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2024-05-06 23:52:51

Gene list

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COG category: Replication, recombination and repair
Organism: Vibrio vulnificus CMCP6, CMCP6

Number of genes found: 230

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio vulnificus CMCP6, CMCP6
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA VV10825 DNA repair protein RadCchromosome I CDS832874 645 - 0.474419
NA VV20755 Predicted endonuclease containing a URI domainchromosome II CDS809217 192 - 0.432292
NA VV20004 FOG: Transposasechromosome II CDS2910 1203 + 0.458853
NA VV20655 Integrasechromosome II CDS704987 495 + 0.456566
NA VV11797 ATP-dependent exoDNAse alpha subunitchromosome I CDS1794540 2115 + 0.516785
NA VV11533 Endonuclease Ichromosome I CDS1505399 696 - 0.478448
NA VV10528 Single-stranded DNA-specific exonucleasechromosome I CDS528522 1686 - 0.510083
NA VV11589 Mismatch repair ATPasechromosome I CDS1560516 2535 - 0.500197
NA VV20635 ATPase involved in DNA repairchromosome II CDS684823 1482 + 0.481781
NA VV10386 Putative transposasechromosome I CDS367974 297 - 0.461279
NA VV10939 ATP-dependent RNA helicase RhlBchromosome I CDS945638 1308 + 0.49159
NA VV13001 DNA polymerase III, delta prime subunitchromosome I CDS3068973 906 - 0.451435
NA VV12322 Conserved hypothetical proteinchromosome I CDS2350041 531 + 0.451977
NA VV11083 ATP-dependent DNA helicase Repchromosome I CDS1077169 435 + 0.475862
NA VV20136 Superfamily II DNA and RNA helicasechromosome II CDS141685 1305 - 0.475862
NA VV12550 Transposase and inactivated derivativeschromosome I CDS2589542 171 + 0.508772
NA VV11220 Uracil-DNA glycosylasechromosome I CDS1200331 594 - 0.489899
NA VV10968 Transposase and inactivated derivativeschromosome I CDS973588 411 + 0.43309
NA VV10170 SeqA proteinchromosome I CDS160825 534 - 0.425094
NA VV21157 Predicted polymerasechromosome II CDS1252993 1674 - 0.510753
NA VV11528 Predicted endonuclease involved in recombinationchromosome I CDS1501021 423 - 0.479905
NA VV10469 DNA recombination-dependent growth factor Cchromosome I CDS468130 897 + 0.460424
NA VV12130 DNA topoisomerase Ichromosome I CDS2129343 2625 + 0.470857
NA VV21546 ATP-dependent RNA helicase, DEAD box familychromosome II CDS1693992 1344 + 0.46875
NA VV12005 Recombinational DNA repair proteinchromosome I CDS2001424 603 + 0.507463
NA VV12161 Holliday junction DNA helicase RuvBchromosome I CDS2165943 336 + 0.494048
NA VV12988 Nucleotidyltransferase/DNA polymerase involved in DNA repairchromosome I CDS3052890 1350 + 0.463704
NA VV10388 Type IIA topoisomerase, A subunitchromosome I CDS368835 405 + 0.348148
NA VV10610 MutT/nudix family proteinchromosome I CDS623691 636 - 0.457547
NA VV10078 Site-specific recombinase XerCchromosome I CDS76679 705 - 0.510638
NA VV12901 ATPase involved in DNA repairchromosome I CDS2969234 1377 - 0.454611
NA VV11238 DNA polymerase III, epsilon subunitchromosome I CDS1217770 636 - 0.514151
NA VV12657 ATP-dependent DNA ligasechromosome I CDS2702280 822 - 0.487835
