLAANQVWSMDFVFDRTAEGRVIKNLTVV
DDATHEAVAIVPERAMGGLHLTRVLDQLAQTRGLPKAIRTDNGKEFCSRA
MLTWAHARGVQLFLIEPGKPNQNAYIESFNGRFRDECLNEHWFTSLRHAQ
VVIEAWRREYNNERPKKALGGLTPAAYAESLAEKSGQLSPDSKALCY
>CV1928 hypothetical protein
MNVLEDRKNERLPSDLARRATAIIEMPDGVLVTASRGGRYNLPGGKANRG
ELRSQALIREIREETGLRINSMLYLFDHITPFNAHKVYLCIAQGQPKPQN
EIERIALVSSPDTDMDLFVEGRAILRRYARLRNEETAKGEALRALLGLAR
YIAKVD
>CV2667 conserved hypothetical protein
MPNYRRWRVPGGTYFLTFTLLERGSSLLVDHIDALCEAVRLTRCERPFHI
DGWVVLPDHVHCMITLPPGDDDFSNRIKAIKIRFVRAMPALEYRNPARCR
NRERGIWQRRFWEHCIRCEADYAAHLDYIHINPLKHGLVSRVQDWPFSTF
HRAVKRGLYPQDWAGGDDLMSVSAFE
>CV3076 hypothetical protein
MIKPSSSAWLLLLLLPGLVYAALGQRIDLSSSAPAAGRQQLAVTTGAAYR
VVQEQDAAGRVIRQYVAGDGTVFAVAWSGPTLPNLQQLLGDYFPAFRQSQ
QANRRGLNAMQGQVGSFVVQSRGRLGNFSGFAYDSALLPAGVAIDQLK
>CV2805 conserved hypothetical protein
MKQSKFAEEQIAFGWRQTESGITITEVCRKMGASEATFWGAGADTAAEQT
FC
>CV3857 conserved hypothetical protein
MEGIPGQRDGVYWLPPAEDGKDPATPWWLCSPLHVLAETRDASQSNWGRL
LEWRDNDGHPHRWACPVEMLAASDTAEFRRELVRGGLTMSTSQKARQKLV
DYVLSHRQAAATRLRCVSRIGWHDVRYVLPGEVHGEQDGEGVIYQGADSG
DFDRAGTLQEWQTHIAAAAAGNSRIVFAISVAFAGVLADMAGESGGGFHF
VGTTSKGKTSTLLDPAASVWGNPDQFAKKWRTTQNGLEGLCLGRNDNLLI
LDELAQIAPADAGGAAYLIANGQAKARMTKEGGNRPAHTWRVMLLSAGEI
DLAQHMAEAGKSAKGGQIARLPAIPADAGAGMGTLEQLHQHPSGQAFADA
MKAYSRQYYGTAGPAFLAALTPPECMDEIRRDIKDGVTGLIEYLGVPAGA
AQEVGRVAARFALVAFAGELATRYGVTGWKPGEAVQAARRCFREWLAENH
TGMAADDRALFAQVSGFMQTHSSTRFPPHDAAPEVLARYLNRAGFTFIDE
QGTQQFWVLSEPFKKELCRGYTPLIAARSLLRAGWLLAGDTEGNTRRHTR
KKRIKALDSATVNVYVLTSTVLEGEE
>CV2211 conserved hypothetical protein
MAEQDGKRCFPPVADGDTRLLILGSLPGDASLAASQYYAHPRNQFWRLLG
DVLGRDLAALPYDARLAVLRAAGVGLWDVVAQARRKGSLDADLRDIRHND
LADFAASLPSLRAVAFNGAAAAKAEAQLAGLGLAVARLPSSSPAHTQAYE
AKLAVWRQLERYLDLSA
>CV1227 conserved hypothetical protein
MSLANRYEFVYLFDVSNGNPNGDPDAGNLPRLDPETNQGLVTDVCLKRKL
RNYVALEKENEPGFAIYMQEKSVLNHQHKRAYEALSLEPEPKKLPKDQAK
ARELTAWMCKNFFDVRAFGAVMTTEVNAGQVRGPIQLTFATSIDPVVPLE
VSITRMAVTNDKDLEKERTMGRKHIVPYGLYRAHGFVSAKLAERAGFGEE
DLQLLWRGLINMFEHDRSAARGEMTARKLIAFKHECALGNAPAHRLFDSV
RVSRADGAGDSPARGFTDYRVELDRAVLPAGVEVLELL
>CV3385 conserved hypothetical protein
MGDRRLAVARFCFPGGQLEEFGQCEAGLPLPAAQRKQRASIVIIENGRLL
LMRRVKPGKEYYVLPGGNIKRNETPAMACVRETREETGLNVWLEEGPLCV
LESESRTEHVFVAREHRGMLRLGGPELAKLSPDNHYELVWLDAEALAMVK
LRPKSLRPHCLARLGAVDGTRA
>CV0645 conserved hypothetical protein
MAFPCPLCGAVSRVRTSRMLTATAKEIYYNCSNDDCCHQYKTMESEPRTV
AQPIKGGAQIPPERLRTLSSLAKPAPPPALTVQVGRIQHRVLK
>CV3851 probable prophage integrase
MGKLTDMQIKAWIKAGERFEGRGDGDGLWLRFRENDKVPVWRYRYKFAGK
SRTMQIGSYAELSLAKAREAVKSLSARVALGHDVAAEKQEKKSAALAKIE
EEKNAVTMLALANEYYERMILGRWKHPDIVRRRIDKDIGPMLGKMKVEDI
KPRHIDDMLQTIVKRGAPTIANDVLRWTRRMFDYAIKRHIIEINPASAFD
LGDAGGKEEARERALSRDELAKLFQAMKLARGFSVENDLAIRLLLLLCVR
KMELCAARKEEFDLPAGVWHLPGERSKTGKPIDIPLPALAVEWLQQLFDL
AGPSAWLLPARKMQHRMVPHIHEGTIGTALGKVKPHMPDVAAFTIHDLRR
TARTHLAELGVDPVVAERCLNHKIKGVEGIYNRHDYFNERRDALNKWAGL
LDALDKGEAYNVTPITKGRIKTA
>CV2751 probable exonuclease
MRQRVAVIDFETNGATPGGDCRATEIGVAMVEDGRVVDRFHSLMNAGVWV
PPMIERLTGISNAMLKDAPPAERVMRDAAHFVGDAPLAAHNAGFDRKFWD
YELGLLGLSRRQDFACTLLLSRRLLPQAPDHKLGTLARWAGLPDTGRAHR
AMADAEMAAQLMLLLGDTLSRQFHLADIDHALLCKLQKVTAAKVKPYLRE
LQAATAA
>CV2111 probable methyltransferase
MLQIPASPIVPWIGGKRRLAKHILPLFPEHTCYVEPFCGAAALYFLKEPA
KAEVLNDVNGELVNLYRVVRHHLEEFVRQFKWALSSRQIFKWLQITPEET
LTDIQRAARFFYLQRLAFGGKVEGQTLGTSTTSPPRLNLLRMEEDLSAAH
LRLSRTYIENLDWADCIKKYDREHTLVYCDPPYWGTEGYGVEFGLHQYQR
MAELARSMKGNMIISVNDIPEMRQAFDGLAIDRVDINYSVGGGGRSKERK
GELIIRNW
>CV1229 conserved hypothetical protein
MRRQLNTVYVTTEGAWLRKDGENLVMEVEGSERARLPVHMLEGLVCFGRV
LVSPPLMGFCAERGIVISYLSPNGRFLARVEGPVSGNVLLRRAQYRASDD
GPASASLARHLLLGKLHNQRAVLSRALRDHGEGLKNEARSELEQARKRLS
RLADKLWHVDDLDALRGVEGEAAQNYFAVFPHLLRMDDPALRFAGRSRRP
PRDPVNAVLSFLYTLLTHDCRSALESVGLDPTVGFLHRDRPGRPSLALDL
VEEFRPVLADRLALSLFNRRQLAAKDFRGQDNGGVLLSDEARKTVLVAYQ
ERKRDSLLHAYLDEKVELGLFPAIQAQLLARHLRGDLDAYPPFLWK
>CV3910 conserved hypothetical protein
MAFDFGERRIGVAVGDTILGIPHPLATIDTAVTDERFAAIARLIEEWQPR
QLVVGLPMHPDGEEHELSALSRRFANRLKGRFGLPVWLVDERYTSVIAEQ
LLEEAGVKKGRKQKPALDQVAAQAILAGWFEQPGTAV
>CV1756 conserved hypothetical protein
MSEPFTPGDLKTILHSKRANLYYLEHCRVLVNGGRVEYVTDAGKQSLYWN
IPIANTTTLLLGTGTSVTQAAMRELAKAGVMVGFCGGGGTPLFSAGEVEM
EVAWQSPQSEYRPTEYLQWWARFWFDDDKRLQAAKQLQQARLARIRAQWL
DNRQLREAGFEIEPSRLTQLLDASLASLERAPDHTALLTEEARLSKQLFR
LAAQATAYGEFTRAKRGGGVDPANRFLDHGNYLAYGLGATAAWVLGLPHS
LAILHGKTRRGGLVFDAADLVKDAAILPQAFVSAMKGDDEQTFRQQCIEQ
LARGEALDFMIDQLQRIAEQLGRDG
>CV2581 hypothetical protein
MNEMTQLKSMIDGLKKRRMGFKKQLDDFKALQGEIAALEARAESDPVARG
KLQKLEAMMKSGGEQLHQQIVSKVAMAEKTFSQLGKQLKQLAPEDDAKAS
AMAEPVKAAPVLAKKHRRSFV
>CV1376 probable ATPase associated with chromosome architecture
MSDLFSVEPQKPLAEALRPQALDQVIGQQHLIGPGKPLSLAVASGKPHSM
ILWGPPGVGKTTLARILAASFDAEFIPISAVFAGVKDIREAVEKAHAVLQ
RSGRRTILFVDEVHRFNKSQQDAFLPFVESGLITFIGATTENPSFEVNSA
LLSRAQVYVLNSLSEDELKQLFARARTEGALDGLNFDDAAVSTLTGYADG
DARRFLNLLEQTRTAAQARGVADIDPGFLEEVLTLNARRFDKGGDAFYDQ
ISALHKSVRGSNPDAALYWLSRMLDGGADPRYLARRIVRMAWEDIGLADP
RAMQIANDAALTYERLGSPEGELALGQAVIYLAVAAKSNAGYKAYNEARA
FVKQDKSRPVPVHLRNAPTRLMKELGYGHAYRYAHDEPHGYAAGETYLPE
GLEDIEWYRPVPRGLESKIQDKLAFLRQLDADAQQDPDSEKQE
>CV4390 conserved hypothetical protein
MLRCADGALYTGVSTDVARRYRQHQAGKGARYTRLNPPLAVELVIEYPDR
SAALRAEHAFKRLSAAAKRDFLRAHGDAGPSS
>CV0004 probable transposase
MPQARLLGSQLLPLAQQIRRNECLGGQASQGAGDRECAPEKTLGRDHARE
RDCQRSPEKKVVSAPSRRELVRHLVGKGLSERKSLRLAGMSPSSFRYQPA
TDRNAVLKAKIIALAQRHRRYGAGMIYLKLRQSGMVVNHKRVDRLYAEAG
LQIRRRKRKKIPVADRHPLARPLAANQVWSMDFVFDRTAEGRVIKNLTVV
DDATHEAVAIVPERAMGGLHLTRVLDQLAQTRGLPKAIRTDNGKEFCSRA
MLTWAHARGVQLFLIEPGKPNQNAYIESFNGRFRDECLNEHWFTSLRHAQ
VVIEAWRREYNNERPKKALGGLTPAAYAESLAEKSGQLSPDSKALCY
>CV1112 probable (di)nucleoside polyphosphate hydrolase
MLDRDGYRPNVGIILTNAKNEVFWGKRVREHSWQFPQGGIKPGESPEAAM
YRELLEEVGLLPQHVKILGRTRDWLRYEVPTNWVRREWRGSYKGQKQIWF
LLRLVGRDSDVCLRATNHPEFDGWRWNDYWAPVDAVIEFKRDVYERALSE
LARFMRGVESHHAYLARTSTQSEQ
>CV1939 hypothetical protein
MASPLTLMMPVAPNADLIALASTVSENQTKLHEALTKIGTVHYARTLLLD
RAVANLQPGINSSQNYVLAVITEYDGSFDKYIQDFVKEVGPIFDALLQFV
DGASKLIPVANNTAAFTAFIAKNDASQHDLNQGLYQAYDATVQTILASLP
>CV3401 probable MutT-like protein
MIVNNKPRQWKPNATVAAIIERDGRFLMVEEETPAGLRLNQPAGHLERGE
TLLQAVAREALEESGWLFAPRGLTGIYLADAQDGDVTYMRFAFHGDATPP
AAPPRLDAGIVAVHWLSFEDIAAQQTRLRSPVVSQCLQDYLNGIAYPLQL
IRDLR
>CV0220 probable methylated-DNA-[protein]-cysteine S-methyltransferase
MEAMLSADAEAGRDYARVRDAIRYLVAHAGEQPQLAEVAAALCLSESRLQ
RLFSRWAGVSPKRFIQQLTCEAAKARLAAGAPVLPLSHELGLSGGGRLHD
LFVTLEAMTPGEYQQGGAGLDIAWSVESTRFGPVLLAQTARGVCALQFLS
GDGEAEAWLRAQWPRAALRHVPGQGGALCRRLFDPLAEADGPPLALRVQG
SNFQIQVWRALLTVPYGGLIGYGQLAEKIGRPGAARAVGNAVGANPVAWL
IPCHRVIRAEGAVGGYRWGEERKLDLIGWESARLSREEATA
>CV0065 probable SWI/SNF family helicase
MTEPQPSSRLIWRLRLADSGAQLQPLLQSAGPDGWSRGRACSLASLLQEQ
AEAVRPHDLPVLKPLLALWQAHGGDAGLVDAAPLLPALIDHPLLFDAEAP
ARRIRVEAGQPALQMERVGAELRLKLLPDGLAGCCGALWQRPQPERLLVY
QLTDELKALADLVGHGLTVPWQARQRVLEAIREVAPGLPLVDASPAFDPA
LASEAADPALYALLTRQPEGLRLQLKVKPHPAAAWSAPGRGAAGLVLDVD
GEYRQFVRDLAAEAGRLRALREACPAIARGQRDGDGWLFADQHTALSLLS
QLQAAGEDRVICLWPQGDKIRLAAADGMPQLKLKVKRRGGWLQADGELEL
DDGRILTLRHLLAALANQKGKYLQLSDGDWLMLSGSLGERLGELARMVDH
AGPDGLAISPLAGPRLQALGEDAGQFDGDDGWQRQAARWREAAVFDPEVP
ATLNATLRPYQLQGFAWMARLAHWGVGACLADDMGLGKTVQTLSLLLTRA
HLGPQLAVAPTSVALNWLAEAARFAPSLRLRAYHQHRRLDDVGPGDLVVV
SYGLLQREAEAFCDVHWASAVLDEAQAIKNPQSQRAQVAQSLRADFRLAA
SGTPVENHLGELWSLFRFIAPGLLGNLAQFEQRYAQPIADGDDTARAQLK
ALIQPYLLRRTKREVLTELPPKTETTRLIELSEQERHVYEAMRQEALARV
AEADPAAGGQTMQALAELTRLRRFCCHPKLTQPDSALPASKLAAFAEICE
ELLDNGHKALVFSQFVDHLALVAEHLRQRGVRFHYLDGGTPSRQRKASMD
AFQAGDGDLFLISLKAGGTGLNLTAADYVIHLDPWWNPAVEDQASDRAYR
MGQQRPVTVYRLVAAGTIEEKIVELHRDKRALADSLLAGGDASASMDGEA
LLALLRGEAG
>CV3869 probable DNA-binding protein hu-beta
MTKAELIALLSDKSGLTKADVLRVLGAFDEVLLDTLADNGEISIVAGKFK
VKETAARTGRNPKTGETIQIAAKRKVSFVASKQLKDRIA
>CV4202 conserved hypothetical protein
MSQTRNKVRIIGGDYRRRLLPFPEAEGLRPTPDRVRETLFNWLGQDLYGK
SCLDLFAGSGALGFEAASRAARRVVMVEKSRKVHEALQANRRLLQAGAID
