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2024-04-29 11:13:08

Gene list

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COG category: Replication, recombination and repair
Organism: Aquifex aeolicus VF5, VF5

Number of genes found: 100

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Aquifex aeolicus VF5, VF5
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
aa05 unknown proteinece1 CDS2254 921 + 0.393051
aa09 integrase proteinece1 CDS5877 948 + 0.399789
aa19 putative proteinece1 CDS15620 339 - 0.368732
aa22 putative proteinece1 CDS18282 519 + 0.393064
aa24 putative proteinece1 CDS19683 366 - 0.415301
aa40 putative proteinece1 CDS37072 966 - 0.403727
apfA AP4A hydrolasechromosome CDS96893 405 + 0.427161
aq_041 putative proteinchromosome CDS26274 312 - 0.416667
aq_058 putative proteinchromosome CDS37923 351 + 0.393162
aq_1006 hypothetical proteinchromosome CDS695010 2937 + 0.413687
aq_1037 putative proteinchromosome CDS719238 444 - 0.391892
aq_1104 putative proteinchromosome CDS770996 1053 + 0.420703
aq_1106 hypothetical proteinchromosome CDS772733 1104 + 0.443841
aq_1137 putative proteinchromosome CDS794867 873 + 0.449026
aq_1191 hypothetical proteinchromosome CDS838862 984 - 0.397358
aq_1286 putative proteinchromosome CDS909166 846 - 0.437352
aq_1356 putative proteinchromosome CDS963309 435 + 0.402299
aq_1391 hypothetical proteinchromosome CDS988669 966 + 0.403727
aq_1498 hypothetical proteinchromosome CDS1065593 396 - 0.441919
aq_1526 hypothetical proteinchromosome CDS1082598 918 + 0.418301
aq_1596 putative proteinchromosome CDS1123763 684 - 0.362573
aq_1640 hypothetical proteinchromosome CDS1151528 966 - 0.403727
aq_173 putative proteinchromosome CDS106547 744 - 0.397849
aq_1761 putative proteinchromosome CDS1239007 2037 - 0.418262
aq_1768 hypothetical proteinchromosome CDS1245528 774 + 0.373385
aq_182 putative proteinchromosome CDS111355 747 - 0.336011
aq_1909 putative proteinchromosome CDS1344366 930 + 0.41828
aq_1953 putative proteinchromosome CDS1373638 459 - 0.396514
aq_2086 putative proteinchromosome CDS1468059 357 - 0.361345
aq_2108 putative proteinchromosome CDS1485176 633 + 0.418641
aq_251 hypothetical proteinchromosome CDS160629 681 - 0.431718
aq_369 hypothetical proteinchromosome CDS245338 951 - 0.375394
aq_370 hypothetical proteinchromosome CDS246281 534 - 0.410112
aq_373 putative proteinchromosome CDS250518 660 - 0.418182
aq_374 putative proteinchromosome CDS251158 1074 - 0.39013
aq_378 hypothetical proteinchromosome CDS253592 1362 - 0.297357
aq_380 putative proteinchromosome CDS254950 1122 - 0.31016
aq_381 putative proteinchromosome CDS256087 900 - 0.34
aq_382 putative proteinchromosome CDS257019 888 - 0.288288
aq_383 putative proteinchromosome CDS257872 744 - 0.336022
aq_384 putative proteinchromosome CDS258857 402 - 0.375622
aq_385 putative proteinchromosome CDS259248 888 - 0.368243
aq_386 putative proteinchromosome CDS260132 978 - 0.311861
aq_388 putative proteinchromosome CDS263585 906 + 0.344371
aq_548 hypothetical proteinchromosome CDS372081 567 - 0.472663
aq_693 putative proteinchromosome CDS471539 1245 - 0.421687
aq_716 putative proteinchromosome CDS489875 1395 - 0.396416
aq_791 putative proteinchromosome CDS546645 492 + 0.439024
aq_820 putative proteinchromosome CDS565822 597 - 0.368509
atpG2 ATP synthase F1 gamma subunitchromosome CDS122663 1182 + 0.399323
