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2024-05-03 04:56:47

Gene list

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COG category: Replication, recombination and repair
Organism: Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, Fiocruz L1-130

Number of genes found: 188

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, Fiocruz L1-130
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LIC10540 conserved hypothetical proteinchromosome I CDS659620 321 - 0.305296
NA LIC13150 ATP-dependent DNA helicase proteinchromosome I CDS3860811 2175 + 0.382069
NA LIC13115 transposase, ISlin1chromosome I CDS3810912 606 - 0.358086
NA LIC10907 conserved hypothetical proteinchromosome I CDS1091629 327 + 0.342508
NA LIC10656 transposase, ISlin1chromosome I CDS800133 1074 + 0.367784
NA LIC12662 transposase, IS1500chromosome I CDS3223746 300 + 0.386667
NA LIC10251 Rad50-like proteinchromosome I CDS285742 2316 - 0.32513
NA LIC10785 transposase, IS1501chromosome I CDS952875 264 - 0.405303
NA LIC11472 transposase, ISlin1chromosome I CDS1820076 606 - 0.371287
NA LIC10616 DNA processing chain Achromosome I CDS754189 984 + 0.367886
NA LIC11167 putative lipoproteinchromosome I CDS1436055 1155 + 0.34026
NA LIC11452 exodeoxyribonucleasechromosome I CDS1789376 765 - 0.398693
NA LIC12553 conserved hypothetical proteinchromosome I CDS3091895 903 + 0.321152
NA LIC10548 uracil-DNA glycosylasechromosome I CDS670544 657 - 0.401826
NA LIC20243 conserved hypothetical proteinchromosome II CDS306560 912 + 0.327851
NA LIC13116 transposase, ISlin1chromosome I CDS3811555 339 - 0.421829
NA LIC11590 exodeoxyribonuclease small subunitchromosome I CDS1949939 288 - 0.333333
NA LIC13389 DNA mismatch repair proteinchromosome I CDS4153049 1833 - 0.330606
NA LIC10005 DNA gyrase subunit Bchromosome I CDS6686 1920 + 0.371354
NA LIC12056 transposase, IS1500chromosome I CDS2489416 849 - 0.369847
NA LIC12915 conserved hypothetical proteinchromosome I CDS3541044 429 + 0.32634
NA LIC11448 transposase, ISlin1chromosome I CDS1786765 381 - 0.383202
NA LIC10885 transposase, ISlin1chromosome I CDS1070768 588 + 0.357143
NA LIC11487 conserved hypothetical proteinchromosome I CDS1835557 552 - 0.29529
NA LIC12043 conserved hypothetical proteinchromosome I CDS2463978 366 - 0.308743
NA LIC11596 DNA mismatch repair proteinchromosome I CDS1955910 369 + 0.368564
NA LIC11074 conserved hypothetical proteinchromosome I CDS1325501 699 + 0.386266
NA LIC10781 transposasechromosome I CDS949924 306 - 0.339869
NA LIC10252 exonucleasechromosome I CDS288059 1086 - 0.368324
NA LIC13067 transposase, ISlin1chromosome I CDS3744253 360 - 0.375
NA LIC13377 transposase, IS1501chromosome I CDS4140791 837 - 0.390681
NA LIC12917 conserved hypothetical proteinchromosome I CDS3542494 273 + 0.347985
NA LIC13063 transposase, ISlin1chromosome I CDS3738996 360 + 0.375
NA LIC13264 MutT nudix family proteinchromosome I CDS4002327 672 + 0.361607
NA LIC12555 conserved hypothetical proteinchromosome I CDS3095230 1035 + 0.332367
NA LIC10415 conserved hypothetical proteinchromosome I CDS473977 519 - 0.373796
NA LIC10380 conserved hypothetical proteinchromosome I CDS429918 546 + 0.333333
NA LIC10106 conserved hypothetical proteinchromosome I CDS126141 336 - 0.39881
NA LIC12222 DNA methyltransferasechromosome I CDS2681540 1095 + 0.360731
NA LIC11471 transposase, ISlin1chromosome I CDS1819711 360 - 0.375
NA LIC12802 conserved hypothetical proteinchromosome I CDS3408674 567 - 0.345679
NA LIC10886 transposase, ISlin1chromosome I CDS1071340 381 + 0.380577
NA LIC10981 transposase, IS1501chromosome I CDS1187339 306 - 0.421569
NA LIC13497 DNA polymerase III subunit-related proteinchromosome I CDS4276081 933 + 0.330118