NA VV10997 Recombinational DNA repair ATPasechromosome I CDS1001581 1080 - 0.465741
NA VV12375 Integration host factor, alpha subunitchromosome I CDS2411452 288 + 0.444444
NA VV21492 DNA-damage-inducible protein Jchromosome II CDS1626223 285 + 0.424561
NA VV12048 Integrasechromosome I CDS2041187 1323 - 0.385488
NA VV20128 Type IIA topoisomerase, B subunitchromosome II CDS130044 423 - 0.50591
NA VV12235 ISSod7chromosome I CDS2247579 1338 - 0.456652
NA VV10915 Transposase and inactivated derivativeschromosome I CDS927392 477 - 0.412998
NA VV10914 Transposase and inactivated derivativeschromosome I CDS926833 534 - 0.462547
NA VV12106 Exodeoxyribonuclease IIIchromosome I CDS2108976 807 - 0.473358
NA VV20959 ATPase involved in DNA repairchromosome II CDS1033944 474 + 0.449367
NA VV10998 DNA polymerase III, beta chainchromosome I CDS1002670 1101 - 0.503179
NA VV12476 Transposase and inactivated derivativeschromosome I CDS2521398 969 - 0.447884
NA VV10275 DNA polymerase III, delta subunitchromosome I CDS266142 1026 + 0.442495
NA VV11887 DNA polymerase III, epsilon subunitchromosome I CDS1881130 732 + 0.504098
NA VV10821 Formamidopyrimidine-DNA glycosylasechromosome I CDS830522 810 - 0.495062
NA VV21680 NTP pyrophosphohydrolasechromosome II CDS1832823 519 + 0.470135
NA VV12517 Transposase and inactivated derivativeschromosome I CDS2558691 969 - 0.446852
NA VV11392 Replicative DNA helicasechromosome I CDS1374690 1488 + 0.491263
NA VV10606 Type IIA topoisomerase, B subunitchromosome I CDS619690 1881 - 0.506114
NA VV10122 Site-specific recombinase XerDchromosome I CDS108408 1047 - 0.48233
NA VV13055 DNA polymerase elongation subunitchromosome I CDS3124714 2370 + 0.470886
NA VV21341 Mg-dependent DNasechromosome II CDS1479523 843 + 0.349941
NA VV12111 Primosomal replication protein N''chromosome I CDS2112350 546 - 0.454212
NA VV20695 Transposasechromosome II CDS748979 294 + 0.462585
NA VV10996 DNA gyrase, subunit Bchromosome I CDS999145 2418 - 0.492969
NA VV11874 Ribonuclease HIIchromosome I CDS1868328 624 + 0.495192
NA VV10590 Predicted endonucleasechromosome I CDS606034 369 + 0.425474
NA VV12159 Holliday junction DNA helicase RuvAchromosome I CDS2164637 615 + 0.479675
NA VV20624 ATPase involved in DNA repairchromosome II CDS677128 819 - 0.483516
NA VV11875 DNA polymerase III, alpha subunitchromosome I CDS1869113 3432 + 0.49359
NA VV12003 DNA polymerase III, gamma/tau subunitschromosome I CDS1998796 2205 + 0.511111
NA VV20693 Transposasechromosome II CDS747120 153 - 0.444444
NA VV12800 HrpA-like helicasechromosome I CDS2859309 2346 - 0.510656
NA VV12520 Type IIA topoisomerase, A subunitchromosome I CDS2563351 1137 + 0.319261
NA VV10949 DNA helicase IIchromosome I CDS955036 2175 - 0.516782
NA VV12796 Superfamily II DNA and RNA helicasechromosome I CDS2855925 393 + 0.450382
NA VV11427 Excinuclease ATPase subunitchromosome I CDS1408070 2823 - 0.489196
NA VV12466 ATPase involved in DNA replicationchromosome I CDS2505317 3771 + 0.336516
NA VV10206 NAD-dependent DNA ligasechromosome I CDS195547 2010 - 0.485572
NA VV11567 Recombinational DNA repair proteinchromosome I CDS1538200 732 + 0.489071