deaD ATP-dependent RNA helicase DeaDchromosome CDS417224 882 - 0.427438
dinG ATP-dependent helicase (DinG family)chromosome CDS234590 1929 + 0.424572
dnaA chromosome replication initiator protein DnaAchromosome CDS208642 1200 - 0.4175
dnaB replicative DNA helicasechromosome CDS1049037 1407 + 0.453447
dnaC DNA replication protein DnaCchromosome CDS627868 708 - 0.443503
dnaE DNA polymerase III alpha subunitchromosome CDS697943 3486 - 0.465003
dnaG DNA primasechromosome CDS1062135 1497 - 0.420174
dnaN DNA polymerase III beta chainchromosome CDS1325853 1092 + 0.462454
dnaQ DNA polymerase III epsilon subunitchromosome CDS643713 609 - 0.426929
dnaX DNA polymerase III gamma subunitchromosome CDS1303882 1422 + 0.443038
dpbF DNA polymerase beta familychromosome CDS1012941 1746 - 0.45819
dplF N-terminus of phage SPO1 DNA polymerasechromosome CDS1189596 588 + 0.420068
gyrA DNA gyrase A subunitchromosome CDS677905 2235 + 0.447427
gyrB gyrase Bchromosome CDS710781 2379 - 0.469105
helX DNA helicasechromosome CDS1448818 1593 - 0.396108
himA DNA binding protein HUchromosome CDS1057616 285 - 0.364912
ihfB integration host factor beta subunitchromosome CDS1530746 303 + 0.409241
lig DNA ligase (ATP dependent)chromosome CDS990701 1758 - 0.465301
ligA DNA ligase (NAD dependent)chromosome CDS433166 2163 + 0.443828
mutL DNA mismatch repair protein MutLchromosome CDS1113601 1278 + 0.437402
mutS1 DNA mismatch repair protein MutSchromosome CDS200713 2580 + 0.443023
mutS2 DNA mismatch repair protein MutSchromosome CDS875699 2289 - 0.436435
mutY1 endonuclease IIIchromosome CDS183890 642 + 0.422118
mutY2 endonuclease IIIchromosome CDS105912 663 - 0.374057
mutY3 endonuclease IIIchromosome CDS333390 699 + 0.420601
nfo deoxyribonuclease IVchromosome CDS1142009 849 - 0.424028
npr neutral proteasechromosome CDS1040657 1749 - 0.399085
nrdF ribonucleotide reductase beta chainchromosome CDS1070796 2091 - 0.423242
nucI thermococcal nuclease homologchromosome CDS486617 519 - 0.423892
ogt O-6-methylguanine-DNA-alkyltransferasechromosome CDS1064073 606 - 0.349835
pol DNA polymerase I 3'-5' exo domainchromosome CDS1141158 870 + 0.391954
polA DNA polymerase I (PolI)chromosome CDS1384011 1725 + 0.445797
radC DNA repair protein RadCchromosome CDS1131408 696 - 0.445402
recA recombination protein RecAchromosome CDS1515870 1038 + 0.44027
recG ATP-dependent DNA helicase RecGchromosome CDS1442417 2379 - 0.430853
recJ single-strand-DNA-specific exonuclease RecJchromosome CDS1519140 1617 + 0.431664
recN recombination protein RecNchromosome CDS381742 1563 - 0.415867
recR recombination protein RecRchromosome CDS1054026 636 - 0.444969
rep ATP-dependent DNA helicase REPchromosome CDS547898 2010 - 0.433333
rnhB RNase HIIchromosome CDS1374521 591 + 0.445008
rpsS ribosomal protein S19chromosome CDS6340 561 + 0.45098
sbcD ATP-dependent dsDNA exonucleasechromosome CDS1327901 1140 + 0.436842
ssb single stranded DNA-binding proteinchromosome CDS40735 444 + 0.432432
stpK ser/thr protein kinasechromosome CDS392044 816 - 0.447304
topA topoisomerase Ichromosome CDS448782 1623 + 0.436845
topG1 reverse gyrasechromosome CDS814948 3534 + 0.447368
topG2 reverse gyrasechromosome CDS610406 3441 - 0.456553
uvrA repair excision nuclease subunit Achromosome CDS465627 2781 + 0.480403
uvrB repair excision nuclease subunit Bchromosome CDS1305589 1992 + 0.443775
uvrC repair excision nuclease subunit Cchromosome CDS1497725 1701 + 0.43739