NA LIC12552 conserved hypothetical proteinchromosome I CDS3091198 720 + 0.326389
NA LIC10014 conserved hypothetical proteinchromosome I CDS18319 1089 - 0.314968
NA LIC12427 conserved hypothetical proteinchromosome I CDS2946281 1233 - 0.36253
NA LIC10941 conserved hypothetical proteinchromosome I CDS1134467 285 - 0.375439
NA LIC11031 transposase, ISlin1chromosome I CDS1271385 396 + 0.429293
NA LIC10265 transposase, ISlin1chromosome I CDS301964 360 + 0.380556
NA LIC12722 transposase, IS1533chromosome I CDS3312795 372 + 0.430108
NA LIC10943 conserved hypothetical proteinchromosome I CDS1135774 630 - 0.406349
NA LIC20067 MutT-like proteinchromosome II CDS73327 588 + 0.37585
NA LIC13061 transposase, ISlin1chromosome I CDS3738039 309 + 0.417476
NA LIC10599 conserved hypothetical proteinchromosome I CDS732816 678 - 0.39823
NA LIC10742 transposase, ISlin1chromosome I CDS906892 360 - 0.369444
NA LIC13160 transposase, ISlin1chromosome I CDS3870611 606 + 0.367987
NA LIC12689 ATP-dependent DNA helicasechromosome I CDS3263508 1449 + 0.343685
NA LIC13114 transposase, ISlin1chromosome I CDS3810555 348 - 0.387931
NA LIC11346 transposase, IS1501chromosome I CDS1661149 627 - 0.393939
NA LIC12737 site-specific modification DNA-methyltransferasechromosome I CDS3333389 1632 - 0.35049
NA LIC10119 methylated-DNA--protein-cysteinemethyltransferasechromosome I CDS138884 414 - 0.350242
NA LIC13457 conserved hypothetical proteinchromosome I CDS4234880 636 + 0.327044
NA LIC10780 transposasechromosome I CDS949354 285 - 0.319298
NA LIC11819 conserved hypothetical proteinchromosome I CDS2212588 1905 - 0.361155
NA LIC13161 transposase, ISlin1chromosome I CDS3871222 360 + 0.377778
NA LIC12890 conserved hypothetical proteinchromosome I CDS3491722 510 + 0.376471
NA LIC13454 conserved hypothetical proteinchromosome I CDS4232730 303 - 0.316832
NA LIC10743 transposase, ISlin1chromosome I CDS907257 747 - 0.353414
NA LIC12051 conserved hypothetical proteinchromosome I CDS2482018 3729 - 0.296326
NA LIC10238 3-methyladenine DNA glycosylasechromosome I CDS274139 687 + 0.356623
NA LIC12589 conserved hypothetical proteinchromosome I CDS3136774 579 + 0.367876
NA LIC11381 conserved hypothetical proteinchromosome I CDS1698641 1986 + 0.41289
NA LIC11639 conserved hypothetical proteinchromosome I CDS2004459 1110 - 0.327027
NA LIC12557 conserved hypothetical proteinchromosome I CDS3098004 768 + 0.352865
NA LIC13102 uracil DNA glycosylasechromosome I CDS3794701 618 - 0.354369
NA LIC10942 conserved hypothetical proteinchromosome I CDS1134751 855 - 0.4
NA LIC10264 transposase, ISlin1chromosome I CDS301371 588 + 0.365646
NA LIC12616 conserved hypothetical proteinchromosome I CDS3164457 525 - 0.358095
NA LIC12297 DNA repair proteinchromosome I CDS2771760 699 - 0.414878
NA LIC10826 putative lipoproteinchromosome I CDS1004318 603 + 0.273632
NA LIC11658 conserved hypothetical proteinchromosome I CDS2023216 429 + 0.337995
NA LIC13021 conserved hypothetical proteinchromosome I CDS3680746 2574 - 0.386169
NA LIC10080 conserved hypothetical proteinchromosome I CDS98030 822 - 0.274939
NA LIC11449 transposase, ISlin1chromosome I CDS1787130 588 - 0.365646
NA LIC13068 transposase, ISlin1chromosome I CDS3744618 606 - 0.364686
NA LIC13347 DNA gyrase subunit Achromosome I CDS4103363 1389 + 0.37005
NA LIC10724 conserved hypothetical proteinchromosome I CDS882540 957 + 0.359457
NA LIC20098 phage-related integrase/recombinasechromosome II CDS114933 900 - 0.356667
NA LIC10888 transposase, ISlin1chromosome I CDS1072657 630 - 0.344444
NA LIC11483 conserved hypothetical proteinchromosome I CDS1830772 1719 - 0.3758
NA LIC13069 transposase, ISlin1chromosome I CDS3745261 273 - 0.406593
NA LIC11245 conserved hypothetical proteinchromosome I CDS1536022 306 + 0.395425
