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2024-05-04 06:09:02

Gene list

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COG category: Replication, recombination and repair
Organism: Clostridium tetani E88, Massachusetts

Number of genes found: 173

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Clostridium tetani E88, Massachusetts
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CTC00830 transposasechromosome CDS879378 921 + 0.279045
NA CTC00623 transposasechromosome CDS643663 543 + 0.296501
NA CTC00621 transposasechromosome CDS642709 399 + 0.253133
NA CTC00686 ATP-dependent nuclease subunit Bchromosome CDS703402 3474 + 0.275187
NA CTC00788 transposasechromosome CDS834976 921 - 0.279045
NA CTC00714 ATP-dependent nuclease subunit Achromosome CDS737202 3444 + 0.261034
NA CTC00657 DNA/RNA helicasechromosome CDS673859 2493 + 0.251504
NA CTC00764 membrane-associated proteinchromosome CDS801093 1515 + 0.237624
NA CTC00622 transposasechromosome CDS643213 390 + 0.269231
NA CTC00692 DNA helicase IIchromosome CDS713469 2163 - 0.242718
NA CTC00761 membrane-associated proteinchromosome CDS797735 1539 + 0.233918
CTC00062 DNA polymerase, bacteriophage-typechromosome CDS4027 522 + 0.272031
CTC00069 predicted NADH pyrophosphatasechromosome CDS14871 528 - 0.30303
CTC00075 DNA polymerase III subunits gamma and tauchromosome CDS21830 1659 - 0.286317
CTC00090 DNA gyrase subunit Achromosome CDS43745 2442 - 0.313268
CTC00091 DNA gyrase subunit Bchromosome CDS46198 1914 - 0.320794
CTC00093 DNA polymerase III, beta chainchromosome CDS49861 1104 - 0.263587
CTC00108 single-strand binding proteinchromosome CDS65777 438 + 0.344749
CTC00114 replicative DNA helicasechromosome CDS72416 1335 + 0.323595
CTC00137 transposasechromosome CDS96112 921 + 0.279045
CTC00176 transposasechromosome CDS131408 921 + 0.279045
CTC00194 transcription-repair coupling factorchromosome CDS149078 3093 + 0.293243
CTC00221 DNA polymerase III delta subunitchromosome CDS187729 969 + 0.231166
CTC00223 transposasechromosome CDS190156 921 - 0.279045
CTC00242 DNA polymerase, bacteriophage-typechromosome CDS210458 567 + 0.338624
CTC00246 DNA primasechromosome CDS215620 588 + 0.309524
CTC00264 DNA helicasechromosome CDS236036 4059 + 0.255235
CTC00270 putative spore coat proteinchromosome CDS246444 771 + 0.225681
CTC00273 spore coat proteinchromosome CDS249564 1014 + 0.282051
CTC00313 hypothetical proteinchromosome CDS295823 651 + 0.248848
CTC00322 exodeoxyribonuclease V alpha chainchromosome CDS304873 2232 + 0.296595
CTC00323 conserved proteinchromosome CDS307085 1065 + 0.226291
CTC00333 conserved proteinchromosome CDS319306 1536 + 0.244792
CTC00355 endonuclease IIIchromosome CDS340305 639 + 0.312989
CTC00363 transposasechromosome CDS349604 990 + 0.274747
CTC00387 putative adenine-specific DNA methyltransferasechromosome CDS380624 843 + 0.270463
CTC00389 transposasechromosome CDS382957 1023 - 0.307918
CTC00403 DNA topoisomerase Ichromosome CDS396524 2193 + 0.303694
CTC00420 methyltransferasechromosome CDS415386 1143 + 0.326334
CTC00437 putative DNA polymerase IVchromosome CDS434468 1059 + 0.275732