NA VV12947 ATPase-like proteinchromosome I CDS3009982 1290 - 0.492248
NA VV12456 Transposase and inactivated derivativeschromosome I CDS2497173 969 - 0.446852
NA VV13148 Predicted methylated DNA-protein cysteine methyltransferasechromosome I CDS3223059 303 + 0.435644
NA VV10385 Putative transposasechromosome I CDS367394 507 - 0.489152
NA VV10005 Transposasechromosome I CDS5621 345 - 0.466667
NA VV21406 Endonuclease Ichromosome II CDS1552254 1632 - 0.498162
NA VV11796 ATP-dependent exoDNAse beta subunitchromosome I CDS1790923 3621 + 0.518089
NA VV20626 Methyl-accepting chemotaxis proteinchromosome II CDS678476 1161 - 0.521102
NA VV10391 Nucleotidyltransferase/DNA polymerase involved in DNA repairchromosome I CDS370651 1257 + 0.411297
NA VV20080 ATPase involved in DNA repairchromosome II CDS81687 3066 + 0.480757
NA VV12548 Transposase and inactivated derivativeschromosome I CDS2587190 969 - 0.453044
NA VV10814 Putative KDO kinase WavCchromosome I CDS823656 711 - 0.464135
NA VV20667 Integrasechromosome II CDS725319 240 + 0.416667
NA VV21154 Serine/threonine protein kinasechromosome II CDS1249825 1047 + 0.404011
NA VV11459 Superfamily II DNA/RNA helicasechromosome I CDS1445786 2910 + 0.512715
NA VV11214 NTP pyrophosphohydrolasechromosome I CDS1196712 786 + 0.479644
NA VV11475 DNA polymerase III, chi subunitchromosome I CDS1463637 450 - 0.462222
NA VV12508 NTP pyrophosphohydrolasechromosome I CDS2549368 408 + 0.42402
NA VV20106 NTP pyrophosphohydrolase including oxidative damage repair enzymeschromosome II CDS110576 456 - 0.449561
NA VV20682 Transposasechromosome II CDS737993 183 - 0.453552
NA VV10092 A/G-specific DNA glycosylasechromosome I CDS87113 279 - 0.55914
NA VV12969 FOG: Transposasechromosome I CDS3032187 1338 + 0.458146
NA VV13000 Mg-dependent DNasechromosome I CDS3068216 624 - 0.450321
NA VV20932 NTP pyrophosphohydrolasechromosome II CDS1009590 402 + 0.497512
NA VV10854 RecG-like helicasechromosome I CDS862176 1074 + 0.528864
NA VV11795 Exonuclease V gamma subunitchromosome I CDS1787123 3489 + 0.503583
NA VV13130 Topoisomerase IAchromosome I CDS3200791 1971 - 0.505327
NA VV20294 Mg-dependent DNasechromosome II CDS318237 372 - 0.545699
NA VV11886 Ribonuclease HIchromosome I CDS1880594 468 - 0.485043
NA VV12989 DNA polymerase III, alpha subunitchromosome I CDS3054255 3075 + 0.476423
NA VV20054 NTP pyrophosphohydrolasechromosome II CDS55098 516 - 0.463178
NA VV20618 Transposasechromosome II CDS672373 285 - 0.4
NA VV13182 Putative transposasechromosome I CDS3260213 207 + 0.429952
NA VV20446 Serine/threonine protein kinasechromosome II CDS484385 1938 + 0.447368
NA VV10631 DNA primasechromosome I CDS646226 1764 + 0.484694
NA VV10855 RecG-like helicasechromosome I CDS863197 1062 + 0.538606
NA VV12384 Conserved hypothetical proteinchromosome I CDS2419206 690 - 0.427536
NA VV21047 FOG: Transposasechromosome II CDS1126941 1203 + 0.458853
NA VV12160 Holliday junction DNA helicase RuvBchromosome I CDS2165273 711 + 0.488045
NA VV11430 Single-stranded DNA-binding proteinchromosome I CDS1413040 540 + 0.522222