VVAGDALLYLKSSRESFDVIFLDPPYDSDLLQQALPLALARLSEEGVLYV
EARQWPDALPDGVETLRRDKAGMVQYGLLGRSAQ
>CV0126 conserved hypothetical protein
MPNYRRSWMPGGTYFFTVALWQRHGNDLLVRHVDALREVVRAVKAAHPFV
IHGWVVLPDHLHCVWELPADDADFALRWRLIKMMFSKRIEKGENLSLSRA
QRKERGIWQRHYWEHQIRDAADLQTHVDYIHYNPVKHGYVAQVMDWPYSS
FHHYVRQGWLPADSAGENAAMAEGMTM
>CV2089 probable ATP-dependent RNA helicase
MESQLAACAREVFAVDGVDPLRALSAFMAKYERARVRCTIALDRVAAARS
RQSADKAAAKTRDAVNLSRYPESFATAYAMQRHFIAVLGPTNSGKTHAAM
EHLQKAKSGVYLAPLRLLALENYTRLQQAGVAVSLITGEQRKLHPDATHV
ASTVEMLNPERQVEVAVIDEIQLLDDPDRGAAWTAAVCGVPAQTIYLVGA
PESREAIESLVARVGGTLEVRTLERKTALQMDKAPLLSLKNLKPGDVLIA
FSRREVLNWRDKVIEQGLSVSAIYGNLSPEVRQAQAERFVAGETQVVVAT
DAIGMGLNTPARRIIFTTASKWDGYAEGVIAAPLAKQIAGRAGRFGKHET
GYVAGFDGLTHKTIGALLRQKPEALPNNGFFVAPSLKYLEAISQATGEIR
LKQLLSLFTKHINVHDEFFLPANLSDQMEKAEWLDALPLSLADRYTFSLC
PISTKIPMLENALHDWAEQRARGKAAPLLRMMGTGGRNELQYLEDSCKLY
AAYAWLGYRMPETFPDGEMAQMLMLSTSERIDGLLQVQNAQKRKGRRGSE
PARRGAGGGRRR
>CV3849 probable serine/threonine kinase
MGGFSVVYLALDDDDRKFAIKEYLPRNLAERKDDGGVTVPHDLDRDAFNL
GLKCFFEEGRVLSGISHPAVVRVSNFFRANQTVYMVMEYADGRSLGRELE
LAGGRMEERLIRKWFAALLSGLREVHSRRLLHLDIKPANIYLRRNGVPLL
LDFGASRQTLARQDKHFAAMYTPGFAAPEQYDKSQPLGPWTDIYAIGACL
YVCMGGATPQPSRERCEQDLLAPASQVFRHRYSRELTGLCDRCLSLEPNL
RPASVLEIQKSLQQTEYSQPERPPAGEGSRLVGWIKGLAGGRHREGSE
>CV1586 probable MutT/nudix family protein
MWSMEADKAAALIAGRLQSYDFTGRVADLPYRAASPGLKPAAVLVPLVWH
ADGATVLFTRRTEHLSSHPGQVSFPGGKLESGDASAQAAALREAREETGL
PESSVWVLGNLPDYVTVTGYVVTPVVGLLNPPLALAPAPDEVAEVFEVPL
PLLLDRQAYSRHDYVRDGVAGQYLSLQWDRHTIWGATAAMMWMLADALGG
ASV
>CV1399 conserved hypothetical protein
MSDVAATRERVRIQKVEVLSDDWYVLRKTTFDYRRRDGSWQTLSRETYDR
GNGAVILLYNRARRSVILTRQFRFPAFVNGHDGMLIEACAGLLDQDDAET
CIRRETEEETGYRIDNVRKIFEAFMSPGSVTEKLFFFVGEYHARDKVGDG
GGVAADGEELEVLELPLQQALAMVDCGDIADGKTIMLLQYAQLHRLLD
>CV0654 conserved hypothetical protein
MNQAGRDAEDRALALLEKRGLKLVARNWHCRGGEIDLIMRDGDALVFVEV
RHRGGSRFGGAADSITAAKQRKLLLAAEVYLSSHNIDSPCRFDAVVSVGG
DAPQWLKNVITQ
>CV0628 probable deoxyribonuclease
MRFDPLPAADCLIDSHCHLDAPELAPDVDGVVARARAAGVGQLLVPAVTA
GAFADVLAMRERYGCWIAFGLHPIYLDRHLDEHLDLLDAALAAHAPVAVG
EIGLDFYLPALDPARQEALLVEQLKLARKHGLPVVLHVRRSVDRVLKYLR
EQRIECGIAHAFNGSEQQAQAFIRQGFKLGFGGAMTYSGSRRIRALAATL
PLSSLVLETDAPDIRPEYAQDVPNEPFQLARFIEVWAGLRGMQVAPLRRA
LRDNTLAALALN
>CV3831 probable DNA transport competence protein
MKKLFAVFAALLLLCNVAWAAVNLNTATPQQLEALKGIGPAKAKAIVDYR
TKNGPFKTVDDLKKVSGIGDKTLESLRKEVTVGGAAVPAAKPAAAKPAAA
KPAAK
>CV3720 conserved hypothetical protein
MLIDSHCHINFPDLAERMPDVLANMRQNQVTHALVIGVSRPKYPQVLALA
EAHPNLYATVGVHPDDPEAEEYSEDELVALAGHPRVVGIGETGLDYHWCK
GELDWQHQRFRTHIRAARRVGLPLVIHTRESAEDTIRIMREEHAEQCGGV
MHCFTETWEVAEAALALGFYISFSGVVTFKNARQVQEVAQKVPLERMLIE
TDSPYLAPVPFRGKTNEPAYVRHVAEFIAGLRGIPFEEVAQATTDNFFRL
FAKAAR
>CV2488 probable site-specific recombinase
MCETPGQTDALAALIAALRPGDRQPHQQATVNLQALSFLLEHHPEFREAL
RQALCTLLAESRQIPLYTDAGILANDGFGTTLLHRLGERALPMPYNPDSL
RDRFGLLFSDKQDYLWLEAVPDATWHALWRAMAWQEAPRQDSARQTRLQL
LESVQVLSARITAIGLEPELVRVCPEVERFASPFMHLSAEVQRYADGYRQ
ALIDGVEPPEDEKQVLVLVEQCEAILGKVRKNAARYGISVNLTYHGLRLA
QSIARLRALLELLSPEHDPAKRPQLFRLLVDFARAENRKYSLRDLFKSNT
ELLALQVTEHAGRHGEHYIAEDRREWSKMGKAAMGAGFIVGFMALIKLML
ARGHLPLLWEGIAFGLNYAIGFIIVQILHYTIATKQPAMTAARLAAVLQA
QYGRKQQLEELAELIVKVVRTQFVAIMGNVLLAIPTAALIALAWGALFGA
PVVDAAKAHKLLHEIDPIHSLALPHAAIAGVFLFLSGLIAGYYDNKAIYR
RIPERISGHRLLKRVLGENRAWRLGNYIEHNLGALAGNFYFGMFLGLTGT
VGTILGLPLDIRHITFSSANLAFASVALDFQVPLSVVLLGCAGVALIGVV
NLGVSFFLALWVALRSRKLSGSLLLPLIPMLAKRFLRRPLGFFLPPPPEP
ATAVDAPPADETRN
>CV0328 conserved hypothetical protein
MSPLPPGVVAGACFFFTVATTRQHAVLIDEMVRVALRRAIVAVRSARPFR
IEGWVLLPDRMHAIWTLPAGDADHGSRWREIKRKVTRLVGAHYLRTDGRP
GREREALWQQRYELRRLDDARELARHLDFLHYSPVRHGWAERVRDWPYSS
FHRHVIGGRYPPDWMEGQVG
>CV2274 conserved hypothetical protein
MLGFNGERLDPASGAFHLGNGYRAYSPALMRFHCPDSLSPFGASGVNPYA
YCAGDPANRADPSGHLSWQAWTGIGLAVASLALAAFTAGTSIIASGGIVA
ALESASAITLAEGGLAVVSDMTAIACGAMEASDPQAAAALSWVSLACGAM
GMVHAGYGAVRGIDRKLGAFLQENSRFLGKITRGERDSLGIPLGGGLTKC
FRPASEMEGASAGIALGRLHRSSSTPDMEAFLALPAAKRKRIGSGVSGVV
YEAGRGWVVKIAIDPLPIETMEREAEIFRAVHGPRSALVAENMLWMKRIP
GVPVNTLNLLADEKAEMWQKTLAEVKRLQEMGIHHGDPSWNNLLFDQQTG
TVSFIDFGKSRYLDGFAPAT
>CV0364 hypothetical protein
MSETAPLTPQPCPKCGARAELVKAGSRRIWVQCSRYPDKGNCPAIGAQAD
NKKEAILNWNRLR
>CV2156 conserved hypothetical protein
MSMTPEVREVLRGLAGKLDAARYGEQTALVQEAAVFLGWSPQTVYRQLKQ
AVGWKSGRKPRSDKGSTMVAEEALVTLGAVQREAIRDNGKQTLFTTTARG
MLEQNGIELKVSNSQLNRLIRDRKLNVAAQRCADPVQALRAPHPNHTHEI
DPSLCLVYYLKGRQHIMRDRDFYKNKLENFAKVKFKVWRYVLYDKASGVI
VPWYCESAGENQHKLFEFLMFAWGEQPGRLFQGLPRFLLWDKGSANTSAA
IKNLCRALGVETLEHQAGQARVKGGVEGANNIVETQFESRLRFEPVESIE
QLNHAAIAWSRAWNANLIPGQDTRLRRTGLAEPVARIDLWQLIQPQQLLL
LPPVEVCKAFMTAKEEIRKVRPDLTVSFKHPQAERTAAYSLRGLDGVNVG
DEVRVNAMVFGDCAIQVAVSVYNGADRVYQVEPERAYDAYGQLLSAPVIG
EAYKSMPQTAIEHAASAMDGQAYPGMNAEEIKAARAKKATPFDGALNTHS
YLQDVELPAYLPRRGTEHALAAPAIEYPPLTLIEAAKQLKQRVTAAGGEW
TQNRFQWLAQRYPAGVPEDQLAALVAELTSPAAGTKSPLRVVKSA
>CV2292 hypothetical protein
MPHTMSSSINLNTRQSAFSLSNERAARMMSGDKQTATHMGLWDRFKDLFR
SEKKQDALNALFDLVNSQQGPARSFHVFNQLAQMAAPDNRTLFTVALTSD
LAGCKASYCISGHPVRTEQVSPEEREVMLARLGVPPGGEHVLTQASSLDD
CRLEITPHQLNALRDADFGAGGVHKRFHAATGVLQARDNIGREDFVRESR
LQEYAESRPDLQHYISTQRQIDAPPGVSDKFAYAQVPLYDSARVASRELD
AALPKLSQDQARSMAAQLVDMARAFYCNQLSHRDLHMQNLLVHERLEDGA
VFLKAIDFGRAKFGGAEFEADRFNDIDYLFDRQGCSLAETVGRNYLAGKE
SAVAKKHYPLHKLLERFNNRGADVTETLSGIGQRLKADLRMAGDDPARID
QAFASAAVETQTALSWGARPR
>CV0957 probable TIS1421-transposase orfB protein
MTATRLAAQRSLGSASSDIAHAASTGRVLPAPGGGQKTGPKPTDRGKCGS
KRHIIVDRRGLPLALSMTGDNRHDSMAFETLVDAIPAIPGLPGRPKQKPY
KLHVDKGYDYRRCREHLSRRGVLVRIARRGVESSEKLGRHRWVVERTYSW
LAGFGKLRIRFERRLDMHYALLKLAFSLICLRFIDRFC
>CV3705 probable oxidoreductase
MDSRLAMFAPCPRGLEQILADELLALGAGDIAPADGGVAFAGDARLMMAV
NLHSRTASRVLLRLAHGGYHAEQDIYRLAMSVDWPRWFEVSRTIKLKADG
IAARVKSLDYIGLTVKDAICDRFRQAHLGRPSVDTRHPDVRVNVFLTADE
ATIYLDTSGEPLFKRGWREETGEAPLRENLAAGILLLAGYDGSQPLLDPM
CGSGTFLVEAADIALNRAPGRARRFGFEALSSFDSAAWEKLQQDARKAEQ
PASSLAIRGSDRSQAMVNIARANLERAGLAELVEVSAADVTASRPHAEHG
LIVSNPPYGVRLEEQDQLAAWYPELGDWLKAHFAGWTACLFSGDLRLGKL
IRLAPKRRTPLFNGSLQCRLFVINMVEGSARKQKDGDEAEIETGDEQ
>CV3454 probable DNA-directed DNA polymerase, bacteriophage-type
MSRASLLQQEMGLGPAWMARGGWFEQHPAQRLREQTQADDAESGMPDPAL
EPRSLIPAPQETASVAPPASNFSPPEQPQPAAEPLRAEVATESPLLDWPQ
LQRKVSDCQDCRLCETRTQTVFGRGNPQARWMLIGEAPGENEDRQGLPFV
GRAGQLLDNMLSAAGLDREQDVYIANVLKCRPPGNRNPAPDEIAACNGYL
LQQIRHIQPTLIVALGRFAAQTLLETESSIGRLRGKVHRYQGLPLVVSYH
PAYLLRNQPDKAKAWQDLLLARKVFLQASS
>CV1230 conserved hypothetical protein
MMVLVSYDVRTQDKEGAVRLRKVARACRNFGQRAQYSVFEIEVEPAQWVL
LRDKLCALIDPKQDSLRFYYLGGNWKQKVEHVGAKPVLDLQGPLVF
>CV2224 probable transposase
MPQARLLGSQLLPLAQQIRRNECLGGQASQGAGDRECAPEKTLGRDHARE
RDCQRSPEKKVVSAPSRRELVRHLVGKGLSERKSLRLAGMSPSSFRYQPA
TDRNAVLKAKIIALAQRHRRYGAGMIYLKLRQSGMVVNHKRVDRLYAEAG
LQIRRRKRKKIPVADRHPLARPLAANQVWSMDFVFDRTAEGRVIKNLTVV
DDATHEAVAIVPERAMGGLHLTRVLDQLAQTRGLPKAIRTDNGKEFCSRA
MLTWAHARGVQLFLIEPGKPNQNAYIESFNGRFRDECLNEHWFTSLRHAQ
VVIEAWRREYNNERPKKALGGLTPAAYAESLAEKSGQLSPDSKALCY
>CV4072 conserved hypothetical protein
MQVDAVLGYLDKVSRFDAQQFTPLFIGTERMGCVNAQWKERLLQHEPQLF
EETFQGLKCKVKGSYRSISHALAHAARRWQQAGWLNGWRNENFTAFRQDG
SPYFELERAAFRPLGLTSRAVHVNGLCRMEDGETRMWVGRRSPHKAVDPN
RMDNLVGGGVAAGETLELALQRESWEEAGVARERVDGLKPSSLLLAQRPV
ARGLHREWLYAYDLWLAPGESPACQDGEVAEHLLLPFSEVEQLLVAERFM
IDAALVSMDCLCRHGYWGRDNQKMADALARVRHELGREVGVPA
>CV2396 probable integrase/recombinase protein
MLPDVFRADTGSRSLIQAQSDAQAVLTWLAEHADRPATLAAYRKEAERLL
LWLAPRRQTLAQVKREDVLDYRRFLASPHPAEQWLGPARPRSHPDWKPFS
KPLSPASVEHSLTVLGALFAYLNDAGYLNGNPFKLLRRRGARKSAQEIER
FLDADCWRHLQATLNGLPRGSDREIRHAERALWLFTLLYLTGARRAEAAA
ARACDLARRNGNWWWHVVGKGGVSARIPLSDELMDALARYRLSLGLPPQP
AADEDTPLVCRVGSKGQAKPLSDKAIYLVCKEVFGRAQAAAPNEDIRAKL
RAASTHWLRHTAASHQLEAGVPLLLVSQNLRHASIQTTRRYLHSEEDARH
EASRLHKLKRDS
>CV2593 hypothetical protein
MVQNTSRLYHTQNRVDASSSVATIQKSGEKTLAESPFAPLMNLFTAIQMK
SGLESAGQDWTKDDFIRDLYQCCLKLIPSLPSELKENGKLSDGEMERLST
GMSDAGGVSQHLTKYELGRIEHAIEETLQQMVSNQENNWMPENDGKPDEL
IELEEKYTQEFLSNDADIEGGFKSEELAGLERELVKLFSEQSVKEPVADG