NA LIC12894 conserved hypothetical proteinchromosome I CDS3495061 2175 - 0.408276
NA LIC12781 conserved hypothetical proteinchromosome I CDS3384911 915 - 0.326776
NA LIC12046 hypothetical proteinchromosome I CDS2465784 741 - 0.260459
NA LIC10513 transposase, IS3chromosome I CDS617188 951 - 0.356467
NA LIC12914 conserved hypothetical proteinchromosome I CDS3539984 921 + 0.396308
NA LIC10482 conserved hypothetical proteinchromosome I CDS559027 582 + 0.357388
NA LIC11032 transposase, ISlin1chromosome I CDS1271749 915 + 0.370492
NA LIC12822 conserved hypothetical proteinchromosome I CDS3425034 768 - 0.377604
NA LIC11347 transposase, IS1501chromosome I CDS1661993 306 - 0.421569
NA LIC10503 transposase, IS3chromosome I CDS599481 1353 - 0.356984
NA LIC13159 transposase, ISlin1chromosome I CDS3870289 309 + 0.417476
NA LIC12510 ATPasechromosome I CDS3039028 1272 - 0.398585
NA LIC10263 transposase, ISlin1chromosome I CDS301007 396 + 0.429293
NA LIC12277 conserved hypothetical proteinchromosome I CDS2749190 729 - 0.342936
NA LIC10564 single-strand DNA-binding proteinchromosome I CDS690659 354 + 0.403955
NA LIC13062 transposase, ISlin1chromosome I CDS3738385 606 + 0.361386
NA LIC10343 integrase/recombinasechromosome I CDS389169 603 + 0.325041
NA LIC20134 conserved hypothetical proteinchromosome II CDS157308 372 - 0.330645
NA LIC11724 conserved hypothetical proteinchromosome I CDS2099731 507 + 0.280079
NA LIC10420 DNA helicase IIchromosome I CDS478459 1302 - 0.332565
NA LIC13166 conserved hypothetical proteinchromosome I CDS3875998 921 + 0.402823
NA LIC10980 transposase, IS1501chromosome I CDS1186497 846 - 0.390071
NA LIC10884 transposase, ISlin1chromosome I CDS1070404 396 + 0.424242
NA LIC10784 transposase, IS1501chromosome I CDS952496 339 - 0.389381
NA LIC11450 transposase, ISlin1chromosome I CDS1787773 246 - 0.390244
NA LIC10505 nuclease-like proteinchromosome I CDS601854 978 + 0.328221
NA LIC11173 conserved hypothetical proteinchromosome I CDS1442153 1500 + 0.386667
NA LIC11514 conserved hypothetical proteinchromosome I CDS1870683 369 + 0.360434
NA LIC11564 conserved hypothetical proteinchromosome I CDS1925052 351 + 0.327635
NA LIC12189 conserved hypothetical proteinchromosome I CDS2642892 528 - 0.363636
NA LIC11309 conserved hypothetical proteinchromosome I CDS1616487 1251 - 0.365308
NA LIC10887 transposase, ISlin1chromosome I CDS1072177 450 - 0.382222
NA LIC13212 conserved hypothetical proteinchromosome I CDS3940560 837 - 0.348865
NA LIC13374 transposase, IS1500chromosome I CDS4137038 306 + 0.385621
NA LIC12588 ATP-dependent DNA helicasechromosome I CDS3134244 2025 - 0.381235
NA LIC11323 methyltransferase DNA modification enzymechromosome I CDS1632977 1152 + 0.345486
NA LIC11848 conserved hypothetical proteinchromosome I CDS2242765 831 + 0.392298
NA LIC11473 transposase, ISlin1chromosome I CDS1820719 309 - 0.420712
NA LIC13481 conserved hypothetical proteinchromosome I CDS4257126 810 - 0.32963
ada LIC13402 methylated-DNA--protein-cysteine methyltransferase transcription regulatorchromosome I CDS4171728 831 - 0.350181
alkA LIC12362 3-methyladenine DNA glycosylasechromosome I CDS2862671 642 + 0.361371
dead LIC13230 ATP-dependent RNA helicasechromosome I CDS3965016 1566 + 0.386335
devR LIC10936 fruiting body developmental proteinchromosome I CDS1127708 840 - 0.482143
dinP LIC13052 DNA polymerase IVchromosome I CDS3724436 1095 + 0.360731
dnaA LIC10001 chromosomal replication initiator proteinchromosome I CDS292 1332 + 0.316066
dnaB LIC12109 replicative DNA helicasechromosome I CDS2551407 1329 - 0.410083
dnaC LIC13165 DNA replication protein DnaCchromosome I CDS3874453 858 - 0.39627
dnaE LIC10222 DNA polymerase III alpha subunitchromosome I CDS252892 3522 + 0.390687
dnaG LIC11702 DNA primasechromosome I CDS2069283 1797 - 0.376183