NA VV21208 3-methyladenine DNA glycosylasechromosome II CDS1305481 1386 + 0.502164
NA VV21209 Methylated DNA-protein cysteine methyltransferasechromosome II CDS1306868 486 + 0.495885
NA VV11515 A/G-specific DNA glycosylasechromosome I CDS1490357 945 - 0.495238
NA VV10999 DNA replication initiator DnaAchromosome I CDS1003831 1380 - 0.494203
NA VV20122 Superfamily I DNA and RNA helicasechromosome II CDS121069 2073 + 0.474674
NA VV13053 Nuclease subunit of the excinuclease complexchromosome I CDS3121879 1767 - 0.462366
NA VV11052 DNA topoisomerase I-related proteinchromosome I CDS1054565 570 + 0.482456
NA VV20623 ATPase involved in DNA repairchromosome II CDS675258 1860 - 0.475806
NA VV12462 Integrasechromosome I CDS2501650 1209 + 0.4756
NA VV11129 Site-specific recombinase XerCchromosome I CDS1129320 951 + 0.532072
NA VV10903 Putative Mg-dependent DNasechromosome I CDS917568 771 + 0.464332
NA VV20236 Predicted ATP-dependent endonuclease of the OLD familychromosome II CDS264272 1632 - 0.472426
NA VV12040 ATPase involved in DNA repairchromosome I CDS2032183 792 - 0.425505
NA VV12565 Type IIA topoisomerase, B subunitchromosome I CDS2602512 345 + 0.42029
NA VV20661 Endonuclease Ichromosome II CDS715165 351 + 0.478632
NA VV12844 DNA or RNA helicase of superfamily IIchromosome I CDS2910600 819 + 0.4884
NA VV13192 Putative transposasechromosome I CDS3266401 207 - 0.429952
NA VV12451 Transposase and inactivated derivativeschromosome I CDS2489379 969 - 0.446852
NA VV12317 Conserved hypothetical proteinchromosome I CDS2341622 705 - 0.485106
NA VV12039 ATPase involved in DNA repairchromosome I CDS2031118 525 + 0.375238
NA VV10313 Exonuclease VII small subunitchromosome I CDS303521 243 + 0.44856
NA VV10382 Predicted ATP-dependent endonuclease of the OLD familychromosome I CDS364956 1593 - 0.371626
NA VV11830 DNA-damage-inducible protein Pchromosome I CDS1824907 1029 + 0.482021
NA VV10530 Site-specific recombinase XerDchromosome I CDS531125 918 - 0.485839
NA VV20608 Superfamily II DNA and RNA helicasechromosome II CDS663874 1530 + 0.50719
NA VV11074 Transposase-like proteinchromosome I CDS1066354 534 - 0.466292
NA VV10017 DNA uptake proteinchromosome I CDS18143 276 - 0.391304
NA VV10895 Putative ATPase involved in DNA repairchromosome I CDS908112 489 - 0.468303
NA VV12539 Transposase and inactivated derivativeschromosome I CDS2581753 630 - 0.466667
NA VV12873 3-methyladenine DNA glycosylasechromosome I CDS2939421 570 - 0.459649
NA VV11153 N6-adenine-specific methylasechromosome I CDS1148779 498 - 0.493976
NA VV12955 ATPase involved in DNA repairchromosome I CDS3019573 765 + 0.426144
NA VV11274 FOG: Transposasechromosome I CDS1258769 1206 + 0.456053
NA VV20079 DNA repair exonucleasechromosome II CDS80545 1134 + 0.472663
NA VV12980 Bacterial nucleoid DNA-binding proteinchromosome I CDS3046907 282 - 0.453901
NA VV21063 Superfamily II DNA and RNA helicasechromosome II CDS1142219 1239 - 0.494754
NA VV20968 Superfamily II DNA and RNA helicasechromosome II CDS1041516 1197 + 0.477026
NA VV12298 Conserved hypothetical proteinchromosome I CDS2317525 555 - 0.401802