LGAEKSEELYHQAVKKFDAEFKGEYLGWKTFQIKGHSPERPELNRAELNS
IKDDLGAIYEELPGELQSIANELQLLQQSLVQMADCSQAVLGKQQDTDEA
TKTRHSVKQLNDVIAAMKSAVTGLTQAKEMLISAENWTVETAEKNNPMAG
KLLETIKEIKSAAKVAEARAYEVLSLPGPSGLDYLNKKEDMQELQNHFGK
STPHILIANGVATAIDSLDGIVGQLKEIANYGSLLDKIAGKIKAEEKRDY
DNVAVVRALNGSLLSTDWKAVKEKLQIGKDDPFFKLVARGGSQVGEKIKN
KFTRGMDVLRFALSDPERAPKPKNHYYKAPNRVDEFFQPVIDAMRVFAGG
EKMHAKSPLPALNIPRAPQEKQGDALIRMLRGEFLPGVAKPVFSAAALEI
QSTTEKLTRVTSELKEVVEQAGKNKNYPSDMYRDVCEKAREFAQEVGQTL
KERVQERISHLPEPKNTQQNVTTHEFKESLTSAAEMLSRTAVELEKAALS
DNKKDQLKALEVISSNAKIIKNKIKDTVKSATGEKLHNFDVDGRLGKAVG
MWASEQVEQYSKAHPEVPDEIIERAMDHVFNENLKQSFGRTNDPNAVLLR
NRVVQAINDIADGKLSLPDKIEKELNRTDTFDKYLQEWGLKKVASGGVSG
VIAASVDLGFGTVDGLVNHILNRIMSTEGRKNLDIPRPAWLKAAIAPISI
TLGIRALQNSAMPNQGQPVEAIKSYLKREVPKAVFRLVTSFLPRGVNLAM
AAPLAIWAVADKDRIEHLKKLATKFPLEAAFSTAYVAAVACQEWDSISAP
QARAYQGKDDAVEKQVSQSADIVRRGRGGPDGMRPSEERVIDSALSEALE
QLEQEKNKLNNLTPKQRDLIRKMGRTPEGLRDQCEDQIKRIRSYMKGGEN
DDQLVILGPAEKGQPNFDACVKRDDSHQRIFIREGANDLTRVLRHELVHL
VGTEEQETRNLMALLDNLRTGRPVSLDEDKEIRDTSSGLSFASLPSHHTQ
RREPELLDLIKEYDEAHPIVNGRREVTKDQARDFYTQLASGLKRSTNMTE
QEIRVVDDIYGRAYPHEMNITKLSWNALSEILKTKGVNSITPDTIVDIKI
KTITADGTFGPEQPMKVKLLDLARGAYVHDIGDGHVSVVTDLPRSIKSLF
HTTPYIGRQTFPITSMLHESVQRKLSDMEQNESVVFREQIWKGTIKNTLR
RIGEEKNIKELKDAADSKIKTGYFTLNNSRDPVFALSKAGGPGKENDPVK
VVGIVAIPKGRGKQILVNILTGKTLEVEPNKDYGPRNSASDASIKKDAED
LKAFLLPNFNLNKNKFFTETDKDAYAFSATRYEGALSQQALMMGQTEAPT
FYGPKFKIDLVDSLDQLAEQFSAIEISDAKNNVDFLFSTEGEVWVKHLTA
AGKRLVNGMAMATLPFFRLESVAFLNIGLTLLSHSLSELEISIEDDDTKR
AQLKTDLALDIVLSLPGDAGDVLDVINHFKKMKEALKPMGGVLGGGKTSW
HNTRPPLGVEGNPPIPANIGRENYNQPLNIRRPQQNEHGQWAGQKGTLQM
LDPTEGVSGVDLNSVKIERDGLNQGTYLKGGKTYIKQDDVVYEVVRDDSH
STWRIRKPDGGDGTPVHYDADTGSWNPGDTVPPRVVNSGNRAGGLGQVAV
PRKAPQELDSVITDLKGNALLKTYMDNPADRCRDVTKIAYGSAKAQGKDP
EIVQLLSWNAAMDSPENHFVIRVKVNDEFYIIDPSITQFNKLKEQLGSEI
GAGVEMVDGKMFVGPESEWKKLMLSNYETRLLKMQVTKNDDLLTNPTKAA
GGPSTVVGEVINQPRWVDEMMSTQKSAQIYKSELRTSPSTIGDTALREKI
DSWKPEKFDFLLKPKLDNVNALGLRNKARLESVLGLNRTLLSKPPHSQDL
SRLVDMQNALGGEAFLRKSPEAKMDDYKRLAAAIHAELISKTESGAFKHS
LETREKLAVWWVEVKTSERTFGYKLNNFTDPYKSAQVVEGSMGLRPSVSG
VVNGKAGRIEYDLNEQGLYERRAQVFERVENRQGAEVRLTTSMTNGAVVN
NQVMDALNKNPNGKVYILTGTHGSPDGVRDRELNAEMRFTMEDTQNLPPA
VRDRVVVVDLAHATDEYVQNILINAQKGDTIIGGFCFSRNDGVIAGALGL
EIKPSHIPKYPEQSRAWLSNVPTNQYGPTWGTTVRPGGAGSTPVTASTLP
AGMADEYFEMQGTVNLDSGKRYVFQIGDTGGRNWTLFDDYAKSSMAKHGI
PQENVFGELSATRPTSILNPPKSDTLSHLTLNDRLDIPVHGSITGPSDPG
AQGVGLPQHFSPKQLAEKLQSYGLKEVGVLRLDSCNVGDGDYLVRLKKEL
DLLNIKVGYLSAPNGYLQATHLPFLHIRPVWQTKFWSPWNVVEGNVKVDF
KGTKYSANPSGRINENASIGAMKAKIDFGTLNHSEKVGYLTQRAMDATAG
QALIAAHGRIGAWKIIRACVLNNLSKDQSAESMGEEAIMNGVLSSLNEID
KPASAMVPGGEYLSKPGDSFYTVREEFRKAYPNASGSDLSQFLYLNSNIF
RRYVNNEVPVGTVFKIPPLTQQPQSSQGTISSIPVIQHTDQVEISGKPTS
TMVSGGTYQSRSGDTFYTVKDEFIRKYPTATSQDVVKFSWLNTHISRNGE
LPVGTVFQIPLIGSSENLSIEKSTAMVSGGTYQSLSGDTFYKVKDKFINT
FPNVTAAEVEQFILLNISISRDDELPEGTVFKIPSLKSQPQPRS
>CV1248 probable transposase
MPQARLLGSQLLPLAQQIRRNECLGGQASQGAGDRECAPEKTLGRDHARE
RDCQRSPEKKVVSAPSRRELVRHLVGKGLSERKSLRLAGMSPSSFRYQPA
TDRNAVLKAKIIALAQRHRRYGAGMIYLKLRQSGMVVNHKRVDRLYAEAG
LQIRRRKRKKIPVADRHPLARPLAANQVWSMDFVFDRTAEGRVIKNLTVV
DDATHEAVAIVPERAMGGLHLTRVLDQLAQTRGLPKAIRTDNGKEFCSRA
MLTWAHARGVQLFLIEPGKPNQNAYIESFNGRFRDECLNEHWFTSLRHAQ
VVIEAWRREYNNERPKKALGGLTPAAYAESLAEKSGQLSPDSKALCY
>CV0005 probable DNA methyltransferase
MVPQVASHASFTDGELRNAAFYADDNVLIFNMDVREAMGHLARAGVIVNC
MVTSPPFYGQRDYGVDGQIGLEEHPRDFIANLVGCFEASRPVLAENGSLW
VNLGDTYWSGKGEHKSGEGKQSARRFGLRPQDRTGDGELCKPKQLLLIPH
RFAIAMQDHDWLVRNDNVWVKPNPIPDQVRDRCSMSHEYVFHLVKSRWYY
FNKDAVGRKSASGSVLPPPDTWEVAPARSSHQHKARFSEELVRIPILATT
PPGGVVLDPFGGSGTSLVFARKHGFRAIGIDLKAEFCELMVEQLRSLE
>CV2905 probable NAD diphosphatase
MPFELPQQPAPELPERWCVFNGSLLWLQDNQLPAQPPAGCALTGQRFLGI
HEGSNLFLADLVGDMPAQAGEWLPLRPALLAMPMAQVQAAARAAQLRQFF
HSHRFCGHCATPLAVSADQLGRHCPSCGQVYYPRISPAMMVLVRRGRELL
LARSPHFAPGMYSALAGFVEPGETLEECVHRETWEEVGVKVKNLRYAFSQ
SWPFPHSLMLAFIAEYDGGDIRPQEGEIEDAGWFDIDALPGLPMPISIAH
RLIRHACDRIRDLEA
>CV2556 probable transposase
MAQQIRRNECLGGQASQGAGDRECAPEKTLGRDHARERDCQRSPEKKVVS
APSRRELVRHLVGKGLSERKSLRLAGMSPSSFRYQPATDRNAVLKAKIIA
LAQRHRRYGAGMIYLKLRQSGMVVNHKRVDRLYAEAGLQIRRRKRKKIPV
ADRHPLARPLAANQVWSMDFVFDRTAEGRVIKNLTVVDDATHEAVAIVPE
RAMGGLHLTRVLDQLAQTRGLPKAIRTDNGKEFCSRAMLTWAHARGVQLF
LIEPGKPNQNAYIESFNGRFRDECLNEHWFTSLRHAQVVIEAWRREYNNE
RPKKALGGLTPAAYAESLAEKSGQLSPDSKALCY
>CV2946 probable DNA polymerase III
MLARLRRRWLLARLRDPAWAGLLDEHPGEVVSLDCETTSLNVSEAELLSV
GAVKLRGDRILHSEALYLLVKPDSVPSAGNIAVHGLRRRDLAEGLPAREA
VSRLLAFIGGRPLLGYYLEYDVAVLNKYVKPWLGIGLPQRQIELSARYYD
YRFRQRPDSHIDLSLDALHRELGVPALPRHDALNDALSAAMLYQALRRRG
FG
>CV3614 conserved hypothetical protein
MDQLVLDLTPTPLPAFDNFLAERNREVITALTATEGERFIYLWGEPGCGK
THLLQAWIAHAERLGRAAIYLDGKGDHLPDFAREASFIAVDHVDDLAPDD
QIMLFSFYNSLKEGGEGRLLMAGRKPPVALSVRDDLRTRLGWGLVLEVKA
LSDDDKLAALRSHAANRQLSIPDDVYRYLLTHWRRDLTSLISMIDMLDRY
SLALRRPITVPLVKNVLQTATPES
>CV0088 probable methylated-DNA-[protein]-cysteine S-methyltransferase
MPPEFARRVLALLAEVPPGRVTTYGTLAELAGYPRHSRHVGHLLGNLPEG
VTAPWHRVLGAGGRPSRPGSHHADWQRLLLEEEGVEFNASGKVDLRIFGW
PGQMV
>CV0391 ADA, methylated-DNA-[protein]-cysteineS-methyltransfe rase
MRVTDPRQIDTFYRALLERAADHVGIFYVGVKTTGVFCIATCRARKPKRE
NVVFYTDLKDALDAGYRPCKVCRPSENAHTAPSDVAAAIAWLRQHPKARL
SDDGLRLLGCRPERVRRWFQQHYGMSFHAFQRSVRINMALEELKGGRCAT
DAALDCGYDSLSGFGYTCKKLTGCAPTAAAQIIRIHRFTTPLGPMFVCAS
ERGVCLMAFVDRKTLETEFHDLQRLLQARILAGENQHTRQAERQVGEYFA
GTRFQFNLALDMPGSEFQKSVWQALQTIPYGEIASYADQAESLGRPEAVR
AVARAHGANRVAIVVPCHRVLGTDGSLTGYGGGLARKQWLLAHERRHALP
RS
>CV3195 alkA, DNA-3-methyladenine glycosidase II
MSVIDCDIALPAGFRPQDILAFHRRDGERLAEQVDDDGLRKGLLWQGLPA
CLDLRFRPGWAVLRLDVDGGAAEARALEDIGRRMLGLNQPVEAFERRYRD
HPQLGGLIAARAGLRVPQTATPFEALAWAITGQQISVAAAVTIRRRLLQL
CDCRHSSGLLCHPDAPRLAALTADQLGEAGFSRAKSRALLALSQGAASGA
LPLDGWLDGAPAEEIAERLLAVPGIGPWTVSYALLRGYGWLDGSLHGDVA
VRKALGMALGMADKPDQKQAQQWLDAFSPWRALVAAHLWASLQAGGF
>CV3196 alkB, alkylated DNA repair protein, AlkB protein
MSDSLFAPDDGPWTERLSAGAALLHGWACAGDAELVAAVEAVVAQSPLRG
MVTPGGQAMSVTTASCGDWGWVSDRRGYRYSAVDPDKGRPWPAMPGPLRE
LARGAAAEAGFAGFDPDACLINCYLPGARMGLHQDKDERDFSAPIVSVSL
GLPAIFLLGGLSRADKTARILLQHGDVLVWGGPDRLRFHGVLPVQPGIHP
LLGGRRLNLTFRKAF
>CV0164 alkD, DNA alkylation repair enzyme
MDRIDALRAQLTAAADPARAPAMRAYMRGQFDFLGVAAPARRKAAVAWIK
SHDTAGPDVWLTLAERLWQEPEREFQYVALDLLARHAAELPAAILPRLLA
LVTAKSWWDTVDGLAAWVIGGLVRGRRELQTEMDTLAGDSDFWLRRVAIL
HQLYWKRDTDAGRLFRYCSANAADPEFFIRKAIGWALREYAYTDAEAVRG
FVASAALSPLSRREALKRIQQNPLPAKEA
>CV2853 dbpA, ATP-dependent RNA helicase dbpA
MKPAAFSTLPLPAPLLSNLDSLGYHQMTAIQAASLPAILEGRDLIAQAKT
GSGKTAAFGLGLLSSINPRWFGVQALVMCPTRELADQVAQEIRRLARAID
NIKVVTLTGGTPMGPQIGSLEHGAHIVVGTPGRLQDHLFRETLNLTGVKT
LVLDEADRMIDMGFIEEIVGIVRACPRTRQTLLFSATYPEDIRKASAQFL
KNPVEVKVESLHKADHIEQWFYKVKPETRLETVSRILRHLRPTSALAFCN
TRERCKELVRELQEQGFHALTLHGDLEQRERDQILLRFANKSATVLVATD
VAARGLDIKELDVVINVDVTHDPEVHIHRIGRTGRGEQHGLALTLATDSE
AKRLVQIENYQQAELTWADVEELTPAPGGPLLPPMVTLEIAGGKREKLRP
GDLLGALTGEAGFAGSQIGKINIFEFNSFVALDRAIAEDALAKLSRGKIK
GKQFKMRLVG
>CV1991 dinG, ATP-dependent DNA helicase
MLTDAEKDSIRDHYRAISDRLPGFRPRAAQRRMLAEIANALSRAQEKVGD
DWPEREGESIAVIEGPTGVGKSLAYLLAGGVMARSRGKKLVVTSATVALQ
EQLVNRDLPFVVENSGLPLTFALAKGRGRYLCPYRLYGLTAQHAQQSLLQ
PDPMMALWDHKPEQAELDALSAMADAFHYRKWNGDRDSWDSVVEDGLWAR
VTNDRHGCLKTACPNRVECPFYLARDTLENVDVVVANHDLMLADVSMGGG
VILPAPEESFYCIDEAHHLAKKAVNQFAAEHSLGQALGWLDKVGAVVVHA
EAHTGKAELASSAIDSAAACVETLTEWQWLLGSEEALAASSDNLEPSWLI
EDGILPERLKASAANMAISARALSKQLDDMGNALSEARKDKSGDVDLDKT
ATELGFLIGRAEQLMAVWDLFDTETPENAPPIAKWITRRAEGKGDYLFSA
SPVSAAASLAATLWRRAAGAILTSATLRSLGDFELLLSQTGLKWLPKVSC
MALESPFNFDEQGELYLPPLLASPKDPGGHTREIVEWLPKLIDLKEPVGT
LVLFSSRKQMQEVGAGLPAELRDRLLIQGDIPKRTLLDTHHQRLKDQQAS
VIFGLDSFSEGLDLPGESCVHVIIAKLPFAMPDDPVGKTLSRWIEKRGGN
PFIELTVPEASIKLVQAVGRLIRTERDYGRVTILDNRLTRQSYGKKLLAS
LPPFKRI
>CV4363 dinP, DNA-damage-inducible protein P
MRYAVVLYPCSSFHHESVRPSRFPAPRRHPLLHRLPLAVARRLAGPGTAD
HFRERAGRGGAASRQRRRVPRRGRRRAAVGPQGGRRLSRAENPQAAAARP
HRAGQGAGAQRPSLSAAMNAPQRKIIHVDCDCFYAAIEMRDDPSLRDVPL
AVGGRPETRGVVATCNYIARRYGVHSAMSSARALRLCPELLIVPPDMARY