CTC00449 transposasechromosome CDS446581 921 - 0.279045
CTC00496 conserved proteinchromosome CDS505633 960 - 0.254167
CTC00516 transposasechromosome CDS525598 921 - 0.279045
CTC00552 hypothetical proteinchromosome CDS572773 456 + 0.217105
CTC00900 spore photoproduct lyasechromosome CDS952968 1023 + 0.258065
CTC00967 conserved proteinchromosome CDS1033223 825 + 0.249697
CTC00984 DNA helicase IIchromosome CDS1052080 2097 + 0.227468
CTC01030 DNA-3-methyladenine glycosylasechromosome CDS1101063 612 + 0.310458
CTC01048 ATPase associated with chromosome architecture/replicationchromosome CDS1117281 1284 + 0.297508
CTC01056 DNA integration/recombination proteinchromosome CDS1126830 417 + 0.311751
CTC01067 site-specific recombinasechromosome CDS1138054 1509 - 0.266402
CTC01074 phage-related proteinchromosome CDS1143708 1344 + 0.286458
CTC01075 phage-related proteinchromosome CDS1145053 807 + 0.309789
CTC01077 phage proteinchromosome CDS1146049 879 + 0.30603
CTC01085 phage terminase small subunitchromosome CDS1153679 924 + 0.301948
CTC01098 hypothetical proteinchromosome CDS1165343 327 + 0.2263
CTC01106 conserved proteinchromosome CDS1172442 1893 + 0.242472
CTC01116 DNA polymerase III alpha subunitchromosome CDS1183756 1143 + 0.242345
CTC01141 transposasechromosome CDS1206919 597 - 0.303183
CTC01142 conserved proteinchromosome CDS1208850 744 + 0.24328
CTC01143 conserved proteinchromosome CDS1209608 1344 + 0.24256
CTC01144 conserved proteinchromosome CDS1210958 909 + 0.276128
CTC01145 conserved proteinchromosome CDS1211894 1083 + 0.247461
CTC01147 conserved proteinchromosome CDS1215272 558 + 0.252688
CTC01148 maturase-related proteinchromosome CDS1215847 993 + 0.247734
CTC01149 conserved proteinchromosome CDS1219614 1965 + 0.277863
CTC01158 hypothetical proteinchromosome CDS1233525 945 + 0.258201
CTC01167 hypothetical proteinchromosome CDS1247092 315 + 0.231746
CTC01206 hypothetical proteinchromosome CDS1291140 750 + 0.277333
CTC01218 primosomal protein Nchromosome CDS1304821 2235 + 0.266667
CTC01232 methyltransferasechromosome CDS1321261 558 + 0.310036
CTC01255 ribonuclease HIIchromosome CDS1343746 816 + 0.270833
CTC01256 endonucleasechromosome CDS1344580 369 - 0.249322
CTC01258 SMF protein, putative DNA processing chain Achromosome CDS1346721 1086 + 0.251381
CTC01259 DNA topoisomerase Ichromosome CDS1347856 2091 + 0.295552
CTC01271 DNA polymerase III, alpha chainchromosome CDS1360643 4284 + 0.293884
CTC01296 putative integrase, recombinasechromosome CDS1393171 987 + 0.267477
CTC01368 mitochondrial ATP-dependent RNA helicase suv3 precursorchromosome CDS1474665 1782 - 0.275533
CTC01406 putative transposasechromosome CDS1518084 921 - 0.279045
CTC01413 methylated-DNA--protein-cysteinemethyltransferasechromosome CDS1525054 471 + 0.284501
CTC01414 hypothetical proteinchromosome CDS1525542 687 + 0.272198
CTC01436 hypothetical proteinchromosome CDS1549977 408 + 0.230392
CTC01463 conserved protein, possibly maturase-relatedchromosome CDS1580854 999 - 0.258258
CTC01464 hypothetical proteinchromosome CDS1581862 492 - 0.243902