NA VV12024 Phosphatidylinositol kinase and protein kinase of the PI-3 kinase familychromosome I CDS2015847 567 - 0.389771
NA VV20660 Unknownchromosome II CDS714796 279 + 0.476703
NA VV12987 RecA/RadA recombinasechromosome I CDS3052156 684 + 0.469298
NA VV11292 DNA mismatch repair enzymechromosome I CDS1276899 1995 + 0.496241
NA VV10141 Rad3-related DNA helicasechromosome I CDS125523 1920 - 0.492188
NA VV21151 Transposasechromosome II CDS1247959 978 - 0.451943
NA VV12078 Transcription-repair coupling factorchromosome I CDS2070694 3462 - 0.5026
NA VV11231 Factor for inversion stimulation Fis, transcriptional activatorchromosome I CDS1210577 297 - 0.414141
NA VV11831 DNA helicasechromosome I CDS1825964 1920 - 0.483333
NA VV11095 Serine/threonine protein kinasechromosome I CDS1094281 1335 - 0.510861
NA VV20185 Superfamily I DNA and RNA helicasechromosome II CDS205402 333 + 0.384384
NA VV12157 Crossover junction endodeoxyribonuclease RuvCchromosome I CDS2162470 522 + 0.501916
NA VV13194 Transposasechromosome I CDS3267385 306 - 0.401961
NA VV12245 DNA polymerase III, epsilon subunitchromosome I CDS2259215 717 - 0.499303
NA VV12343 ATP-dependent helicase HrpAchromosome I CDS2371956 3933 + 0.491991
NA VV10301 5'-3' exonucleasechromosome I CDS293989 780 + 0.49359
NA VV10770 Predicted endonucleasechromosome I CDS773834 285 - 0.396491
NA VV12529 Transposase and inactivated derivativeschromosome I CDS2572495 969 - 0.446852
NA VV20654 Transposasechromosome II CDS704474 186 + 0.505376
NA VV10019 Bacterial nucleoid DNA-binding proteinchromosome I CDS20614 294 - 0.459184
NA VV10969 Transposase and inactivated derivativeschromosome I CDS974024 534 + 0.468165
NA VV10372 Phage integrasechromosome I CDS355728 1359 + 0.433407
NA VV11960 ATPase involved in DNA repairchromosome I CDS1951138 501 + 0.477046
NA VV12403 Phosphatidylinositol kinase and protein kinase of the PI-3 kinase familychromosome I CDS2440646 654 + 0.377676
NA VV13103 Ribonuclease Tchromosome I CDS3171403 654 + 0.478593
NA VV10534 Superfamily II DNA and RNA helicasechromosome I CDS535282 1227 + 0.502037
NA VV11050 Smf proteinchromosome I CDS1052956 1104 + 0.502717
NA VV11388 Primosomal replication protein Nchromosome I CDS1372734 303 + 0.455446
NA VV11359 Primosomal protein N'chromosome I CDS1337936 2205 - 0.487982
NA VV11650 ATP-dependent helicase HrpBchromosome I CDS1616147 2496 + 0.514824
NA VV20917 DNA polymerase III, epsilon subunitchromosome II CDS990620 738 + 0.48103
NA VV13200 Transposase and inactivated derivativeschromosome I CDS3272312 237 - 0.392405
NA VV10943 ATP-dependent DNA helicase RecQchromosome I CDS949782 1836 - 0.510893
NA VV11224 Bacterial nucleoid DNA-binding proteinchromosome I CDS1203918 273 + 0.446886
NA VV12761 Zn-finger domain associated with topoisomerase type Ichromosome I CDS2826247 666 - 0.435435
NA VV12635 Predicted N6-adenine-specific DNA methylasechromosome I CDS2671701 1002 - 0.466068
NA VV12188 Helicase-related proteinchromosome I CDS2193101 2907 - 0.463708
NA VV10605 Type IIA topoisomerase, A subunitchromosome I CDS617401 2286 - 0.49825
NA VV20663 ATP-dependent exoDNAse, alpha subunitchromosome II CDS715970 5787 + 0.448764