RLASQQIMAIYQRYTEVIEPLSLDEAYLDVTGQPHERGSATLMAEAIRRQ
IRDEVGITASAGIAPNKFLAKVASDWNKPDGQYLIRPRDIDAFVAVLPVE
KIHGVGRVTAERLHRLGIRSCGDLRRWSPADLFRHFGSFGERLLALAHGR
DERPVSTDRSRKTISVEETYAQDLPDLASCLSKLPELVDRLQARLARSGS
PAFKGLSVKLKFDDFSQTTVEQPGYALSMAAFGQLLRAGHARGARPARLL
GVGVKLADDFDLPRQLRLFGRDGRPLPDSAPPAEAPPGGPEADSAA
>CV0001 dnaA, chromosomal replication iniciator protein DnaA
MTELDQFWPACLARLEAELSSQQFNTWIKPLTAEAGDEGIALFAPNRFIM
QFIKDRFLPRIEELAVELVGELPVELRLGAPTARPAAPVAGNSQPKAKEP
AKAAASAPAAPSPAKQAAVKAIGGSHESTRLNPSFTFDTLVTGKGNQLAR
AAAMQIAENPGDQAYNPLFVYGGVGLGKTHLIQAIGNHVFQKNPQAKIRY
IHAERYVADIMRAYQHKAFDEFKRYYHSLDLLLIDDIQFFAGKNRTQEEF
FYAFNALIEGGKQVIMTCDSYPKQIEGMEERLISRFSWGLTVEIQPPELE
MRVAILMKKAEADSIKLEHNVAFFIAQNVRSNVRELEGALKRVVAYARFT
SQNITLELVKEALKDILAAGNRQVTVDAIQKTVAEYYKIKLSDMHSKKRS
RDIARPRQVAMALAKELTQLSLPNIGDAFGGRDHTTVLHACKTITEMRAS
DADIAHDYEALLSMLRN
>CV2502 dnaB, replicative DNA helicase
MTEQYENFDSEMAAIRTPPHSVEAEQSVLGGLLLDNSAWDKIADVVSEAD
FYRHDHRLVYKQIAKLVEMARPADVVTVAEALDKNAELAEIGGLAYLATL
AQNTPSAANIRRYAEIVRERSVMRQLAQVGTEIAEAAYAPMGRDAAQLLD
EAEGRVFQIAESTAKSKQGFLEMPGLLKEVVERIDMLYSRDNPDEVTGVP
TGFIDLDAKTSGLQPGDLIIVAGRPSMGKTAFSMNIAEHVAVETHLPVAV
FSMEMGGAQLVMRMLGSVGRLDQHVLRTGKLGDDDWQKLTYAIGKLSDAP
MYIDETPALTALELRARARRLARQHGGKLGLIVIDYLQLMSGSGRGDNRT
AELGEISRGLKGLAKELQVPVIALSQLSRAVEQRPNKRPMMSDLRESGAI
EQDADLIIFMYRDEYYNPDSPDKGLAEAIIGKHRNGPTGAVRLAFIGHYA
KFDNAASVGAAGWADSDS
>CV0911 dnaE, DNA-directed DNA polymerase III, alpha subunit
MNAPRFVHLRLHSEFSITDGIVRLDDAVKRAAKEQMPALGVSDLMNLFGM
VKFYKSCRNKGIKPIVSADIWLENEEDRDKPYRLMLTAKNREGYRRLCEL
LTEAFSHNQYRGRAEIKRAWLASGDNSNLLCLSGAHLGDVGIALSMGQRD
EARRRAEYWESLFPGAFYLEIQRVDSAQVENVVQATLWLAGETGLPVVAT
HPIQFMEKEDFKAHEARVCIAEGYTLGDKRRPRSFSECQYFLSAEQMVER
FADIPEALANTVEIAKRCNISVVLGKNYLPLFPTPDGMSLDDFLVHEAKR
GLEERLKQLYPDEAERQEKRPDYDARLKFECDTIIQMGFPGYFLIVADFI
QWGKANGCPVGPGRGSGAGSLVAYSLSITDLDPLKYALLFERFLNPERVS
MPDFDVDFCQENRWRVIEYTRRKYGEEAVSQIATFGTMSSKSVIRDVGRV
LDLPFGLCDRLSKLIPLEANKPLSLEKAMQVEPQIGEIIESEGAQELIEL
AMTLEDLTRGIGMHAGGVLIAPGRLTDFCPLYIASGDGASPVSQFDKDDV
EQIGLVKFDFLGLRNLTIIELAQKYIKDLTGEDVDVAHLPLDDKPAYKVF
ATANTTAVFQFESTGMKKMLVEAKPSKFEEIIAFVALYRPGPMDLIPDFI
QRMHGAKFEYLHPLLEPVLAPTYGIMVYQEQVMQSAQVIGGYSLGGADLL
RRAMGKKKVEEMVAQRAMFVQGAAKQDIPEAKANEIFDYMEKFAGYGFNK
SHAAAYALVAYHTAWLKAHHCAAYMAATMSTELDNTDQLKVFYDDCQDPK
NGVTFLPPDVNHGFYRFVPVSRKEIRYALGAIKGTGESAVNHIVEVREAG
GPFTDLFDFCKRTDKKLVNKRVIEALIRAGAFDAIEPNRALLFANVGLAM
EAAEQAHANANQGGLFDMFGDDVAPAVEMAATRPWSDAVKLAEEKLAIGF
YLSDHPFSAYEKEVRGFIKTTLSRLTPRKEPQLLAGFVTGIRVKVGNRGK
MAFVQLDDGTAKLEVSLFAESFELNRDKLKEDVVLVVEGKVSEDSFSGGL
RIVVDKLYSLGEARSRYARGLALQLPAKPDIARLKSELHPFKSQDAGCLV
RLAYNNGKAKGELMLPQEWGVRLDDGLLLSLADWLGEGKVKVLW
>CV3763 dnaG, DNA primase
MIPQDFIDQLLSRVDIVDVVDRYVPLKKGGQNYMACCPFHKEKSPSFTVS
PSKQFYHCFGCGAHGSAIGFVMEYQGIGFVDAVKMLAEGIGMQVPNERSV
NPEASRKAREKQVSLEQLMQLASDFYRRELKGAANAVAYCKGRGLSGEIA
ARFGLGYAPDGWQNLEAAVDNYQDDKLVEAGLVIVAEDSGRRYDRFRDRL
MFPIRNQRGAIVGFGGRVLGKGEPKYLNSPETPLFEKGRELYGLYEGRQA
IREKNRVLVVEGYMDVVALAQYGIGYAVATLGTATTGEHVRKLLKHAEQV
YFCFDGDAAGQKAAWRALENSLPQLVDGKALNFLFLPTEHDPDSYVREFG
ADAFEELLTQQSLPLSVYFTRELCRGINLGTPEGKADLIRQATPLLAQIA
APALGYMIRKRLAEMAGVDVDELDMLTGGKPQRSERGGRSGGRRDYKVPA
ESQRVVNTTMVKKLIKWLLMNPQWASDVKLPDSLALSDELGCFAMLAERV
LEHGDAPNTAQLIEGLRGTPYEGLIDGVLQQAMQDPDEFADPSDDDRQLF
QDGNDRLLKMLHAEQLERLKLKDRHEGLTPEEKALMGQLLREMFSPPN
>CV0002 dnaN, DNA-directed DNA polymerase, beta subunit
MLILQAERDALLKPLLAVTGIVERRHTLPILSNVLIEKKGGQVGFLATDL
EIQITTASSDELPGEDFRLTTSAKKLQDILRAIPGNATVTLEQLDGGRLV
LKAGKSRFNLQTLPAEDFPLLSVGSAGESSFTLSQRELKRLISQVQYAMA
VQDIRYYLNGLLMQTDGNQVRLVATDGHRLAFASADVAATLPKAEVILPR
KTIIELYKLLQDSDDEIKIEVLANQVRFSFGATVIISKVVDGKFPDYNRV
IPLDNDKIFLIERLEFLHALQRAAILANEKFRGVRLVLAPGKMSILCTNS
EQEEAEEELEIAFQGGTLEIGFNINYLLDVLTNLPADTLQLAFGDSSRSA
LFTIPDVSNFKYIVMPMRI
>CV1257 dnaQ, DNA-directed DNA polymerase, epsilon chain
MRQIILDTETTGLDPQQGHRIIEFAGLEMVGRKLTGKHLHLYIHPEREID
PEAQRVHGISLEFLAGKPVFAKVAHEIADFLRDAELIIHNAPFDVGFLNA
EFAKAGIEPVGKLCASVIDTLAEARDMFPGKRNSLDALCDRFEIDRSNRT
LHGALVDCELLSEVYLWMTRGQESLAMDIEVELPGGDAGAIQFERKPLKV
LAASEAEEAEHQAYLDVLDKAVKGICVWRGLASPAQAEG
>CV1610 dnaX, DNA polymerase subunits gamma and tau
MSYQVLARKWRPKRFADLVGQEHVVRALSNALKEQRLHHAYLLTGTRGVG
KTTIARILAKSLNCETGTTAEPCGECQACRQIDSGRFVDLLEIDAASNTG
IDNIREVLENAQYAPTMGRFKVYIIDEVHMLSKSAFNAMLKTLEEPPGHV
KFILATTDPQKVPVTVLSRCLQFSLRNMTPQQVSSHLAHMLDIEGIHYEA
PALALLGRAASGSMRDAQSLLDQAIAYGLGEVKEDGVRAMLGAVDRRYLF
TLLQALAASDGPALMAEADRLAERGVSFDSALSELAVLLQQLALAQTVPA
ALAADEPERDTLFALADAIAPQDVQLYYQIAIHGRKDLALAPDEHAGFNM
TLLRMLAFHPANAPAQTAAPARPAAAVQPRPVAASAAAVASVSVPAERGM
SPAARALQAAGLGAQAQGKPRAAEPSPAAEPEPEPAPLPSAVVSAVSEPS
KPAPSPQPAPALAAPVSEPAAQDDEDERDEEEIVEAPWSDDDAMPAYMQQ
PPLEDEPSSYSFDGDWQRLVADLGAKLGAARMLAHNAVLKRWSQDRLELA
VPESFRHMSGRDYQEKLKAALAERFGHPVDLAVTVEELGMETPAMTDARL
RQEQLAVARECMQNDPVVQQMVREFGATLLIETIQPVQE
>CV1988 endA, deoxyribonuclease I
MVSGGKAVGHRDFPGAKRILPRVYSGMEVDFYCGCRYQGKAVDWTSCGYQ
PRKSETRASRIEWEHVVPAWVLGHQRQCWQQGGRKACGDQDPLFQMAEGD
LNNLVPAVGEVNGDRANFAYGAWEIHPRPIYGQCRSLVDFKLKRFQPREE
VRGAAARITLYMHQRYGLRMSQQDRQLMCAWARQYPVDEWERQRNKRIVQ
WQGEGNFLVSQPEELSRVCG
>CV4247 exoA, exodeoxyribonuclease III
MLRIVSANLNGIRSADKKGFFDWLAGIDADFVCVQELKAQAGDLSERMRN
PDGLAGYFHYAEKKGYSGVGLYTRHQPDAVVEGLGVDWIDAEGRFLQLDF
GKLSVVSLYLPSGSSSDERQQVKFDFLDVFMPHLEKLRAEGRDIVICGDW
NIAHNEIDLKNWKGNLKNSGFLPEERAWMTDLLGRVGWRDVWRNLYPEAP
GYTWWSNRGQAYAKDVGWRIDYQIVTPSLMELAESASVYKDEKFSDHAPL
IVDYRRSL
>CV0545 fis, DNA-binding protein Fis
MQNNDHISQSVRLAMEQYFRDLDGEAPSAIYDMVLACVEKPLLEVVLIHT
QGNQTRAAELLGLNRNTLRKKMKSYDLI
>CV2298 gyrA, DNA gyrase, subunit A
MTDNLFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRV
LYAMHELSNDWNRAYKKSARIVGDVIGKYHPHGDTAVYDTIVRLAQDFSL
RYPLVDGQGNFGSVDGDNAAAMRYTEIRMARIAHELLADIEKETVDFGPN
YDGSEHEPLILPAKIPNLLVNGSSGIAVGMATNIPPHNLNEVVDACLALL
ANSDLTIDELIDIIPAPDFPTAGIIYGTAGVKEGYRTGRGRVIMRARTHT
EPIGKGDREAIIVDEIPYQVNKARLLERISELVRDKQIEGISDLRDESDK
SGMRVVIELKRGEMPEVVLNHLFKMTQLQDSFGMNMVALVDGQPRLLNLK
QILEEFLRHRREVVTRRTIFELKKARERGHILEGLAVALSNVDEIIALIK
ASEAPPQAKAALMARAWRSSLVEDMLSRVEGDKARPENIDPAFGMKEDGY
HLSDTQAQAILDMRLQRLTGLEQDKIVGEYREIMDVILDLLDILAKPERI
SQIIGEELTAIRAQFGDPRRSEIEPYGGDINIEDLITPQDMVVTISHTGY
IKAQPIDDYSSQRRGGRGKQAAATKDDDFIETLFVANTHDYVLCFSSRGR
CYWRKVYDLPQGGRQSRGKPMVNVLPLEEGEKINALLPVKEFRDDQFVFM
CTANGTVKKTPLVDFSRPRTAGIIAVNLDDGDNLIGVALTHGDDQIMLFS
DAGKAVRFSETDVRPMGRNATGVRGMMLGDDHQVISLLVSNSEQQMVLTA
SDGGYGKRTCVGDFRRTSRGTQGVIAMDLTDKTGLKLVAASLVEETDDIM
LITTGGVLIRTKVAEVRETGRSAQGVRLINLDEGEKLIGLEIVAESEAEC
AEGETEGGDAPEQGEA
>CV0003 gyrB, DNA gyrase subunit B
MYIGDTQDGTGLHHMVFEVLDNAIDEALAGHADTIKVTINPDNSVSVEDN
GRGIPTDIHPEEGRSAAEVIMTILHAGGKFDSNSYKISGGLHGVGVSVVN
ALSDWLKLKIWRDGKVHEMEFRRGDAVAPLTVTGHTSHRGTEVTFFASVE
TFGHIEYHFDILAKRIRELSFLNQGVGIQLIDKRSGKEENFAFSGGVAGF
VEYMNRNKTVLHPKVFYGIGEKDGMSVEVAMQWNDSYQESVQCFTNNIPQ
RDGGTHMTALRQVMTRTLNQFIEESEAAKKAKVDTTGDDMREGLTCVLSV
KLPDPKFSSQTKDKLVSSEIGPVVNEVISEALKTYLLENPNDAKIICGKI
VEAARAREAARKAREITRRKGVMDGLGLPGKLADCQEKDPSLCELYLVEG
DSAGGSAKQGRDRKFQAILPLKGKILNVERARFDKMLQSQEVATLITAMG
CGIGKDEYNPDKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMTELVERG
HIYIAQPPLYKAKHGKQERYLKDDGELNQYLLQLALEKAELIPAEGEAPL
SGETLGEIARQFLLARAVMERESRVIDPLVLEAMLKTGPLSLESQQQADA
TVAELNKHLSADTIELQLLRDEKNDGHLVKIIRKLHGNVLVTVLDQNFLD
SGDYAELKKTGSLLGGLLRQGAHVKRGETVKPVAEFGEALDWLLAEVKKG
MNIQRYKGLGEMNPEQLWETTMDPTVRRLLKVRIEDVMGADDVFTTLMGD
EVEPRRQFIEGNALIARNIDV
>CV3045 himD, integration host factor beta-subunit
MTKSELIARLSERLAERNSQLVYKDAELAVKTILDAMANNLAQGSRIEIR
GFGSFDLNYRPPRVGRNPKSGASVSVPEKYVPHFKAGKELRERVDLSLLE
QTQA
>CV0507 holA, DNA-directed DNA polymerase, delta subunit
MVHGEEALLALEAADAVRAAARAAGYLEREVLTVESGFDWSQLTDSMSSV
SLFASLKLLEIRIPGGKPGTEGVEALQRLAADPPQDTVTLITLPKLDKAQ
QQSKWFTALDKIAQVVEARPVGRAELPGWISRRLKAQGQQLGADALAFFV
DRVEGNLLAARQEVDKLALLYPKGELSLADLQAAVANVARFDVFQLSEAW
LAGDTPRLTRMLDGLMAEGEAPVLVLWSLAEDVRMLLKLRQGLKDGRQPR
DMARELRLWGEKQKLAEPALRRIGPRKLMAALSECARIDRQIKGVEPGEP
WQTMRALATQLAA
>CV3722 holB, DNA-directed DNA polymerase III, delta subunit