CTC01466 hypothetical proteinchromosome CDS1585019 771 - 0.249027
CTC01469 conserved proteinchromosome CDS1588510 693 - 0.248196
CTC01499 ATP-dependent RNA helicasechromosome CDS1625990 1446 - 0.297372
CTC01532 integrase/recombinasechromosome CDS1657784 912 - 0.287281
CTC01553 hypothetical proteinchromosome CDS1677494 624 - 0.24359
CTC01557 DNA integration/recombination proteinchromosome CDS1682210 423 - 0.300236
CTC01558 phage-related proteinchromosome CDS1682965 429 - 0.300699
CTC01567 DNA integration/recombination proteinchromosome CDS1695271 1032 - 0.26938
CTC01578 exodeoxyribonuclease VII large subunitchromosome CDS1707049 1191 - 0.282116
CTC01608 conserved proteinchromosome CDS1728507 648 - 0.268519
CTC01610 exodeoxyribonuclease IIIchromosome CDS1730290 783 - 0.277139
CTC01634 conserved proteinchromosome CDS1752628 486 - 0.23251
CTC01681 single-strand DNA binding proteinchromosome CDS1795134 369 - 0.303523
CTC01694 hypothetical proteinchromosome CDS1803881 945 - 0.262434
CTC01716 hypothetical proteinchromosome CDS1830297 333 - 0.264264
CTC01736 conserved proteinchromosome CDS1846942 1581 - 0.283365
CTC01745 endonuclease IVchromosome CDS1859302 819 + 0.283272
CTC01766 DNA gyrase subunit Achromosome CDS1876451 2880 - 0.278125
CTC01767 DNA gyrase subunit Bchromosome CDS1879343 1956 - 0.310327
CTC01809 transposasechromosome CDS1920215 1146 - 0.268761
CTC01836 DNA topoisomerase Ichromosome CDS1946790 2166 - 0.288089
CTC01850 SWF/SNF family helicasechromosome CDS1963926 3282 - 0.260207
CTC01856 ATP-dependent RNA helicasechromosome CDS1973130 1161 + 0.282515
CTC01878 transposasechromosome CDS1996450 1104 - 0.285326
CTC01910 DNA repair helicase rad25chromosome CDS2032848 2982 - 0.263246
CTC01911 reverse transcriptasechromosome CDS2036218 1158 - 0.279793
CTC01913 hypothetical proteinchromosome CDS2037687 1809 - 0.297955
CTC01914 hypothetical proteinchromosome CDS2039485 2988 - 0.27008
CTC01934 putative transposasechromosome CDS2057830 330 + 0.275758
CTC01935 hypothetical proteinchromosome CDS2058191 546 - 0.250916
CTC01939 hypothetical proteinchromosome CDS2062572 996 - 0.252008
CTC01967 hypothetical proteinchromosome CDS2092849 666 + 0.222222
CTC01990 putative transposasechromosome CDS2115510 921 + 0.279045
CTC01999 ATP-dependent RNA helicasechromosome CDS2128461 1575 + 0.292064
CTC02011 DNA primasechromosome CDS2139416 1770 - 0.274576
CTC02041 DNA polymerase III, delta subunitchromosome CDS2171813 1035 - 0.251208
CTC02050 come operon protein 1chromosome CDS2182591 567 - 0.276896
CTC02057 hypothetical proteinchromosome CDS2189545 543 - 0.220994
CTC02103 DNA polymerase Ichromosome CDS2237704 2649 - 0.274821
CTC02127 hypothetical proteinchromosome CDS2260748 432 - 0.30787
CTC02133 phage-related proteinchromosome CDS2266736 471 - 0.318471
CTC02141 hypothetical proteinchromosome CDS2272722 408 - 0.272059
CTC02142 hypothetical proteinchromosome CDS2273410 897 - 0.316611
CTC02146 phage-related proteinchromosome CDS2275304 921 - 0.287731
CTC02149 phage-related proteinchromosome CDS2277927 750 - 0.296
CTC02152 DNA integration/recombination proteinchromosome CDS2279888 1500 + 0.275333