NA VV10568 NTP pyrophosphohydrolasechromosome I CDS581954 402 - 0.445274
NA VV11385 Site-specific DNA methylasechromosome I CDS1370390 828 + 0.457729
NA VV20147 Superfamily II DNA and RNA helicasechromosome II CDS161946 1926 + 0.487539
NA VV11518 3-methyladenine DNA glycosylasechromosome I CDS1493395 627 + 0.526316
NA VV20168 FOG: Transposasechromosome II CDS189158 1323 + 0.456538
NA VV20619 Transposasechromosome II CDS673033 564 + 0.468085
NA VV11591 RecA/RadA recombinasechromosome I CDS1563798 1050 + 0.471429
NA VV11082 ATP-dependent DNA helicase Repchromosome I CDS1075586 1587 + 0.490863
NA VV20227 Superfamily II DNA and RNA helicasechromosome II CDS256126 1257 + 0.470167
NA VV12551 Transposase and inactivated derivativeschromosome I CDS2589837 852 + 0.474178
NA VV13092 Excinuclease ABC subunit Bchromosome I CDS3159345 2031 - 0.474643
NA VV10520 MutT/nudix family proteinchromosome I CDS520018 519 - 0.441233
NA VV20711 Integrasechromosome II CDS764863 1032 + 0.468023
NA VV11717 DNA polymerase III, psi subunitchromosome I CDS1703529 402 + 0.450249
NA VV21003 DNA polymerase III, alpha subunitchromosome II CDS1082890 615 + 0.492683
NA VV10541 Endonuclease IVchromosome I CDS541512 882 - 0.459184
NA VV13099 Endonuclease IIIchromosome I CDS3168680 642 + 0.475078
NA VV21543 Deoxyribodipyrimidine photolyasechromosome II CDS1691003 1416 + 0.501412
NA VV11193 Transposase and inactivated derivativeschromosome I CDS1175895 534 - 0.466292
NA VV21480 Transposasechromosome II CDS1614685 1338 + 0.458146
NA VV12792 Exonuclease Ichromosome I CDS2853093 1422 + 0.483122
NA VV10367 DNA repair protein RecNchromosome I CDS351386 1665 + 0.464264
NA VV11722 Mg-dependent DNasechromosome I CDS1709776 798 + 0.467419
NA VV21539 Transposasechromosome II CDS1686605 1524 - 0.471129
NA VV11700 Transposase and inactivated derivativeschromosome I CDS1684323 630 + 0.434921
NA VV13199 Transposase and inactivated derivativeschromosome I CDS3271707 447 - 0.409396
NA VV10865 MutT/nudix family proteinchromosome I CDS874568 555 + 0.482883
NA VV11075 Shewanella oneidensis MR-1ISSod10chromosome I CDS1066913 327 - 0.425076
NA VV12113 ATP-dependent helicasechromosome I CDS2113720 2112 - 0.458807
NA VV20382 Superfamily II DNA and RNA helicasechromosome II CDS402117 1284 - 0.482087
NA VV12263 Guanylate cyclase-related proteinchromosome I CDS2278870 558 + 0.46595
NA VV13039 Type IIA topoisomerase, A subunitchromosome I CDS3106070 183 - 0.497268
NA VV21643 Alkylated DNA repair proteinchromosome II CDS1794293 612 - 0.496732
NA VV10901 DNA polymerase Ichromosome I CDS912763 2796 - 0.477825
NA VV12262 MutT/nudix family proteinchromosome I CDS2278176 627 - 0.45933
NA VV10420 Exonuclease VII, large subunitchromosome I CDS415209 1332 + 0.481231
NA VV12401 Super-integron integrase IntIAchromosome I CDS2438377 927 - 0.420712
NA VV10540 Uracil DNA glycosylasechromosome I CDS540530 681 - 0.468429
NA VV10521 DNA mismatch repair proteinchromosome I CDS521155 684 + 0.476608
NA VV13038 Type IIA topoisomerase, A subunitchromosome I CDS3103540 2559 - 0.488863