MLYPWQSADWTRLSAERERMPGAWLFTGAAGIGKLAFAEHLAQSLLCESP
AAGHQPCGQCQGCRWFHSGTHPDFRRLSPFADEEEEGKEAKTTRKLPQIK
IEAVREVIDFAHLTAHRAGRRVILVEPAESLNLAAANALLKILEEPPEAV
LFLLVSHAPQRLLPTIRSRCRQFALTRPAESAALAWLKEQGVANAEAELA
HNGGAPLFDHDPELAALRGQFVRGLGQPSFAGMLQLAELIDKNKQLSLLQ
PLSWLQKWLHDLAALCLAGRVRYYPDHERALAALAPRCDAVQLMACQQAL
TALAPFSQHTLNARLQLEAVLMDYLKIFAGGKAG
>CV2913 holC, DNA polymerase III, chi subunit
MSRIDFYTNVADPQAFACRLADTVQRKKERLLIWLDSERSVEVFSNRLWS
FGDTRFVPHCRLGAPEAAETPVWLAASLPDDLSHPVLLNLGPQLPFEFGR
FERILEIVGRDPESLATARERFRAYREHGCEIEHHDMSQTP
>CV1516 hrpA, ATP-dependent helicase hrpA
MTTAPLLAELKAALTSCLIRDRHILRRKLADAAERQKRQQPVDKLLSDIA
SQVERSRGRADARRAHLPKPSFDDALPVNQKLDDIKSAIDKNQVVIICGE
TGSGKTTQIPKICLELGRGVFGLIGHTQPRRLAARSVATRIAQELGSQLG
EHVGFKVRFTDKLSEKSVIKLMTDGIMLAETQTDRYLEAYDTIIIDEAHE
RSLNIDFLLGYLKQLLPRRPDLKVIITSATIDADRFARHFDGAPVIEVSG
RTFPVEVRYRPLKQRDEDEREMEMEDAIVDAADELSRQGPGDMLVFLPGE
REIRETAEKLRKSGIRGYEILPLFARLSNEDQQKIFKPSGGRRIVLATNV
AETSLTVPGIKYVIDTGLARINRYSPRAKVEQLQVEKISQAAARQRAGRC
GRVESGICVRLYAEDDFNARPAFTDPEIVRSNLAAVILRMAALRLGKVDA
FPFLEAPSSRLIADGYQVLTELAAVDDKGELTAVGKELARIPVDPKVGRL
MLAGRDYHCAREVLIIAAALSIQDPRERPFEARDAAEKAQARFNDEKSDF
LSFLHLWDFFADALKHKKSNRQLVSACHDHFLSYLRMREWRELHAQLAEI
ASELGLITRDEAHADAEQPDAQMTQKKRQQVDAVAYENLHKALITGLIGN
IGMKNQEGDDYQGARGVAFHVFPGSGLKKTKPKWLVAAELVETTRLYARC
VAKIEPEWVEKLAPHLVKYHYFEPHWEKSRGEVVASERVTLYGLTLIPRR
AVSYGRIAPEEARELFIRGALVNMEYVSNAPFFQRNQQLIREVEQLEHKA
RRQDVLVDEEALYAFYSERIPAGVVDAASFEAWRKEAEKSEPKLLHLTRE
ELMRHAAQHVTENQFPEWLELEDGKLKLRYRFEPKHPLDGVTLDVPLAIL
NRLQPAPFEWLVPGMIRDKLQQLIKGLPKQIRRCCVPVPDFVTRFLLSNP
DQQQPIAPQLARFILRETGGVKVDIDEFNTQELPEHMLFNFRVIDDGKQE
IGMGRDLIALQKQFGQAAQLTFRDTSAEFERDDVKTWDFGELPESIQFAR
GRQQLTGYPALTLEEDRVAIRLFDTQQVAERHHRQGVVKLLQLQLKEQMK
QLGKGLPGMTQIALQLRAVANADDLLADAIAAICDRAFIGEDALPRNEKA
FNDQKNRARTRLPAVIQAVAQYLQQISAEYVPLSQKIQKHKLGHELKQQM
DKLVYKGFLAATPWSQLPHLPRYMKAMSMRMDKQPANPQRDGQRGAEIRE
LWQRWEQRVAEQQEQGDAAPAVLDFRWMLEELRVSLFAQELKTPYPVSVK
RLQKVWSELPR
>CV2554 hupB1, DNA-binding protein hu-beta
MNKSELIDAIAAEADISKAAAAKALDGMVAAVTSALKKGDTVTLVGFGTF
YVGERAERSGRNPKTGATIKIPAARSPKFRAGKALKDAL
>CV2163 hupB2, DNA-binding protein hu-beta
MTKQDLIKHLAAHADVTNKQAESVLNALTTAVLDTVRAGGELAISDLGKF
GTTQRAAKTGRNPKTGETIQIAAKRAPKFSPAKALKDAAA
>CV1354 ihfA, integration host factor alpha-subunit
MTLTKAELADLLFDQVGLNKREAKDMVESFFEEIRLALESGDSVKLSGFG
NFQLRDKPQRPGRNPKTGEEIPITARRVVTFHASQKLKGMVEQYHANKQG
>CV0651 intB, prophage CP4-like integrase
MPLTDTAIRNAKPREDGKPAKLADGGSLFLWVMPNGAKYWRMAYRFDGKQ
KTLAFGVYPTTSLKDAREKREAARKLLAAGTDPNAAKKEQKRERQLTVEN
SFEIVAREWYDKQLPRWTDDHAVRILDSLKADAFPDLGKLPVSQLTAPVI
LDTIRKIEKRGAVETAQRVLQRISAVIRYAIQTGRAVHNPATDLTGAIRA
KKVEHRPALPRGELREFYRRLAAEPLYIPTRIAMHLLMLTFVRPGELRAA
RWEEFDEERAEWRIPAERMKMREPHLVPLSRQALELLKELRPLTGKSALL
FPAVTDLKKPMSENTLGYAMGRMGYKGTATPHGFRALASTVLNEEGFDPD
IIEKQLAHAERNKVRAAYHRAEYLEERRKMMQWWAEFLGRHQKSSID
>CV3903 lig, DNA ligase
MTIPGAGFAGPFAVREFPMTANELRAAELRELLNRYGHEYYVLDAPTVPD
AEYDRLFRELQALEEAHPELAVSDSPTRRVGGAPLDEFVSVVHAVPMLSL
SNAFSDMQLTDPAERHSELIQFDERVRKGLDAAEVEYATEPKFDGLAISL
LYENGVLTRAATRGDGVAGEQVTENVRTIRAIPLKLDGANPPALLEVRGE
VLMLKRDFERLNADQIARGDKTFANPRNAAAGSLRQLDSRITAQRRLSFF
AYSIAQVGGADWPATHAGEMAWLKTLGFPVVMDSLRPVVSGAAGLAGYYE
AVLTARAGLPFEIDGVVYKVNRRDQQEALGFVSRAPRWAIAHKFPAEEAL
TCVEAIEEQVGRTGAITPVARLKPVFVGGVTVTNATLHNEDEVRRKDVRV
GDTVVVRRAGDVIPEVVSVVLAQRPMQPAEGGDLFSAGEEPRYPAYRLPT
ACPVCGSHVVREEGEAIARCSGGLSCRAQRSQAIQHFAGRRMMDIDGLGE
RYIDKLVEYGYVQGVADLYRLKLEDLLEMKRRADEDEGVTPETVKAGKVA
SKWAENLIEAIDASRAPPLARLLFALGIRHVGESTAKTLADWLGTMALIR
RCPAALFAALPDIGGVVADSLADFFAEDNNEKALDALLAEVKPADEHAPS
PKLRERLDDASLLARLAIPRLTEVRSQQLAAQRSLAWLGQSERRALLALE
LPAEVVNALADWLDEPGRRAALASLAGLRDEILASLPAAAEAAALPLEGK
TLVLTGTLPTLSRDQAKALIEAAGGKVSGSVSKKTHYVVAGEEAGGKLAK
AQELGVAILDEAGLQALLAGN
>CV1146 mfd, transcription-repair coupling factor
MDTLTHLPPAGQKTRCGRLPDGLDSHAIAALAKQRRPLLILAADAQAAQR
LKAELPFFAPDLSIALFPDWETLPYDHFSPHGDLVSERLATLWQIRQREC
QVVIAPVSTALGRLAPVSYLLGRTFFLKTGQQLDVEKLRGDMVTAGYQHV
TQVMAPGEFSVRGSLIDLYPMGSPLPYRIDLFDAEIDSLKTFDPDTQRTL
YPVPEVRMLPAREYPADESGVTAFRQRYREKMEGDPSKSRVYKDVSQGLW
PAGIEYYLPLFFDETATLFDYVGDDALVVQHHDVQAAAETFWRDAQSRYD
MARGDVDRPVLAPADIFLRPDELMARLKPYARIEFAGDGETGAALPELAV
DRRAEAPLHKLQRFIASGGKRVLLAAESLGRRETMLAFLAENGIKPTPVD
SWADFAGGKAALALAVAPLYSGFMLADPAIAVVTESELYQHVARSHTRRK
AGRAGSDAMLRDLAEVKAGDPVVHEAHGIGRYVGLVTMDLGEGETELMQL
EYADGATLYVPVSQLQLISRYAGGATDDIQLHKLGNPAWEKAKKRAAEKA
RDTAAELLNLYAQRAAREGHSFTLSHADYAAFAAGFGFEETPDQATAIEA
VIQDMCSGKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLVPTTLL
AEQHFQNFSDRFADWPVRIAELSRFRSGKETKAALAGLADGGVDIVIGTH
KLVQPDVAFKNLGLVIIDEEHRFGVRQKEQLKRLRANVDVLTLTATPIPR
TLSMALEGLRDFSAIATAPSRRLAVKTFVSPLSNGVVREAVLRELKRGGQ
VFFLHNEVDTIENMREKLAELIPEARIGVAHGQLRERELEQVMRDFLQQR
FNLLLCSTIIETGIDIPNANTILINRADKFGLAQLHQLRGRVGRSHHQAY
AYLLTPDGMTRDAQKRLEAIQLSGELGAGFYLAMHDLEIRGAGEVLGEGQ
SGEMQEVGFSLFTEMLKQAVRDLKKGRAPDLDAPLGVTTEINLHSPALLP
DGYCPDVHERLLIYKRLASCETEAEIDDIHEELIDRFGLPPQSVKTLIES
HRLRLVAKELGVQKLDASEVAVQITFIKNPPIDPVKIIMLIQSKKHYRLA
GQDKLRVEQALPEVAQRIVKVKEVLKELSA
>CV1342 mutL, DNA mismatch repair protein
MTRIQRLPDHLVNQIAAGEVVERPASALKEMLENSLDAGATRISVDLAQG
GIKLIRVTDNGAGIAADDLPLALDRHATSKIASLDDLESVSTLGFRGEGL
ASVASVSRLTLTSRPHDADHAHQIIAIDGTLHPVEPAAHPHGTSVEVVDL
YFNTPARRKFLKSENTEYAHCAATFERIALAHPEVEFLLRHNGKVAWRLP
SQSAEDRVAALLGKDFVAAAIPLDSQAGPLALSGFVASPTYSKASRDAQY
FYVNGRFVRDKTAQHALRQAYRDVLHHDRHPAYALFFTLEPSGVDVNVHP
TKIEVRFRESQAVHQFLFHSVHKALAGTSAGAAPTVQVEGAETAAPQLPR
GESAPLFASASPQPASSGAPAPQPFQYQQQSIPLNVAREAVGVYDKLFGG
LREEERALSRPEPAMPSPAAPLLHPAVLAMPAHDENGIPPLGFALAQLHG
VYILSQCAEGLILVDMHAAHERIVYERLKAALESDAIPLQPLLLPVSFAA
DRMEVATAHEHGEEMKRLGVELAPLSPTQIAVRGVPVWLKDGDPVELARA
VLKDVREFGLTQVLTERRNELLATMACHGAVRANRQLTLPEMNALLRDME
ATERSGQCNHGRPTWTRLTMRDLDKLFMRGQ
>CV4062 mutM, DNA-formamidopyrimidine glycosylase
MPELPEVETTRRGVEPHLEGRTLLGAVVRNPSLRWPVPPDLSERVAGEKV
LAVRRRAKYLLLECESGTLLIHLGMSGSLRVMPAGAPPQKHDHLDLLLGE
QVLRFRDPRRFGAVLWHLGPVEMHPLLQALGPEPLSDAFDGAALHQAIRR
RGSPIKLAIMDNHVVVGVGNIYANESLFHAGISPARAACDLSRADCDRLA
AEIKAVLRRAIDAGGSTLRDFVDSEGKPGYFQQTYMVYNRQEEPCRLCGT
PIRQIRQGQRSTYYCPLCQP
>CV3661 mutS, DNA mismatch repair protein
MAAIPTPRLHRGVTHLSRQTKSRARHPMSTPQHTPMMQQYLALKREHADK
LLFYRMGDFYELFYEDAEKASRLLDITLTARGASAGNPIKMAGIPYHAAE
GYLARLVKMGESVAIAEQIGDPALAKGPVERKVVRIVTPGTLTDAALLDD
KRDNLVLAVNMVKGVLGLAWLSLASGEFKIMQASVEDLASELERLKPAEL
VIPDDTGLAAFEGISTPKKKLPPWQFDIESSKLALTRHFGTRDLAGFGAD
TLPVAVGAAGALLEYVKSTQGVNPAHISALSVEDAGELIRMDAATRRNLE
LTETIRGEASPTLASLLDTCATSMGSRLLGHWLHHPMRNHGKLARRHGAV
RALLSRYQDVHAELDQVSDIERITSRVALRSARPRDLSALRDSLTALSGV
KALAASLDSELLNELAGVLPTESPVQKMLAAAILPEPATFLRDGGVINDG
FSPVLDELRAIQTDCGDFLLKLEAREKERTGITTLKVEFNRVHGFYIEVS
KAQSDKVPDDYRRRQTLKNAERYITPELKEFEDKALTAQDRALALEKQLY
EALLDQLAPHIAELKLIAQAVAALDVLSAFAQRAAIGNYAEPQFVPEPKL
DIVAGRHPVVEAEVERFIANDTRLSAERKLLLITGPNMGGKSTYMRQNAL
ITLLAHVGSFVPADSAVIGPIDRIFTRIGASDDLAGGRSTFMVEMTETAN
ILNNASEHSLVLMDEVGRGTSTFDGLALAWAIARALIEKNRAYTLFATHY
FELTTLAGEYPAVANVHLSAVEHKDRIVFLHHVEDGPASQSYGLAVAQLA
GVPAKVIRDARRHLAELENQSAARVQPDLFSAPAPASEPELSPAMDRLQE
IDPDVLSPRQALEILYELKKLAD
>CV1787 mutT, ADPribose diphosphatase
MSSELVYQGGFIKVRKDRVALPDGNESAREYILHPGAVAVLALTPEGELV
LERQYRYPAGREFIEIPAGKIDPDEAPELTARRELLEETGYRAGRWTYLG
TAHPCIGYSNEKISYYLAQDLMLSERQLDAGEFLEVLTLPLDAAMNMALT
GEICDSKSIVGLHWLAAYLGGRMRGVEI
>CV3703 mutY, A/G-specific DNA glycosylase
MHSSFASRLVAWQRRHGRHDLPWQVKDPYRVWLSEIMLQQTQVKSVLDYY
PRFLARFPDVASLAAAPVDDVLAQWSGLGYYSRARNLHKAAKMVMDAFGG
AFPPERERLEQLPGVGRSTAAAISAFAFGRRETILDGNVKRVLARCFGID
GFPGDKAIEKRMWALAEEILPAAAADIGPYVQGLMDLGATVCSRGKPACT
ACPMVDGCVAAREGRTGELPTPRPKKAVPIRHTAMLLARHENKVWLERRP
PTGIWGGLLSLPEFATTLEMEDWLSGRGDGDMLPAWPELEHVFTHFRLII
TPQPVRIDRLHAAGAAEADGQWLDIDQAVDAGVPAPVRRLLLRLASD
>CV3293 nth, endonuclease III
MNAAKRQEIFRRLRDDNPHPTTELEYNTPFELLISVLLSAQATDVGVNKA
TRRLYPVANTPAAMLALGEEGLAEYIKTIGLYKTKARNVIATCRLLLEKH
GGEVPQTREALEALPGVGRKTANVVLNTAFGQPTIAVDTHIFRVSNRTRI
APGKDVREVEDKLERFVPAEFKLDAHHWLILLGRYVCKARKPECHRCAIA
DLCEYPAKPL
>CV2960 ntpA, ATP diphosphatase
MGSKQPVSVLVVIHSRDGRALLMERADKPGYWQSVTGSREGGEDLMDTAR