CTC02184 ATP-dependent RNA helicasechromosome CDS2310305 1113 + 0.290207
CTC02214 conserved proteinchromosome CDS2335144 618 + 0.254045
CTC02230 putative tellurium resistance proteinchromosome CDS2350016 1650 + 0.200606
CTC02296 single-strand DNA binding proteinchromosome CDS2421607 645 - 0.274419
CTC02333 hypothetical proteinchromosome CDS2473165 333 - 0.249249
CTC02334 putative transposasechromosome CDS2473618 840 - 0.234524
CTC02394 NAD-dependent DNA ligasechromosome CDS2531475 2007 - 0.295466
CTC02395 DNA helicasechromosome CDS2533510 1920 - 0.263542
CTC02418 8-oxoguanine DNA glycosylasechromosome CDS2557907 936 - 0.266026
CTC02433 conserved proteinchromosome CDS2573651 669 + 0.269058
CTC02460 ATP-dependent DNA helicase repchromosome CDS2609418 2133 - 0.255977
CTC02491 DNA polymerase III, alpha chainchromosome CDS2643543 3501 - 0.303628
CTC02497 excinuclease ABC subunit Cchromosome CDS2652793 1869 - 0.289995
CTC02503 excinuclease ABC subunit Achromosome CDS2659509 2739 - 0.313618
CTC02504 excinuclease ABC subunit Bchromosome CDS2662421 1986 - 0.295569
dnaA chromosomal replication initiator protein dnaAchromosome CDS51225 1029 - 0.296404
dnaC DNA replication protein dnaCchromosome CDS82777 990 - 0.259596
dnaD DNA replication protein dnaDchromosome CDS83763 975 - 0.270769
hexA DNA mismatch repair protein hexAchromosome CDS2282112 1566 - 0.275862
hexA DNA mismatch repair protein hexAchromosome CDS198823 1812 + 0.255519
mutL DNA mismatch repair protein mutLchromosome CDS1398000 1863 - 0.273752
mutS DNA mismatch repair protein mutSchromosome CDS1399874 2646 - 0.277022
mutS DNA mismatch repair protein mutSchromosome CDS2396980 2361 - 0.301144
mutT mutator mutT proteinchromosome CDS2032327 420 + 0.304762
mutT phosphohydrolase (mutT family protein)chromosome CDS1049554 624 + 0.278846
mutT phosphohydrolase (mutT family protein)chromosome CDS1105159 516 + 0.27907
parB chromosome partitioning parB family proteinchromosome CDS2054930 1074 - 0.325885
radC DNA repair protein radCchromosome CDS2205807 687 - 0.279476
recA recA proteinchromosome CDS1383544 1053 + 0.330484
recF recFproteinchromosome CDS48425 1113 - 0.250674
recG ATP-dependent DNA helicase recGchromosome CDS1319119 2052 + 0.274366
recJ single-stranded-DNA-specific exonuclease recJchromosome CDS1857165 1836 - 0.271786
recJ single-stranded-DNA-specific exonuclease recJchromosome CDS2325235 846 - 0.261229
recN DNA repair protein recNchromosome CDS1698805 1698 - 0.261484
recO DNA repair protein recOchromosome CDS2147935 546 - 0.274725
recQ ATP-dependent DNA helicase recQchromosome CDS2219892 2121 - 0.286186
recR recombination protein recRchromosome CDS20790 597 - 0.323283
recT recT proteinchromosome CDS2274496 807 - 0.30855
ruvA holliday junction DNA helicase ruvAchromosome CDS2334417 594 - 0.286195
ruvB holliday junction DNA helicase ruvBchromosome CDS2333375 1038 - 0.309249
sbcC exonuclease sbcCchromosome CDS600416 3138 + 0.254939
sbcD exonuclease sbcDchromosome CDS599240 1176 + 0.283163
tatD deoxyribonuclease tatDchromosome CDS213496 774 + 0.29199