dnaN LIC10002 DNA polymerase III beta subunitchromosome I CDS3279 1122 + 0.323529
dnaX LIC13474 DNA polymerase III gamma subunitchromosome I CDS4248234 1440 + 0.357639
dshA LIC12756 DshAchromosome I CDS3353542 1053 - 0.312441
gyrA LIC10006 DNA gyrase subunit Achromosome I CDS8624 2505 + 0.363273
gyrB LIC13348 DNA gyrase subunit Bchromosome I CDS4104748 2136 + 0.374064
hepA LIC13220 ATP-dependent RNA helicasechromosome I CDS3951011 2847 - 0.354759
lig LIC13282 NAD dependent DNA ligasechromosome I CDS4024999 2046 - 0.371457
mfd LIC11455 transcription-repair coupling factorchromosome I CDS1792408 3561 + 0.364504
mutL LIC12514 DNA mismatch repair proteinchromosome I CDS3041807 1794 - 0.379599
mutS LIC11774 DNA mismatch repair proteinchromosome I CDS2164144 2547 + 0.348253
mutT LIC12191 mutator proteinchromosome I CDS2644632 435 - 0.347126
mutY LIC11614 A/G specific adenine glycosylasechromosome I CDS1975744 1128 + 0.345745
nth LIC11759 endonuclease IIIchromosome I CDS2151822 699 - 0.369099
nudH LIC13180 (Di)nucleoside polyphosphate hydrolasechromosome I CDS3891862 489 - 0.372188
phr LIC11339 deoxyribodipyrimidine photolyasechromosome I CDS1651973 1551 + 0.337202
polA LIC10586 DNA polymerase Ichromosome I CDS711562 2754 - 0.388163
priA LIC11551 primosomal protein N'chromosome I CDS1913874 1944 + 0.367798
recA LIC11745 recombinase Achromosome I CDS2130507 1101 + 0.389646
recB LIC12686 exodeoxyribonuclease V beta chainchromosome I CDS3256875 3102 - 0.336557
recC LIC12688 exodeoxyribonuclease v gamma chainchromosome I CDS3260005 3399 - 0.343336
recD LIC12685 exodeoxyribonuclease v alpha chainchromosome I CDS3255040 1854 - 0.333333
recF LIC10003 DNA repair and genetic recombination proteinchromosome I CDS5062 1098 + 0.304189
recG LIC11791 ATP-dependent DNA helicasechromosome I CDS2182516 1710 - 0.384211
recJ LIC11066 single-stranded DNA exonucleasechromosome I CDS1317692 1932 - 0.374224
recN LIC11620 DNA repair proteinchromosome I CDS1982343 1707 + 0.391916
recO LIC12104 RecOchromosome I CDS2544910 783 - 0.375479
recQ LIC12961 ATP-dependent DNA helicasechromosome I CDS3594524 1896 - 0.365506
recR LIC13476 RecRchromosome I CDS4250006 606 + 0.363036
rhlE LIC10738 ATP-dependent RNA helicasechromosome I CDS899573 1623 + 0.378928
rnhB LIC11560 ribonuclease HIIchromosome I CDS1921387 696 + 0.343391
ruvA LIC11148 DNA helicase subunit Achromosome I CDS1416118 639 + 0.319249
ruvB LIC12811 holliday junction DNA helicase proteinchromosome I CDS3416206 1026 - 0.39961
ruvC LIC12885 putative holliday junction endodeoxyribonuclease proteinchromosome I CDS3487108 573 - 0.371728
splB LIC10195 photoproduct lyasechromosome I CDS224064 1038 - 0.32659
ssb LIC12112 single-stranded DNA binding proteinchromosome I CDS2553535 453 - 0.408389
tag LIC13064 3-methyl-adenine DNA glycosylase Ichromosome I CDS3739853 594 - 0.335017
topA LIC12080 DNA topoisomerase I proteinchromosome I CDS2517693 1842 - 0.343648
uvrA LIC11717 nucleotide excision repair subunit A UVRABCchromosome I CDS2088124 2847 - 0.391289
uvrB LIC12941 nucleotide excision repair subunit Bchromosome I CDS3570065 2001 - 0.392304
uvrC LIC11756 nucleotide excision repair subunit Cchromosome I CDS2148564 1830 - 0.35082
uvrD LIC11624 ATP-dependent DNA helicasechromosome I CDS1988168 2199 + 0.363802
uvrD2 LIC11732 atp-dependent DNA helicasechromosome I CDS2110228 2019 + 0.347202
xerC LIC11599 putative integrase/recombinase proteinchromosome I CDS1958542 999 + 0.341341
xerD LIC11479 putative integrase/recombinase proteinchromosome I CDS1827759 897 + 0.347826
xseA LIC11591 exodeoxyribonuclease VII large subunitchromosome I CDS1950228 1269 - 0.377463
yoaA LIC12019 ATP-dependent helicasechromosome I CDS2432866 1977 + 0.371775