REVAEETGLDASRFALSDWHIVNRYEIYEHWRHRYPEGVTHNDEHVFGLL
LPEPCEVALAPREHLGYRWLPWHEAAALAFSPSNAEALRMLPEKLGLSG
>CV1423 ogt, methylated-DNA-[protein]-cysteineS-methyltransfe rase
MTTAARHGLIDTRFGPVAAWLDARGALLRLLFNPTPEQLAAHACPRDDAA
LAEVARQLAEYQAGDRQTFDMPLAPQGTPFQQKVWAALREIPYGRTVSYG
ELALALDCPDGARAVGRANATNPIALIVPCHRVLGADGSLTGYAGGLPLK
AALLRFELERSAPPGLFGG
>CV0075 parC, DNA topoisomerase IV subunit A
MSDHDLFDSPAPAGDLTPPPPAAPEAASGDWIPLDLYAERAYLEYAMSVV
KGRALPEVADGQKPVQRRILYAMRDMGLVHGAKPVKSARVVGEILGKYHP
HGDSSAYEALVRMAQDFTLRYPLIDGQGNFGSRDGDGAAAMRYTEARLTP
IAELLLSEIDMGTVDFVPNYDGAFEEPSLLPARLPMVLLNGASGIAVGLA
TEIPPHNLTEVAAACVALLDDPELDTAALMQYVPGPDFPGGGQIITPVAD
ILSAYETGKGSVRVRAKWEVEKLARGQWRAIVTELPPGSSAQKVLAEIEE
ATNPKLKAGKKQLSQDQQNLKKLMLDLLDRVRDESDSESPVRLVFEPKSS
RQDPDEFMNILLAQTSLEGNASLNLVMIGLDGRPGQKGLKPILTEWIDFR
RTTVTRRLAHRLAQVDKRIHILEGRMIAFIHIDEVIRVIRESDEPKPDLI
KAFGLTEIQAEDILEIRLRQLARLEGFKLEKELSELREEREGLRHVLDTP
DALTRLIRDEIQADAAKYGDKRRTEIKAAERAVLTQTTADEPVTLILSQK
GWIRARVGHNVELETLSFKDGDGLAAVVETRTVWNAIVLDHNGRAYTIDP
ATVPTGRGDGVPVASLVDLQDGAKPAQLISGRDEDRFVVAGSGGYGFIAK
IGDMAGRVKAGKAFITLDASETVLEPVKLPAAPLEQLQLVAASDSDRLLA
FPAAELKELAKGRGLMLMALDDGAALTAIGLVAGGKALLSTTSVRGKEAE
EKLALEEFAGKRAKKGKLMPKKWRVSRIRELPM
>CV1113 parE, topoisomerase IV subunit B
MTQQQYDESSVRVLKGLEPVKERPGMYTRTTDPTHICQEVIDNAADEALG
GFARKIAVTVHQDGSLSVEDDGRGIPVGLHPQEGVPVVELVYTRLHAGGK
FNKKDGGAYAFSGGLHGVGVSVTNALSTRLEVEVKREGGVHRLVFSGGDV
IEPLARVGDCGPRTSGTRVRVWPDGKYFESPRYSMQELERLLRAKAVLLP
GVAVTLTVEKPSGDEVKAWQYPDGLKSYLAELCNGDEPVAPLFAGEAYIG
DDHEQFAKGEGAQWAMAWFEDGASGESYVNLIPTPVGGTHEAGLRAGVYD
AVKSFIDHHNLLPRGVKLMAEDVWSRVRFVLSARVLDPQFQGQTKDKLTS
RDALKLISGLARDPVELWLNQHVEAGKKIAELAIRQAQSRLKSVKKVEKK
KGSGVAVLPGKLTDCESEDIERNELFLVEGDSAGGSAKLARDKEYQAILP
LRGKVLNSWETDRDQLFSNAEIHDIAVAIGVDPHGPNDDPDLSGQRYGKI
AILSDADVDGSHIQVLLLTLFFRHFPRLVENGNIYIAQPPLFRVDVPGQG
KTRPPRKLYALDEGEMSAILDRLRSEGVRENAWSISRFKGLGEMNPEQLK
DTTMNPDTRRLVRVQVRPGMLQETLDMFVMLMGKGEASSRRGWMEAKGNE
VEADI
>CV3481 phrB, deoxyribodipyrimidine photo-lyase
MSKRYRTALVWLRRDLRLDDHAAFYHALKHSEAVLPVFVFDASILAALPR
DDRRVDFIWQSAAALKAELNQLGGDLLIRHGLPQHEIPRLAAELGAEAVF
CNRDYEPAARARDAEVAQRLAEQGVAFRDSKDQVIFETDEVLTGAGKPFS
VFTPYKNAWLKKLTPFHLQAYPVRRYLDALMPREPQSMPSLADIGFLPSD
LASLPVKAGAAGAEALFADFAGRIERYKAQRDFPGVKGVSYLSVHLRFGT
LSIRRLAAYAWHDGGEGAMTWLSELIWRDFYQQVLWHRPDAAKHAFKPEY
DALPFPNDPEWFDAWREGRTGYPLVDAAMRQLNRSGYMHNRLRMVAASFL
VKDLLIDWRWGEQYFAEKLLDFDLAANNGGWQWAASTGCDAQPYFRIFNP
VSQSEKFDPDGRFIRRYVPELAALPDKLIHAPWQAKPEQLMSAGVRLGRD
YPHPIVDHAVQRELALALFKR
>CV0779 polA, DNA-directed DNA polymerase I
MKTLLLIDGSSYLYRAFHAMPDLRSPDGRPVGAVYGMVNMLRRLEKEVEF
DYSACVFDAKGKTFRDDLYPEYKANRPSMPEELASQITAVHDVVQASGWP
MLVVPGVEADDVIGTLARLGAAAGMKVIVSTGDKDMAQLVTPDVTLVNTM
TNELLDEAGVKEKFGVPPSLIIDYLTLIGDKVDNVPGVDKCGPKTAVKWL
EEYGSLDAIIAQAGSVGGKVGENLRAALDWLPMGRRLITIDCDVDLEADL
PHGLPGLQHGQKDKPRLAELFQDLGFRTFYREVTEGAEMPAVAQRGEDAP
RGGEAQGDMFAEPAAPAAPPALSAGALERHYETILTEAQLDAWLARLMAA
KVVSFDTETTSLDPMQARIVGVSFSVEAGHAAYLPLEHHYAGAPQQLPLE
AALAKLKPWLEDASKKKCGQNLKYDCHVLANHGIALAGIADDSMLASYVL
ESHQRHNMDDLARRHLGENTVSYEEICGKGAKQIGFSEVDVDIAANYAAE
DADITLRLNQFFAGQLFGDLEKVYRDIELPVAEVLFKMERHGVLIDRDKL
AAQSHQLGSQMLELEQRAYELAGQPFNLNSPKQLQEILFGKLAIPTKGVK
KTPSGGYSTDESVLEQLALDHPLPKCILEYRGLAKLKSTYTDKLPTLIYP
QTGRVHTTYAQAVAITGRLASNDPNLQNIPVRTAEGRRVREAFIAPAGWQ
IVSADYSQIELRIMAHLSDDEGMLKAFASGEDIHRATAAEVFGVELAAVT
SDQRRAAKAINFGLIYGMSAFGLAAQLDIERSAAQQYIDRYFMRYPGVAE
YMQATREKAREQGYVETVFGRRLYLPDIKLSNPGRRAGAERAAINAPMQG
TAADLIKLAMIAVQDWLERDGLQSKLIMQVHDELVLEVPQAELEQVKRRL
PEIMAGAAELKVPLLAEVGAGDSWEAAH
>CV1124 priA, primosomal protein N`
MNGPVRIQVAVDVPLAGTFSYLTESSVMPGSRVSVPFGNRRVCGVVVTPI
PGEGVAEVDAAKLRRIDGVLDGLPPLPDDFLALARFASDYYHHPLGQTLF
TALPTGLREPRDVSRPDRRPFALTAAGLAEPPPARQRARLALWQALQDGP
LDLAAAKAVTPQAGKLLADWLAEGKAERATPERPPLRLGDAPALNDEQQA
ALDALLASEGFQPWLLHGVTGSGKTEVYLRLIAEQLAARAQTLVLVPEIN
LTPQLINRFADRFPDSRIVVQHSHLADGERLHGWLDAWHGDADVVIGTRL
SVFTPLPRLGLIVVDEEHDGSFKQQDGLRYHARDLAVWRARRAGVAIVLG
SATPSLETVANVEAGRYKRLTLSRRAHGAARLPEVRLVDTRRKKLAEGLS
EPVLEALQARLARKEMSLVFINRRGFAPVVACSACGWTSGCPHCSAKLVV
HLMERKLRCHHCGWEEPVPRACPDCGDPDIKPLGEGTQRLESALQRMLPD
ARVLRIDRDTTSRKDAWDEVYRKVHGGEVDILVGTQMLAKGHDFGTLSLV
AALGADGGLYSADFRASERLFAQLMQVAGRAGRADAPGEVLVQTQWPDHP
LYQALVAHDFDGYAATLLTERRQAGFPPSTFQALLRADSPELARATAFLR
QARETLEPLAEGVLISGPAPALMARLAQRERAQLVLESPQRGALHRLLDS
LPPMLDGLAKAHGRALRWSLDVDPQEL
>CV3639 priB, primosomal replication protein
MQNRLVLTVTVDREDALRYTPAGLPVVEMWLKHQSRQSAGGFERDVACDI
QAVWVGEEAKKHAGKLAGRVMNVTGFLSQRSLRNPRLVLNIEYVEFVKG
>CV3079 radC, DNA repair protein RadC
MSIASWPESERPREKLLSQGAATLNDSELLAIFLRTGIKGVNAVELARRL
LQEFGSLSALLAAPLPAFKAKPGLGEAKYAQLMACTELARRALSEQMRLG
DALSSPQQVRDYLRLSIGRREVETFVVIFLSAQNRLIEVEEVFKGTLTET
RVYPREVLRRALRHNAAALIIAHNHPSGVSEPSSADRVLTDTLKRALELV
DIRLLDHFVVTGGHAESFAERGWL
>CV3548 rdgC, recombination associated protein RdgC
MWFRQLSFYRLSGESLVDADKLLQALEKRPFQPCMGLDWFSEGWVAPAGH
LEAPVYAARGSLMVSMRREDKVLPASVIRDFVEMKVQEIEDKELRKVGRK
EKLALKEQITDDLLPRAFVRSGRTSAYLDIARGWLMVDSGSSSKAEALVS
KLREALPPFPAALPRTRIAPHTAMTDWLAAGEAPGGFELDADCELKDGSE
NGAVVRCSRIDLTSDEIRQHIATGKQATKLGLIWNEKIRFQLTDTLQLKR
IQFLDMLQDEASQAGDDRESLFEATFILMSEELGELVEALVEALGGLEDS
QAQPAASSPAPTPAPQTAPADSGGAVDVPWD
>CV1607 recA, RecA protein
MASEDKSKALAAALAQIEKQFGKGSIMRMSDNQITENLQVISTGSLTLDL
ALGVGGLPRGRVVEIYGPESSGKTTLCLQAVAEAQKLGGTCAYIDAENAL
DPVYAQKLGVNVEDLLISQPDTGEQALEICDMLVRSSGVDVIVVDSVAAL
VPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTLVIFINQIRMKI
GVMFGNPETTTGGNALKFYASVRLDIRRTGGIKKGDEVIGNDTRVKVVKN
KVSPPFRQADFEILYGEGISRQGEIIELGVKHGFIDKSGAWYAYNGQKIG
QGKDNTREWLKANPAIADEIERKIREAVGVKIEINENQGDEEFADDAFDA
>CV4076 recB, exodeoxyribonuclease V, beta subunit
MNAPQALDALNCPLQGVNLIEASAGTGKTWTIAALFARLLLEERDGAPPP
AIERILVVTYTKAATAELRERLRRRLAEMLALLDGKADGDDFLRALAARF
PEGPARDVARQRLTAAVNGFDAAAIYTIHGFCQRVLTDAAFESGQTFQAE
LVEDDAARLAEIVDDFWRRRIVAAPLLAQVLVERGETPDAWLAEIRPYLS
KPYLKLRAPDAVRLENARWVASERWRLLASAPEQVEEGLALFLAHPGFKA
NIYRPDTMARAADNLRGWLAQPDALPELDSDSRKLLDKLRPEALAKGMKK
GCDAPAHPLFERMEAWLAAWDVYMDQVANSLAGLKLELIAWANEELARRR
GVERSRSFDDLLTDLGAALDHPATGPLLAAQVADSFSVALIDEFQDTDPT
QYRIFRRCFVEEARPVFLVGDPKQAIYSFRGADIFAYLAARHDAERQYTL
DTNRRSDEPLVATVNALFGRELPFLLDGIAYQPVAASPSSGGRLEVDDDR
APFNAQWLPAGEKELSKEAAELAAAEACADEIARLLTLAGEDRAAIVKGA
SRRRLAGGDIAVLVATHSQGDRVRSELRARGVASVALTQESVFASREAGE
MLALLHAWAEPANEGRLRRALATELAGLDAARIQAELEDETRWERQLLKN
ADDHQRWREHGFMAAWRHYFARERAAERLLPLPDGERRLTNLGHLAELIQ
QESEGRQGMAPLLAWFAARVADPPRGEDAVLRLESDAALVKIVTVHTSKG
LQYPVVFCPFLWNGALERRGAGFWSYHDGDEPWLAPEAAADDGIRQAARS
EMLAEKLRLLYVALTRAQYRQYISWGWVRELKTAALSWLLHAPGARDLAA
LEALELDGGTVAAQLRAFLDQRGGAARWLEAEGRQALAGGRDPGRAYAAL
PFERRLYAPWKIASFTSLTHDAGSHLAEAPDYDRAAAPAPAEPAADPVRD
RFSFPRGAKAGVCLHEIFENIGFGDAEDDIRAAVQRALARHGFGEEWLDA
GCDLILGALNAEIAPGARLRDVADHKRLIELEFTLPVKKLDVAALIAALQ
KPAHGLAEPFRRAAAGLDFASVQGFLKGFVDLVCEAGGRVYLIDYKSNHL
GDACDDYRDDSLVHAVAREHYYLQYLIYLVALRRYFAARGADWDGRFGGV
RYLFLRGMGEPGCGVWADMPSTALLDALDALLAGSGTKRGPGSSTQ
>CV4077 recC, exodeoxyribonuclease V, gamma subunit
MLFLYQSNRLEQLGELFCGMTQAMPLADPFAAETVIVQSRGMGRWITLDV
ARKAGIAANIDFALPAAFAWRLMQKVMPDLPRKSAFVPEVLAWRLLALLP
SLSGEPFGPVLHYLEGGEAAAFELAGKIADIFDQYLVFRPDWIRAWEAGE
LLGLGEDEAWQASLWRRLAESDPGRHRVRMLDQFFADLKPEHLPPRVTLF
GIASLAPMYLALVKRLSQLTDVCLFTLNPCEAYWGDIVDARRLLKLRQAG
DLFATQGHPLLSSLGKQGRDFFELIAEDAELDAKPLFAAPKGDGLLARLQ
RDILQLNDPSQLPRPFDPADASIEVHACHGPMRELEALKDRLLAMFAADP
KLSPADVAVLTPDINAYAPYIDAVFGRRDDAPNIPYSIADRRVEREQPLL
STFAAVLKLADSRFAADEVLALFDCPALLARFDLADADLAFIQDWVRDAG
IRWGRDAAHKASLGLPAEAAYTWRWGLDRLLLGTVLPPALAGDDAGLFAG
LLPYTAAQGQLGETLARFAGFYDALDALADAWSQPAAPQQWAQRFHQACD
RLFLAEGDDEAALELLREALAELAENADLAGFGQPVGLAVARDWLLRKLS
SSSAQGFLSGGVTFCAMVPMRSIPFQALCLIGMNDGAYPRDERPVSFDLV
ARNPRRGDRSRRFDDRYLFLEAILSARGRLYLSYVGQSARSGEPLPPSPL
VSELLDTLSAMCGEDMAARLTLRHPLQPFSPKAFDGGDARLASFEPAFAA
ALAAPPAEPAPFVAPLPDEGAATVVNLHDFIRFWQNPARAWLADRLALRV
AYSGDAQPAREPFAMARDASHALRRQLVEAMLHGKPPQPVRQRVAAAGLL
PCGELGQAWLQEEGRASVRLAGRLPGALRGEALPPQPVHLEIAGFTLVGE
LYGLRPEGRLDFIVGKMNAAQRVALWLSHLILCASRPAGIAPHSACYDDA
GSTLLHDEIDAAGLLVPWLARWKQGQAQPLPFFGRTSWAYAEALAKNPDK
PDKALAAAWQKWEPNFILGDGVAQKDEPAIALAFRHQSPLEDPLFAQLAE
TLLLPLAERLQGGEA
>CV4073 recD, exodeoxyribonuclease V, alpha subunit
MRTDTPLLPGQLARLFQRLAPDVDDRVLALIGELSNANLAGHVCLPLAHR
GEAAALRGSPLVGRPGEYAPLILDEAGRLYFARHWHDEDRLVQGLERLAQ
PLPPQDEARLADWLNRLFPGAGDGEPDRQKLAAALAARQRLMVISGGPGT
GKTTTVVRLLALLAAMSPRPLVMAMAAPTGKAAARLSESVRAARDRLDAD
DAVRRQLPAQAETLHRLLGLRPGVEAPRHHASNPLPLDVLVVDEASMIDL
SLMARTVAALPSQARLILLGDRDQLSSVEAGAVLGELCGRIAYRDETSQW
LQRVAGAVLQGDAAPGGALTDCVALLTRSHRFGADSGIGELARRVNAGEG
QGSLHVLDDAGWPDVWRQDAADDAELLARRRGYLDAVAAGAGADEAQRAF
SAFMLLAAERRQVADCNRRIERELEAAGVKQPGRDWYPGRPVMIGENDYG
LGLFNGDIGFALQRPSGLRVLFPSADGGWREFAPGRLPAHETVFAMTVHK
SQGSEYDEVWLQLPQQAGALLNRALLYTAITRAKLRFAAVGDAEAWLRGA
ELAPRRDSGLGDRLH
>CV0933 recG, ATP-dependent DNA helicase
MNSPIDLANQPPAAPAALVKKLEKLGIRRRFDLVLHLPLRYEDETHIYPI
ADAPYGQPALVEGTVTAHEVSYKPRKQLRVQIEDGSGTLMLRFIHFYPSQ
LKQFAEGSRIRALGEIRRGFAGDEMVHPKTREVREGAPLADSLTPVYPTV
NGLTQPVLRKLVHAELKSQRLDELLPAPLMAPLALQPFADAIRLLHQPPP
EWSAQQLADPRLPAWQRLKFDELLAQQLSMRLAYRARRLGHAPRIAGDGS
LSGKLLASLPFQLTGAQRRVLDEIRADLRQPHPMHRLLQGDVGSGKTIVA
ALAALSAIEAGYQVALMAPTEILAEQHYLKLSGWLAPLGLGVSWLSGSLR
KKAKQQALDEIASGQCRLAVGTHALFQDDVAFQKLGLAIVDEQHRFGVGQ
RLALQDKGEEPHQLMMSATPIPRTLAMSFYADLDVSAIDELPPGRTPIVT
KLIGSPRRAEVVQFVEKTCAEGNQAYWVCPLIEESEALQLQTAVDCHQQL
QQDLPGRRIGLVHGRMKAAEKAEAMAAFGAGQLDVLVATTVIEVGVDVPN
ASLMVIEHAERMGLAQLHQLRGRVGRGSARSVCVLLFENPLSDLAKARLK
VIYENTDGFEIARQDLQIRGPGEFLGARQSGLPMLRFADLEQDQALLEAA
RDLAPVLLERWPREAEAHLERWLAGREQFLKA
>CV2475 recJ, exodeoxyribonuclease VII
MSQIVTREVPAELQQKLLGQGLTPLQARLYAARGIADSEELDYGLKGLLP
YQKLKNVEAMASRLADAIAAKQRLLVVADYDADGATACAVAVKGLSMLGA
IIGFIVPNRFEYGYGLTPEIVELAAQKRPDIIVTVDNGIASVAGVEAAKA
RGIEVLVTDHHLPGDTLPEALIVNPNQPGCEFPSKNLAGVGVMFYVLMAL
RVEMRRRGVFDEQTQPNLGVLLDLVALGTVADVVRLDRNNRTLVENGLKR
MRAGRMAPGIAALFRVAGRAHYKANTFDLGFTLGPRLNAAGRLDDMSLGI
ACLLASNEEQAMRLAQELDKLNRERRGIEAGMQDEALAALSGIDAGNRYT
LSLYRDDWHQGVVGIVASRLKERFHRPAIVFAPGDEGEIKGSGRSIPGFH
LRDALDLVYKRHPGLILKFGGHAMAAGLSLDESRFAEFQQAFEAVARELL
DEKQLTRMIETDGSLPARDLSLQLAETLAAEVWGQGFPVPYFHDQFMVVN
QKLVGDKHLKLRLAREGCEFDAMLFNHADWLPDRIQAVYQLIANEWQGRK
ELQVYLQHWAAA
>CV2321 recN, DNA repair protein recN
MLLSLTVKDFVIVDSIALDFSGGFTVLTGETGAGKSIMLDALGLLLGDRA
DGTQVREGAERAEITAEFSTENRPEVDAWLDENELSGDEGVLLLRRLIDR
GGRSKSFVNGQAATLAQLKQLGEFLVDIHGQHAHQSLMKSETQRQLLDAY
AGSATLARDTHKAWQEWQAARQARQDAERMSRESEVERERLTWQIGELTE
LNLLPDEWTTLSQSHTRLANSAELVQSAQQAVDVLSENDDSCLSQLAHVQ
SRLSKLSNLDPRLSDTLSLLDSVDAELREVVYSLRDYASDIDQDANQLVE
MERRLDLLMSTARKYRVQPADLADKLADWQQQLAALEASVDVEALSVAEA
ASLARYRALAEALSGKRRQAASELSERISGEMGRLAMGGARFAIELSALA
EPGAHGMESIEYLVAANAGTSLRPLAKVASGGELSRISLAMQVVISQVAS
VPTLIFDEVDVGIGGRVAEVIGHMLRDLGQRYQVLCITHLPQVASCGKHH
WQVSKREHKGQVLSSIAPLDAEQRVLEIARMLGGVELTQTTREHAAEMLA
SNAAAL
>CV2069 recO, DNA repair protein
MSQPGRVDKQPGYILHTQPYRETSLLLEVLSRDHGRFSLVARSARRPRSD
LRGVLLPFQPLTLSWFGKGELRTLHAADWDGGVRALTGLPLVCGFYLNEL
MMKLTARDDPEPRAFSVYDRAVRELAGGAPLSTALRRYELRLAQVLGYAP
ALSRDSRGEAIAADRHYLCRDAALPEPDEHPELAPVGRVVRLPGEALLAL
DADDYREPATRGHARLLSRVWLSALLGDEPLASRQLLQAIQSLSD
>CV0477 recQ, ATP-dependent DNA helicase recQ
MALSSALPRPVMHDAVSILNHIFGYPEFRGQQQEIVEQVAHGGHALVLMP
TGGGKSLCYQIPALLRDGVAIVVSPLIALMQDQVATLQELGVAAACLNSA
TSPDEARDIARQARAGTLDLLYVAPERLLTPRFQEFIASLKIALFAIDEA
HCVSHWGHDFRPEYQQLGLLAEQFPQVPRIALTATADEQTRLDIIHYLKL
AEARVFLSSFDRPNLFYQVVEKHNAKKQLLDFIRQEHQGATGIVYCLSRK
RVEDTAQWLRENGIEALAYHAGMSHAEREANQRLFLREDGIVMVATVAFG
MGIDKPDVRFVAHIDMPKSPENFYQESGRAGRDGLPSASWLCYGLNDVVQ
LRQMIEGGEMAELQKQVELSKLDAMLAFCETAGCRRQHILAHFGEASKPC
GHCDNCLHPPITYDATEPVRKLLSCIYRVGQRFPTGHVIDVLLGRQSPSI
GHHRHDQLSTYGIGKDMNQRWWRSIVRQLVARQLVQVDIARGQSLVLTDA
CRPLLKGEQSIYLRPLADEKKSRGSGGADRWLRTEREERLWQALRRWRRQ
VADEHNVPAYAVFSDRTLRDLVEKRPDSPAGLQRIYGLGELKLARYGEAL
LDCLREAQE
>CV1612 recR, DNA repair DNA recombination zinc-finger protein
MKNPPALEQLISALKVLPGVGPKTAQRMAFHLLQRDKQGADKLARALDRA
LTQLTHCQRCNTFSEAELCAICADETRRRDQLCIVEMPADLMMLEQAKCF
DGLYFVLMGRISPLDNIGPKDLHLDKLLARALDGQVSEIVIATNFTAEGE
VTSHMLSELFKERGLTVTRIARGMPVGGELEYVDLGTLAQAVYERRGV
>CV4068 rep, ATP-dependent DNA helicase
MSAPLLNPPQRAAIHYLDGPLLVLAGAGSGKTRVITYKIAHLVREGGIPA
RHIAAITFTNKAAREMLERVGKLMSSAEIRGITVSTFHSLGMHILRQEAP
HLGYKTQFSILDAYDAGKIIADILNTTSKDEIRKVQSQISLWKNDLKTPD
DMLLAAQDQWESVCAKTYLAYQDTLTAYQAMDFDDLIRLPVQLFREHPEV
LLKWQGKLRYLLIDEYQDTNTCQYQLVKLLTGVRGLFTAVGDDDQSIYAW
RGANMENLRLLQQDFPALKVIKLEQNYRSTARILRAANSVISNNPKLFEK
QLWSELGLGEPIHVVQCKDEEHEAETVVQRLLAHKFECRTEFKDYAILYR
GNYQARIFEQALRNQRIPYQMAGGQSFFDKPEIKDLLAYMRLIANPDDDP
AFIRALTTPKRGVGAGTLEKLGAWAGQYGKSLFAAAHDAGLRVQVQQAQL
APLEQFCDFISQLQYRATREEAGKLSLELLQAIGYEAWLYDSEDSPKIAE
TKWKNLLEMVAWLAKKGEADGKNLIELTQTIALITMLEGRDEGEVDAVRM
STLHASKGLEYPHVFLVGCEEGILPHSESVENGMVEEERRLMYVGITRAQ
RSLTLSYCVKRRRAGEWQFIEPSRFISEIDGEDLRHFGKPGAEPLVSKSE
GKSRLANLTAMLAGKDKSGEMPD
>CV2892 rhlE1, ATP-dependent RNA helicase
MTFSDLGIAPTILRALQAAGYENPTAVQAEAVPAAIAGRDLLVSAQTGSG
KTAAFLLPALTKLSERSTAKGQGPRVLVLTPTRELAQQVEKNALEYGKDL
RWMRTACLVGGSSFGYQIRALSRPIDLIVATPGRLMDHMRSGRIDFSRLE
MLVLDEADRMLDMGFIDDIEAIVKATPETRQTVLFSATLDGIVGRMAEKM
TRDPQRIEIARTETSGGTIEEHLLYADDLNHKHRLLDYILKESGFDQCVI
FSATKAYSEELADKLSDQGYSAACLHGDMPQSWRNRTLNDLRRGRIKVLV
ATDVAARGIDVPTITHVVNFDLPKQAEDYVHRIGRTGRAGRDGTAITLAE
SKEFHKVRRIEQYLKRQITEGVIDGLEPTRRPPKGPRRNNNGKGGYGDRR
HGSGNGRGGYGNNRREGGYQGQRREGGYQGNRGPRSSAQ
>CV2841 rhlE2, ATP-dependent RNA helicase
MPFASLGLQPDLVQSALEQDYVRPTAIQSAAIPAILQGGDVLATAQTGSG
KTAAFCLPLLQQWLDSPRAILRQPRALILLPTRELAAQVGDILRDLAQSL
PRKLKVAVVYGGVSINPQMMALRGGADIVVATPGRLLDLLDHNALRLSAV
KTLVLDEADRLLDLGFADELGSVLDRLPPARQNLLFSATFPPAVRALAEK
LLKQPLRIDIEHAAATAPDIRQRAIEVDAGKRTLLLRHLLATRDWDKALV
FVASRQAADRVADKLRRNGVPAAALHGDCSQGQRGQALADLKSGRLRVLV
ATDVAARGIDIARLPLVVNYDLPRSPVDYTHRIGRTGRAGARGEAISFVS
ADCAAHFRLIEKRQQLRLPRERIAGFEPTETAIAAASLTDPDGNGGIKGK
RKSKKDKLREAAAMQEAGGN
>CV0383 rhlE3, ATP-dependent RNA helicase
MSDLTFADLGLADPLLRAVADTGYTTPTPIQAQAIPQVLQGGDLLAAAQT
GTGKTAGFTLPLLQLLMCSPSHHAGRPRALVLTPTRELAAQVEESVRTYS
KYLPLKSLVMFGGVNINPQIKALRAPVDILVATPGRLLDHVGQKTVDLSG
VEILVLDEADRMLDMGFIHDIKKVLAKLPAQRQNLLFSATFSDEIKALAD
KLLDNPKLVEVARRNTTNELVSQKVHLVDRDKKTELLIHLIREQNWFQVL
VFTRTKHGANRLAEKLDKIGIPAAAIHGNKSQNARTRALADFKSGELQVL
VATDIAARGLDIDQLPHVVNFELPNVPEDYVHRIGRTGRAGSPGEALSLV
CVDEFSFLRDIEKLIKMSIERFTVPGFEADLNVKPEPIPMGGGARGRGQG
QGRGGQGQGQRHGQGQGQPRNAPAKPRHQTESKPAGHGRNGGPRQGQGAG
QGGRAAKPAAAKSALFSPPKNR
>CV1003 rhlE4, ATP-dependent RNA helicase
MLFSELGLSPEILRAIDEQGYSQPTPIQEKAIPLVLSGRDLLAAAQTGTG
KTAAFMLPILERLKKFANTSVSPAMHPIRALVLSPTRELADQIGVNVQTY
TKYLPLRATTVFGGVNMDPQTQELRRGVEILIATPGRLLDHIQQKTVQLN
KVEVLVLDEGDRMLDMGFIQDIRKIMGMLPKERQTLLFSATFAPEIKRLA
ADFMHAPQTVEVARQNATNDQVEQLVFQVDNFKKRQLLAHLIRSREMSQV
IVFCKTKISADQLARDLKRDGLDAEAIHGDKTQGARLETLAGFKEGKLRV
LVATDVAARGLDISELPYVVNFELPTSPEDYVHRIGRTGRAGAKGIAISL
MCPDESRQHEAIEKLTKQTLTPQSVDGFWPSWLPRPKPAREPSSASPSMP
ALSAGKSEGLKQARPGRRSRKAKREIPALLLPPRYKVEIIR
>CV1256 rnhA, ribonuclease H
MTTEDRVEIYTDGACKGNPGPGGWGALMRYKGKEKELFGGERGTTNNRME
IMAVIRALAALNRPCKVVVYTDSQYVQKGISEWIHGWKARGWKTAAKEPV
KNADLWQQLDAERNRHLDVEWRWVKGHAGHEFNERADQLANKGVESV
>CV2210 rnhB, ribonuclease HII
MPLKLRVAGVDEAGRGPLAGAVFAAAVILDPAKPIAGLADSKVLSEAQRD
ELAVLIKRDALAWCVASASVEEIDKLNILHATMLAMTRAVEGLPVRPDLA
QIDGNRVPKHLPVPGEAIVKGDAKVAAISAASILAKTARDAELVALDALH
PQYGFARHKGYPTAEHLAAIEAHGVLPAHRKTFGPVKAWLASHQGALF
>CV4223 ruvA, holliday junction DNA helicase
MIGRLSGKLIEKLPPQVVVDVNGVGYEVDVPMTTFYQLPALGQPCTLFTH
LAVREDAHLLYGFASKEERQTFRQLIKVTGIGAKIALAILSGMTADELAI
AVASEDIKRLSAVPGIGKKTAERLVLELRGKLATGGNLTVPGGLPFAATP
DEKSDIVNALLALGYNEKEAAAATKSLPADVTVSEGVRLALKSLMKV
>CV4215 ruvB, holliday junction DNA helicase ruvB
MIETDKLFGAAPERRIVTPQRASEQEEALERALRPKLLDEYVGQKKAREQ
LEIFIEAAKKRGEALDHVLLFGPPGLGKTTLAHIVAREMGVNLRQTSGPV
LERAGDLAALLTNLEPHDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIG
EGPAARSVKIDLPPFTLVGATTRAGMLTNPLRDRFGIVARLEFYNAEELT
RIVSRSAGLLNVQLSDDGAFEVAKRSRGTPRIANRLLRRVRDYAEVKSDG
VVTMAVADAALAMLDVDPAGLDVMDRKLLQAILEKFSGGPVGLDNVAAAI
GESTDTIEDVIEPFLIQQGYLQRTPRGRMATAQAYLHFGLPVKDA
>CV4225 ruvC, crossover junction endodeoxyribonuclease
MSRRILGIDPGSLITGFGVIDVVGNQRHYVASGAIRTKSGSPLAERVKVL
VDGIHQVIDTYRPTEAALERVFVNVNPAATLMLGQARGACMTALVLKDLP
VAEYTALQVKQSVVGQGKAPKEQVQYMVVRMLNLSGTPQADAADALAVAL
THANHSGGAIGKLALRGLKVRGGRLV
>CV1329 sbcB, exodeoxyribonuclease I
MSNHTFFWHDYETFGAVPRQDRPSQFAGIRTDAELNEIGEPVMLYCRPAP
DYLPTLQACLLTGITPQLCRQQGVAEHEFAGVIERELATPATIGVGYNSL
RFDDEVTRFLFWRNLIDPYAREWQNHCGRWDLLDLVRATYALRPDGIVWP
KHEDGRTSFKLEHLSAANGLAHASAHDALSDVRATIALARLIRQRQPKLF
DYYLTLRKKDAVKVQLSLHDPKPVLHVSGMYGVERGNLAVVWPLAAHPTN
ANEVIVWDLAHDPAELRGLSADDIRQRMFTRADELPEGVARLPVKTIHIN
KSPFVVANLKALGDDNAARWGMDLAAIHRHAEAARALPDLSALWRRVYQR
EAGEPQDVDQNLYGGFVSNNDRKALQKMRRLSAAQLAGEMALFEDPQLAE
LLFRYRARNFPDTLSGDEQKRWKAWCQARLAQSWPAFQQELAELRAGELT
DGQRNLLQQVADYAASLQASLA
>CV4267 smf, smf protein
MSGAPQAWLTLALTPGIGPVGFLKLIDAFGSAEAAAAARPAQTEKLVGRE
AAEALQAGAAAESAQAALAWAEGDGCHLITLLDADYPAQLAEAASPPPLL
FARGRRELLARTMLAVVGSRAATQQGKRNAEDFASALAAHGYTIVSGLAS
GIDAAAHQGALAHPASTVAVIGTGIDRVYPASNRQLAHRVAEHGLILSEF
PLGMGPLPGHFPRRNRIIAGLARGCLVVEAGIASGSLISARLAMENNRDV
MAIPGSIHNAQARGCHRLIKDGARLVESVDDVLDEIGRLPAAPPPPLRQE
EPETPPLLNSMGWEPVLADALAGTLGLTPGEVYAMLLELELAGRVASLPG
GRFQRLAQL
>CV1889 ssb, single-strand DNA-binding protein
MNSITFDGRLAADAELRYTPSGEPVLSFRVASDIGFGERKSTNWFSCQVW
GKRGESLKNYLAKGQQVTVYGQLTLREWQDKDGNKRLSPDVRVNELSLQG
GRSEMGASSGGGMGGGMDDGYGYSAPAPRQEAPAAPRRQEPKPAPRMDDM
DDDIPF
>CV1945 tag, DNA-3-methyladenine glycosylase I
MNEIQRCAWCGDDPLYVAYHDREWGRPERDDQKLFEMLVLEGAQAGLSWI
TILRKREGYRAAFHGFDPAKVAAMTDDDVERLMQDPGIVRNRLKIQSAIR
NAKVFLRMQREHGSFADWLWAHVDGQPILRRRDDARVPASTELSDRISKA
LKKAGMNFVGSTVVYAYLQACGVVNDHLSGCFLHPDPGG
>CV4269 topA, DNA topoisomerase
MPTSLLIVESPSKAKTLKKYLGPDFEVLASYGHVRDLVPKNGAVDPEKDF
AMKYQLIARNSKHVDAIVSAVREADHVYLATDPDREGEAISWHLVQILNS
KKLLKDKTAQRVVFHEITKNAVLDAIQNPRDIAQDLVDAQQARRALDYLV
GFNLSPLLWKKIRRGLSAGRVQSPALRLICERENEIKAFVQQEYWSVHLD
SHKSRTKFSAKLTTLGGKKLDQFDIPNEAEQASVLARLQGLPATVGSIEK
KKKSRSPAAPFTTSTLQQEAVRKLGMTTDRAMRTAQQLYEGMDIGQGTVG
LITYMRTDSVALANEAVEEIRGYIGLKWDADYLPKNPAVYKSKAKNAQEA
HEAIRPTSILRTPEMVKPFLTTDQFKLYDMIWKRTLACQMAPAKFDTTSV
DIMVGEGVFRASGQVQTFAGFLAVYEEDVDDAEDEDNAKLPLLTEGEDLP
VDKLYGEQHFTQPPPRFSEASLVKALEEFGIGRPSTYASIISTLKDREYV
ILDKKRFLPTDTGDIVNKFLTEHFAQYVDYNFTAKLENQLDEIANGGRQW
VPVMDTFWKGFKKQIDEKESISRAEVTTESLDEDCPKCGKPLSIKFGKRG
RFIACTGYPECDYTRNMGETAEQAAEEAEAPTVIEGRSCPDCGGELHIKK
GRYGKFIGCANYPKCKHIEPLEKPRETGVTCPECKTGQLIERKSRYGKLF
YSCNTYPKCKYATWNPPIAEPCPQCNWPILTIKTTKRRGTEKVCPQKECG
YAEQIAPPEGKDAAPAEEA
>CV2612 umuC, umuC protein
MWTLPGAVQIGIPVSVGIGPSKTLAKLANHVAKRVAGWDDGVFDWSWLSP
AETDALMARLPAGKVWGVGPRLAAGLAEKRIDTALKLKRADPRWLQRNFS
VTLERTAAELNGVSCLSLEEAAQPRQQIISSRSFGEKTSDLAVLSAAVSH
HIARAAEKLREQGSAARLVGVSARTSPFGDDPYHGYTVVPLAQPSDDTLE
LAAAALAGLRAVYRRGLRYQKAGVVLMELSPRERRQADLFAAAPDPRRQR
LMRTLDAINRAYGHSCVKLASEALTPNWEMRQDQRSPCYTTRFDQLPTAR
A
>CV0232 ung, uracil-DNA glycosylase
MTYLAPALARIHPDWEAVLDQAAVAARLAEIDRLLVLQQQDGKTLFPPPP
QVFNALAFAAPADVKVVILGQDPYHGDGEAMGLSFSVPDGARVPPSLRNI
YKELAADLGLGVPASGDLTHWAQQGVLLLNSVLTVERDKAGSHGKLGWQT
VSDALIDAVNRDNPGCVFLLWGNWAQTKAERIDASRHLVLTAAHPSPLSA
SRGFHGCRHFSQVNAWLIARGRQPVRWATAPAAQSCLF
>CV1893 uvrA, excinuclease ABC, subunit A
MDSIRIRGARTHNLKNVNLDLPRNQLIVITGLSGSGKSSLAFDTLYAEGQ
RRYVESLSAYARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGT
VTEIHDYLRLLFARVGDPHCPDHNVPLSSQTVSQMVDHVLELPEETRVMI
LAPVIVGRKGENLDLFDDLRAQGFVRVRVDGEVYELDAVPKLDKNKKHTI
EVVIDRLKVRADMQQRLAESFETALRHAEGRAIAVEMDSGKEHWFSAKFA
CPVCSYSLPELEPRLFSFNNPMGACPKCDGLGEITFFDPKRVVAHPELSL
ASGAIKGWDKRNQFYYQMLLALGEHYGFSVTDLAFDDLPEKVKHVVLHGS
GRDSIEFSYMSEKGSKFTRAHPFEGIIPNLERRYRETDSMAVREELAKYQ
NNQACPHCSGSRLRLEARHVFIGTRTLHEINQLPLKETAQFFETLEFSGQ
KQAVAEKIVKEIRERVSFLNNVGLDYLNLSRSADTLSGGEAQRIRLASQI
GSGLTGVMYVLDEPSIGLHQRDNDRLLGTLKRLRDLGNSVIVVEHDEDAI
READYLVDMGPGAGEHGGEVLVAGTPADVAASENSVTGAFLSGRRKIALP
GGRRELSEERMLQLIGATGNNLKDVTLKLPLGGLVCITGVSGSGKSTLIN
DTLYKIAARDLNGASEEPSPYREIKGLDQLDKVINVDQSPIGRTPRSNPA
TYTGLFTPIRELFSGVPLARERGYGPGRFSFNVKGGRCEACQGDGVIKVE
MHFLPDIYVPCDVCHGKRYNRETLEVQYKGKSIQEVLEMTVEQALEFFAV
VPPVARKLKTLMDVGLGYIRLGQSATTLSGGEAQRVKLGLELSKRDTGRT
LYILDEPTTGLHFHDIDLLLQVLHRLRESGNTVVVIEHNLDVVKTADWLI
DLGPEGGAGGGQIIASGTPEQVAANPVSHTGRYLAPLLARDKG
>CV3152 uvrB, excinuclease ABC subunit B
MLLTFPDSPFQLNQPFPPAGDQPAAIEQLVEGLSDGLSYQTLLGVTGSGK
TYTMANVIARTGRPAIIMAHNKTLAAQLYSEMREFFPHNAVEYFVSYYDY
YQPEAYVPSRDLFIEKDSSINEHIEQMRLSATKSILERPDCIIVATVSAI
YGIGDPSDYHQMILHLKEGETTPQRDIISRLTTMQYSRNDLDFGRGTFRV
RGDVIDIYPAESSDTALRVSLFDDEVETLTLFDPLTGTTKQRVGRYTVFP
SSHYVTPRDTVLRACEQIKDELRHRIEWYQKEGKLVEAQRIEQRTRFDLE
MLYEMGFCKGIENYSRHFSGRGPGDPPPTLIDYLPKNALMFIDESHVTVP
QVGAMYKGDAARKANLVEYGFRLPSAADNRPLKFHEFEQLMPQTIFVSAT
PAVYEKDHAGQVVEQVVRPTGLVDPEIEIRPVATQVDDLLSEIRERMARG
ERVLVTTLTKRMAEQLADYYTEHGVKVRYLHSDIDTVERVEIIRDLRLGM
FDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNL
RGKALLYADRITDSMRKAMDETERRRAKQMAFNAEHGIVPKGVEKKIKDI
IDGVYSVEAERKKLVDEAAVAMMDEKTLSKEIKRLEKEMMEAARNLEFER
AARIRDELKQLKEKAWLSDL
>CV1305 uvrC, excinuclease ABC subunit C
MSKPAFDYRNVLQNLPTLPGVYRMLDAAGKVLYVGKAIDLKRRVSSYFQK
NDLSPRIQLMVRQIASIETTVTRSEAEALILENNLIKALAPRYNILFRDD
KSYPYLMFSGHAFPQMAYYRGEPKKPNQYFGPYPNGYAVRESIQILQKVF
RLRTCEDAVFANRSRPCLLYQIKRCSGPCVDHISKEEYAADVASAVAFLN
GRQSELINELTRRMTAAAEAMAFEQAAELRDQIQALARVQEKQFVASNQS
QQDCDVVAARVRDGVPCVNLVMIRGGRHLGDKSHFPIGGEADTEQEILEA
FIGQHYQHAGVPAALVVNGVVDDALQQFLQERAGRKVYIVGNPIGERRVW
LEMAEKNAELAILQRLGSKATQAQRLAQLNEVLELEDAGRFECFDISHTM
GEATVASCVVYDKGAMQPTEYRRFNITTAAPGDDYAAMREVLSRRYGKLA
EGEGRLPDAVFIDGGKGQVGVALEVLGELGLNLPIVGIAKGEERKPGLET
LILPYLEKTLQLRQDHPALHLIQTVRDEAHRFAITGHRARRAKARTSSTL
EDIPGIGAKRRQQLLTRFGGLRGVATASVDDLAQVEGISRTLAEKIYNAL
H
>CV0205 uvrD, DNA helicase II
MSDLLAGLNPEQLRAVTWPAKSALVLAGAGSGKTRVLTTRIAWLLSTGQT
SPAGVLAVTFTNKAAREMQTRLSALVPVNVRNMWIGTFHGLCNRFLRIHY
RDAGLPQTFQILDSADQQAAIKRLLKSLELSDEKYPPRAVQSFINGNKEA
GLRAESLPPALNPYEAKLVELYAAYDAQCRREGVVDFAELLLRSYELLSR
NEALRAHYSSRFSHILVDEFQDTNRLQYAWLKLLAGEHGALFAVGDDDQS
IYAFRGAEVGNMRALLSDFHVAEPVRLEQNYRSMGNILNAANALIEQNDG
RLGKNLWTDAGEGDKIRFFQAGSDGEEAEFIVDEAKSLHRDGLALSDIAV
LYRSNAQSRLLEHVLVNAQIPYRIYGGLRFFERQEIKHALAYLRLVANPD
DDNALLRVINVPARGIGARSVENLQAASREQGVTLWQAACQSGGGRTAAK
IGEFVLLIEKLREQCRDFNLAETISLVIDRSGLRDMYEQDKKDGEERLAN
LDELVNAAASFLPDQPEQALTEFLAAASLEAGEHQADAGSDALQLMTVHA
AKGLEFDAVFVSGLEEGLFPHENSVMDGKGLQEERRLMYVAITRARKRLY
LSSAQSRMLHGQSRYPIPSRFIDEIPAELIHSLSATVKAPVAPQQARRAA
AAPRRQAENAYGLSIGQAVSHAKFGIGVVIDAEGNGEDVRLQINFAEHGV
KWLDLRYAKLTPA
>CV2372 xerC, integrase/recombinase XerC
MDEAIRRFIEHLAVAGRSPHTLAAYRADIELLENMMQAKSARDATAAELR
KALAKLHAQGLSSRSLARRLSSWRQFYHWLQRNGEREDNPAAGLYAPKRD
KLLPKALPVDGTAALLDRIEGESELDARDRAIFELVYSCGLRLSETVALN
LDDVDFSDSLLRIRGKGGKERLVPIGAEAMLRLRTWLGERSAGMDEPALF
LGRHGHRLGGRQVEKRLRDWAIKTGAGQHVHPHMLRHSFASHMLQSSGDL
RAVQELLGHANLSSTQIYTALDFQHLAKVYDGAHPRARKRGKPDDENKS
>CV3670 xerD, integrase/recombinase
MSSDKDSIDAFLDQLWLEDGLSQNTLAAYRRDLSKLAARLAERGVSLETA
TLADLEQALLAGVASEKPATRARLTSALRRYYQHLSRNGVRQDDPSARLA
SPKQGLRLPKSMSEMDVEALLDAPDVETPLGLRDRAMLEVLYASGLRVSE
LVGMTLNQLNLLDGVVKTMGKGSKERLVPLGEIAQDWLLRYLKEARPLLL
AGQPCDAVFVTQRKAGMTRQMAWHLITQYAGRQGLAKVSPHVLRHAFATH
LVNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLHARHHPRG
>CV3564 xseA, exodeoxyribonuclease, VII large subunit
MTRHHFPDQSQDVISVSSLNRMARDLLEAGIPPVWIGGEISNLTLAASGH
AYFSLKDGGAQIRCVMFRHKLSLLPFRPQEGMQVELRGQVTLYEARGEFQ
INVGEMRAAGLGRLYEAFERLKARLQAEGLFDNARKRELPAHPAAIGIVT
SPAAAALRDVVSTLRRRMPGIPLILYPTQVQGEGSARQIADALRLAGERR
EVDVLIVCRGGGSIEDLWSFNEEIVARAVAASPIPTVSGVGHETDFTICD
FVADRRAPTPTAAAELVSPNREHLAIQLEQTKRALERALSRLLTDKTQQL
DFLGRRLTHPGARLQVQRERLDALSSALGQRVQAAFEQGRWRLQLAGTRL
SRHQPDLDVGKQALRQRQAALLRARDRLLERRAQQLAQLAATLTALNPEA
VLARGYAIVQKQDGRAVKNPAELADREKVTLRLAEGSAEARIEHNQGAQG
QLPF
>CV2690 xseB, exodeoxyribonuclease VII, small subunit
MAKAAKAPASFETALAQLEDIIQAMDSGDMPLETALASYKQGTELIKFCQ
GKLADAEQQLKILENNELKTLDLPNGQ
>CV0877 xthA, exodeoxyribonuclease III
MRFATWNVNSLKVRLPQVLQWLAETGVEVLCLQELKMDQGAFPLAEIEAA
GYRAVWFGQKTYNGVAILARTPLEMTDVVAGIPGYGDEQRRVIAATVNGV
RVICGYFVNGEAVDSPKYPYKLEWLSKLEGYVAAELARHPQLLLLGDYNI
APEDRDVYDPEGWREQVLCSTPERDAFRRLIALGLSDSFRLFNQEEKQYS
WWDYRQMMFRRNKGVRIDHILVSDALKPRAQACEIDKAPRKWERPSDHTP
VVLTLAD